BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239751617 PREDICTED: hypothetical protein XP_002347930 [Homo sapiens] (238 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239751617 PREDICTED: hypothetical protein XP_002347930 [Homo ... 507 e-144 gi|239757324 PREDICTED: hypothetical protein XP_002345241 [Homo ... 33 0.22 gi|239751831 PREDICTED: hypothetical protein XP_002348009 [Homo ... 33 0.22 gi|239746324 PREDICTED: hypothetical protein XP_002343730 [Homo ... 33 0.22 gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 33 0.22 gi|239754810 PREDICTED: hypothetical protein [Homo sapiens] 32 0.37 gi|239744258 PREDICTED: hypothetical protein LOC100128703 [Homo ... 32 0.37 gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 32 0.37 gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo ... 32 0.48 gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 32 0.63 gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 32 0.63 gi|119508426 alpha 3 type IX collagen [Homo sapiens] 32 0.63 gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 32 0.63 gi|18860857 menin isoform 1 [Homo sapiens] 31 0.82 gi|18860855 menin isoform 1 [Homo sapiens] 31 0.82 gi|18860851 menin isoform 1 [Homo sapiens] 31 0.82 gi|18860849 menin isoform 1 [Homo sapiens] 31 0.82 gi|18860853 menin isoform 1 [Homo sapiens] 31 0.82 gi|18860839 menin isoform 1 [Homo sapiens] 31 0.82 gi|18860847 menin isoform 2 [Homo sapiens] 31 0.82 gi|146219841 PNMA-like 2 [Homo sapiens] 31 1.1 gi|228008295 synaptotagmin binding, cytoplasmic RNA interacting ... 30 1.4 gi|228008291 synaptotagmin binding, cytoplasmic RNA interacting ... 30 1.4 gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 30 1.4 gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 30 1.4 gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 30 1.4 gi|222537754 hypothetical protein LOC375337 [Homo sapiens] 30 1.8 gi|145699133 KPL2 protein isoform 1 [Homo sapiens] 30 1.8 gi|58218966 hypothetical protein LOC339201 [Homo sapiens] 30 1.8 gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 30 2.4 >gi|239751617 PREDICTED: hypothetical protein XP_002347930 [Homo sapiens] Length = 238 Score = 507 bits (1305), Expect = e-144 Identities = 238/238 (100%), Positives = 238/238 (100%) Query: 1 MPGRTGLAGEMPVGWGPGRAGASEPNESTCAPEALDGHLGVARREGPILGTLLGRGKGHC 60 MPGRTGLAGEMPVGWGPGRAGASEPNESTCAPEALDGHLGVARREGPILGTLLGRGKGHC Sbjct: 1 MPGRTGLAGEMPVGWGPGRAGASEPNESTCAPEALDGHLGVARREGPILGTLLGRGKGHC 60 Query: 61 QALSQLGHCPSPAWNNYSGMMDIGVAPSRVGPSGHCGVLRSHSRPGELAVVMNHKVPRHR 120 QALSQLGHCPSPAWNNYSGMMDIGVAPSRVGPSGHCGVLRSHSRPGELAVVMNHKVPRHR Sbjct: 61 QALSQLGHCPSPAWNNYSGMMDIGVAPSRVGPSGHCGVLRSHSRPGELAVVMNHKVPRHR 120 Query: 121 PVSSVGTELLWVRCAPKMVQLPICCLLLTPAPGIGPRAHGHLHTNLETRGLPRGTRESQQ 180 PVSSVGTELLWVRCAPKMVQLPICCLLLTPAPGIGPRAHGHLHTNLETRGLPRGTRESQQ Sbjct: 121 PVSSVGTELLWVRCAPKMVQLPICCLLLTPAPGIGPRAHGHLHTNLETRGLPRGTRESQQ 180 Query: 181 AEGEGEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAGEPPLVDCSTAGT 