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Search of human proteins with 239753057
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753057 PREDICTED: hypothetical protein XP_002345334 [Homo
sapiens]
(212 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753057 PREDICTED: hypothetical protein XP_002345334 [Homo ... 442 e-124
gi|239747608 PREDICTED: hypothetical protein [Homo sapiens] 442 e-124
gi|239741483 PREDICTED: hypothetical protein XP_002342212 [Homo ... 442 e-124
gi|239756293 PREDICTED: hypothetical protein [Homo sapiens] 35 0.047
gi|239750869 PREDICTED: hypothetical protein XP_002347589 [Homo ... 35 0.047
gi|239745232 PREDICTED: hypothetical protein XP_002343394 [Homo ... 35 0.047
gi|153252068 testes-specific heterogenous nuclear ribonucleoprot... 33 0.14
gi|67782311 superkiller viralicidic activity 2-like homolog [Hom... 31 0.68
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi... 31 0.89
gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi... 31 0.89
gi|169172087 PREDICTED: hypothetical protein [Homo sapiens] 30 1.2
gi|239751818 PREDICTED: hypothetical protein XP_002348008 [Homo ... 30 1.5
gi|239746309 PREDICTED: hypothetical protein XP_002343728 [Homo ... 30 1.5
gi|58331144 proline rich region 18 [Homo sapiens] 30 2.0
gi|71896723 ceramide kinase-like isoform b [Homo sapiens] 29 2.6
gi|115527080 metastasis associated protein [Homo sapiens] 29 3.4
gi|18104993 protein tyrosine phosphatase, non-receptor type 6 is... 28 4.4
gi|130979214 adrenocortical dysplasia homolog isoform 3 [Homo sa... 28 4.4
gi|130978956 adrenocortical dysplasia homolog isoform 1 [Homo sa... 28 4.4
gi|130978962 adrenocortical dysplasia homolog isoform 2 [Homo sa... 28 4.4
gi|57863281 Meis1, myeloid ecotropic viral integration site 1 ho... 28 4.4
gi|50428940 mediator complex subunit 25 [Homo sapiens] 28 5.7
gi|194239725 eukaryotic translation elongation factor 1 delta is... 28 5.7
gi|194239723 eukaryotic translation elongation factor 1 delta is... 28 5.7
gi|25453474 eukaryotic translation elongation factor 1 delta iso... 28 5.7
gi|103472003 forkhead box O4 [Homo sapiens] 28 7.5
gi|22538453 phosphatidylinositol glycan anchor biosynthesis, cla... 28 7.5
gi|18375660 protein tyrosine phosphatase, non-receptor type 7 is... 27 9.8
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 27 9.8
gi|22094135 DOT1-like, histone H3 methyltransferase [Homo sapiens] 27 9.8
>gi|239753057 PREDICTED: hypothetical protein XP_002345334 [Homo
sapiens]
Length = 212
Score = 442 bits (1137), Expect = e-124
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MHNPHLTPGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALL 60
MHNPHLTPGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALL
Sbjct: 1 MHNPHLTPGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALL 60
Query: 61 HPHVGQADHLGPGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAHTLISQ 120
HPHVGQADHLGPGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAHTLISQ
Sbjct: 61 HPHVGQADHLGPGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAHTLISQ 120
