Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239750685
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750685 PREDICTED: hypothetical protein XP_002347506 [Homo
sapiens]
(684 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750685 PREDICTED: hypothetical protein XP_002347506 [Homo ... 1437 0.0
gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo ... 1257 0.0
gi|239756161 PREDICTED: hypothetical protein [Homo sapiens] 481 e-135
gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens] 40 0.005
gi|33286436 gametogenetin [Homo sapiens] 38 0.035
gi|155029552 hypothetical protein LOC388115 [Homo sapiens] 37 0.079
gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 ... 36 0.10
gi|14249534 hypothetical protein LOC84915 [Homo sapiens] 36 0.10
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 36 0.13
gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo sap... 36 0.13
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 36 0.13
gi|61966733 hypothetical protein LOC388199 [Homo sapiens] 36 0.13
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 35 0.23
gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1... 35 0.23
gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo sapi... 35 0.30
gi|148839382 ring finger protein 169 [Homo sapiens] 35 0.30
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 35 0.30
gi|222352129 von Willebrand factor A domain containing 5B2 [Homo... 34 0.39
gi|148613882 homeobox A4 [Homo sapiens] 34 0.39
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 34 0.39
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 34 0.39
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 34 0.39
gi|110832843 TBP-associated factor 4 [Homo sapiens] 34 0.39
gi|95147559 ankyrin repeat domain 43 [Homo sapiens] 34 0.39
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 33 0.67
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 33 0.67
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 33 0.67
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 33 0.67
gi|126352446 elastin isoform d precursor [Homo sapiens] 33 0.87
gi|126352322 elastin isoform c precursor [Homo sapiens] 33 0.87
>gi|239750685 PREDICTED: hypothetical protein XP_002347506 [Homo
sapiens]
Length = 684
Score = 1437 bits (3719), Expect = 0.0
Identities = 684/684 (100%), Positives = 684/684 (100%)
Query: 1 MGWPSFCQAAWDSGAVSSEQESRTNCPRAACTNEGSTPAKLILERRSCGRVALVIRHLHP 60
MGWPSFCQAAWDSGAVSSEQESRTNCPRAACTNEGSTPAKLILERRSCGRVALVIRHLHP
Sbjct: 1 MGWPSFCQAAWDSGAVSSEQESRTNCPRAACTNEGSTPAKLILERRSCGRVALVIRHLHP 60
Query: 61 VQGPWTQAPAPMAILQRPGCGGPPLAQAVGLAARDHQKARAFSAPRPLSCAGWVPARLQD 120
VQGPWTQAPAPMAILQRPGCGGPPLAQAVGLAARDHQKARAFSAPRPLSCAGWVPARLQD
Sbjct: 61 VQGPWTQAPAPMAILQRPGCGGPPLAQAVGLAARDHQKARAFSAPRPLSCAGWVPARLQD 120
Query: 121 CCRHHPCGCSFQKPQAGDDGAHGEIPGSCSCTLAPRQSYWHCHGSRHTRSGYIGPQRQRS 180
CCRHHPCGCSFQKPQAGDDGAHGEIPGSCSCTLAPRQSYWHCHGSRHTRSGYIGPQRQRS
Sbjct: 121 CCRHHPCGCSFQKPQAGDDGAHGEIPGSCSCTLAPRQSYWHCHGSRHTRSGYIGPQRQRS 180
Query: 181 TSGQPSLRKSHGHWAAGTARGCFHQSLSTVQTCPRLVPQQPSPTELEPLGGQTLTVEATA 240
TSGQPSLRKSHGHWAAGTARGCFHQSLSTVQTCPRLVPQQPSPTELEPLGGQTLTVEATA
Sbjct: 181 TSGQPSLRKSHGHWAAGTARGCFHQSLSTVQTCPRLVPQQPSPTELEPLGGQTLTVEATA 240
Query: 241 LDLGLPPVLSPPYDFVQPAGPQGSLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGM 300
LDLGLPPVLSPPYDFVQPAGPQGSLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGM
Sbjct: 241 LDLGLPPVLSPPYDFVQPAGPQGSLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGM 300
Query: 301 GAAAERERGPGLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSIPLGLTLVKGQ 360
GAAAERERGPGLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSIPLGLTLVKGQ
Sbjct: 301 GAAAERERGPGLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSIPLGLTLVKGQ 360
Query: 361 LLERLCSPMRGAALPGPGCKDPEERAALWPHAKPSPPPSQEARCHQGQAVTGWHQPCGEP 420
LLERLCSPMRGAALPGPGCKDPEERAALWPHAKPSPPPSQEARCHQGQAVTGWHQPCGEP