238 AEGEGEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAGEPPLVDCSTAGT Sbjct: 181 AEGEGEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAGEPPLVDCSTAGT 238 >gi|239757324 PREDICTED: hypothetical protein XP_002345241 [Homo sapiens] Length = 582 Score = 33.1 bits (74), Expect = 0.22 Identities = 19/54 (35%), Positives = 23/54 (42%) Query: 160 GHLHTNLETRGLPRGTRESQQAEGEGEAIQEGRGACKRAQRKEGEGPRGPCVVR 213 GHLH P G ESQ+AE E+ QE Q G+ P C +R Sbjct: 155 GHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIR 208 >gi|239751831 PREDICTED: hypothetical protein XP_002348009 [Homo sapiens] Length = 589 Score = 33.1 bits (74), Expect = 0.22 Identities = 19/54 (35%), Positives = 23/54 (42%) Query: 160 GHLHTNLETRGLPRGTRESQQAEGEGEAIQEGRGACKRAQRKEGEGPRGPCVVR 213 GHLH P G ESQ+AE E+ QE Q G+ P C +R Sbjct: 162 GHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIR 215 >gi|239746324 PREDICTED: hypothetical protein XP_002343730 [Homo sapiens] Length = 329 Score = 33.1 bits (74), Expect = 0.22 Identities = 19/54 (35%), Positives = 23/54 (42%) Query: 160 GHLHTNLETRGLPRGTRESQQAEGEGEAIQEGRGACKRAQRKEGEGPRGPCVVR 213 GHLH P G ESQ+AE E+ QE Q G+ P C +R Sbjct: 162 GHLHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIR 215 >gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sapiens] Length = 2715 Score = 33.1 bits (74), Expect = 0.22 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 14/68 (20%) Query: 151 APGIGPRAHGHLHTNLETRGLPRGTRESQQAEGEGEAIQEGRGACKRAQRKEGEGPRGPC 210 APG+ P A + G+ GT + E EA+Q+ RG +G P GP Sbjct: 2044 APGLAPSATPGAPRIEQLDGVDDGT------DSEAEAVQQPRG--------QGTPPSGPG 2089 Query: 211 VVRAGGVG 218 VVRAG +G Sbjct: 2090 VVRAGVLG 2097 >gi|239754810 PREDICTED: hypothetical protein [Homo sapiens] Length = 421 Score = 32.3 bits (72), Expect = 0.37 Identities = 61/285 (21%), Positives = 95/285 (33%), Gaps = 110/285 (38%) Query: 16 GPGRAGASEPNESTCAPEA---------LDGHLGVARREGPILGTLLGRGKGHCQALSQL 66 G G+ G+S P E++ + LDGH P+ L + Q Sbjct: 7 GDGQTGSSLPVEASMVTPSPGCSVHTGDLDGH--------PLPRMLSAHRRSRWSPPPQD 58 Query: 67 GHC--------PSPAWNNYSGMMD----------------------------IGVAPSRV 90 G C PSP W+ ++G +D I + Sbjct: 59 GQCTPEISMVTPSPGWSVHTGDLDGHPLPRMVSAHRRSRWSPPPQDGQCTPEISMVTPSP 118 Query: 91 GPSGHCGVLRSHSRPGELAVVMNHKVPRHRPVSSVGTELLWVRCAPKMVQLPICCLLLTP 150 G S H G L H P +V H+ R P G +C P++ ++TP Sbjct: 119 GWSVHTGDLDGHPLP---RMVSAHRRSRWSPPPQDG------QCTPEI-------SMVTP 162 Query: 151 APGIGPRAHGHLHT-NLETRGLPRGTRESQQAE---------GEGEAIQEGRGACKRAQR 200 +PG +HT +L+ LPR +++ GE +QE + +C R+ Sbjct: 163 SPG------WSVHTGDLDGHPLPRMVSAHRRSRWLGPPVPVVRVGEEVQEPQSSCSRSPG 216 Query: 201 KEGEGP---------------------RGPC----VVRAGGVGWG 220 + GP +GPC + G+GWG Sbjct: 217 SQRLGPSQRPLGHEEGQQQPELRMASRKGPCQPLSQTWSVGIGWG 261 >gi|239744258 PREDICTED: hypothetical protein LOC100128703 [Homo sapiens] Length = 389 Score = 32.3 bits (72), Expect = 0.37 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 7/96 (7%) Query: 