Query: 121 EARGLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFRVTVALSSHLPIVPKVQGVQLQLGL 180
EARGLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFRVTVALSSHLPIVPKVQGVQLQLGL
Sbjct: 121 EARGLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFRVTVALSSHLPIVPKVQGVQLQLGL 180
Query: 181 PKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL 212
PKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL
Sbjct: 181 PKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL 212
>gi|239747608 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 442 bits (1137), Expect = e-124
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MHNPHLTPGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALL 60
MHNPHLTPGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALL
Sbjct: 1 MHNPHLTPGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALL 60
Query: 61 HPHVGQADHLGPGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAHTLISQ 120
HPHVGQADHLGPGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAHTLISQ
Sbjct: 61 HPHVGQADHLGPGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAHTLISQ 120
Query: 121 EARGLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFRVTVALSSHLPIVPKVQGVQLQLGL 180
EARGLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFRVTVALSSHLPIVPKVQGVQLQLGL
Sbjct: 121 EARGLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFRVTVALSSHLPIVPKVQGVQLQLGL 180
Query: 181 PKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL 212
PKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL
Sbjct: 181 PKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL 212
>gi|239741483 PREDICTED: hypothetical protein XP_002342212 [Homo
sapiens]
Length = 212
Score = 442 bits (1137), Expect = e-124
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MHNPHLTPGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALL 60
MHNPHLTPGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALL
Sbjct: 1 MHNPHLTPGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALL 60
Query: 61 HPHVGQADHLGPGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAHTLISQ 120
HPHVGQADHLGPGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAHTLISQ
Sbjct: 61 HPHVGQADHLGPGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAHTLISQ 120
Query: 121 EARGLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFRVTVALSSHLPIVPKVQGVQLQLGL 180
EARGLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFRVTVALSSHLPIVPKVQGVQLQLGL
Sbjct: 121 EARGLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFRVTVALSSHLPIVPKVQGVQLQLGL 180
Query: 181 PKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL 212
PKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL
Sbjct: 181 PKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL 212
>gi|239756293 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 35.0 bits (79), Expect = 0.047
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 105 QGLRGLPAGAHTLISQEARGLQHPVLG--PLHPLQVNVHLLAAAAGALGHWCFRVTVALS 162
Q L L A A ++QE +QH ++ LHPL H AA A AL H +
Sbjct: 74 QALGLLLAQAAERLAQETVHVQHLLVRGVALHPL----HQRAARADALQHSI--QAAQPT 127
