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Search of human proteins with 239750460
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750460 PREDICTED: hypothetical protein [Homo sapiens]
(199 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750460 PREDICTED: hypothetical protein [Homo sapiens] 414 e-116
gi|239755941 PREDICTED: hypothetical protein [Homo sapiens] 204 5e-53
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 44 7e-05
gi|91208420 bassoon protein [Homo sapiens] 40 0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 37 0.008
gi|116284392 mucin 2 precursor [Homo sapiens] 35 0.032
gi|55750053 atrophin-1 [Homo sapiens] 35 0.042
gi|55750041 atrophin-1 [Homo sapiens] 35 0.042
gi|178557736 microtubule-associated protein tau isoform 5 [Homo ... 35 0.055
gi|188536004 zinc finger protein 469 [Homo sapiens] 35 0.055
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 34 0.072
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 34 0.094
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 34 0.094
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 34 0.094
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 34 0.094
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 33 0.12
gi|6754638 microtubule-associated protein tau isoform 2 [Homo sa... 33 0.16
gi|8400715 microtubule-associated protein tau isoform 4 [Homo sa... 33 0.16
gi|8400711 microtubule-associated protein tau isoform 3 [Homo sa... 33 0.16
gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens] 33 0.16
gi|190343021 Sec24-related protein D [Homo sapiens] 33 0.16
gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens] 33 0.21
gi|237820622 pleckstrin homology domain containing, family N mem... 32 0.27
gi|50428935 BPY2 interacting protein 1 [Homo sapiens] 32 0.27
gi|20544145 casein kinase 1, delta isoform 2 [Homo sapiens] 32 0.27
gi|20149530 casein kinase 1, delta isoform 1 [Homo sapiens] 32 0.27
gi|38202209 methyl-CpG binding domain protein 5 [Homo sapiens] 32 0.27
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 32 0.36
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 32 0.36
gi|27262645 ataxin 2 related protein isoform B [Homo sapiens] 32 0.36
>gi|239750460 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 414 bits (1065), Expect = e-116
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MDKNVALFVSHFLARSFPTFLNQRLPKTKASHSKPSTHIKRASLCEDQVSGPQTLTKQKH 60
MDKNVALFVSHFLARSFPTFLNQRLPKTKASHSKPSTHIKRASLCEDQVSGPQTLTKQKH
Sbjct: 1 MDKNVALFVSHFLARSFPTFLNQRLPKTKASHSKPSTHIKRASLCEDQVSGPQTLTKQKH 60
Query: 61 KAGVGRGGAGCQGQERNNQKGLGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPP 120
KAGVGRGGAGCQGQERNNQKGLGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPP
Sbjct: 61 KAGVGRGGAGCQGQERNNQKGLGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPP 120
Query: 121 KTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPEPSARPRLESEPKACELGHPT 180
KTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPEPSARPRLESEPKACELGHPT
Sbjct: 121 KTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPEPSARPRLESEPKACELGHPT 180
Query: 181 SVFTLIRKPDTPGLPLNEY 199
SVFTLIRKPDTPGLPLNEY
Sbjct: 181 SVFTLIRKPDTPGLPLNEY 199
>gi|239755941 PREDICTED: hypothetical protein [Homo sapiens]
Length = 101
Score = 204 bits (518), Expect = 5e-53
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 105 EDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPEPSAR 164
EDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPEPSAR
Sbjct: 7 EDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPEPSAR 66
Query: 165 PRLESEPKACELGHPTSVFTLIRKPDTPGLPLNEY 199
PRLESEPKACELGHPTSVFTLIRKPDTPGLPLNEY
Sbjct: 67 PRLESEPKACELGHPTSVFTLIRKPDTPGLPLNEY 101
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 44.3 bits (103), Expect = 7e-05
Identities = 47/148 (31%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 50 SGPQTLTKQKHKAGVGRGGAGCQGQERNNQKGLGTSKSPQRLN--RPQTTS--GKPPVKE 105