Sbjct: 361 LLERLCSPMRGAALPGPGCKDPEERAALWPHAKPSPPPSQEARCHQGQAVTGWHQPCGEP 420
Query: 421 VTCRLPVPTHSLGPSKAPRSRPVQLGGLVPFPPKFLGLIMGRGAGKVSPLGLRARVKIAG 480
VTCRLPVPTHSLGPSKAPRSRPVQLGGLVPFPPKFLGLIMGRGAGKVSPLGLRARVKIAG
Sbjct: 421 VTCRLPVPTHSLGPSKAPRSRPVQLGGLVPFPPKFLGLIMGRGAGKVSPLGLRARVKIAG 480
Query: 481 TPVSWPWLALAHVVGVGLMVDGAEHQAGLGLRGGAPGMESLRGQVPLSTPLVMQDGAGCW 540
TPVSWPWLALAHVVGVGLMVDGAEHQAGLGLRGGAPGMESLRGQVPLSTPLVMQDGAGCW
Sbjct: 481 TPVSWPWLALAHVVGVGLMVDGAEHQAGLGLRGGAPGMESLRGQVPLSTPLVMQDGAGCW 540
Query: 541 QGPGRLDGPVPIEVVFPTNILHSCAEETASEVPAGSSLVDEDAGGTHGNYEDLARAGTGK 600
QGPGRLDGPVPIEVVFPTNILHSCAEETASEVPAGSSLVDEDAGGTHGNYEDLARAGTGK
Sbjct: 541 QGPGRLDGPVPIEVVFPTNILHSCAEETASEVPAGSSLVDEDAGGTHGNYEDLARAGTGK 600
Query: 601 EGTGKEGGRQLPLVGTTPTSAEVISVKGACDGVAGRAVTPTPQTLVLLLGRVQLVITADN 660
EGTGKEGGRQLPLVGTTPTSAEVISVKGACDGVAGRAVTPTPQTLVLLLGRVQLVITADN
Sbjct: 601 EGTGKEGGRQLPLVGTTPTSAEVISVKGACDGVAGRAVTPTPQTLVLLLGRVQLVITADN 660
Query: 661 LWAEMREAGETASWPHQALGPVAS 684
LWAEMREAGETASWPHQALGPVAS
Sbjct: 661 LWAEMREAGETASWPHQALGPVAS 684
>gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo
sapiens]
Length = 909
Score = 1257 bits (3252), Expect = 0.0
Identities = 593/596 (99%), Positives = 594/596 (99%)
Query: 1 MGWPSFCQAAWDSGAVSSEQESRTNCPRAACTNEGSTPAKLILERRSCGRVALVIRHLHP 60
MGWPSFCQAAWDSGAVSSEQESRTNCPRAACTNEGSTPAKLILERRSCGRVALVIRHLHP
Sbjct: 1 MGWPSFCQAAWDSGAVSSEQESRTNCPRAACTNEGSTPAKLILERRSCGRVALVIRHLHP 60
Query: 61 VQGPWTQAPAPMAILQRPGCGGPPLAQAVGLAARDHQKARAFSAPRPLSCAGWVPARLQD 120
VQGPWTQAPAPMAILQRPGCGGPPLAQAVGLAARDHQKARAFSAPRPLSCAGWVPARLQD
Sbjct: 61 VQGPWTQAPAPMAILQRPGCGGPPLAQAVGLAARDHQKARAFSAPRPLSCAGWVPARLQD 120
Query: 121 CCRHHPCGCSFQKPQAGDDGAHGEIPGSCSCTLAPRQSYWHCHGSRHTRSGYIGPQRQRS 180
CCRHHPCGCSFQKPQAGDDGAHGEIPGSCSCTLAPRQSYWHCHGSRHTRSGYIGPQRQRS
Sbjct: 121 CCRHHPCGCSFQKPQAGDDGAHGEIPGSCSCTLAPRQSYWHCHGSRHTRSGYIGPQRQRS 180
Query: 181 TSGQPSLRKSHGHWAAGTARGCFHQSLSTVQTCPRLVPQQPSPTELEPLGGQTLTVEATA 240
TSGQPSLRKSHGHWAAGTARGCFHQSLSTVQTCPRLVPQQPSPTELEPLGGQTLTVEATA
Sbjct: 181 TSGQPSLRKSHGHWAAGTARGCFHQSLSTVQTCPRLVPQQPSPTELEPLGGQTLTVEATA 240
Query: 241 LDLGLPPVLSPPYDFVQPAGPQGSLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGM 300
LDLG+PPVLSPPYDFVQPAGPQGSLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGM
Sbjct: 241 LDLGMPPVLSPPYDFVQPAGPQGSLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGM 300
Query: 301 GAAAERERGPGLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSIPLGLTLVKGQ 360
GAAAERERGPGLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSIPLGLTLVKGQ
Sbjct: 301 GAAAERERGPGLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSIPLGLTLVKGQ 360
Query: 361 LLERLCSPMRGAALPGPGCKDPEERAALWPHAKPSPPPSQEARCHQGQAVTGWHQPCGEP 420
LLERLCSPMRGAALPGPGCKDPEERAALWPHAKPSPPPSQEARCHQGQAVTGWHQPCGEP
Sbjct: 361 LLERLCSPMRGAALPGPGCKDPEERAALWPHAKPSPPPSQEARCHQGQAVTGWHQPCGEP 420
Query: 421 VTCRLPVPTHSLGPSKAPRSRPVQLGGLVPFPPKFLGLIMGRGAGKVSPLGLRARVKIAG 480
VTCRLPVPTHSLGPSKAPRSRPVQLGGLVPFPPKFLGLIMGRGAGKVSPLGLRARVKIAG
Sbjct: 421 VTCRLPVPTHSLGPSKAPRSRPVQLGGLVPFPPKFLGLIMGRGAGKVSPLGLRARVKIAG 480
Query: 481 TPVSWPWLALAHVVGVGLMVDGAEHQAGLGLRGGAPGMESLRGQVPLSTPLVMQDGAGCW 540
TPVSWPWLALAHVVGVGLMVDGAEHQAGLGLRGGAPGMESLRGQVPLSTPLVMQDGAGCW
Sbjct: 481 TPVSWPWLALAHVVGVGLMVDGAEHQAGLGLRGGAPGMESLRGQVPLSTPLVMQDGAGCW 540
Query: 541 QGPGRLDGPVPIEVVFPTNILHSCAEETASEVPAGSSLVDEDAGGTHGNYEDLARA 596
QGPGRLDGPVPIEVVFPTNILHSCAEETASEVPAGSSLVDEDAGGTHGNYEDL A
Sbjct: 541 QGPGRLDGPVPIEVVFPTNILHSCAEETASEVPAGSSLVDEDAGGTHGNYEDLVVA 596
>gi|239756161 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 481 bits (1237), Expect = e-135
Identities = 229/259 (88%), Positives = 229/259 (88%), Gaps = 30/259 (11%)
Query: 1 MGWPSFCQAAWDSGAVSSEQESRTNCPRAACTNEGSTPAKLILERRSCGRVALVIRHLHP 60
MGWPSFCQAAWDSGAVSSEQESRTNCPRAACTNEGSTPAKLILERRSCGRVALVIRHLHP
Sbjct: 1 MGWPSFCQAAWDSGAVSSEQESRTNCPRAACTNEGSTPAKLILERRSCGRVALVIRHLHP 60