6 GLAGEMPVGWGPGRAGASEPNESTCAPEALDGHLGVARREGPILGTLLGRGKGHCQALSQ 65 G GE V W GR ++ A G GV REGP+ L RG + + Sbjct: 206 GEKGECGVPWREGRVWRPLERRASVASPGQKGECGVPWREGPVWRPLERRGS--VASPGE 263 Query: 66 LGHCPSPAWNNYSGM---MDIGVAPSRVGPSGHCGV 98 G C P W G+ ++ + + G G CGV Sbjct: 264 KGECGVP-WTE-GGVWRPLERRASVASPGEKGECGV 297 >gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] Length = 274 Score = 32.3 bits (72), Expect = 0.37 Identities = 37/122 (30%), Positives = 45/122 (36%), Gaps = 24/122 (19%) Query: 86 APSRVGPSGHCGVLRSHSRPGELAVVMNHKVPRHRPVSSVGTELLWVRCAPKMVQLPICC 145 AP+R GP+G R RPG A + P P T L R P L +C Sbjct: 142 APARTGPAGKAAADRG--RPGPAAGRRVRRSPSFPPFLLAQTRL--GRTGP----LALCL 193 Query: 146 LLLTPAPGIGPRAHGHLHTNLETRGLPRGTRESQQAEGEGEAIQEGRGACKRAQRKEGEG 205 LLL HG + L G+RE G A + GRG R +E G Sbjct: 194 LLLL---------HGAMR-------LGGGSREKLACGRAGRAARTGRGEGGRRAEEEAAG 237 Query: 206 PR 207 R Sbjct: 238 RR 239 >gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo sapiens] Length = 1386 Score = 32.0 bits (71), Expect = 0.48 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 8/67 (11%) Query: 169 RGLPRGTRESQQAEGEGEAIQEGRGACKRAQRKE--GEGPRGP---CVVRAGGVGWGTRQ 223 RGLP GT+ + + +G QEG GA + + E P GP V GG G + Sbjct: 732 RGLPPGTQIQIKVQAQG---QEGLGAESLSVTRSIPEEAPSGPPQGVAVALGGDGNSSIT 788 Query: 224 VAGEPPL 230 V+ EPPL Sbjct: 789 VSWEPPL 795 >gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] Length = 1073 Score = 31.6 bits (70), Expect = 0.63 Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 1 MPGRTGLAGEMPVGWGPGRAGASEPNESTCAPEALDGHLGVARREGPILGTLLGRGKGHC 60 +PG G G+ V PGR G +E + P L G G+A +G +G Sbjct: 571 LPGLPGFKGDKGVPGKPGREG-TEGKKGEAGPPGLPGPPGIAGPQG---------SQGER 620 Query: 61 QALSQLGHCPSPAWNNYSGMMDIGVAPSRVGPSGHCGVLRSHSRPG 106 A ++G G M P GP G G+ + PG Sbjct: 621 GADGEVGQKGDQGHPGVPGFMG---PPGNPGPPGADGIAGAAGPPG 663 >gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo sapiens] Length = 1152 Score = 31.6 bits (70), Expect = 0.63 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%) Query: 167 ETRGLPRGTRESQQAEGEGEAIQEGRGACKRAQRKEGEG 205 E G G E ++ EGEGE +EG G + +EGEG Sbjct: 884 EGEGEEEGEGEGEEEEGEGEGEEEGEG---EGEEEEGEG 919 Score = 30.0 bits (66), Expect = 1.8 Identities = 14/39 (35%), Positives = 20/39 (51%) Query: 167 ETRGLPRGTRESQQAEGEGEAIQEGRGACKRAQRKEGEG 205 E G G E ++ EGEG+ +EG + +EGEG Sbjct: 901 EGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEG 939 Score = 29.6 bits (65), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Query: 174 GTRESQQAEGEGEAIQEGRGACKRAQRKEGEG 205 G E ++ EGEGE +EG G + +EGEG Sbjct: 874 GEGEGEEEEGEGEGEEEGEG---EGEEEEGEG 902 Score = 28.1 bits (61), Expect = 7.0 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%) Query: 174 GTRESQQAEGEGEAIQEGRGACKRAQRKEGEG 205 G E ++ EGEGE +EG G + EGEG Sbjct: 953 GEWEGEEEEGEGEGEEEGEG---EGEEGEGEG 981 Score = 27.7 bits (60), Expect = 9.1 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 174 GTRESQQAEGEGEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQ 