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Search of human proteins with 239752224
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752224 PREDICTED: hypothetical protein XP_002348163 [Homo
sapiens]
(284 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752224 PREDICTED: hypothetical protein XP_002348163 [Homo ... 589 e-169
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 56 4e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 47 2e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 47 2e-05
gi|60460889 Myb protein P42POP [Homo sapiens] 46 3e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 46 3e-05
gi|219802034 nuclear factor related to kappaB binding protein is... 46 4e-05
gi|23346420 nuclear factor related to kappaB binding protein iso... 46 4e-05
gi|153281158 dual specificity phosphatase 8 [Homo sapiens] 46 4e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 6e-05
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 45 6e-05
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 45 6e-05
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 44 1e-04
gi|33286436 gametogenetin [Homo sapiens] 44 1e-04
gi|238859557 regulatory factor X1 [Homo sapiens] 44 2e-04
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 44 2e-04
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 44 2e-04
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 44 2e-04
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 43 3e-04
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 43 3e-04
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 43 3e-04
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 43 4e-04
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 43 4e-04
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 42 5e-04
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 42 5e-04
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 42 6e-04
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap... 42 6e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 42 6e-04
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 42 6e-04
>gi|239752224 PREDICTED: hypothetical protein XP_002348163 [Homo
sapiens]
Length = 284
Score = 589 bits (1519), Expect = e-169
Identities = 284/284 (100%), Positives = 284/284 (100%)
Query: 1 MHAPPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTS 60
MHAPPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTS
Sbjct: 1 MHAPPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTS 60
Query: 61 SPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFE 120
SPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFE
Sbjct: 61 SPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFE 120
Query: 121 RKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAERRSPG 180
RKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAERRSPG
Sbjct: 121 RKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAERRSPG 180
Query: 181 HTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGALFGSCEVLLLPPG 240
HTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGALFGSCEVLLLPPG
Sbjct: 181 HTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGALFGSCEVLLLPPG 240
Query: 241 ACTSPPGSEPPTQDWLRVRDLPDKEKLMFDLSFIPETDKPVYCC 284
ACTSPPGSEPPTQDWLRVRDLPDKEKLMFDLSFIPETDKPVYCC
Sbjct: 241 ACTSPPGSEPPTQDWLRVRDLPDKEKLMFDLSFIPETDKPVYCC 284
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 55.8 bits (133), Expect = 4e-08
Identities = 60/214 (28%), Positives = 81/214 (37%), Gaps = 23/214 (10%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRP-SPSSKTVLGCQAPPRRP--------PSST 53
A P L+PSP+PP LP AP+P P SS+T + AP P P
Sbjct: 1591 AAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPA 1650
Query: 54 PCPLLTSS------PSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAP- 106
P P+L S P+P+PS L + A+ ++ L +L GS+ L + P
Sbjct: 1651 PTPVLAPSSTQTMLPAPVPSPLPSPASTQTLA--LAPALAPTLGGSSPSQTLSLGTGNPQ 1708
Query: 107 ---GTQQCSLGFCCTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTP 163
TQ SL + + APG G + + AP PP P P
Sbjct: 1709 GPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPL--APASPVGPAPAH 1766
Query: 164 TRGSTRQRGGAERRSPGHTVTLYSSPGTVDSESP 197
T A +P TL SP V + P
Sbjct: 1767 TLTLAPASSSASLLAPASVQTLTLSPAPVPTLGP 1800
Score = 49.3 bits (116), Expect = 4e-06
Identities = 68/248 (27%), Positives = 94/248 (37%), Gaps = 18/248 (7%)
Query: 10 LSPSPSPPACSLPTAA-PAPPLRPSPSSKTVLG-CQAPPRRPPSSTPCPLLTSSPSPLPS 67
L+P+P PP+ LP P P L P LG +AP P P L SPSP S
Sbjct: 1327 LAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEVS 1386
Query: 68 LLLTAAAQES-AVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSV 126
AA + + L S L G + S P LA+P + S+ + +
Sbjct: 1387 ASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTT 1446
Query: 127 SPA---APGKIG-GVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAERRSPGHT 182
PA AP I L V A+ P + A P + GA + T
Sbjct: 1447 LPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALT 1506
Query: 183 VTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGALFGSCEVLLLPPGAC 242
+ L ++P S++PG +PT G+ TV+ +C V L+P A
Sbjct: 1507 LGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPV-----------LVPASAL 1555
Query: 243 TSPPGSEP 250
SP S P
Sbjct: 1556 ASPFPSAP 1563
Score = 35.0 bits (79), Expect = 0.075
Identities = 53/238 (22%), Positives = 87/238 (36%), Gaps = 31/238 (13%)
Query: 1 MHAPPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTS 60
+H P L + SP P S P A+P P S ++ P P++ P P
Sbjct: 1401 LHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSL------PISVPTTLPAPASAP 1454
Query: 61 SPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFE 120
P+ + L +A+ + + +T L + G L S A+P +LG T
Sbjct: 1455 LTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGL-ATAP 1513
Query: 121 RKRSSVSPAAP-------GKIGGVSLAVGAAPPP----------PRPNRPRCAARGRPTP 163
SS +P P + G++ V A P P P+ P P P
Sbjct: 1514 SLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAP------NPAP 1567
Query: 164 TRGSTRQRGGAERRSPGHTVTLYSSPGT-VDSESPGRDGAGSPTILARAGVAWTVSSS 220
+ S + ++ + ++P T + + SP A P + G A ++SS
Sbjct: 1568 AQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASS 1625
Score = 33.5 bits (75), Expect = 0.22
Identities = 39/156 (25%), Positives = 57/156 (36%), Gaps = 13/156 (8%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPL-LTSS 61
+PP + P SP P P P P P+ ++ +P P S P +T+
Sbjct: 2484 SPPPPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPPSVPISASVTNL 2543
Query: 62 PSPL-PSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFE 120
P L P L A A S L AS+ ++ S +SL P
Sbjct: 2544 PLGLRPEAELCAQALASPESLELASVASSETSS-------LSLVPPKDLLPVAVEILPVS 2596
Query: 121 RKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCA 156
K S++P+AP ++L G+ P P A
Sbjct: 2597 EKNLSLTPSAP----SLTLEAGSIPNGQEQEAPDSA 2628
Score = 31.2 bits (69), Expect = 1.1
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 12/82 (14%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVL----------GCQAPPRRPPSSTPCPLLTS 60
+P+ P +P +AP P P+P T+L Q PP P+ TP P T
Sbjct: 2450 APAAIPALVPVPVSAPVPISAPNPI--TILPVHILPSPPPPSQIPPCSSPACTPPPACTP 2507
Query: 61 SPSPLPSLLLTAAAQESAVGLL 82
P+ P T S+ LL
Sbjct: 2508 PPAHTPPPAQTCLVTPSSPLLL 2529
Score = 30.0 bits (66), Expect = 2.4
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 11/65 (16%)
Query: 12 PSPSPPACSLPTAAPAPPLRP-------SPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSP 64
P P P + PT P P + P SP+ ++ P RPP P L +
Sbjct: 1026 PPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLI----PASRPPGPVLLPPLQPNSGS 1081
Query: 65 LPSLL 69
LP +L
Sbjct: 1082 LPQVL 1086
Score = 28.5 bits (62), Expect = 7.0
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 11/59 (18%)
Query: 15 SPPACS-----LPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSL 68
+PP CS +P AP P RP+P+S A P P P+ S+P+P+ L
Sbjct: 2425 TPPRCSPARERVPRPAPRP--RPTPASAPA----AIPALVPVPVSAPVPISAPNPITIL 2477
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 47.0 bits (110), Expect = 2e-05