+GP T T + V R QG + G GT P RP T+S G PP E
Sbjct: 471 TGPWTSTTSE----VPRPPEPSQGPSTTSSGG-GTGPHPPSGTTLRPPTSSTPGGPPGAE 525
Query: 106 DDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPEPSARP 165
+ T+ Q + P D+A P+PGTS + GT T+ TA PEP
Sbjct: 526 NS-----TSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGT-- 578
Query: 166 RLESEPKACELGHPTSVFTLIRKPDTPG 193
S+P +G TS +P TPG
Sbjct: 579 ---SQPMPPSMGTSTS-----HQPATPG 598
Score = 39.3 bits (90), Expect = 0.002
Identities = 33/105 (31%), Positives = 40/105 (38%), Gaps = 9/105 (8%)
Query: 81 GLGTSKSPQRLNRPQTTSGKP-PVKEDDFPPILTTPQSSPPKTDSAGY---PRPGTSCWI 136
G+GTS S Q T+ P P PP + T S P T G P GTS +
Sbjct: 554 GVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPM 613
Query: 137 QENSGTQTARSKHFIGSETASNPEPSARPRLESEPKACELGHPTS 181
GT T+ G TA PEP S+P P+S
Sbjct: 614 PPGMGTSTSHQPTTPGGGTAQTPEPGT-----SQPMPLSKSTPSS 653
Score = 38.5 bits (88), Expect = 0.004
Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 13/101 (12%)
Query: 96 TTSGKPPVKEDDFPPILTTPQSSPPKTDSAGY---PRPGTSCWIQENSGTQTARSKHFIG 152
T P PP + T S P T S G P PGTS + + GT T+ G
Sbjct: 539 TAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPG 598
Query: 153 SETASNPEPSARPRLESEPKACELGHPTSVFTLIRKPDTPG 193
TA PE S+P +G TS +P TPG
Sbjct: 599 GGTAQTPEAGT-----SQPMPPGMGTSTS-----HQPTTPG 629
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 40.4 bits (93), Expect = 0.001
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 28/181 (15%)
Query: 28 TKASHSKPSTHIKRAS-LCEDQVSGPQTL-----TKQKHKAGVGRGGAGCQGQERNNQKG 81
++ +HS P+ +A + Q+ G Q ++ + G A Q Q + Q+G
Sbjct: 3725 SRQAHSGPAALQSKAEPQAQPQLQGRQAAPGPQQSQSPSSRQIPSGAASRQPQTQQQQQG 3784
Query: 82 LGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSG 141
LG Q L + + P TT S+P + AG P+PG S +G
Sbjct: 3785 LGLQPPQQALTQARLQQQSQP----------TTRGSAPAASQPAGKPQPGPS----TATG 3830
Query: 142 TQTA---RSKHFIGSE-TASNPEPSARPRLESEPKACELGHPTSVFTLIRKPDTPGLPLN 197
Q A R++ GS+ TA P+ P+ + P P V R TPG P
Sbjct: 3831 PQPAGPPRAEQTNGSKGTAKAPQQGRAPQAQPAPGP----GPAGVKAGARPGGTPGAPAG 3886
Query: 198 E 198
+
Sbjct: 3887 Q 3887
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 37.4 bits (85), Expect = 0.008
Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 16/171 (9%)
Query: 14 ARSFPTFLNQRLPKTKA-SHSKPSTHIKRASLCEDQVSGPQTLTKQKHKAGVGRGGAGCQ 72
+ S P R+ ++ S S P + K +SG KQK + R +G
Sbjct: 743 SNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSG-- 800
Query: 73 GQERNNQKGLGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSP-PKTDSAGYPRPG 131
+ + S++P R R +++S PP ++ P + SSP PK S PR G
Sbjct: 801 -----SSQPKAKSRTPPR--RSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQG 853
Query: 132 TSCWIQENSGTQTARSKHFIGSETASNPEPSARPRLESEPKACELGHPTSV 182
+ Q N + T + + S S+P+P + R S +C P V
Sbjct: 854 SITSPQANEQSVTPQRR----SCFESSPDPELKSRTPSR-HSCSGSSPPRV 899
Score = 30.4 bits (67), Expect = 1.0
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 13/126 (10%)
Query: 46 EDQVSGPQTLTKQKHKAGVGRGGAGCQGQERNNQKGLGTSKSPQ-----RLNRPQTTSGK 100
E + P+ L ++ R G+ +G+ + + T SP+ R R + S
Sbjct: 1623 EPKAPAPRALPRRS------RSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSP 1676
Query: 101 PPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPE 160
P + PP + +SSP T A R S + T++ S + S+PE
Sbjct: 1677 EPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSA--SSSPETRSRTPPRHRRSPSVSSPE 1734
Query: 161 PSARPR 166
P+ + R
Sbjct: 1735 PAEKSR 1740
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 35.4 bits (80), Expect = 0.032
Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 4/106 (3%)
Query: 94 PQTTSGKPPVKEDDFPPILTT---PQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHF 150
P TT+ PP PPI TT P ++ P + P P T+ + S T T S
Sbjct: 1652 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTT-MTTPSPTTTPSSPIT 1710
Query: 151 IGSETASNPEPSARPRLESEPKACELGHPTSVFTLIRKPDTPGLPL 196
+ +S PS P + P P + P T PL
Sbjct: 1711 TTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPL 1756