223 G E ++ EGEGE +EG G + EGE G G G G + Sbjct: 867 GEEEGEEGEGEGEE-EEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEE 915 >gi|119508426 alpha 3 type IX collagen [Homo sapiens] Length = 684 Score = 31.6 bits (70), Expect = 0.63 Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 7/106 (6%) Query: 1 MPGRTGLAGEMPVGWGPGRAGASEPNESTCAPEALDGHLGVARREGPILGTLLGRGKGHC 60 +PG GL G++ GPG A + ++ + L G G G L+G KG Sbjct: 416 LPGPQGLRGDVG-DRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSG-----LVGP-KGES 468 Query: 61 QALSQLGHCPSPAWNNYSGMMDIGVAPSRVGPSGHCGVLRSHSRPG 106 + +LG + N SG+ + P +G G GV +PG Sbjct: 469 GSRGELGPKGTQGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPG 514 >gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] Length = 1626 Score = 31.6 bits (70), Expect = 0.63 Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 1 MPGRTGLAGEMPVGWGPGRAGASEPNESTCAPEALDGHLGVARREGPILGTLLGRGKGHC 60 +PG G G+ V PGR G +E + P L G G+A +G +G Sbjct: 1124 LPGLPGFKGDKGVPGKPGREG-TEGKKGEAGPPGLPGPPGIAGPQG---------SQGER 1173 Query: 61 QALSQLGHCPSPAWNNYSGMMDIGVAPSRVGPSGHCGVLRSHSRPG 106 A ++G G M P GP G G+ + PG Sbjct: 1174 GADGEVGQKGDQGHPGVPGFMG---PPGNPGPPGADGIAGAAGPPG 1216 >gi|18860857 menin isoform 1 [Homo sapiens] Length = 615 Score = 31.2 bits (69), Expect = 0.82 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 175 TRESQQAEGE---GEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAGEPPLV 231 +RE++ AE E GE +EGR R + K E P G+G G V+G P Sbjct: 464 SREAEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKP 523 Query: 232 DCSTAGT 238 + AGT Sbjct: 524 PGTVAGT 530 >gi|18860855 menin isoform 1 [Homo sapiens] Length = 615 Score = 31.2 bits (69), Expect = 0.82 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 175 TRESQQAEGE---GEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAGEPPLV 231 +RE++ AE E GE +EGR R + K E P G+G G V+G P Sbjct: 464 SREAEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKP 523 Query: 232 DCSTAGT 238 + AGT Sbjct: 524 PGTVAGT 530 >gi|18860851 menin isoform 1 [Homo sapiens] Length = 615 Score = 31.2 bits (69), Expect = 0.82 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 175 TRESQQAEGE---GEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAGEPPLV 231 +RE++ AE E GE +EGR R + K E P G+G G V+G P Sbjct: 464 SREAEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKP 523 Query: 232 DCSTAGT 238 + AGT Sbjct: 524 PGTVAGT 530 >gi|18860849 menin isoform 1 [Homo sapiens] Length = 615 Score = 31.2 bits (69), Expect = 0.82 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 175 TRESQQAEGE---GEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAGEPPLV 231 +RE++ AE E GE +EGR R + K E P G+G G V+G P Sbjct: 464 SREAEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKP 523 Query: 232 DCSTAGT 238 + AGT Sbjct: 524 PGTVAGT 530 >gi|18860853 menin isoform 1 [Homo sapiens] Length = 615 Score = 31.2 bits (69), Expect = 0.82 