Identities = 55/206 (26%), Positives = 77/206 (37%), Gaps = 27/206 (13%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSP 62
APPL SP SPP P+A P PP P P + L PP + P + P L + P
Sbjct: 476 APPLQVPPSPPASPPMS--PSATP-PPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALP 532
Query: 63 SPLPSLLLTAAAQESA-VGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFER 121
SP S A SA + + + + PLL +P T +
Sbjct: 533 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP-------TLQA 585
Query: 122 KRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAERRSPGH 181
R +P + G L + AP PP P P+R + G + GH
Sbjct: 586 PRRPPTPGPDTSVSGPRLTLALAPGPP------------PPPSRSPSSTLSGPD--LAGH 631
Query: 182 TVTLYSSPGTVDSESPGRDG--AGSP 205
+ + S+P + G +G A SP
Sbjct: 632 SSSATSTPEELRGYDSGPEGGAAASP 657
Score = 38.5 bits (88), Expect = 0.007
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 3 APPLLGFLSPSP-SPPACSLPTAAPAPPLRPSPSSKTVLGCQAP---PRRPPSSTPCPLL 58
A P LG LS SP + P+ S + APP P+ + L CQ P PPS + P L
Sbjct: 292 AAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSL 351
Query: 59 TSSPSP 64
+ PSP
Sbjct: 352 QTLPSP 357
Score = 36.2 bits (82), Expect = 0.034
Identities = 54/221 (24%), Positives = 73/221 (33%), Gaps = 39/221 (17%)
Query: 12 PSPSPPACSLPTAAPAPPLRPSPSSKTVLG------------------CQAPPRRPPSST 53
PSPS P SL T P+PP P + T LG PP + P +
Sbjct: 343 PSPSAPP-SLQTL-PSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPAL 400
Query: 54 PCPLLTSSPSP--LPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQC 111
P L + PSP P L A A L LL+ P+ + P +
Sbjct: 401 ALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPV 460
Query: 112 SLGFCCTFERKRSSVSPA-APGKIGGVSLAVGAAPPPPRPNRPRCAARGR-PTPTRGSTR 169
S S+ P+ AP + L V +PP P P + P P
Sbjct: 461 S----------PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 510
Query: 170 QRGGAERRSPGHTVT-----LYSSPGTVDSESPGRDGAGSP 205
Q ++P T L S P + ++P A P
Sbjct: 511 QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLP 551
Score = 34.7 bits (78), Expect = 0.098
Identities = 28/88 (31%), Positives = 34/88 (38%), Gaps = 17/88 (19%)
Query: 16 PPACSLPTAAPAPPLRP-------SPSSKTVLGCQAPPRRPPS----------STPCPLL 58
PP + P AP L P +PS L QAPP P + +TP PL
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLA 341
Query: 59 TSSPSPLPSLLLTAAAQESAVGLLTASL 86
SPS PSL + + T SL
Sbjct: 342 PPSPSAPPSLQTLPSPPATPPSQATTSL 369
Score = 33.9 bits (76), Expect = 0.17
Identities = 46/155 (29%), Positives = 53/155 (34%), Gaps = 31/155 (20%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVL-GCQAPPRRPPS------STPC 55
APP L +P S C L T P P PSPS+ L +PP PPS +P
Sbjct: 317 APPTLP-ATPHSSSLTCQLATPLPLAP--PSPSAPPSLQTLPSPPATPPSQATTSLGSPT 373
Query: 56 PLLTSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGF 115
T S P P L A A L L+ S P L LA P
Sbjct: 374 LQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPP-SPPASPPLSPLATP--------- 423
Query: 116 CCTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRP 150
SP AP + L +PPP P
Sbjct: 424 -----------SPQAPNALAVHLLQAPFSPPPSPP 447
Score = 32.0 bits (71), Expect = 0.63
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLL-TSSPSPLPSLL 69
SP+ S P+ APA P +P P K + + P PP P L S SPL +
Sbjct: 251 SPARSGPSARGTPRAPAHPSQPKP--KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308
Query: 70 LTAAAQESAVGLLTAS 85
+AA Q A L A+
Sbjct: 309 PSAALQSQAPPTLPAT 324
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 47.0 bits (110), Expect = 2e-05
Identities = 55/206 (26%), Positives = 77/206 (37%), Gaps = 27/206 (13%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSP 62
APPL SP SPP P+A P PP P P + L PP + P + P L + P
Sbjct: 437 APPLQVPPSPPASPPMS--PSATP-PPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALP 493
Query: 63 SPLPSLLLTAAAQESA-VGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFER 121
SP S A SA + + + + PLL +P T +
Sbjct: 494 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP-------TLQA 546
Query: 122 KRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAERRSPGH 181
R +P + G L + AP PP P P+R + G + GH
Sbjct: 547 PRRPPTPGPDTSVSGPRLTLALAPGPP------------PPPSRSPSSTLSGPD--LAGH 592
Query: 182 TVTLYSSPGTVDSESPGRDG--AGSP 205
+ + S+P + G +G A SP
Sbjct: 593 SSSATSTPEELRGYDSGPEGGAAASP 618
Score = 39.7 bits (91), Expect = 0.003
Identities = 58/240 (24%), Positives = 80/240 (33%), Gaps = 47/240 (19%)
Query: 3 APPLLGFLSPSP-------SPPACSLPTAA---PAPPLRPSPSSKTVLG----------- 41
A P LG LS SP +PP+ S P + P+PP P + T LG
Sbjct: 283 AAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFL 342
Query: 42 -------CQAPPRRPPSSTPCPLLTSSPSP--LPSLLLTAAAQESAVGLLTASLLKGDSG 92
PP + P + P L + PSP P L A A L LL+
Sbjct: 343 PSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFS 402
Query: 93 STGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPA-APGKIGGVSLAVGAAPPPPRPN 151
P+ + P + S S+ P+ AP + L V +PP P
Sbjct: 403 PPPSPPVQAPFSPPASPPVS----------PSATPPSQAPPSLAAPPLQVPPSPPASPPM 452
Query: 152 RPRCAARGR-PTPTRGSTRQRGGAERRSPGHTVT-----LYSSPGTVDSESPGRDGAGSP 205
P + P P Q ++P T L S P + ++P A P
Sbjct: 453 SPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLP 512
Score = 32.0 bits (71), Expect = 0.63
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 13/89 (14%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQ--APPRRP-----------PSSTPCPL 57
SP+ S P+ APA P +P P L PPR+ P +TP P
Sbjct: 242 SPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPS 301
Query: 58 LTSSPSPLPSLLLTAAAQESAVGLLTASL 86
SPS PSL + + T SL
Sbjct: 302 APPSPSAPPSLQTLPSPPATPPSQATTSL 330
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 46.2 bits (108), Expect = 3e-05
Identities = 54/166 (32%), Positives = 62/166 (37%), Gaps = 46/166 (27%)
Query: 4 PPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPS 63
P L L+ SP PPA LP P + PSP S PP RPP P L++S
Sbjct: 210 PVQLPRLALSPPPPAPPLPPPPPLAQVAPSPPS------PPPPPRPP-----PTLSASD- 257
Query: 64 PLPSLLLTAAAQESA------VGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCC 117
PSL A QE+A G L L K + PLL PGT SL
Sbjct: 258 --PSLDFLRAQQETANAIRELAGTLRQGLAKLSEALSALLPLL-----PGTPVDSL---- 306
Query: 118 TFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTP 163
+ P P PPPPRP P A + TP
Sbjct: 307 -----PPPLPPPPP------------PPPPPRPVLPPPAPKVEITP 335
Score = 30.4 bits (67), Expect = 1.8
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 15/66 (22%)
Query: 14 PSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSLLLTAA 73
P P SLP P PP P PP RP P P + +P P+ + AA
Sbjct: 299 PGTPVDSLPPPLPPPPPPP------------PPPRPVLPPPAPKVEITPEPVS---VVAA 343
Query: 74 AQESAV 79
+ AV
Sbjct: 344 VVDGAV 349
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 46.2 bits (108), Expect = 3e-05
Identities = 69/267 (25%), Positives = 93/267 (34%), Gaps = 46/267 (17%)
Query: 4 PPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSK------TVLGCQAPPRR-PPSSTPCP 56
PP SP SP A LP AP P PS K ++ G PP PPS P
Sbjct: 1035 PPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGP 1094
Query: 57 LLTSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFC 116
++PSP + + AA S G L KG P + P + G
Sbjct: 1095 ---ATPSPKGAPMPPAATPPSPKGGLATPPHKG-------APTTPAATPPSPK----GGL 1140
Query: 117 CTFERKRSSVSPAA--PGKIGGVSL--------AVGAAPPPPRPNRPRCAARGRPT-PTR 165
T K + +PAA P GG++ A PP P+ + +G PT P
Sbjct: 1141 ATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1200
Query: 166 GSTRQRGGAERRSPGHTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVE 225
+GG SP T +P G SP G T +++ +
Sbjct: 1201 TPPSPKGGLATPSPKGAPT---TPAATPPSPKGGLATPSPK-----GAPTTPAATPPSPK 1252
Query: 226 GALFGSCEVLLLPPGACTSPPGSEPPT 252
G PP +PP + PP+
Sbjct: 1253 GG------PATPPPKGAPTPPAATPPS 1273
Score = 44.3 bits (103), Expect = 1e-04
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 13 SPSPPACSLPTAAPAPPLRPSPSSKTVLG--CQAPPRRPPSSTPCPLLTSSPSP--LPSL 68
SP+P C L A A P PS T+ + P + S T PL T+ +P LP+L
Sbjct: 50 SPAPQQCPLSAANQASPF---PSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNL 106
Query: 69 L---LTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSS 125