Query: 61 VQGPWTQAPAPMAILQRPGCGGPPLAQAVGLAARDHQKARAFSAPRPLSCAGWVPARLQD 120
VQGPWTQAPAPMAILQRPGCGGPPLAQAVGLAARDHQKARAFSAPRPLSCAGWVPARLQD
Sbjct: 61 VQGPWTQAPAPMAILQRPGCGGPPLAQAVGLAARDHQKARAFSAPRPLSCAGWVPARLQD 120
Query: 121 CCRHHPCGCSFQKPQAGDDGAHGEIPGSCSCTLAPRQSYWHCHGSRHTRSGYIGPQRQRS 180
CCRHHPCGCSFQKPQAGDDGAHGEIPGSCSCTLAPRQSYWHCHGSRHTRSGYIGPQRQRS
Sbjct: 121 CCRHHPCGCSFQKPQAGDDGAHGEIPGSCSCTLAPRQSYWHCHGSRHTRSGYIGPQRQRS 180
Query: 181 TSGQPSLRKSHGHWAAGTARGCFHQSLSTVQTCPRLVPQQPSPTELEPLGGQTLTVEATA 240
TSGQPSLRKSHGHWAAGTAR GQTLTVEATA
Sbjct: 181 TSGQPSLRKSHGHWAAGTAR------------------------------GQTLTVEATA 210
Query: 241 LDLGLPPVLSPPYDFVQPA 259
LDLGLPPVLSPPYDFVQPA
Sbjct: 211 LDLGLPPVLSPPYDFVQPA 229
>gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens]
Length = 1316
Score = 40.4 bits (93), Expect = 0.005
Identities = 55/206 (26%), Positives = 83/206 (40%), Gaps = 25/206 (12%)
Query: 2 GWPSFCQAAWDSGAVSSEQESRT--------NCPRAACTNEGSTPAKLILERRSCGRVAL 53
G P+ + AW++ AV+ E+ + P C T L + + G +A
Sbjct: 782 GTPATKEGAWEAMAVAPEEPPPSAGEDIVGDTAPPDLCDPGSLTGDASPLSQDAKGMIAE 841
Query: 54 VIRHLHPVQGPWTQAPAPMAILQRPGCGGPPLAQAVGLAARDHQK-ARAFSAPRPLSCAG 112
R + P +PAP A + P C P L G ARD Q +++ AP A
Sbjct: 842 GPRDSALAEAPEGLSPAPPARSEEP-CEQPLLVHPSGDHARDAQDPSQSLGAPE---AAE 897
Query: 113 WVPARLQDCC-RHHPCGCSFQKP-QAGDDGAHGEIPGSCSCTLAPRQSYWHCHGSRHTRS 170
PA + D HP G + P + +D A + PG P + R
Sbjct: 898 RPPAPVLDMAPAGHPEGDAEPSPGERVEDAAAPKAPG-------PSPAKEKIGSLRKVDR 950
Query: 171 GYIGPQRQRSTSGQP---SLRKSHGH 193
G+ +R+RS+SG+P S K+ GH
Sbjct: 951 GHYRSRRERSSSGEPARESRSKTEGH 976
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 37.7 bits (86), Expect = 0.035
Identities = 55/213 (25%), Positives = 70/213 (32%), Gaps = 41/213 (19%)
Query: 205 QSLSTVQTCPRLVPQQPSPTEL-EPLGGQTLTVEATALDLGLPPVL----SPPYDFVQPA 259
+ LS T PR Q P P E +P L E D + P L SPP + A
Sbjct: 149 RQLSVKDTVPRAPSQFPPPLETWKP--PPPLPSERQPADRRITPALATPASPPTE--SQA 204
Query: 260 GPQGSLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGMGAAAERERGPGLTDEMQYT 319
GP+ T R +RG P AG M A+ E G L ++ +
Sbjct: 205 GPRNQGQTAGR----------------ARGGAPPHAGEGEMAQPADSESGLSLLCKITFK 248
Query: 320 ERDWEPPP-------QEAEQGAHG--------PAFQLVPVSQSDSIPLGLTLVKGQLLER 364
R PP +A G G A V + +P G G+ + R
Sbjct: 249 SRPSLAPPAASSSLAAKASLGGGGGGGLFAASGAISYAEVLKQGPLPPGAARPLGE-VSR 307
Query: 365 LCSPMRGAALPGPGCKDPEERAALWPHAKPSPP 397
G G GC P A A P PP
Sbjct: 308 GAQEAEGGDGDGEGCSGPPSAPASQARALPPPP 340
>gi|155029552 hypothetical protein LOC388115 [Homo sapiens]
Length = 534
Score = 36.6 bits (83), Expect = 0.079
Identities = 53/188 (28%), Positives = 73/188 (38%), Gaps = 47/188 (25%)
Query: 243 LGLPPVLSPPYDFVQPAGPQG-SLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGMG 301
LG P SP P GP+G S+A+ A +PC + S G G G
Sbjct: 380 LGSAPAASPA--LASPEGPKGESVASTASSVPCSPQEPDLAPLDLSLG---------GAG 428
Query: 302 AAAERERGP--GLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSIPLGLTLVKG 359
RE G GL Q + W P+ ++Q PLG + +
Sbjct: 429 IPGPRESGCVLGLRPGAQESPVSW---PEGSKQQ-----------------PLGWSNHQA 468
Query: 360 QLLERLC-SPMRGAALPGPGCKDPEERA-------ALWPHAKPSPPPSQEARCHQG-QAV 410
+L + C P RGA LP PG E+R+ L P ++P+ SQ +R G +
Sbjct: 469 ELEVQTCPEPQRGAGLPEPG----EDRSGKSGAQQGLAPRSRPTRGGSQRSRGTAGVRRR 524
Query: 411 TGWHQPCG 418
TG P G
Sbjct: 525 TGRPGPAG 532
>gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 [Homo
sapiens]
Length = 1461
Score = 36.2 bits (82), Expect = 0.10
Identities = 47/174 (27%), Positives = 59/174 (33%), Gaps = 36/174 (20%)
Query: 294 TAGVAGMGAAAERERGPGLTDEM---------QYTERDWEPPPQEAEQGAHGPAFQLVPV 344
+ G+ G A +ER P + + E P P E HG FQ PV
Sbjct: 1156 SGGLTGFKTAPYKERAPQFQESVGSFRSNSFNSTFEHHLPPSPLE-----HGTPFQREPV 1210
Query: 345 SQSDSIPLGLTLVKGQLLERLCSPMRGAALPGPGCKDPEERAALWPHAKPSPPPSQEARC 404
S + P+ G + S LP +P + A HA P PPP +
Sbjct: 1211 GPSSAPPVPPKDHGG-----IFSRDAPTHLPSVDLSNPFTKEAALAHAAPPPPPGE---- 1261
Query: 405 HQGQAVTGWHQPCGEPVTCRLPVPTHSLGPSKAPRSR------PVQLGGLVPFP 452