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 175 TRESQQAEGE---GEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAGEPPLV 231 +RE++ AE E GE +EGR R + K E P G+G G V+G P Sbjct: 464 SREAEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKP 523 Query: 232 DCSTAGT 238 + AGT Sbjct: 524 PGTVAGT 530 >gi|18860839 menin isoform 1 [Homo sapiens] Length = 615 Score = 31.2 bits (69), Expect = 0.82 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 175 TRESQQAEGE---GEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAGEPPLV 231 +RE++ AE E GE +EGR R + K E P G+G G V+G P Sbjct: 464 SREAEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKP 523 Query: 232 DCSTAGT 238 + AGT Sbjct: 524 PGTVAGT 530 >gi|18860847 menin isoform 2 [Homo sapiens] Length = 610 Score = 31.2 bits (69), Expect = 0.82 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 175 TRESQQAEGE---GEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAGEPPLV 231 +RE++ AE E GE +EGR R + K E P G+G G V+G P Sbjct: 459 SREAEAAEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKP 518 Query: 232 DCSTAGT 238 + AGT Sbjct: 519 PGTVAGT 525 >gi|146219841 PNMA-like 2 [Homo sapiens] Length = 635 Score = 30.8 bits (68), Expect = 1.1 Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 12/86 (13%) Query: 148 LTPAPGIGPRAHGHLHTNLETRGLPRGTRESQQAEGEGEAIQE-----------GRGACK 196 LTPA G P A G T RG RG ++A G A + G GA Sbjct: 545 LTPA-GAPPTASGARKTRAGGRGRGRGVTPEKKAGSRGSAQDDAAGSRKKKGSAGAGAHA 603 Query: 197 RAQRKEGEGPRGPCVVRAGGVGWGTR 222 RA +G+ P G R G R Sbjct: 604 RAGEAKGQAPTGSKAARGKKARRGRR 629 >gi|228008295 synaptotagmin binding, cytoplasmic RNA interacting protein isoform 4 [Homo sapiens] Length = 588 Score = 30.4 bits (67), Expect = 1.4 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 172 PRGTRESQQAEGEGEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAG 226 PRG Q G G A + RGA AQ++ G G RG R G VG G R+ G Sbjct: 482 PRGRAGYSQRGGPGSA-RGVRGARGGAQQQRGRGVRGARGGRGGNVG-GKRKADG 534 >gi|228008291 synaptotagmin binding, cytoplasmic RNA interacting protein isoform 1 [Homo sapiens] Length = 623 Score = 30.4 bits (67), Expect = 1.4 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 172 PRGTRESQQAEGEGEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWGTRQVAG 226 PRG Q G G A + RGA AQ++ G G RG R G VG G R+ G Sbjct: 517 PRGRAGYSQRGGPGSA-RGVRGARGGAQQQRGRGVRGARGGRGGNVG-GKRKADG 569 >gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] Length = 113 Score = 30.4 bits (67), Expect = 1.4 Identities = 14/48 (29%), Positives = 20/48 (41%) Query: 173 RGTRESQQAEGEGEAIQEGRGACKRAQRKEGEGPRGPCVVRAGGVGWG 220 R S G+ + GRG+ +R R++ GP P G WG Sbjct: 15 RARAPSGGGSGQAQRPGPGRGSWRRPPRRQRPGPAAPSPPARGAAAWG 62 >gi|166795264 AE binding protein 2 isoform b [Homo sapiens] Length = 517 Score = 30.4 bits (67), Expect = 1.4 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 167 ETRGLPRGTRESQQAEGEG-EAIQEGRGACKRAQRKEGEGPRGPCVVRAGG-VGWGT 221 ETR L G S +G+G E ++E +G + +Q G G VV +GG G+GT Sbjct: 136 