+ ++ AA A ++ A LKG S+ PL + AP + Q S F S
Sbjct: 107 IGPPISPAALALASPMI-APTLKGTPSSS--APLALVALAPHSVQKSSAFPPNLLTSPPS 163
Query: 126 VSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTP 163
V+ A G + ++L+ AP P+ N + + P P
Sbjct: 164 VAVAESGSV--ITLSAPIAPSEPKTNLNKVPSEVVPNP 199
Score = 42.7 bits (99), Expect = 4e-04
Identities = 33/93 (35%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 4 PPLLGFLSPS----PSP---PACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCP 56
PP G +P+ PSP PA S P AP PP PS K +P PP P P
Sbjct: 1281 PPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPK-----GSPGTPPPKGAPTP 1335
Query: 57 LLTSSPSPLPSLLLTAAAQESAVGLLTASLLKG 89
+ PSP + L A S G T S +G
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEG 1368
Score = 41.6 bits (96), Expect = 8e-04
Identities = 66/255 (25%), Positives = 90/255 (35%), Gaps = 41/255 (16%)
Query: 7 LGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLP 66
L F SP PT P+P P+PS+ T L + PP TP P + + P P
Sbjct: 841 LSFQGSKDSPATTHSPTP-PSPKGAPTPSAVTPLSPKGVTL-PPKETPTPSVVNLPFPKE 898
Query: 67 SLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSV 126
A Q A+ + ++S K + A P + G + K +
Sbjct: 899 GPATPAPKQAPALSMTSSSPKK-------------ARATPAPK----GIPASPSPKGAPT 941
Query: 127 SPAA--PGKIGG--------VSLAVGAAPPPPRPNRPRCAARGRPTPTRGS-TRQRGGAE 175
PAA P GG A PP P+ + +G PTP + +GG
Sbjct: 942 PPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPA 1001
Query: 176 RRSPGHTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGALFGSCEVL 235
SP T P V SP GSP A T ++ + GS
Sbjct: 1002 TPSPKGAPT----PPAVTPPSP----KGSPAATPFPKGASTPPAA---TPPSPKGSPAAT 1050
Query: 236 LLPPGACTSPPGSEP 250
LP GA T+P + P
Sbjct: 1051 PLPKGAPTTPAATLP 1065
Score = 38.1 bits (87), Expect = 0.009
Identities = 61/264 (23%), Positives = 84/264 (31%), Gaps = 27/264 (10%)
Query: 3 APPLLGFLSPSPSPPACSLPTAA-----------PAPPLRPSPSSKTVLGCQAPPRRP-P 50
A P + SPSP P AA P+P P+P + T + P P P
Sbjct: 923 ATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSP 982
Query: 51 SSTPCPLLTSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQ 110
P P + PSP + +T KG +T F P S T
Sbjct: 983 KGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPF-PKGASTPPAATPP 1041
Query: 111 CSLGFCCTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGS-TR 169
G SPAA G A P P+ + +G PTP +
Sbjct: 1042 SPKG------------SPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPS 1089
Query: 170 QRGGAERRSP-GHTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGAL 228
+GG SP G + ++P + G+PT A + + +GA
Sbjct: 1090 PKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAP 1149
Query: 229 FGSCEVLLLPPGACTSPPGSEPPT 252
P G +PP PT
Sbjct: 1150 TTPAATPPSPKGGLATPPPKGAPT 1173
Score = 37.0 bits (84), Expect = 0.020
Identities = 45/197 (22%), Positives = 69/197 (35%), Gaps = 11/197 (5%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPP-SSTPCPLLTSSPSPLPSLL 69
+P+ +PP+ A P P P+P + T + PP P P + + PSP
Sbjct: 1243 TPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGG-- 1300
Query: 70 LTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPA 129
A + A+ GS G P + P S T + +P+
Sbjct: 1301 -PATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTL----PATTPS 1355
Query: 130 APGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAERRSPGHTVTLYSSP 189
+ G S G PP P+ A P+P RG + SP + SP
Sbjct: 1356 SKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSP---AVIPLSP 1412
Query: 190 GTVDSESPGRDGAGSPT 206
+ R+GA +P+
Sbjct: 1413 KKAPATPVTREGAATPS 1429
Score = 35.0 bits (79), Expect = 0.075
Identities = 54/217 (24%), Positives = 73/217 (33%), Gaps = 20/217 (9%)
Query: 4 PPLLGFLSPSPSPP------ACSLPTAAPAPPLRPSPSSKTVLGCQAP---PRRPPSSTP 54
PP +P+ +PP A P AP P PS K L +P P P ++ P
Sbjct: 1167 PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1226
Query: 55 CP---LLTSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCP--LLMSLAAPGTQ 109
P L T SP P+ AA S G KG P L LA P +
Sbjct: 1227 SPKGGLATPSPKGAPT--TPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHK 1284
Query: 110 QCSLGFCCTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTR 169
T + + + P G A PP P+ + +G PTP +
Sbjct: 1285 GAPNPAVVTPPSPKGGPATSPP---KGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPP 1341
Query: 170 QRGGAERRSPGHTVTLYSSPGTVDSESPGRDGAGSPT 206
G P T + P T S+ A +P+
Sbjct: 1342 SPKGTP-TLPATTPSSKGGPTTPSSKEGPTPPAATPS 1377
Score = 33.1 bits (74), Expect = 0.28
Identities = 64/259 (24%), Positives = 95/259 (36%), Gaps = 35/259 (13%)
Query: 10 LSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPP------SSTPCPLLTSSPS 63
++PSP L T AP + S S ++ PP +S P + SSP
Sbjct: 710 VAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAP-VASSPK 768
Query: 64 PLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKR 123
P+ A+A S+ G LT DS S + P T++ S G
Sbjct: 769 ECPTEDSGASATASSKGTLT---YLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLS 825
Query: 124 SSVSPAAPGKIGGVSL---------AVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGA 174
S VSP + SL A +P PP P +G PTP+ + G
Sbjct: 826 SPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSP-------KGAPTPSAVTPLSPKGV 878
Query: 175 ERRSPGHTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGALFGSCEV 234
P T T P V+ P ++G +P + A +++SS + A +
Sbjct: 879 -TLPPKETPT----PSVVNLPFP-KEGPATPA--PKQAPALSMTSSSPKKARATPAPKGI 930
Query: 235 LLLP-PGACTSPPGSEPPT 252
P P +PP + PP+
Sbjct: 931 PASPSPKGAPTPPAATPPS 949
Score = 32.0 bits (71), Expect = 0.63
Identities = 53/221 (23%), Positives = 79/221 (35%), Gaps = 37/221 (16%)
Query: 4 PPLLGFLSP--SPSPPACSLPT-----AAPAP------------PLRPSPSSKTVLGCQA 44
PP + SP +P+PPA + P+ A PAP L+ SP+S + C+
Sbjct: 1602 PPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKM 1661
Query: 45 PPRRPPSSTPCPLLTSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLA 104
P +S P P+ L +L+ A + + + +TA KG
Sbjct: 1662 GATVPQASKGLP-AKKGPTALKEVLVAPAPESTPI--ITAPTRKGPQTKKSSATSPPICP 1718
Query: 105 APGTQQCSLGFCCTFERK-----RSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAA-- 157
P + S G T + S A GK S APP + + P AA
Sbjct: 1719 DPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAF 1778
Query: 158 -RGRPTPTRGSTRQRGGAERRSPGHTVTLYSSPGTVDSESP 197
+ P P S +P V+L +P V + P
Sbjct: 1779 EKVLPKPESASV-------SAAPSPPVSLPLAPSPVPTLPP 1812
Score = 30.0 bits (66), Expect = 2.4
Identities = 65/273 (23%), Positives = 89/273 (32%), Gaps = 44/273 (16%)
Query: 7 LGFLSPSPSPPACSLPTAAPAPPLRP-SPSSKTVLGCQAPPRRP-------------PSS 52
L +L+ SPSP S+ PP + S T +G + P P S
Sbjct: 787 LTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGS 846
Query: 53 TPCPLLTSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSL-------AA 105
P T SP+P PS A SAV L+ + T P +++L A
Sbjct: 847 KDSPATTHSPTP-PS--PKGAPTPSAVTPLSPKGVTLPPKETP-TPSVVNLPFPKEGPAT 902
Query: 106 PGTQQCSLGFCCTFERKRSSVSPAAPG-----KIGGVSLAVGAAPPPPRPNRPRCAARGR 160
P +Q + K++ +PA G G A PP P+ + +
Sbjct: 903 PAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWA 962
Query: 161 PTPTRGS-TRQRGGAERRSPGHTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSS 219
PTP + +GG SP T P G SP S
Sbjct: 963 PTPPAATPPSPKGGPATPSPKGAPT---PPAATPPSPKGGPATPSPKGAPTPPAVTPPSP 1019
Query: 220 SCYRVEGALFGSCEVLLLPPGACTSPPGSEPPT 252
GS P GA T PP + PP+
Sbjct: 1020 K---------GSPAATPFPKGAST-PPAATPPS 1042
Score = 28.5 bits (62), Expect = 7.0
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 2 HAPPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPP-RRPPSSTPCPLLTS 60
H+P G L+P S + L TAA + P P S +V +PP P + +P P L
Sbjct: 1756 HSPK--GPLAPPESKASTPL-TAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPP 1812
Query: 61 SPSPLPS 67
LPS
Sbjct: 1813 KQQFLPS 1819
>gi|219802034 nuclear factor related to kappaB binding protein
isoform 1 [Homo sapiens]
Length = 1299
Score = 45.8 bits (107), Expect = 4e-05
Identities = 63/278 (22%), Positives = 103/278 (37%), Gaps = 73/278 (26%)
Query: 10 LSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPS-PLPSL 68
+ P+P P A PA P+ P P S + P S+ LL SSP+ P
Sbjct: 715 MPPTPVTPVTPTTPALPAIPISPPPVSAVNKSGPSTVSEPAKSSSGVLLVSSPTMPHLGT 774