H G P P P S G S P S PV G+VPFP
Sbjct: 1262 HSG-------IPFPTPPPPPPPGEHSSSGGSGVPFSTPPPPPPPVDHSGVVPFP 1308
>gi|14249534 hypothetical protein LOC84915 [Homo sapiens]
Length = 452
Score = 36.2 bits (82), Expect = 0.10
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 19/118 (16%)
Query: 325 PPPQEAEQGAHGPAFQLVPVSQSDSIP---LGLTLVKGQLLERLCSPMRGAALPGPGCKD 381
P P A+ G P+F + S + +P G L +G + GAA P G D
Sbjct: 226 PHPSPAKHGPV-PSFPSMAYSAAAGLPDCRKGTELGQGATQ---ALTLAGAAKPA-GYAD 280
Query: 382 PEERAALWPHAKPSPPPSQEARCHQGQAVT----------GWHQPCGEPVTCRLPVPT 429
LWP KP PPP Q R + G V + + G P+ C + +PT
Sbjct: 281 SGLDYLLWPQ-KPPPPPPQPLRAYSGSTVASKSPEACGGRAYERASGSPLNCGVGLPT 337
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 35.8 bits (81), Expect = 0.13
Identities = 103/401 (25%), Positives = 123/401 (30%), Gaps = 112/401 (27%)
Query: 60 PVQGPWTQAPA----PMAILQRPGCGGPPLAQAVGLAARDHQKARAFSAPR-----PLSC 110
P P + PA P+ I RPG GPP G +K A R P+
Sbjct: 1085 PAGSPGERGPAGAAGPIGIPGRPGPQGPP--GPAGEKGAPGEKGPQGPAGRDGLQGPVGL 1142
Query: 111 AGWVPARLQDCCRHHPCGCSFQKPQAGDDGAHGEIPGSCSCTLAPRQSYWHCHGSRHTRS 170
G P G + GD G GE PG GS+ +
Sbjct: 1143 PG-------------PAGPVGPPGEDGDKGEIGE-PGQ--------------KGSKGDKG 1174
Query: 171 --GYIGPQRQRSTSGQPSLRKSHGHWAAGTARGCFHQSLSTVQTCPRLVPQQPSPTELEP 228
G GP + GQP + G +G F Q PR P P P L+
Sbjct: 1175 EQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQK---GDEGPRGFPGPPGPVGLQG 1231
Query: 229 LGGQTLTVEATALDLGLPPVLSPPYDFVQPAGPQGSLATEAREMPCGHRGSTREDCVCSR 288
L G T D+G + PP P GP+G P G G+
Sbjct: 1232 LPGPPGEKGETG-DVGQ---MGPP----GPPGPRG---------PSGAPGAD-------- 1266
Query: 289 GALSPTAGVAGMGAAAERERGPGLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSD 348
G P G+ GA E+ PG E P E G GP
Sbjct: 1267 GPQGPPGGIGNPGAVGEKGE-PGEAGE----------PGLPGEGGPPGP----------- 1304
Query: 349 SIPLGLTLVKGQLLERLCSPMRGAALPGPGCKDPEERAALWPHAKPSP--------PPSQ 400
KG+ E+ S GAA P PG K P P P P PP +
Sbjct: 1305 ---------KGERGEKGESGPSGAAGP-PGPKGPPGDDG--PKGSPGPVGFPGDPGPPGE 1352
Query: 401 EARCHQGQAVTGWHQPCGEPVTCRLPVPTHSLGPSKAPRSR 441
Q G GEP P PT GPS P R
Sbjct: 1353 PGPAGQ-DGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKR 1392
>gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo
sapiens]
Length = 373
Score = 35.8 bits (81), Expect = 0.13
Identities = 76/307 (24%), Positives = 100/307 (32%), Gaps = 74/307 (24%)
Query: 257 QPAGPQ-GSLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGMGAAAERERGPGL--T 313
QP P G A P GHR T C+ RG T G G + E GP T
Sbjct: 17 QPGHPNTGGAAAHPTYHPMGHRPRT---CILLRG--DQTTG--GQAPSREISLGPWAAGT 69
Query: 314 DEMQYTERDWEPPPQEAEQGAHGPA-FQLVPVSQSDSIPLGLTLVKGQLLERLCSPMRGA 372
+ + W G PA +P S + PL + + Q
Sbjct: 70 HFLAISTTPW---------GRKTPACISELPTSSGTAQPLANAVCEVQ------------ 108
Query: 373 ALPGPGCKDPEERAALWPHAKPSPP--------PSQEARCHQGQAVTGWHQPCGEPVTCR 424
+PGPG + A P K +PP Q H + VTG P P R
Sbjct: 109 TVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSP-PPPAASR 167
Query: 425 LPVPTHSLGPSKAPRSRPVQLGGL-VPFPPKFLGLIMGRGAGKVSPLGLRARVKIAGTPV 483
+ P + PR + LG P + L L + +G GK G R R+ + V
Sbjct: 168 -----YGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGK----GTRQRIPLTDAAV 218
Query: 484 SWPWLALAHVVGVGLMVDGAEHQAGLGLRGGAPGMESLRGQVPLSTPLVMQDGAGCWQGP 543
+ + G H GL + G P TP+V G
Sbjct: 219 GGDRTDIPSAIAAGPARTPDRH--GLPIPGSTP------------TPMV---------GS 255
Query: 544 GRLDGPV 550
GRL PV
Sbjct: 256 GRLGAPV 262
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 35.8 bits (81), Expect = 0.13
Identities = 68/271 (25%), Positives = 89/271 (32%), Gaps = 50/271 (18%)
Query: 185 PSLRKS-HGHWAAGTARGCFHQSLSTVQTCPRLVPQQPSPTELEPLGGQTLTVEATA--- 240
PS ++S HW T+ + + P Q PSP P+G TL E A
Sbjct: 2091 PSPKESGRSHWDDSTSDSELEKG---AREQPEKEAQSPSPPHPIPMGSPTLWPETEAHVS 2147
Query: 241 --LDLGLPPVLSPPYDF---------VQPAGPQGSLATEAREMPCGHRGSTREDCVCSRG 289
LD L P P DF +QPA PQ E R PCG + + +
Sbjct: 2148 PPLDSHLGPA-RPSLDFPASAFGFSSLQPAPPQLPSPAEPRSAPCGSLAFSGDRAL---- 2202