ETRSLSPGAASSSSGDGDGKEGLEEPKGP-RGSQGGGGGGSSSSSVVSSGGDEGYGT 191 >gi|166795262 AE binding protein 2 isoform a [Homo sapiens] Length = 503 Score = 30.4 bits (67), Expect = 1.4 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 167 ETRGLPRGTRESQQAEGEG-EAIQEGRGACKRAQRKEGEGPRGPCVVRAGG-VGWGT 221 ETR L G S +G+G E ++E +G + +Q G G VV +GG G+GT Sbjct: 136 ETRSLSPGAASSSSGDGDGKEGLEEPKGP-RGSQGGGGGGSSSSSVVSSGGDEGYGT 191 >gi|222537754 hypothetical protein LOC375337 [Homo sapiens] Length = 1692 Score = 30.0 bits (66), Expect = 1.8 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 151 APGIGPRAHGHLHTNLETRGLPRGTRESQQAEGEGEAIQEGRGACKRAQRKEGEGPRGP 209 A G GP A G + R + R T + E + G G +A R++ EG RGP Sbjct: 33 AGGCGPEAGGCRENKQKRRMVARATPGRGEVESDKSVAASGAG---KAARRQVEGRRGP 88 >gi|145699133 KPL2 protein isoform 1 [Homo sapiens] Length = 1822 Score = 30.0 bits (66), Expect = 1.8 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 133 RCAPKMVQLPICCLLLTPAPGIGPRAHGHLHTNLETRGLP--RGTRESQQAEGEGEAIQE 190 + A + +LP+ PAP P +H + P +G +S+ G+ E++QE Sbjct: 901 KAAASLAELPLPTP--PPAPPPEPEKEKEIHQSHVASKTPTAKGKPQSEAPHGKQESLQE 958 Query: 191 GRGACKRAQRKEGEGPRG 208 G+G K P+G Sbjct: 959 GKGKKGETALKRKGSPKG 976 >gi|58218966 hypothetical protein LOC339201 [Homo sapiens] Length = 193 Score = 30.0 bits (66), Expect = 1.8 Identities = 33/116 (28%), Positives = 40/116 (34%), Gaps = 18/116 (15%) Query: 15 WG-PGRAGASEPNESTCAPEALDGHLG----VARREGPILGTLLGRGKGHCQALSQLGHC 69 WG PGR A P C P G A R GP R + H + + G C Sbjct: 30 WGSPGRPAAHSP--WACGPPHWGPQRGPRNAAAARPGP-------RSRWHKRCAAACGAC 80 Query: 70 PSPAWNNY----SGMMDIGVAPSRVGPSGHCGVLRSHSRPGELAVVMNHKVPRHRP 121 P + +G GVA S +GP + SRPG A P P Sbjct: 81 ARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTEP 136 >gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo sapiens] Length = 1487 Score = 29.6 bits (65), Expect = 2.4 Identities = 31/116 (26%), Positives = 38/116 (32%), Gaps = 20/116 (17%) Query: 2 PGRTGLAGEMPVGWGPGRAGASEPN--------ESTCAPEALDGHLGVARREGPILGTLL 53 PG G G+ PG+AG P T + GH G +G Sbjct: 245 PGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDG------- 297 Query: 54 GRGKGHCQALSQLGHCPSPAWNNYSGMMDIGVAP---SRVGPSGHCGVLRSHSRPG 106 KG A G SP N G M P R GP+G G + +PG Sbjct: 298 --AKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPG 351 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.317 0.138 0.449 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,736,802 Number of Sequences: 37866 Number of extensions: 646825 Number of successful extensions: 2318 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 67 Number of HSP's that attempted gapping in prelim test: 2228 Number of HSP's gapped (non-prelim): 160 length of query: 238 length of database: 18,247,518 effective HSP length: 99 effective length of query: 139 effective length of database: 14,498,784 effective search space: 2015330976 effective search space used: 2015330976 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.