Query: 69 LLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSP 128
+L+ A+ ++A A+ + SGS G + + +A P P
Sbjct: 775 MLSPASSQTAPSSQAAARVVSHSGSAGLSQVRV-VAQPSL-------------------P 814
Query: 129 AAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTP------------TRGSTRQRGGAER 176
A P + GG + + P P+ P A + + P T +T QR G
Sbjct: 815 AVPQQSGGPAQTLPQMPAGPQIRVPATATQTKVVPQTVMATVPVKAQTTAATVQRPG--- 871
Query: 177 RSPGHT-VTLYSSPGTVD------SESPGRDGAGSPT----------------------- 206
PG T +T+ S P T + SPG + T
Sbjct: 872 --PGQTGLTVTSLPATASPVSKPATSSPGTSAPSASTAAVIQNVTGQNIIKQVAITGQLG 929
Query: 207 ILARAGVAWTVSSSCYRVEGALFGSCEVLLLPPGACTS 244
+ + G + ++++ +R++G +VL LPP + T+
Sbjct: 930 VKPQTGNSIPLTATNFRIQGK-----DVLRLPPSSITT 962
>gi|23346420 nuclear factor related to kappaB binding protein
isoform 2 [Homo sapiens]
Length = 1324
Score = 45.8 bits (107), Expect = 4e-05
Identities = 63/278 (22%), Positives = 103/278 (37%), Gaps = 73/278 (26%)
Query: 10 LSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPS-PLPSL 68
+ P+P P A PA P+ P P S + P S+ LL SSP+ P
Sbjct: 740 MPPTPVTPVTPTTPALPAIPISPPPVSAVNKSGPSTVSEPAKSSSGVLLVSSPTMPHLGT 799
Query: 69 LLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSP 128
+L+ A+ ++A A+ + SGS G + + +A P P
Sbjct: 800 MLSPASSQTAPSSQAAARVVSHSGSAGLSQVRV-VAQPSL-------------------P 839
Query: 129 AAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTP------------TRGSTRQRGGAER 176
A P + GG + + P P+ P A + + P T +T QR G
Sbjct: 840 AVPQQSGGPAQTLPQMPAGPQIRVPATATQTKVVPQTVMATVPVKAQTTAATVQRPG--- 896
Query: 177 RSPGHT-VTLYSSPGTVD------SESPGRDGAGSPT----------------------- 206
PG T +T+ S P T + SPG + T
Sbjct: 897 --PGQTGLTVTSLPATASPVSKPATSSPGTSAPSASTAAVIQNVTGQNIIKQVAITGQLG 954
Query: 207 ILARAGVAWTVSSSCYRVEGALFGSCEVLLLPPGACTS 244
+ + G + ++++ +R++G +VL LPP + T+
Sbjct: 955 VKPQTGNSIPLTATNFRIQGK-----DVLRLPPSSITT 987
>gi|153281158 dual specificity phosphatase 8 [Homo sapiens]
Length = 625
Score = 45.8 bits (107), Expect = 4e-05
Identities = 71/252 (28%), Positives = 94/252 (37%), Gaps = 27/252 (10%)
Query: 8 GFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPS 67
G P PSP A AP P L P S G A S+ P P+P P+
Sbjct: 315 GTPEPPPSPAA-----GAPLPRLPPPTSESAATGNAAAREGGLSAGGEP-----PAP-PT 363
Query: 68 LLLTAAAQESAVGLLTASLLKGDSG--STGFCPLLMSLAAPGTQQCSLGFCCTFERKRSS 125
T+A Q+ GL +S D+ F + S AP + G E +
Sbjct: 364 PPATSALQQGLRGLHLSSDRLQDTNRLKRSFSLDIKSAYAPSRRPDGPGPPDPGEAPKLC 423
Query: 126 VSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQR---------GGAER 176
+ G G+S +P RPR R RP P GS + G A R
Sbjct: 424 KLDSPSGAALGLSSPSPDSPDAAPEARPR--PRRRPRPPAGSPARSPAHSLGLNFGDAAR 481
Query: 177 RSPGHTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGALFGSCEVLL 236
++P H ++ S+PG P GA +P L G C+ EGA G+ VL
Sbjct: 482 QTPRHGLSALSAPGLPGPGQPAGPGAWAPP-LDSPGTPSPDGPWCFSPEGAQ-GAGGVLF 539
Query: 237 LPPGACTSP-PG 247
P G +P PG
Sbjct: 540 APFGRAGAPGPG 551
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 45.4 bits (106), Expect = 6e-05
Identities = 67/233 (28%), Positives = 91/233 (39%), Gaps = 45/233 (19%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLR--PSPSSKTVLGCQA-PPRRPPSSTPCPLLT 59
+PP +SPS +PP + P A APPL+ PSP + + A PP R P P L
Sbjct: 709 SPPASPPMSPSATPPPQAPPPLA-APPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQ 767
Query: 60 SSPSPLPSLLLTAAAQ---ESAVGLLTASLLKGDS------GSTGFCP---LLMS----- 102
PSP SL ++ A+ ++ L T L S G F P L MS
Sbjct: 768 VPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP 827
Query: 103 -------LAAPGTQ-QCSLGFCCTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPR 154
LAAP Q S T + R +P + G L + AP PP
Sbjct: 828 PPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP------ 881
Query: 155 CAARGRPTPTRGSTRQRGGAERRSPGHTVTLYSSPGTVDSESPGRDG--AGSP 205
P P+R + G + GH+ + S+P + G +G A SP
Sbjct: 882 ------PPPSRSPSSTLSGPD--LAGHSSSATSTPEELRGYDSGPEGGAAASP 926
Score = 43.5 bits (101), Expect = 2e-04
Identities = 29/66 (43%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSP 62
A P LG LS SP A P+ A P+ P ++ T L PP PP +TP PL SP
Sbjct: 292 AAPALGPLSSSPL--ATPSPSGTKARPVPPPDNAATPLPATLPPS-PPLATPLPLAPPSP 348
Query: 63 SPLPSL 68
S PSL
Sbjct: 349 SAPPSL 354
Score = 39.7 bits (91), Expect = 0.003
Identities = 48/154 (31%), Positives = 62/154 (40%), Gaps = 19/154 (12%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVL-GCQAPPRRPPSSTPCPLLTSS 61
A PL L PSP P A P P PSPS+ L +PP PPS P P +T+
Sbjct: 324 ATPLPATLPPSP-------PLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAP-PSMTTP 375
Query: 62 PSPLPSLLLTAAAQESAVGLLTASLLKGDSG-STGFCPLLMSLAAPGTQQCSLGFCCTFE 120
P P L T + L + SL S + SL +P T Q + F
Sbjct: 376 PMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSP-TLQATHSFLTMSP 434
Query: 121 R--KRSSVSPAAPGKIGGVS------LAVGAAPP 146
R + S SP+ P S L++ A+PP
Sbjct: 435 RQTQASLTSPSRPASTPPDSPPLQAPLSLPASPP 468
Score = 37.7 bits (86), Expect = 0.012
Identities = 49/176 (27%), Positives = 57/176 (32%), Gaps = 31/176 (17%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSP 62
+PPL G SP SP A P A P L P QAPP P S PL T SP
Sbjct: 600 SPPLQGLPSPPLSPLATPPPQAPPXLALPP---------LQAPPSPPASPPLSPLATPSP 650
Query: 63 ---------------SPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPG 107
SP PS + A A ++ S SLAAP
Sbjct: 651 QAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPP-------SLAAPP 703
Query: 108 TQQCSLGFCCTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTP 163
Q ++ P AP + L V +PP P P R P
Sbjct: 704 LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPP 759
Score = 34.7 bits (78), Expect = 0.098
Identities = 48/162 (29%), Positives = 63/162 (38%), Gaps = 22/162 (13%)
Query: 3 APPLLGFLSPS-PSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPL---- 57
APP L S +PP +LP+ AP PPL+ + + T + PP PCPL
Sbjct: 519 APPSLQTPPASLTTPPLENLPSLAP-PPLQTASAPLTTPHLET----PPCPAPCPLQAPP 573
Query: 58 --LTSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLM-------SLAAPGT 108
LT+ P PS + T Q A L + L+G S PL LA P
Sbjct: 574 SPLTTPPPETPSSIATPPPQ--APPALASPPLQG-LPSPPLSPLATPPPQAPPXLALPPL 630
Query: 109 QQCSLGFCCTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRP 150
Q ++ SP AP + L +PPP P
Sbjct: 631 QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPP 672
Score = 29.6 bits (65), Expect = 3.1
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPL---LTSSPSPLPS 67
SP+ S P+ APA P +P P K + + P PP P L+SSP PS
Sbjct: 251 SPARSGPSARGTPRAPAHPSQPKP--KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 45.4 bits (106), Expect = 6e-05
Identities = 29/66 (43%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSP 62
APPL G + P P PPA LP AP PP P P ++G PP P PLL P
Sbjct: 554 APPLPG-VGPPPPPPAPPLPGGAPLPP--PPPPLPGMMGIPPPP-------PPPLLFGGP 603
Query: 63 SPLPSL 68
P P L
Sbjct: 604 PPPPPL 609
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 45.4 bits (106), Expect = 6e-05
Identities = 29/66 (43%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSP 62
APPL G + P P PPA LP AP PP P P ++G PP P PLL P
Sbjct: 554 APPLPG-VGPPPPPPAPPLPGGAPLPP--PPPPLPGMMGIPPPP-------PPPLLFGGP 603
Query: 63 SPLPSL 68
P P L
Sbjct: 604 PPPPPL 609
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 44.3 bits (103), Expect = 1e-04
Identities = 56/204 (27%), Positives = 79/204 (38%), Gaps = 35/204 (17%)
Query: 17 PACSLPTAA--PAPPLRPSPSSKTVLGCQAPPRRPPSSTP----CPLLTSSP----SPLP 66
P+ ++PT A PAP P+P+ L A R S P P +T SP +P+
Sbjct: 500 PSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVE 559
Query: 67 SLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSV 126
+ A + + G S PL +PGT Q
Sbjct: 560 DMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQ---------------- 603
Query: 127 SPAAPGKIGGVSLAVGAAPPPPRPNRPRCAAR-GRPTPTRGSTRQRGGAERRSPGHTVTL 185
A P ++ G SL PPP P P+ A R R +P S G A SP V+L
Sbjct: 604 --ALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPA---SPS-PVSL 657
Query: 186 YSSPGTVDSESPGRDGAGSPTILA 209
S+P VD + +G G+P ++
Sbjct: 658 -SNPAQVDLGAATAEG-GAPEAIS 679
Score = 31.6 bits (70), Expect = 0.83