Query: 290 ALSPTAGVAGMGAAAERERGPGLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDS 349
AL+P R R + + D P + P +P S +
Sbjct: 2203 ALAP--------GPPTRTRHDEYLEVTKAPSLDSSLPQLPSPSSPGAPLLSNLPRPASPA 2254
Query: 350 IPLG-----LTLVKGQLLERLCSPMRGAALPGPGCKDPEERAA---LW--PHAKPSPP-- 397
+ G T V + ER SP AA G DP A LW P+PP
Sbjct: 2255 LSEGSSSEATTPVISSVAERF-SPSLEAAEQESGELDPGMEPAAHSLWDLTPLSPAPPAS 2313
Query: 398 ------PSQEARCHQGQAVTGWHQPCGEPVT 422
P+ G + H C E T
Sbjct: 2314 LDLALAPAPSLPGDMGDGILPCHLECSEAAT 2344
>gi|61966733 hypothetical protein LOC388199 [Homo sapiens]
Length = 402
Score = 35.8 bits (81), Expect = 0.13
Identities = 76/307 (24%), Positives = 100/307 (32%), Gaps = 74/307 (24%)
Query: 257 QPAGPQ-GSLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGMGAAAERERGPGL--T 313
QP P G A P GHR T C+ RG T G G + E GP T
Sbjct: 17 QPGHPNTGGAAAHPTYHPMGHRPRT---CILLRG--DQTTG--GQAPSREISLGPWAAGT 69
Query: 314 DEMQYTERDWEPPPQEAEQGAHGPA-FQLVPVSQSDSIPLGLTLVKGQLLERLCSPMRGA 372
+ + W G PA +P S + PL + + Q
Sbjct: 70 HFLAISTTPW---------GRKTPACISELPTSSGTAQPLANAVCEVQ------------ 108
Query: 373 ALPGPGCKDPEERAALWPHAKPSPP--------PSQEARCHQGQAVTGWHQPCGEPVTCR 424
+PGPG + A P K +PP Q H + VTG P P R
Sbjct: 109 TVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSP-PPPAASR 167
Query: 425 LPVPTHSLGPSKAPRSRPVQLGGL-VPFPPKFLGLIMGRGAGKVSPLGLRARVKIAGTPV 483
+ P + PR + LG P + L L + +G GK G R R+ + V
Sbjct: 168 -----YGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGK----GTRQRIPLTDAAV 218
Query: 484 SWPWLALAHVVGVGLMVDGAEHQAGLGLRGGAPGMESLRGQVPLSTPLVMQDGAGCWQGP 543
+ + G H GL + G P TP+V G
Sbjct: 219 GGDRTDIPSAIAAGPARTPDRH--GLPIPGSTP------------TPMV---------GS 255
Query: 544 GRLDGPV 550
GRL PV
Sbjct: 256 GRLGAPV 262
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 35.0 bits (79), Expect = 0.23
Identities = 60/239 (25%), Positives = 92/239 (38%), Gaps = 53/239 (22%)
Query: 182 SGQPSLRKSHGHW-AAGTARGCFHQSLSTVQTCPRLVPQQPSPTELEPLGGQTLTVEATA 240
+GQ + +S H +A + G F S S++ C +L GG TL+ A+
Sbjct: 306 TGQGHVVESPSHCVSADSPDGFFLGSCSSLDPCL----WHQDTEDLMDSGGSTLSSAASG 361
Query: 241 LDLGLPPV--LSPPYDFV----QPAGPQGSLATEAREMPCGHRGSTREDCVCSRGALSPT 294
L PP LS PY + + AGP GS H+G C + L +
Sbjct: 362 L-APYPPAACLSTPYSSIPRGREKAGPMGS-----------HQGPGPPPCQKAPSGLVTS 409
Query: 295 AGVAGMGAAAERERGPGLTDEMQ----YTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSI 350
+ P L D+ Q W+PPP A PA P ++ ++
Sbjct: 410 C------------KAPFLVDQSQKLPAVPASSWKPPPGLAPP-QKAPAAS-APPRKAPAV 455
Query: 351 PLGLTLVKGQLLERLCSPMRGA-ALPGPGCK------DPEERAALWPHAKPSPPPSQEA 402
P Q + +P + A A+P P K P + +A+ + +PPPSQ+A
Sbjct: 456 P-----APSQKAPAVPAPSQKAPAIPAPSRKASAASASPRKASAVPAPPQKTPPPSQKA 509
>gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1
[Homo sapiens]
Length = 812
Score = 35.0 bits (79), Expect = 0.23
Identities = 36/140 (25%), Positives = 53/140 (37%), Gaps = 12/140 (8%)
Query: 325 PPPQEAEQGAHGPA---FQLVPVSQSDSIPLGLTLVKGQLLERLCSPMRGAALPGPGCKD 381
P P+ G P+ + L+P+ + IP G L+ + +P A+ P
Sbjct: 447 PYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQ 506
Query: 382 PEERAALWPHAKPSPPPSQEARCHQGQAVTGWHQPCGEPVTCRLPVPT---------HSL 432
R+A+ ++ PP Q + Q Q Q G VT R V T S
Sbjct: 507 QPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLSRQSS 566
Query: 433 GPSKAPRSRPVQLGGLVPFP 452
G + P S PV L+P P
Sbjct: 567 GETPEPPSGPVYPSSLMPQP 586
>gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo
sapiens]
Length = 1157
Score = 34.7 bits (78), Expect = 0.30
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 389 WPHAKPSPPPSQEARCHQGQAVTGWHQPCGEPVTCRLPVPTHSLGPSKAPRSRPVQLGGL 448
WP A+ +E+ + P EP + L P+ AP S+PV G
Sbjct: 156 WPSAEEEEEEEEESESELEEESELDEDPAAEPAEAGVGTTVAPLPPAPAPSSQPVPAGMT 215
Query: 449 VPFPP 453
VP PP
Sbjct: 216 VPPPP 220
>gi|148839382 ring finger protein 169 [Homo sapiens]
Length = 708
Score = 34.7 bits (78), Expect = 0.30