Query: 163 SHL---PIVPKVQGVQ-LQLGLPKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL 212
HL +VP+V +Q L L P + ADQL+G G + AQ+ HL
Sbjct: 128 GHLLVVALVPRVHSLQQLALLSPHVSYHLAHALADQLLGLGTRAAQLADGRVHL 181
>gi|239750869 PREDICTED: hypothetical protein XP_002347589 [Homo
sapiens]
Length = 354
Score = 35.0 bits (79), Expect = 0.047
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 105 QGLRGLPAGAHTLISQEARGLQHPVLG--PLHPLQVNVHLLAAAAGALGHWCFRVTVALS 162
Q L L A A ++QE +QH ++ LHPL H AA A AL H +
Sbjct: 154 QALGLLLAQAAERLAQETVHVQHLLVRGVALHPL----HQRAARADALQHSI--QAAQPT 207
Query: 163 SHL---PIVPKVQGVQ-LQLGLPKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL 212
HL +VP+V +Q L L P + ADQL+G G + AQ+ HL
Sbjct: 208 GHLLVVALVPRVHSLQQLALLSPHVSYHLAHALADQLLGLGTRAAQLADGRVHL 261
>gi|239745232 PREDICTED: hypothetical protein XP_002343394 [Homo
sapiens]
Length = 274
Score = 35.0 bits (79), Expect = 0.047
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 105 QGLRGLPAGAHTLISQEARGLQHPVLG--PLHPLQVNVHLLAAAAGALGHWCFRVTVALS 162
Q L L A A ++QE +QH ++ LHPL H AA A AL H +
Sbjct: 74 QALGLLLAQAAERLAQETVHVQHLLVRGVALHPL----HQRAARADALQHSI--QAAQPT 127
Query: 163 SHL---PIVPKVQGVQ-LQLGLPKPGWRPLRGKADQLVGAGRQRAQMLPLHRHL 212
HL +VP+V +Q L L P + ADQL+G G + AQ+ HL
Sbjct: 128 GHLLVVALVPRVHSLQQLALLSPHVSYHLAHALADQLLGLGTRAAQLADGRVHL 181
>gi|153252068 testes-specific heterogenous nuclear ribonucleoprotein
G-T [Homo sapiens]
Length = 392
Score = 33.5 bits (75), Expect = 0.14
Identities = 36/106 (33%), Positives = 43/106 (40%), Gaps = 22/106 (20%)
Query: 22 DPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALLHPHVGQADHLGPGPASL---- 77
DP G + S DGY+ R + EP RG A P G+ H G +S+
Sbjct: 204 DPYLGPRDEGYSSRDGYSSRDYREP-------RGFA----PSPGEYTHRDYGHSSVRDDC 252
Query: 78 -----LDADDHGQRVSLRGDALSRPQKR-PLEGQG-LRGLPAGAHT 116
D D +G R GD LSR R P E G LRG G T
Sbjct: 253 PLRGYSDRDGYGGRDRDYGDHLSRGSHREPFESYGELRGAAPGRGT 298
>gi|67782311 superkiller viralicidic activity 2-like homolog [Homo
sapiens]
Length = 1246
Score = 31.2 bits (69), Expect = 0.68
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 129 VLGPLHPLQVNVHLLAAAAGALGHW-CFRVTVALSSHLP-----IVPKVQGVQLQLGLPK 182
VL P PL ++ L A G GHW + A S LP P +Q QL L
Sbjct: 8 VLPPPDPL--DLPLRAVELGCTGHWELLNLPGAPESSLPHGLPPCAPDLQQEAEQLFLSS 65
Query: 183 PGWRPLRG 190
P W PL G
Sbjct: 66 PAWLPLHG 73
>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 547
Score = 30.8 bits (68), Expect = 0.89
Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 3/101 (2%)
Query: 8 PGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALLHPHVGQA 67
PGL + D P PV G L G R PP RT G G
Sbjct: 244 PGLAAAAAARDSEPGPVPGAGGCGEDRL-GSQPRPENGPPGSHRTASGRGLRRGDSEGGV 302
Query: 68 DH-LGPGPASLLDADDHGQRVSLRGDALSRPQKRP-LEGQG 106
+ +GP SLL D + RG A P + P L+G G
Sbjct: 303 NRGIGPSRVSLLAPDKKRLNNAPRGSAAPGPPRGPRLQGGG 343
>gi|113429443 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 492
Score = 30.8 bits (68), Expect = 0.89
Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 3/101 (2%)