Identities = 43/138 (31%), Positives = 53/138 (38%), Gaps = 21/138 (15%)
Query: 14 PSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRR-PPSSTPCPLLTSSPSPLPSLLLTA 72
P P ++ PAPPL P S QA PRR SS P + P PLP
Sbjct: 576 PPPQVSGSRSSPPAPPLPPGSGSPGT--PQALPRRLVGSSLRAPTV---PPPLPPTPPQP 630
Query: 73 AAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPAAPG 132
A ++S + S S P +SL+ P Q LG ++ AP
Sbjct: 631 ARRQSRRSPASPSPASPGPAS----PSPVSLSNPA--QVDLG--------AATAEGGAPE 676
Query: 133 KIGGVSLAVGAAPPPPRP 150
I GV A PP PRP
Sbjct: 677 AISGVP-TPPAIPPQPRP 693
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 44.3 bits (103), Expect = 1e-04
Identities = 60/229 (26%), Positives = 82/229 (35%), Gaps = 41/229 (17%)
Query: 1 MHAPPLLGFLSPSPS---PPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPL 57
+H+ P G P+P+ PP P P+RP P L PP PP+ P P
Sbjct: 397 IHSAP--GPRRPAPALLAPPTFIFPAPTNGEPMRPGPPGLQELPPLPPPTPPPTLQP-PA 453
Query: 58 LTSSPSPL-PSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFC 116
L +P P+ P L +ESA+ A L P L + AP
Sbjct: 454 LQPTPLPVAPPLTPGLGHKESALAPTAAPALP---------PALAADQAP---------- 494
Query: 117 CTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRG---- 172
+ SPA + S V A P P + R RG+TR+ G
Sbjct: 495 --------APSPAPAPTVAEPSPPVSAPAPAAAPIKTRTRRNKGSRAARGATRKDGLHGD 546
Query: 173 GAERRSPGHTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSC 221
G R+ T T+ S G S + T AR + + V +SC
Sbjct: 547 GPRERA---TATVPDSSGGGGGGSGASQTGAANTRAARHWLPFQVLNSC 592
Score = 32.7 bits (73), Expect = 0.37
Identities = 70/286 (24%), Positives = 91/286 (31%), Gaps = 84/286 (29%)
Query: 4 PPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPC-----PLL 58
PP L L P P P S+ P P + P +T + PP P P P L
Sbjct: 136 PPSLRPLKPPPPPRQLSVKDTVPRAPSQFPPPLET---WKPPPPLPSERQPADRRITPAL 192
Query: 59 TSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLM---SLAAPGTQQCSLGF 115
+ SP ES G G + G P +A P + L
Sbjct: 193 ATPASP---------PTESQAGPRNQGQTAG--RARGGAPPHAGEGEMAQPADSESGLSL 241
Query: 116 CC--TFERKRSSVSPAAPGKI-----------GGVSLAVGA---APPPPRPNRPRCAARG 159
C TF+ + S PAA + GG+ A GA A + P AAR
Sbjct: 242 LCKITFKSRPSLAPPAASSSLAAKASLGGGGGGGLFAASGAISYAEVLKQGPLPPGAARP 301
Query: 160 RPTPTRGSTRQRGGAERRSPGHTVTLYSSPGTVDSESPGRDGAGS-PTILARAGVAWTVS 218
+RG+ GG D + G G S P ARA
Sbjct: 302 LGEVSRGAQEAEGG-------------------DGDGEGCSGPPSAPASQARA------- 335
Query: 219 SSCYRVEGALFGSCEVLLLPPGACTSPPGSEPPTQDWLRVRDLPDK 264
LPP T+ PGS+P DW+ D P++
Sbjct: 336 ------------------LPPPPYTTFPGSKPKF-DWVSAPDGPER 362
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 43.9 bits (102), Expect = 2e-04
Identities = 57/223 (25%), Positives = 72/223 (32%), Gaps = 47/223 (21%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPS----------- 51
APP P P PPA P P P P T L P +PP
Sbjct: 21 APPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPA 80
Query: 52 ----STPCPLLTSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPG 107
S P T SP+P +++T + + G + S P + G
Sbjct: 81 VPAPSQPTGAPTPSPAPQQYIVVTVSEGAMRASETVSEASPGSTASQTGVPTQVVQQVQG 140
Query: 108 TQQCSLGFCCTFERKRSSVSP----------------------AAPGKIGG-VSLAVGA- 143
TQQ L + + K VSP AAPG GG VSL V
Sbjct: 141 TQQ-RLLVQTSVQAKPGHVSPLQLTNIQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGT 199
Query: 144 ----APP---PPRPNRPRCAARGRPTPTRGSTRQRGGAERRSP 179
+PP P + N G PT T Q G ++ P
Sbjct: 200 QQVHSPPEQSPVQANSSSSKTAGAPTGTVPQQLQVHGVQQSVP 242
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 43.9 bits (102), Expect = 2e-04
Identities = 63/220 (28%), Positives = 88/220 (40%), Gaps = 30/220 (13%)
Query: 15 SPPACSLPTAAPA---PPLRPSPSSKTVLGCQA--------------PPRRPPSSTPCPL 57
+PP S PT P+ P PS +S T + A PPR P+ +P P
Sbjct: 178 TPPRAS-PTGMPSRTSPTGMPSTASLTKMDSTASITRTLSRASPTGTPPRASPTGSP-PR 235
Query: 58 LTSSPSPLPSLLLTAAAQESAVGLLT-ASLLKGDS-GSTGFCPLLMSLAAP-GT-QQCSL 113
+ S P +LL+ + S G+L+ SL K DS S P S A+P GT + SL
Sbjct: 236 ASLSMMPSTALLIRTPPRASPTGMLSRTSLTKMDSTASITRTPSRPSTASPTGTPSRASL 295
Query: 114 GFCCTFERKRSSVSPAAP-GKIGGVSLA-----VGAAPPPPRPNRPRCAARGRPTPTRGS 167
+ + A+P G + SL + PPR + R +R PT +
Sbjct: 296 SMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASITRTPSRASPTGKPST 355
Query: 168 TRQRGGAERRSPGHTVTLYSSPGTVDSESP-GRDGAGSPT 206
G R SP + + S G + SP G SPT
Sbjct: 356 ASPTGTPSRASPTGSPSTASLTGLSSTASPTGTPPRASPT 395
Score = 34.7 bits (78), Expect = 0.098
Identities = 60/215 (27%), Positives = 74/215 (34%), Gaps = 39/215 (18%)
Query: 11 SPSPSPPACSLPTAAPA-PPLR------PSPSSKTVLGCQA-----PPRRPPSSTPCPLL 58
SPS + P S TA+P P R PS +S T + A P R P+ TP
Sbjct: 469 SPSTASPTGSPSTASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPS--- 525
Query: 59 TSSPSPLPSLLLTAAAQESAVGLLT---ASLLKGDSGSTGFCPLLMSLA-APGTQQCSLG 114
T+SP+ PS L + A T ASL + S ++ P SL P T
Sbjct: 526 TASPTGSPSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRASLTRTPST------ 579
Query: 115 FCCTFERKRSSVSPAA-PGKIGGVSLAVGA-----------APPPPRPNRPRCAARGRPT 162
R S SP P + + A PPR + R PT
Sbjct: 580 --VLLTRMPPSASPTGMPSRTSPTGMPSSALLTKMDSTASITRTPPRASPTETPPRASPT 637
Query: 163 PTRGSTRQRGGAERRSPGHTVTLYSSPGTVDSESP 197
T G R SP T S GT SP
Sbjct: 638 GTPPRASPTGTPPRASPTGTPPRASPTGTPSRASP 672
Score = 33.9 bits (76), Expect = 0.17
Identities = 49/209 (23%), Positives = 73/209 (34%), Gaps = 28/209 (13%)
Query: 10 LSPSPSPPACSLPTAAPAPPLRPSPSSK---TVLGCQAPPRRPPSSTPCPLL------TS 60
++PS + LP A+P L + +K T + PPR + TP T+
Sbjct: 297 MTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASITRTPSRASPTGKPSTA 356
Query: 61 SPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFE 120
SP+ PS + +A + + L + TG P P T +
Sbjct: 357 SPTGTPSRASPTGSPSTA----SLTGLSSTASPTGTPPRASPTGTPST--------ASLT 404
Query: 121 RKRSSVSPAAPGKIGGVSLAVGAAPP---PPRPNRPRCAARGRPTPTRGSTRQRGGAERR 177
RK SP ++ A P PPR + R PT T G
Sbjct: 405 RKPPRASPTGMLSRTSITKMDSTASPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTA 464
Query: 178 SPGHTVTLYSSPGTVDSESPGRDGAGSPT 206
SP + + S G+ + SP GSP+
Sbjct: 465 SPTGSPSTASPTGSPSTASP----TGSPS 489
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 43.9 bits (102), Expect = 2e-04
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 16/78 (20%)
Query: 3 APPLLGFLSPSP--SPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRP----------- 49
AP L+ P+P +P S P AAPAPP P P+ G PP P
Sbjct: 325 APTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSG---PPSTPTLIPAFAPTPV 381
Query: 50 PSSTPCPLLTSSPSPLPS 67
P+ TP P+ T +P+P+P+
Sbjct: 382 PAPTPAPIFTPAPTPMPA 399
Score = 43.1 bits (100), Expect = 3e-04
Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 13/86 (15%)
Query: 12 PSPSPPACSLPTAAPAPPLRP------SPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPL 65
P+PSPP +P APAPP P +P S + P P S P PL +P+PL
Sbjct: 246 PAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPL 305
Query: 66 -------PSLLLTAAAQESAVGLLTA 84
P L+ A SA L+ A
Sbjct: 306 SVPVSAPPLALIQAPVPPSAPTLVLA 331
Score = 36.2 bits (82), Expect = 0.034
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSP 62
APP + +P+PS S PT PA P P+ P P++TP + TS+P
Sbjct: 351 APPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPAATPAAIPTSAP 410
Query: 63 SPLP---SLLLTAAAQESAVGLLTASLLKG 89
P S + AAQ A+ + S G
Sbjct: 411 IPASFSLSRVCFPAAQAPAMQKVPLSFQPG 440
Score = 32.0 bits (71), Expect = 0.63
Identities = 57/252 (22%), Positives = 82/252 (32%), Gaps = 27/252 (10%)
Query: 11 SPSPSPPACSLPTAAPA-----PPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPL 65
SP SPP A+P P S S++ L + PP P+ TSS + L
Sbjct: 599 SPLKSPPQLEREMASPPECSEMPLDLSSKSNRQKLPLPNQRKTPPMPVLTPVHTSSKALL 658
Query: 66 PSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSS 125
++L + A G S L S P ++ P T+ + ++
Sbjct: 659 STVLSRSQRTTQAAGGNVTSCLGSTSSPFVIFPEIVRNGDPS----------TWVKNSTA 708
Query: 126 VSPAAPGKIGGVSLAVGAA-----PPPPRPNR-PRCAARGRPTPTRGSTRQRG-GAERRS 178
+ PG GV+ V A+ P NR PR + P +G GA
Sbjct: 709 LISTIPGTYVGVANPVPASLLLNKDPNLGLNRDPRHLPKQEPISIIDQGEPKGTGATCGK 768
Query: 179 PGHTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGALFGSCEVLLLP 238
G P TV +P R G P + W + ++ C V P