Identities = 49/157 (31%), Positives = 59/157 (37%), Gaps = 46/157 (29%)
Query: 246 PPVLSPPYD-FVQPAGPQGSLAT--EAREMPCGHRGSTREDCVCSRGALSPTAGVAGMGA 302
PP+L PP + +G G L EA +PCGH +C RG A AG G
Sbjct: 52 PPLLQPPLPPRPEESGCAGCLEPPGEAAALPCGHS-------LC-RGCAQRAADAAGPGC 103
Query: 303 AAERERGPGLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSIPLGLTLVKGQLL 362
R RGPG W A + A Q+DS LG + Q
Sbjct: 104 PRCRARGPG-----------W------ARRRARDD-------GQADSEVLGECARRSQ-- 137
Query: 363 ERLCSPMR--GAALPGPGCKDPEERAALWPHAKPSPP 397
C P R GAA GP PE+ P A P+ P
Sbjct: 138 PERCRPRRDGGAAAAGP---RPEQE----PRAAPAEP 167
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 34.7 bits (78), Expect = 0.30
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 343 PVSQSDSIPLGLTLVKGQLLERLCSPMRGAALPGPGCKDPEERAALWPHAKPSPPPSQEA 402
PVS +++ LG ++ ER P A PGP +D +A W + P PPP ++A
Sbjct: 754 PVSSTEASSLGQKDLEAAGAERSPCPEAAAPPPGPRTRDNFTKAPSWEASAP-PPPREDA 812
Query: 403 RCHQG 407
G
Sbjct: 813 GTQAG 817
>gi|222352129 von Willebrand factor A domain containing 5B2 [Homo
sapiens]
Length = 1242
Score = 34.3 bits (77), Expect = 0.39
Identities = 40/166 (24%), Positives = 54/166 (32%), Gaps = 34/166 (20%)
Query: 375 PGPGCKDPEERAALWPHAKPSPPPSQEARCHQGQAVTGWHQPCGEPVTCRLPVPTHSLGP 434
PGPG E P E QG W +P G +C LP PT
Sbjct: 676 PGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSR-SCPLPAPT----- 729
Query: 435 SKAPRSRPVQLGGLVPFPPKFLGLIMGRGAGKVSPLGLRARVKIAGTPVSWPWLALAHVV 494
P P K GA LG + R +AG +S P V
Sbjct: 730 ---------------PAPFKV-------GALSTEVLGRQHRAALAGRSLSSPPGRANQVP 767
Query: 495 G------VGLMVDGAEHQAGLGLRGGAPGMESLRGQVPLSTPLVMQ 534
G +G ++DG + G L G +L P+ ++M+
Sbjct: 768 GRPRKPSLGAILDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLME 813
>gi|148613882 homeobox A4 [Homo sapiens]
Length = 320
Score = 34.3 bits (77), Expect = 0.39
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 14/113 (12%)
Query: 393 KPSPPPSQEARCHQGQAVTGWHQP-CGEPVTCRLPVPTHSLGPSKAPRSRPVQLGGLVPF 451
+P PP+Q G + QP P+ R P AP + V GG P
Sbjct: 115 QPEQPPAQAKGPAHGLHASHVLQPQLPPPLQPRAVPPAAPRRCEAAPATPGVPAGGSAPA 174
Query: 452 PPKFLGLIMGRGAGKVSPLGLRARVKIAGTPVSWPWLALAHVVGVGLMVDGAE 504
P L SPLGL+ + PV +PW+ HV V +G E
Sbjct: 175 CPLLLA--------DKSPLGLKGK-----EPVVYPWMKKIHVSAVNPSYNGGE 214
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 34.3 bits (77), Expect = 0.39
Identities = 59/236 (25%), Positives = 77/236 (32%), Gaps = 47/236 (19%)
Query: 208 STVQTCPRLVPQQPSPTELEPLGGQTLTVEATALDLGLPPVLSPPYDFVQPAGPQGSLAT 267
ST P L+ + P P + P L + L P + +PP DF+ PA P LA
Sbjct: 168 STAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPP-DFIPPAPPLAFLAP 226
Query: 268 EAREMPC--------GHRGSTREDCVCSRGALSPTAGVAGMGAAAERER----------- 308
+P H TR G + VA G AE R
Sbjct: 227 PPPPVPAPAPPAPASPHTVGTR--LFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 309 ----GPGLTDEMQYTERDWEPPP----------QEA------EQGAHGPAFQLVPVSQSD 348
GP + + PPP QEA E+GA A +P+ S
Sbjct: 285 GSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSF 344
Query: 349 SIPLGLTLVKGQLLERLCSPMRGAALP-----GPGCKDPEERAALWPHAKPSPPPS 399
I + + E C A P G +ERA P A P PPP+
Sbjct: 345 HIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPA 400
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 34.3 bits (77), Expect = 0.39
Identities = 59/236 (25%), Positives = 77/236 (32%), Gaps = 47/236 (19%)
Query: 208 STVQTCPRLVPQQPSPTELEPLGGQTLTVEATALDLGLPPVLSPPYDFVQPAGPQGSLAT 267
ST P L+ + P P + P L + L P + +PP DF+ PA P LA
Sbjct: 168 STAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPP-DFIPPAPPLAFLAP 226
Query: 268 EAREMPC--------GHRGSTREDCVCSRGALSPTAGVAGMGAAAERER----------- 308
+P H TR G + VA G AE R
Sbjct: 227 PPPPVPAPAPPAPASPHTVGTR--LFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 309 ----GPGLTDEMQYTERDWEPPP----------QEA------EQGAHGPAFQLVPVSQSD 348
GP + + PPP QEA E+GA A +P+ S
Sbjct: 285 GSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSF 344