Query: 8 PGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALLHPHVGQA 67
PGL + D P PV G L G R PP RT G G
Sbjct: 244 PGLAAAAAARDSEPGPVPGAGGCGEDRL-GSQPRPENGPPGSHRTASGRGLRRGDSEGGV 302
Query: 68 DH-LGPGPASLLDADDHGQRVSLRGDALSRPQKRP-LEGQG 106
+ +GP SLL D + RG A P + P L+G G
Sbjct: 303 NRGIGPSRVSLLAPDKKRLNNAPRGSAAPGPPRGPRLQGGG 343
>gi|169172087 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 30.4 bits (67), Expect = 1.2
Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 14/101 (13%)
Query: 57 AALLHPHVGQADHLG-PGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAH 115
AAL P G+ G P P++ L ++S D R Q+ P EG+GLR P GA
Sbjct: 37 AALRRPRGGRCRRGGDPRPSAHL-------KLSAASDW--RAQRGPGEGRGLRHWPRGAP 87
Query: 116 TLISQEARGLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFR 156
+ R P P P Q A G W R
Sbjct: 88 VTVPAARR----PAPAPRGPKQPGCCAALAGGDTNGEWILR 124
>gi|239751818 PREDICTED: hypothetical protein XP_002348008 [Homo
sapiens]
Length = 195
Score = 30.0 bits (66), Expect = 1.5
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 72 PGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQG 106
PG ASL +D+ + + +GDA S PQ+ PL G G
Sbjct: 120 PGAASLRRSDE--RFLQQKGDAASAPQRAPLAGGG 152
>gi|239746309 PREDICTED: hypothetical protein XP_002343728 [Homo
sapiens]
Length = 195
Score = 30.0 bits (66), Expect = 1.5
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 72 PGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQG 106
PG ASL +D+ + + +GDA S PQ+ PL G G
Sbjct: 120 PGAASLRRSDE--RFLQQKGDAASAPQRAPLAGGG 152
>gi|58331144 proline rich region 18 [Homo sapiens]
Length = 295
Score = 29.6 bits (65), Expect = 2.0
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 90 RGDALSRPQKRPLEGQGLRGLPAGAHTLISQEARGLQHPVLGP 132
RG S P P GQG R P GA L GLQ P L P
Sbjct: 188 RGGPASDPDAPPTAGQGRRAPPPGAQLLHG----GLQVPQLSP 226
>gi|71896723 ceramide kinase-like isoform b [Homo sapiens]
Length = 558
Score = 29.3 bits (64), Expect = 2.6
Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 10/139 (7%)
Query: 9 GLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALLHPHV---- 64
G+++ V + ++ ++ K +++ DG R+ W + + L P V
Sbjct: 198 GIKTDVTIMEYEGHALSLLKECELQGFDGGHRKPLFAIHWSVQRLFTGMQTLEPSVVCVG 257
Query: 65 GQADHLGPGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAHTLISQEARG 124
G A LL A + + D + P + L L +PAG+ +++ G
Sbjct: 258 GDGSASEVAHALLLRAQ---KNAGMETDRILTPVRAQLP---LGLIPAGSTNVLAHSLHG 311
Query: 125 LQHPVLGPLHPLQVNVHLL 143
+ H + LH + +V L+
Sbjct: 312 VPHVITATLHIIMGHVQLV 330
>gi|115527080 metastasis associated protein [Homo sapiens]
Length = 715
Score = 28.9 bits (63), Expect = 3.4
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 6 LTPGLRSRVVVEDFSPDPVTGQKHTQVKSLDGYTRRLWLEPPWHERTIRGTAALLHPHVG 65
LTP + V+ + SP + + + Q +DG ++ L P RG A + G
Sbjct: 563 LTPA-KVAPVINNGSPTILGKRSYEQHNGVDGNMKKRLLMPS------RGLA-----NHG 610
Query: 66 QADHLGPGPASLLDADDHGQRVSL-RGDALSRPQKR 100
QA H+GP LL+ + +V L RG +L ++R
Sbjct: 611 QARHMGPSRNLLLNGKSYPTKVRLIRGGSLPPVKRR 646
>gi|18104993 protein tyrosine phosphatase, non-receptor type 6
isoform 3 [Homo sapiens]
Length = 624