Sbjct: 769 KGSQAGAEGQPSTVKRYTPARIAPGLPGCQTKELSLWKPTG-----PANIYPRCSVNGKP 823
Query: 239 PGACTSPPGSEP 250
P G P
Sbjct: 824 TSTQVLPVGWSP 835
Score = 30.4 bits (67), Expect = 1.8
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 10/75 (13%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPS---PSSKTVLGCQAP-------PRRPPSS 52
APP +P+P S+P +AP L + PS+ T++ P P P +
Sbjct: 289 APPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPA 348
Query: 53 TPCPLLTSSPSPLPS 67
P P P+P PS
Sbjct: 349 APAPPSVPMPTPTPS 363
Score = 28.1 bits (61), Expect = 9.1
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 3 APPLLGFLSPSPSPPACS----LPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLL 58
APP + L +P + S +P A APP P P S AP P S+ P L+
Sbjct: 261 APPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAP---APAPLSVPVSAPPLALI 317
Query: 59 TSSPSPLPSLLLTAAAQESAVGLLTAS 85
+ P L+ A + + AS
Sbjct: 318 QAPVPPSAPTLVLAPVPTPVLAPMPAS 344
Score = 28.1 bits (61), Expect = 9.1
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 12 PSPSPPACSLP--TAAPAPPLRPSPSSKTVLGCQAP-PRRPPSSTPCPLLTSSPSPLPSL 68
P+ +PP+ +P APAP P + L QAP P P+ P+ T +P+P+
Sbjct: 286 PASAPPSGPVPLSAPAPAPLSVPVSAPPLAL-IQAPVPPSAPTLVLAPVPTPVLAPMPAS 344
Query: 69 LLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAP 106
AA +V + T + G + P P
Sbjct: 345 TPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVP 382
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 43.5 bits (101), Expect = 2e-04
Identities = 61/217 (28%), Positives = 79/217 (36%), Gaps = 27/217 (12%)
Query: 10 LSPSPSPPA--CSLPTAAPA--PPLRPS------PSSKTVLGCQAPPRRPPSSTP----- 54
L+PS +P CS PT P P L PS PSS L + P PSSTP
Sbjct: 62 LTPSNTPTLTPCSTPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPS 121
Query: 55 -CPLLTSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSL 113
P LT S +P + T S+ LT S + S+ P L + P S
Sbjct: 122 STPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSS--TPTLTPSSTPTLTPSST 179
Query: 114 GFCCTFER---KRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQ 170
R RSS P +L + P N P PT T ST
Sbjct: 180 PTLTPSSRPILTRSSTPTLTPSST--PTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPT 237
Query: 171 RGGAERRSPGHTVTLYSSPGTVDSESPGRDGAGSPTI 207
+ R T+T S+P S +P + +PT+
Sbjct: 238 LTPSSR----PTLTRSSTPTLTPSSTPTLTPSSTPTL 270
Score = 39.3 bits (90), Expect = 0.004
Identities = 64/264 (24%), Positives = 93/264 (35%), Gaps = 33/264 (12%)
Query: 7 LGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTP------CPLLTS 60
+G ++ P PT P+ P +PS+ L + P P STP P LT
Sbjct: 37 VGEMTGPYGPREMGTPTLTPSSPPTLTPSNTPTLTPCSTPTLTPCSTPTLTPSNTPTLTP 96
Query: 61 SPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFE 120
S +P + T S+ LT S + S+ P L + P + S T
Sbjct: 97 SSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSS--TPTLTPSSTPTLTRSS-----TPT 149
Query: 121 RKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAERRSPG 180
SS P +L + P + P RP TR ST
Sbjct: 150 LTPSSTPTLTPSST--PTLTPSSTPTLTPSSTPTLTPSSRPILTRSST------------ 195
Query: 181 HTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGA---LFGSCEVLLL 237
T+T S+P S +P + +PT++ + T SS+ + L S L
Sbjct: 196 PTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLT 255
Query: 238 PPGACTSPPGSEP---PTQDWLRV 258
P T P S P P+ W +V
Sbjct: 256 PSSTPTLTPSSTPTLTPSSLWHQV 279
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 43.5 bits (101), Expect = 2e-04
Identities = 55/202 (27%), Positives = 71/202 (35%), Gaps = 47/202 (23%)
Query: 1 MHAPPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTS 60
M PP +G + P P PP+ P P+ PL P + Q PP PPSS+ +
Sbjct: 469 MMPPPPMGMMPPPPPPPS-GQPPPPPSGPLPPWQQQQQ----QPPPPPPPSSS-----MA 518
Query: 61 SPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCP-----LLMSLAAPGTQQCSLGF 115
S +PLP T SA TG P + A+PG Q
Sbjct: 519 SSTPLPWQQNTTTTTTSA--------------GTGSIPPWQQQQAAAAASPGAPQM---- 560
Query: 116 CCTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAE 175
+ ++ P PG L GA PPPP P + G P RG G
Sbjct: 561 -----QGNPTMVPLPPGV--QPPLPPGAPPPPPPPPP---GSAGMMIPPRGG----DGPS 606
Query: 176 RRSPGHTVTLYSSPGTVDSESP 197
S L + PG + P
Sbjct: 607 HESEDFPRPLVTLPGRQPQQRP 628
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 43.1 bits (100), Expect = 3e-04
Identities = 63/253 (24%), Positives = 89/253 (35%), Gaps = 28/253 (11%)
Query: 10 LSPSPSPPAC--SLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTP------CPLLTSS 61
L+PS +P S PT P+ +PSS+ +L + P PSS P P LT S
Sbjct: 2 LTPSNTPTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPS 61
Query: 62 PSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFER 121
+P + T S+ LT + S + P P T
Sbjct: 62 NTPTLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSN---------TPTL 112
Query: 122 KRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAER----R 177
S+ P +L + P + P RP TR ST + R R
Sbjct: 113 TPSNTPTLTPSNT--PTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTR 170
Query: 178 SPGHTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGALFGSCEVLLL 237
S T+T S+P S +P + +PT+ + T SS+ L S +L
Sbjct: 171 SSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSST-----PTLTPSSRPILT 225
Query: 238 PPGACTSPPGSEP 250
P T P S P
Sbjct: 226 PSSTPTLTPSSRP 238
Score = 43.1 bits (100), Expect = 3e-04
Identities = 57/215 (26%), Positives = 82/215 (38%), Gaps = 15/215 (6%)
Query: 10 LSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSLL 69
L+P P S PT P+ P +PS+ L P PS+TP +S+P+ PS
Sbjct: 82 LTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPS-- 139
Query: 70 LTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPA 129
T S+ +LT S + S+ P+L + P S T SS
Sbjct: 140 STPTLTPSSRPILTRSSTPTLTPSSR--PILTRSSTPTLTPSS-----TPTLTPSSTPTL 192
Query: 130 APGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAER----RSPGHTVTL 185
P +L + P R + P RP T ST + R RS T+T
Sbjct: 193 TPSST--PTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTP 250
Query: 186 YSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSS 220
S+P S +P + +PT+ T SS+
Sbjct: 251 SSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSST 285
Score = 31.6 bits (70), Expect = 0.83
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSLL 69
S +P+ S PT P+ +PS+ L P PSSTP +S+P+ PS L
Sbjct: 243 SSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSL 301
Score = 29.6 bits (65), Expect = 3.1
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 10 LSPSPSP--PACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPS 67
L+PS P S PT P+ +PS+ L P PS+TP +S+P+ PS
Sbjct: 232 LTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPS 291
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 43.1 bits (100), Expect = 3e-04
Identities = 63/253 (24%), Positives = 89/253 (35%), Gaps = 28/253 (11%)
Query: 10 LSPSPSPPAC--SLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTP------CPLLTSS 61
L+PS +P S PT P+ +PSS+ +L + P PSS P P LT S
Sbjct: 2 LTPSNTPTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPS 61
Query: 62 PSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFER 121
+P + T S+ LT + S + P P T
Sbjct: 62 NTPTLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSN---------TPTL 112
Query: 122 KRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAER----R 177
S+ P +L + P + P RP TR ST + R R
Sbjct: 113 TPSNTPTLTPSNT--PTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTR 170
Query: 178 SPGHTVTLYSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGALFGSCEVLLL 237
S T+T S+P S +P + +PT+ + T SS+ L S +L
Sbjct: 171 SSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSST-----PTLTPSSRPILT 225
Query: 238 PPGACTSPPGSEP 250
P T P S P
Sbjct: 226 PSSTPTLTPSSRP 238
Score = 43.1 bits (100), Expect = 3e-04
Identities = 57/215 (26%), Positives = 82/215 (38%), Gaps = 15/215 (6%)
Query: 10 LSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSLL 69
L+P P S PT P+ P +PS+ L P PS+TP +S+P+ PS
Sbjct: 82 LTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPS-- 139
Query: 70 LTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPA 129
T S+ +LT S + S+ P+L + P S T SS