Query: 349 SIPLGLTLVKGQLLERLCSPMRGAALP-----GPGCKDPEERAALWPHAKPSPPPS 399
I + + E C A P G +ERA P A P PPP+
Sbjct: 345 HIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPA 400
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 34.3 bits (77), Expect = 0.39
Identities = 59/236 (25%), Positives = 77/236 (32%), Gaps = 47/236 (19%)
Query: 208 STVQTCPRLVPQQPSPTELEPLGGQTLTVEATALDLGLPPVLSPPYDFVQPAGPQGSLAT 267
ST P L+ + P P + P L + L P + +PP DF+ PA P LA
Sbjct: 168 STAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPP-DFIPPAPPLAFLAP 226
Query: 268 EAREMPC--------GHRGSTREDCVCSRGALSPTAGVAGMGAAAERER----------- 308
+P H TR G + VA G AE R
Sbjct: 227 PPPPVPAPAPPAPASPHTVGTR--LFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 309 ----GPGLTDEMQYTERDWEPPP----------QEA------EQGAHGPAFQLVPVSQSD 348
GP + + PPP QEA E+GA A +P+ S
Sbjct: 285 GSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSF 344
Query: 349 SIPLGLTLVKGQLLERLCSPMRGAALP-----GPGCKDPEERAALWPHAKPSPPPS 399
I + + E C A P G +ERA P A P PPP+
Sbjct: 345 HIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPA 400
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 34.3 bits (77), Expect = 0.39
Identities = 36/117 (30%), Positives = 41/117 (35%), Gaps = 21/117 (17%)
Query: 295 AGVAGMGAAAERERGPGLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSIPLGL 354
AG AG G AA E PG E PP A G GP P + +P G
Sbjct: 68 AGAAGAGPAAPAEGAPGAAPE--------PPPAGRARPGGGGPQRPGPPSPRRPLVPAGP 119
Query: 355 TLVKGQL------LERLCSPMRGAAL------PGP-GCKDPEERAALWPHAKPSPPP 398
+L C+P+ AA P P G P AAL A P P P
Sbjct: 120 APPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGP 176
>gi|95147559 ankyrin repeat domain 43 [Homo sapiens]
Length = 549
Score = 34.3 bits (77), Expect = 0.39
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 24/149 (16%)
Query: 215 RLVPQQPSPTELEPLGGQTLTVEATALDLGLPPVLSPPYDFVQPAGPQGSLATEAREMPC 274
R + ++PSP PL + L+VE + L LGL P SP + AGP+ L+ +A E+P
Sbjct: 241 RQLSEEPSPRS-SPLLLRRLSVEESGLGLGLGPGRSPHLRRLSRAGPR-LLSPDAEELPA 298
Query: 275 GHRGSTREDCVCSRGALSPTAG-----------VAGMGAAAERERGPGLTDEMQYTERDW 323
S L TAG + G AA+R+ G +T W
Sbjct: 299 APPPSAVPLEPSEHEWLVRTAGGRWTHQLHGLLLRDRGLAAKRDFMSG------FTALHW 352
Query: 324 EPPPQEAEQGAHGPAFQLVPVSQSDSIPL 352
A+ G A QLV V++ P+
Sbjct: 353 -----AAKSGDGEMALQLVEVARRSGAPV 376
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 33.5 bits (75), Expect = 0.67
Identities = 59/233 (25%), Positives = 84/233 (36%), Gaps = 15/233 (6%)
Query: 252 PYDFVQPAG-PQGSLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGMGAAAERERGP 310
P+DF+ AG P+GS E + RG + + A + G + +G+ P
Sbjct: 174 PFDFLGRAGSPRGSPLAEGPQAFFPERGPSPRPPATAYDAPASAFGSSLLGSGGSAFAPP 233
Query: 311 -GLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSIPLGLTLVKGQLLERLCSPM 369
D++ R PP+ + A++ P SQ+ S + P
Sbjct: 234 LRAQDDLTLRRR----PPKAWNESDLDVAYEKKP-SQTASYERLDVFARPASPSLQLLPW 288
Query: 370 RGAALPGPGC--KDPEERAALWPHAKPSPPPSQEA------RCHQGQAVTGWHQPCGEPV 421
R ++L G G KD A L + K SP S R G A P
Sbjct: 289 RESSLDGLGGTGKDNLTSATLPRNYKVSPLASDRRSDAGSYRRSLGSAGPSGTLPRSWQP 348
Query: 422 TCRLPVPTHSLGPSKAPRSRPVQLGGLVPFPPKFLGLIMGRGAGKVSPLGLRA 474
R+P+P S P APR RP+ L + F R SPL RA
Sbjct: 349 VSRIPMPPSSPQPRGAPRQRPIPLSMIFKLQNAFWEHGASRAMLPGSPLFTRA 401
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 33.5 bits (75), Expect = 0.67
Identities = 59/233 (25%), Positives = 84/233 (36%), Gaps = 15/233 (6%)
Query: 252 PYDFVQPAG-PQGSLATEAREMPCGHRGSTREDCVCSRGALSPTAGVAGMGAAAERERGP 310
P+DF+ AG P+GS E + RG + + A + G + +G+ P
Sbjct: 174 PFDFLGRAGSPRGSPLAEGPQAFFPERGPSPRPPATAYDAPASAFGSSLLGSGGSAFAPP 233
Query: 311 -GLTDEMQYTERDWEPPPQEAEQGAHGPAFQLVPVSQSDSIPLGLTLVKGQLLERLCSPM 369
D++ R PP+ + A++ P SQ+ S + P
Sbjct: 234 LRAQDDLTLRRR----PPKAWNESDLDVAYEKKP-SQTASYERLDVFARPASPSLQLLPW 288
Query: 370 RGAALPGPGC--KDPEERAALWPHAKPSPPPSQEA------RCHQGQAVTGWHQPCGEPV 421
R ++L G G KD A L + K SP S R G A P