Score = 28.5 bits (62), Expect = 4.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 101 PLEGQGLRGLPAGAHTLISQEARGLQHPVLGPLHP 135
P+ G RGLP ++S + L PVL PLHP
Sbjct: 571 PVRRGGQRGLPVPGPPVLSPDLHQL--PVLAPLHP 603
>gi|130979214 adrenocortical dysplasia homolog isoform 3 [Homo
sapiens]
Length = 528
Score = 28.5 bits (62), Expect = 4.4
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 96 RPQKRPLEGQGLRGLPAGAHTLISQEARGLQHPV--LGPLHPLQVNVHLLAAAAGALGHW 153
R Q R + G+GL P A L G P GPLHPL V V + + L W
Sbjct: 39 RAQARGVRGRGLLLRPRPAKELPLPRKGGAWAPAGNPGPLHPLGVAVGMAGSGRLVLRPW 98
Query: 154 CFRVTVALSSHLPIVPK 170
+ L S P P+
Sbjct: 99 IRE--LILGSETPSSPR 113
>gi|130978956 adrenocortical dysplasia homolog isoform 1 [Homo
sapiens]
Length = 544
Score = 28.5 bits (62), Expect = 4.4
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 96 RPQKRPLEGQGLRGLPAGAHTLISQEARGLQHPV--LGPLHPLQVNVHLLAAAAGALGHW 153
R Q R + G+GL P A L G P GPLHPL V V + + L W
Sbjct: 39 RAQARGVRGRGLLLRPRPAKELPLPRKGGAWAPAGNPGPLHPLGVAVGMAGSGRLVLRPW 98
Query: 154 CFRVTVALSSHLPIVPK 170
+ L S P P+
Sbjct: 99 IRE--LILGSETPSSPR 113
>gi|130978962 adrenocortical dysplasia homolog isoform 2 [Homo
sapiens]
Length = 541
Score = 28.5 bits (62), Expect = 4.4
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 96 RPQKRPLEGQGLRGLPAGAHTLISQEARGLQHPV--LGPLHPLQVNVHLLAAAAGALGHW 153
R Q R + G+GL P A L G P GPLHPL V V + + L W
Sbjct: 39 RAQARGVRGRGLLLRPRPAKELPLPRKGGAWAPAGNPGPLHPLGVAVGMAGSGRLVLRPW 98
Query: 154 CFRVTVALSSHLPIVPK 170
+ L S P P+
Sbjct: 99 IRE--LILGSETPSSPR 113
>gi|57863281 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 1 [Homo sapiens]
Length = 421
Score = 28.5 bits (62), Expect = 4.4
Identities = 38/134 (28%), Positives = 49/134 (36%), Gaps = 24/134 (17%)
Query: 69 HLG-PGPASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPAGAHTLISQEARGLQH 127
HLG PGP+S A G S +GD L P G G + QE R +
Sbjct: 214 HLGTPGPSSGGLASQSGDNSSDQGDGLDTSVASPSSG--------GEDEDLDQERRRNKK 265
Query: 128 PVLGPLHPLQVNVHLLAAAAGALGHWCFRVTVALSSHLPIVPKVQGVQLQLGLPKPGWRP 187
+ P A + W F+ ++ S P++P V L LG P PG R
Sbjct: 266 RGIFP-----------KVATNIMRAWLFQ-HLSRRSEAPVLP---DVCLGLGSPSPGPRW 310
Query: 188 LRGKADQLVGAGRQ 201
R GRQ
Sbjct: 311 ARPWGSDCGRPGRQ 324
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 28.1 bits (61), Expect = 5.7
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Query: 72 PGPASLLDADDHGQRVSLRGDALSRPQKR---PLEGQGLRGL-PAGAHTLISQEARGLQH 127
P P +L + G LR L+ P + P L L P GA L+ +GL
Sbjct: 629 PPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQ 688
Query: 128 PVLGP--LHP 135
P LGP LHP
Sbjct: 689 PQLGPPLLHP 698
>gi|194239725 eukaryotic translation elongation factor 1 delta
isoform 3 [Homo sapiens]
Length = 646
Score = 28.1 bits (61), Expect = 5.7
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 7 TPGLRSRVVVEDFSPDP---VTGQKHTQVKSLDGYTRRLWLEPPWHERTIRG 55
TP +V V D + P V GQ + SL R +WLE P ++ RG
Sbjct: 196 TPNTGQQVAVPDLAHQPSPPVNGQP--PLGSLQALVREVWLEKPRYDAAERG 245
>gi|194239723 eukaryotic translation elongation factor 1 delta
isoform 1 [Homo sapiens]
Length = 647
Score = 28.1 bits (61), Expect = 5.7