Sbjct: 140 STPTLTPSSRPILTRSSTPTLTPSSR--PILTRSSTPTLTPSS-----TPTLTPSSTPTL 192
Query: 130 APGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAER----RSPGHTVTL 185
P +L + P R + P RP T ST + R RS T+T
Sbjct: 193 TPSST--PTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTP 250
Query: 186 YSSPGTVDSESPGRDGAGSPTILARAGVAWTVSSS 220
S+P S +P + +PT+ T SS+
Sbjct: 251 SSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSST 285
Score = 31.6 bits (70), Expect = 0.83
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSLL 69
S +P+ S PT P+ +PS+ L P PSSTP +S+P+ PS L
Sbjct: 243 SSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSL 301
Score = 29.6 bits (65), Expect = 3.1
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 10 LSPSPSP--PACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPS 67
L+PS P S PT P+ +PS+ L P PS+TP +S+P+ PS
Sbjct: 232 LTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPS 291
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 43.1 bits (100), Expect = 3e-04
Identities = 51/195 (26%), Positives = 73/195 (37%), Gaps = 21/195 (10%)
Query: 12 PSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSLLLT 71
P P P A PAPP +PSP+ C AP P + P P + +P+PL ++ T
Sbjct: 2377 PEPVDKRAKAPKARPAPP-QPSPAPPAFTSCPAP--EPFAELPAPATSLAPAPLITMPAT 2433
Query: 72 AAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPAAP 131
+ A S KG LL+ L G + + K + + P
Sbjct: 2434 RPKPKKA-RAAEESGAKGPRRPGEEAELLVKLDHEGVTSPK-----SKKAKEALLLREDP 2487
Query: 132 GKIGGVS----LAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAERRSPGHTVTLYS 187
G G L++G+ PP + P+ P T G Q G PG T
Sbjct: 2488 GAGGWQEPKSLLSLGSYPPAAGSSEPKAP---WPKATDGDLAQEPG-----PGLTFEDSG 2539
Query: 188 SPGTVDSESPGRDGA 202
+P + D +DGA
Sbjct: 2540 NPKSPDKAQAEQDGA 2554
Score = 31.6 bits (70), Expect = 0.83
Identities = 32/148 (21%), Positives = 57/148 (38%)
Query: 18 ACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSLLLTAAAQES 77
A S A+PA S SS + + SS+ +SS S S ++++ S
Sbjct: 2604 AASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2663
Query: 78 AVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPAAPGKIGGV 137
+ ++S DS + + A + Q +L T + ++ S +PGK
Sbjct: 2664 SSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPA 2723
Query: 138 SLAVGAAPPPPRPNRPRCAARGRPTPTR 165
P P +P +P+ A + P +
Sbjct: 2724 PQPQAPPPQPTQPLQPKAQAGAKSRPKK 2751
Score = 28.1 bits (61), Expect = 9.1
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Query: 12 PSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTS-----SPSPLP 66
PSP PP + P PAPP TV Q R + T P + + P +
Sbjct: 332 PSPLPPPPAPPKGPPAPPAATPAGVYTVFREQGREHRVVAPTFVPSVEAFDERPGPIQIA 391
Query: 67 SLLLTAAAQESAVG 80
S A A+E G
Sbjct: 392 SQARDARAREREAG 405
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 42.7 bits (99), Expect = 4e-04
Identities = 29/75 (38%), Positives = 31/75 (41%), Gaps = 14/75 (18%)
Query: 4 PPLLGFLSPSPSPP----------ACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSST 53
PPLL S P PP A +LPTA P PPL + APP PP
Sbjct: 427 PPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPL----PGLGAMAPPAPPLPPPLPG 482
Query: 54 PCPLLTSSPSPLPSL 68
C L P PLP L
Sbjct: 483 SCEFLPPPPPPLPGL 497
Score = 37.0 bits (84), Expect = 0.020
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSL 68
+P P PP LP ++ PP P P +G +A P PP P P L + P P L
Sbjct: 420 TPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPP-PPPLPGLGAMAPPAPPL 476
Score = 30.8 bits (68), Expect = 1.4
Identities = 24/77 (31%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 4 PPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPS 63
PPL G + +P P P L P P LGC PP PP P + P
Sbjct: 461 PPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPP--PPL---LPGMGWGPP 515
Query: 64 PLPSLLLTAAAQESAVG 80
P P LL G
Sbjct: 516 PPPPPLLPCTCSPPVAG 532
Score = 28.1 bits (61), Expect = 9.1
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 15/70 (21%)
Query: 6 LLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSS---- 61
+L P S P P PPL P G A P PP P P + +
Sbjct: 405 ILKVSQPRALEQQASTPPPPPPPPLLP--------GSSAEPPPPPPPPPLPSVGAKALPT 456
Query: 62 ---PSPLPSL 68
P PLP L
Sbjct: 457 APPPPPLPGL 466
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 42.7 bits (99), Expect = 4e-04
Identities = 29/75 (38%), Positives = 31/75 (41%), Gaps = 14/75 (18%)
Query: 4 PPLLGFLSPSPSPP----------ACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSST 53
PPLL S P PP A +LPTA P PPL + APP PP
Sbjct: 427 PPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPL----PGLGAMAPPAPPLPPPLPG 482
Query: 54 PCPLLTSSPSPLPSL 68
C L P PLP L
Sbjct: 483 SCEFLPPPPPPLPGL 497
Score = 37.0 bits (84), Expect = 0.020
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSL 68
+P P PP LP ++ PP P P +G +A P PP P P L + P P L
Sbjct: 420 TPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPP-PPPLPGLGAMAPPAPPL 476
Score = 30.8 bits (68), Expect = 1.4
Identities = 24/77 (31%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 4 PPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPS 63
PPL G + +P P P L P P LGC PP PP P + P
Sbjct: 461 PPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPP--PPL---LPGMGWGPP 515
Query: 64 PLPSLLLTAAAQESAVG 80
P P LL G
Sbjct: 516 PPPPPLLPCTCSPPVAG 532
Score = 28.1 bits (61), Expect = 9.1
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 15/70 (21%)
Query: 6 LLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSS---- 61
+L P S P P PPL P G A P PP P P + +
Sbjct: 405 ILKVSQPRALEQQASTPPPPPPPPLLP--------GSSAEPPPPPPPPPLPSVGAKALPT 456
Query: 62 ---PSPLPSL 68
P PLP L
Sbjct: 457 APPPPPLPGL 466
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 42.4 bits (98), Expect = 5e-04
Identities = 78/265 (29%), Positives = 102/265 (38%), Gaps = 57/265 (21%)
Query: 4 PPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPP-----SSTPCPLL 58
P LG SP+ SP P+++ S + + G AP P SS+P P
Sbjct: 834 PSALGSASPASSPSQVDTPSSS-------SFHIQQLAGFSAPAGLSPLLPSSSSSPPPGA 886
Query: 59 TSSPS-PLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCC 117
SPS P PS + AA + G +L G S S+ PLL L PG +
Sbjct: 887 CGSPSAPTPSAGV-AATTIAGFGHFHKAL--GGSLSSSDSPLLTPLQ-PGARS------- 935
Query: 118 TFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRGGAERR 177
+ + SPA PG GG+ L PPPP + P+ + G Q G
Sbjct: 936 ---PQAAQPSPAPPGARGGLGLPEHFLPPPP--------SSRSPSSSPGQLGQPPG--EL 982
Query: 178 SPGHTVTLYSSPGTV--DSESP----GRDGAGSPT-ILARAGVA---------WTVSSSC 221
S G S+P T E P G G SP R G++ T S+
Sbjct: 983 SLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAP 1042
Query: 222 YRVEGALFGSCEVLLLPPGACTSPP 246
R G+ GS LLLPP + PP
Sbjct: 1043 PRASGS-HGS---LLLPPASSPPPP 1063
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/160 (30%), Positives = 61/160 (38%), Gaps = 20/160 (12%)
Query: 12 PSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSLLLT 71
PSP+PP P L P PSS++ +PP L T P P T
Sbjct: 941 PSPAPPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQPPGELSLGLATG-PLSTPE---T 996
Query: 72 AAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPAAP 131
Q L+ + G + GF P L+ PG S G TF S P A
Sbjct: 997 PPRQPEPPSLVAGA--SGGASPVGFTPR-GGLSPPGH---SPGPPRTFP----SAPPRAS 1046
Query: 132 GKIGGVSLAVGAAPPPPR-PNRPRCAARGRPTPTRGSTRQ 170
G G + L ++PPPP+ P R RG P T G Q
Sbjct: 1047 GSHGSLLLPPASSPPPPQVPQR-----RGTPPLTPGRLTQ 1081
Score = 31.2 bits (69), Expect = 1.1
Identities = 42/164 (25%), Positives = 55/164 (33%), Gaps = 29/164 (17%)
Query: 10 LSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSLL 69
L P+ SPP +P PPL P ++ + A P L +SP +
Sbjct: 1054 LPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSSGESM 1113
Query: 70 LTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSL-GFCCTFERKRSSVSP 128
A G G SGS+G L PG ++ G T RK SS
Sbjct: 1114 AAFPLFPRAGGG------SGGSGSSG------GLGPPGRPYGAIPGQHVTLPRKTSS--- 1158
Query: 129 AAPGKIGGVSLAVGAAPPPPRPNRPRCAARGRPTPTRGSTRQRG 172
G+ PPP R + G P T G R+ G
Sbjct: 1159 -------------GSLPPPLSLFGARATSSGGPPLTAGPQREPG 1189
Score = 30.0 bits (66), Expect = 2.4
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 19/80 (23%)