Sbjct: 289 RESSLDGLGGTGKDNLTSATLPRNYKVSPLASDRRSDAGSYRRSLGSAGPSGTLPRSWQP 348
Query: 422 TCRLPVPTHSLGPSKAPRSRPVQLGGLVPFPPKFLGLIMGRGAGKVSPLGLRA 474
R+P+P S P APR RP+ L + F R SPL RA
Sbjct: 349 VSRIPMPPSSPQPRGAPRQRPIPLSMIFKLQNAFWEHGASRAMLPGSPLFTRA 401
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 33.5 bits (75), Expect = 0.67
Identities = 55/228 (24%), Positives = 77/228 (33%), Gaps = 41/228 (17%)
Query: 249 LSPPYDFVQPAGPQGSLATEAREMPCGHRGSTREDCVCSRGAL-----SPTAGVAGMGAA 303
L P PA P+GS + PC RG+ +C R P A G G
Sbjct: 4 LCPAPRLAVPASPRGSPCSPTPRKPC--RGTQEFSPLCLRALAFCALAKPRASSLGPGPG 61
Query: 304 AERERGPGLTD-EMQYTERDWEPPPQE---AEQGAHGPAFQLVP-VSQSDSIPLGLTLVK 358
R P L + W P + A G G VP + + + +
Sbjct: 62 ELAARSPVLRGPQAPLRPGGWAPDGLKHLWAPTGRPG-----VPNTAAGEDADVAACPRR 116
Query: 359 GQLLE----------RLCSPMRGAALPG--PGCKDPEERAALWPHAKPSPPPSQEARCHQ 406
G+ E R C+P PG P P E + A P P P E + +
Sbjct: 117 GEEEEGGGGFPHFGVRSCAP------PGRCPAPPHPRESTTSFASAPPRPAPGLEPQ--R 168
Query: 407 GQAVTGWHQPCGEPVTCRLPVPTHSLGPSKAPR----SRPVQLGGLVP 450
G A + +P P + + T GP APR +P ++ G P
Sbjct: 169 GPAASPPQEPSSRPPSPPAGLSTEPAGPGTAPRPFLPGQPAEVDGNPP 216
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 33.5 bits (75), Expect = 0.67
Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 320 ERDWEPPPQEA--EQGAHGPAFQLVPVSQSDSIPLGLTLVKGQLLERLCSPMRGAALPGP 377
ER + PQ ++G A LVP + + + G + + +CS + A GP
Sbjct: 23 ERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGPSGILPAAEPTICSLHQ--AWGGP 80
Query: 378 GCKDPEE-RAALWPHAKPSPPPSQEARCHQGQAVTGWHQPCGEPVTCRLPVPTHSLGPSK 436
GC+ + AAL P P P P G P P P+P GP
Sbjct: 81 GCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPIS 140
Query: 437 APRSRPVQLGGLVPFP 452
P P G +P P
Sbjct: 141 GPVQIPGPFRGPIPGP 156
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 33.1 bits (74), Expect = 0.87
Identities = 58/196 (29%), Positives = 76/196 (38%), Gaps = 28/196 (14%)
Query: 430 HSLGPSKAPRSRPVQLGGLVPFPPKFLGLIMGRGAG------KVSPLGLRARVKIAGTPV 483
H P P + P + G V +P LG + G G K P GL AG
Sbjct: 22 HPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLG- 80
Query: 484 SWPWLALAHVVGVGLMVDGAEH----QAGLGLRGGAPGMESLRGQVPLSTP--LVMQDGA 537
++P + + G + D A +AG GL GG PG+ L S P +V Q GA
Sbjct: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGL-GGVPGVGGLGVSAAPSVPGAVVPQPGA 139
Query: 538 GCWQGPGRLDGPVPIEVVFPTNILHSC---AEETASEVPAGSSLVDEDAGGTHGNYEDLA 594
G PG++ G V + V+P +L VP G+ V A G G
Sbjct: 140 GV--KPGKVPG-VGLPGVYPGGVLPGARFPGVGVLPGVPTGAG-VKPKAPGVGG------ 189
Query: 595 RAGTGKEGTGKEGGRQ 610
A G G G GG Q
Sbjct: 190 -AFAGIPGVGPFGGPQ 204
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 33.1 bits (74), Expect = 0.87
Identities = 58/196 (29%), Positives = 76/196 (38%), Gaps = 28/196 (14%)
Query: 430 HSLGPSKAPRSRPVQLGGLVPFPPKFLGLIMGRGAG------KVSPLGLRARVKIAGTPV 483
H P P + P + G V +P LG + G G K P GL AG
Sbjct: 22 HPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLG- 80
Query: 484 SWPWLALAHVVGVGLMVDGAEH----QAGLGLRGGAPGMESLRGQVPLSTP--LVMQDGA 537
++P + + G + D A +AG GL GG PG+ L S P +V Q GA
Sbjct: 81 AFPAVTFPGALVPGGVADAAAAYKAAKAGAGL-GGVPGVGGLGVSAAPSVPGAVVPQPGA 139
Query: 538 GCWQGPGRLDGPVPIEVVFPTNILHSC---AEETASEVPAGSSLVDEDAGGTHGNYEDLA 594
G PG++ G V + V+P +L VP G+ V A G G
Sbjct: 140 GV--KPGKVPG-VGLPGVYPGGVLPGARFPGVGVLPGVPTGAG-VKPKAPGVGG------ 189
Query: 595 RAGTGKEGTGKEGGRQ 610
A G G G GG Q
Sbjct: 190 -AFAGIPGVGPFGGPQ 204
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,640,793
Number of Sequences: 37866
Number of extensions: 2080042
Number of successful extensions: 7304
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 7099
Number of HSP's gapped (non-prelim): 411
length of query: 684
length of database: 18,247,518
effective HSP length: 109
effective length of query: 575
effective length of database: 14,120,124
effective search space: 8119071300
effective search space used: 8119071300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.