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 7 TPGLRSRVVVEDFSPDP---VTGQKHTQVKSLDGYTRRLWLEPPWHERTIRG 55
TP +V V D + P V GQ + SL R +WLE P ++ RG
Sbjct: 196 TPNTGQQVAVPDLAHQPSPPVNGQP--PLGSLQALVREVWLEKPRYDAAERG 245
>gi|25453474 eukaryotic translation elongation factor 1 delta
isoform 1 [Homo sapiens]
Length = 647
Score = 28.1 bits (61), Expect = 5.7
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 7 TPGLRSRVVVEDFSPDP---VTGQKHTQVKSLDGYTRRLWLEPPWHERTIRG 55
TP +V V D + P V GQ + SL R +WLE P ++ RG
Sbjct: 196 TPNTGQQVAVPDLAHQPSPPVNGQP--PLGSLQALVREVWLEKPRYDAAERG 245
>gi|103472003 forkhead box O4 [Homo sapiens]
Length = 505
Score = 27.7 bits (60), Expect = 7.5
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 114 AHTLISQEARG---LQHP-VLGPLHPLQVNVHLLAAAAGALGHWCFRVTVALSSHL 165
+H+L+S+ LQHP V GPLH ++ A + G CF + AL + L
Sbjct: 315 SHSLLSRSGLSGFSLQHPGVTGPLHTYSSSLFSPAEGPLSAGEGCFSSSQALEALL 370
>gi|22538453 phosphatidylinositol glycan anchor biosynthesis, class
Q isoform 1 [Homo sapiens]
Length = 760
Score = 27.7 bits (60), Expect = 7.5
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 97 PQKRPLEGQGLRGLPAGAHTLISQEARGLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFR 156
PQ+ +EG GLP+G+ + E P P HPL + A+ G
Sbjct: 677 PQQPQVEGWSPWGLPSGSALAVGVEGPCQDEPP-SPRHPLAPSAEQHPASGGLKQ----S 731
Query: 157 VTVALSSHLPIVPKVQGVQLQL 178
+T S P +P+ GV L++
Sbjct: 732 LTPVPSGPGPSLPEPHGVYLRM 753
>gi|18375660 protein tyrosine phosphatase, non-receptor type 7
isoform 2 [Homo sapiens]
Length = 399
Score = 27.3 bits (59), Expect = 9.8
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 17/115 (14%)
Query: 52 TIRGTAALLHPHVGQADHLGPGPASLLDADDHGQRVSLR------GDALSRP--QKRPLE 103
+ R T+ L P +G A HL S++ A HG R + G A+++P +K P +
Sbjct: 20 SFRQTSWLSEPPLGPAPHL-----SMVQA--HGGRSRAQPLTLSLGAAMTQPPPEKTPAK 72
Query: 104 GQGLRGLPAGAHTLISQEAR--GLQHPVLGPLHPLQVNVHLLAAAAGALGHWCFR 156
G++ + + R G P+ P +V +H L A L W +
Sbjct: 73 KHVRLQERRGSNVALMLDVRSLGAVEPICSVNTPREVTLHFLRTAGHPLTRWALQ 127
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 27.3 bits (59), Expect = 9.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 97 PQKRPLEGQGLRGLPAGAHTLISQEARGLQHPVLGPLHP 135
PQ PL+ G P G L + PVLGP+HP
Sbjct: 4269 PQTGPLQELGAGPRPQGPPRLPAPPGALSTGPVLGPVHP 4307
>gi|22094135 DOT1-like, histone H3 methyltransferase [Homo sapiens]
Length = 1537
Score = 27.3 bits (59), Expect = 9.8
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 55 GTAALLHPHVGQADHLGPG--PASLLDADDHGQRVSLRGDALSRPQKRPLEGQGLRGLPA 112
G+ A+ G L PG PA+L ++ G + G S PQ L Q LPA
Sbjct: 941 GSVAISGALAGSPASLTPGAEPATLDESSSSGSLFATVGSRSSTPQHPLLLAQPRNSLPA 1000
Query: 113 G-AHTLISQEARG 124
AH L S G
Sbjct: 1001 SPAHQLSSSPRLG 1013
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.139 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,760,685
Number of Sequences: 37866
Number of extensions: 493131
Number of successful extensions: 1122
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1115
Number of HSP's gapped (non-prelim): 34
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.