Query: 149 RPNRPRCAARGRPTPTRGSTRQRGGAERRSPGHTVTLYSSPGTVDSESPGRDGAGSPTIL 208
R + R + R RP P+ + GG E RS S+ G DSE P R GAG
Sbjct: 40 RQDPSRRSIRLRPLPSPSPSAAAGGTESRS--------SALGAADSEGPAR-GAGKS--- 87
Query: 209 ARAGVAWTVSSSCYRVEGAL 228
+ + C R G+L
Sbjct: 88 -------STNGDCRRFRGSL 100
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 42.4 bits (98), Expect = 5e-04
Identities = 73/267 (27%), Positives = 90/267 (33%), Gaps = 60/267 (22%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLL------------ 58
+P +PP AAP+PP R S + V+ PP +S P L+
Sbjct: 6 APLVAPPRRHGAPAAPSPPPRGSRAGPVVVVAPGPPVTTATSAPVTLVAPGEARPAWVPG 65
Query: 59 ---TSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGF 115
TS+P+P P+ A S V +LT L S AP Q
Sbjct: 66 SAETSAPAPAPAPAPAPAVTGSTVVVLT---------------LEASPEAPKPQ------ 104
Query: 116 CCTFERKRSSVSPAAPGKIGGV----SLAVGAAPPPPRPNRPRCA-ARGRP--TPTRGST 168
S P + GV +LA GA P RP A G P TPTR +
Sbjct: 105 ------LPSGPESPEPAAVAGVETSRALAAGADSPKTEEARPSPAPGPGTPTGTPTRTPS 158
Query: 169 RQRGGAERRSPGHTVTLYSSPG-TVDSESPGRDGAGSPTILARAGVAWTVSSSCYRV--- 224
R GA P L PG TV S R +G T G A S+S +
Sbjct: 159 RTAPGALTAKP----PLAPKPGTTVASGVTARSASGQVT--GGHGAAAATSASAGQAPED 212
Query: 225 -EGALFGSCEVLLLPPGACTSPPGSEP 250
G G P T P EP
Sbjct: 213 PSGPGTGPSGTCEAPVAVVTVTPAPEP 239
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.0 bits (97), Expect = 6e-04
Identities = 48/208 (23%), Positives = 71/208 (34%), Gaps = 31/208 (14%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRR------PPSSTPCP 56
APP + +P+PP+ S P A P PS +++ APP PP++TP P
Sbjct: 168 APPTPS--ATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAP 225
Query: 57 LLTSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFC 116
+S+P T AA + A L T A P T +
Sbjct: 226 PSSSAPPE------TTAAPPTPSATTPAPLSSSAPPET--------TAVPPTPSAT---- 267
Query: 117 CTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNR----PRCAARGRPTPTRGSTRQRG 172
T + +S P S A P P P P PT T +
Sbjct: 268 -TLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETS 326
Query: 173 GAERRSPGHTVTLYSSPGTVDSESPGRD 200
A +VT ++ + +PG++
Sbjct: 327 AAPTHQTTTSVTTQTTTTKQPTSAPGQN 354
>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
sapiens]
Length = 254
Score = 42.0 bits (97), Expect = 6e-04
Identities = 40/144 (27%), Positives = 55/144 (38%), Gaps = 16/144 (11%)
Query: 16 PPACSLPTAAPAP--PLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPSLLLTAA 73
PPA P AAPA P PS+ ++ C A P P + P + P+ P+++ AA
Sbjct: 26 PPAAGPPAAAPAVVYPAAAGPSAASL--CAANPLVPAPAAVRPPVAGPPATAPAVVCPAA 83
Query: 74 AQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPAAPGK 133
A SA L A+ PL ++ AA +LG ++V PAA
Sbjct: 84 AGPSAASLRAAN------------PLAVAPAAVRRPAATLGAASPAAVAPAAVCPAAASP 131
Query: 134 IGGVSLAVGAAPPPPRPNRPRCAA 157
A P P AA
Sbjct: 132 SAASLCAASPTAAAPAAASPAAAA 155
Score = 28.9 bits (63), Expect = 5.4
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 19/88 (21%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPC--PLLTSSPSPL--- 65
+P PA + P AA + SP+ T L P P + PC P L + P+ L
Sbjct: 155 APLAVNPAAAAPAAACVQSVAESPA--TPLAIAQPVSSPAAPAPCAVPPLAAEPTALAYL 212
Query: 66 ----------PSLLLTAAAQESAVGLLT 83
PS +LT QE VGL++
Sbjct: 213 PLHHWPTDVDPSTVLTIRIQE--VGLMS 238
Score = 28.5 bits (62), Expect = 7.0
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 11 SPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSP-SPLPSLL 69
SP+ + PA + P AA + P+ ++ Q+ P + SSP +P P +
Sbjct: 140 SPTAAAPAAASPAAAAPLAVNPAAAAPAAACVQSVAESPATPLAIAQPVSSPAAPAPCAV 199
Query: 70 LTAAAQESAVGLL 82
AA+ +A+ L
Sbjct: 200 PPLAAEPTALAYL 212
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 42.0 bits (97), Expect = 6e-04
Identities = 44/174 (25%), Positives = 63/174 (36%), Gaps = 23/174 (13%)
Query: 1 MHAPPLLGFLSP----SPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPC- 55
+ PP +G +P +PSPPA P A A P P P+ T+ P PP++ P
Sbjct: 238 IQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAV 297
Query: 56 --PLLT-------SSPSPLPSLLLTAAAQ-ESAVGLLTASLLKGDSGSTGFCPLLMSLAA 105
P ++P+P P+ A + G A+ G + P + AA
Sbjct: 298 PPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAES---PKRVVQAA 354
Query: 106 PGTQQCSLGFCCTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRPRCAARG 159
P Q + P G +L AA PPP P P +G
Sbjct: 355 PPAAQTLAASGPASTAASMVIGPTMQG-----ALPSPAAVPPPAPGTPTGLPKG 403
Score = 40.0 bits (92), Expect = 0.002
Identities = 63/262 (24%), Positives = 84/262 (32%), Gaps = 54/262 (20%)
Query: 8 GFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPS 67
G P+ PA P AAP PP P+ + G P R P S PL+ + P+P
Sbjct: 69 GAAGAGPAAPAEGAPGAAPEPP----PAGRARPGGGGPQRPGPPSPRRPLVPAGPAP--- 121
Query: 68 LLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVS 127
A L GS G C + + AA +
Sbjct: 122 --------------PAAKLRPPPEGSAGSCAPVPAAAAVAA--------------GPEPA 153
Query: 128 PAAPGK-IGGVSLAVGAAP-PPPRPNRPRCAARGRPTPTRGSTRQRGGAERRSPGH---- 181
PA P K G +LA A P P P P G+P + G A + H
Sbjct: 154 PAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAP 213
Query: 182 TVTLY-------------SSPGTVDSESPGRDGAGSPTILARAGVAWTVSSSCYRVEGAL 228
V+L ++PGTV P A P A + A ++
Sbjct: 214 AVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPP 273
Query: 229 FGSCEVLLLPPGACTSPPGSEP 250
+ L PPG PP + P
Sbjct: 274 PPAPATLARPPGHPAGPPTAAP 295
Score = 39.3 bits (90), Expect = 0.004
Identities = 80/308 (25%), Positives = 102/308 (33%), Gaps = 81/308 (26%)
Query: 12 PSPSPPACSLPTAAPAPP---LRPSP------------SSKTVLGCQAPPRRPPSST--- 53
P P P L A PAPP LRP P ++ G + P P
Sbjct: 105 PGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPA 164
Query: 54 ---------PCPLLTSSPSPLPSLLLTAAAQESAVGLLTASLLKG-----------DSGS 93
P P P P P A ++ G +A+LL ++G
Sbjct: 165 ALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNG--SAALLNSHHAAAPAVSLVNNGP 222
Query: 94 TGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNRP 153
P L AAPGT + F + +PAAP + A AA PPP P P
Sbjct: 223 AALLP-LPKPAAPGT----VIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAP 277
Query: 154 RCAAR--GRPT--PTRG------STRQRGGAERRSP------GHTVTLYSSPGT------ 191
AR G P PT + Q GG+ +P G + PG
Sbjct: 278 ATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAA 337
Query: 192 ----VDSESPGRDGAGSP---TILARAGVAWTVSSSCYRVEGALFGSCEVLLLPPGACTS 244
V +ESP R +P LA +G A T +S + G LP A
Sbjct: 338 PAPGVKAESPKRVVQAAPPAAQTLAASGPASTAAS-------MVIGPTMQGALPSPAAVP 390
Query: 245 PPGSEPPT 252
PP PT
Sbjct: 391 PPAPGTPT 398
Score = 32.0 bits (71), Expect = 0.63
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 11 SPSPSPPACSLPTAAPAPPL---RPSPSSKTVLGCQAPPRRPPSSTPCPLLTSSPSPLPS 67
+P+ +PP AP P+ + +P++ QA PS+T L SP P
Sbjct: 494 TPTSAPPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPSAT----LQRSPGVQPQ 549
Query: 68 LLLTAAAQESAVGLLTA 84
L+L AAQ +++G TA
Sbjct: 550 LVLGGAAQTASLGTATA 566
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.0 bits (97), Expect = 6e-04
Identities = 48/208 (23%), Positives = 71/208 (34%), Gaps = 31/208 (14%)
Query: 3 APPLLGFLSPSPSPPACSLPTAAPAPPLRPSPSSKTVLGCQAPPRR------PPSSTPCP 56
APP + +P+PP+ S P A P PS +++ APP PP++TP P
Sbjct: 168 APPTPS--ATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAP 225
Query: 57 LLTSSPSPLPSLLLTAAAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFC 116
+S+P T AA + A L T A P T +
Sbjct: 226 PSSSAPPE------TTAAPPTPSATTPAPLSSSAPPET--------TAVPPTPSAT---- 267
Query: 117 CTFERKRSSVSPAAPGKIGGVSLAVGAAPPPPRPNR----PRCAARGRPTPTRGSTRQRG 172
T + +S P S A P P P P PT T +
Sbjct: 268 -TLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETS 326
Query: 173 GAERRSPGHTVTLYSSPGTVDSESPGRD 200
A +VT ++ + +PG++
Sbjct: 327 AAPTHQTTTSVTTQTTTTKQPTSAPGQN 354
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,929,266
Number of Sequences: 37866
Number of extensions: 1162112
Number of successful extensions: 17582
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 1034
Number of HSP's that attempted gapping in prelim test: 9955
Number of HSP's gapped (non-prelim): 6192
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.