Score = 33.9 bits (76), Expect = 0.094
Identities = 30/102 (29%), Positives = 35/102 (34%), Gaps = 14/102 (13%)
Query: 84 TSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQ 143
T P P TT+ PP PP TTP SPP T P T+
Sbjct: 1469 TPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTP--SPPTTTPITPPASTTTLPPTTTPSPP 1526
Query: 144 TARSKHFIGSETASNPEPSARPRLESEPKACELGHPTSVFTL 185
T T + P P+ P S P + PTS TL
Sbjct: 1527 TT---------TTTTPPPTTTP---SPPTTTPITPPTSTTTL 1556
Score = 32.7 bits (73), Expect = 0.21
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 13/92 (14%)
Query: 94 PQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGS 153
P TT+ PP PP TTP SPP T + P T+ T + +
Sbjct: 1557 PPTTTPSPPPTTTTTPPPTTTP--SPPTTTTPSPPTITTT--------TPPPTTTPSPPT 1606
Query: 154 ETASNPEPSARPRLESEPKACELGHPTSVFTL 185
T + P P+ P S P + PTS TL
Sbjct: 1607 TTTTTPPPTTTP---SPPTTTPITPPTSTTTL 1635
Score = 29.3 bits (64), Expect = 2.3
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 94 PQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGS 153
P TT+ PP PP TTP SPP T + P T+ + + + +
Sbjct: 1636 PPTTTPSPPPTTTTTPPPTTTP--SPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPT 1693
Query: 154 ETASNPEPSARP 165
T + P P+ P
Sbjct: 1694 TTMTTPSPTTTP 1705
Score = 28.1 bits (61), Expect = 5.1
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
Query: 94 PQTTSGKPPVKEDDFPPILTT----PQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKH 149
P TT+ PP PPI TT P ++P S P T+ + +
Sbjct: 1425 PTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTP 1484
Query: 150 FIGSETASNPEPSARPRLESEPKACELGHPTSVFTL 185
+ T + P P+ P S P + P S TL
Sbjct: 1485 SPPTTTTTTPPPTTTP---SPPTTTPITPPASTTTL 1517
Score = 27.7 bits (60), Expect = 6.7
Identities = 28/105 (26%), Positives = 35/105 (33%), Gaps = 6/105 (5%)
Query: 94 PQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGS 153
P TT PP PP TTP SPP T + P T + T +
Sbjct: 1402 PTTTPSPPPTSTTTLPP-TTTP--SPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPI 1458
Query: 154 ETASNPEPS---ARPRLESEPKACELGHPTSVFTLIRKPDTPGLP 195
T + P P+ + P P PT+ T TP P
Sbjct: 1459 STTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPP 1503
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 35.0 bits (79), Expect = 0.042
Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
Query: 81 GLGTSKSPQRLNRP----QTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWI 136
GLG P L P Q G PP E P + +P S PP + SA P P
Sbjct: 319 GLGAQPLPGHLPSPHAMGQGMGGLPPGPEKG-PTLAPSPHSLPPASSSA--PAPPMRFPY 375
Query: 137 QENSGTQTARSKHFIGSETASNPEPSARPRLESEPKACELGHPTSVFTLIRKPDTPGLP 195
+S + A S S ++++P P+++ L S P + SV K P LP
Sbjct: 376 SSSSSSSAAASSSSSSSSSSASPFPASQ-ALPSYPHSFPPPTSLSVSNQPPKYTQPSLP 433
Score = 28.5 bits (62), Expect = 3.9
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 14/115 (12%)
Query: 19 TFLNQRLPKTKASHSKPSTHIKRASLCEDQVSGPQTLTKQKHKAGVGRGGAGCQGQERNN 78
T Q LP+ ++ S + SL +D S P+ + + G + ++
Sbjct: 90 TKTEQELPRPQSPSDLDS--LDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDS 147
Query: 79 QKGLGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTS 133
GL S+ P R P PP+ FPP P S+P + +++ P P +
Sbjct: 148 SSGL--SQGPARPYHP------PPL----FPPSPQPPDSTPRQPEASFEPHPSVT 190
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 35.0 bits (79), Expect = 0.042
Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
Query: 81 GLGTSKSPQRLNRP----QTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWI 136
GLG P L P Q G PP E P + +P S PP + SA P P
Sbjct: 319 GLGAQPLPGHLPSPHAMGQGMGGLPPGPEKG-PTLAPSPHSLPPASSSA--PAPPMRFPY 375
Query: 137 QENSGTQTARSKHFIGSETASNPEPSARPRLESEPKACELGHPTSVFTLIRKPDTPGLP 195
+S + A S S ++++P P+++ L S P + SV K P LP
Sbjct: 376 SSSSSSSAAASSSSSSSSSSASPFPASQ-ALPSYPHSFPPPTSLSVSNQPPKYTQPSLP 433
Score = 28.5 bits (62), Expect = 3.9
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 14/115 (12%)
Query: 19 TFLNQRLPKTKASHSKPSTHIKRASLCEDQVSGPQTLTKQKHKAGVGRGGAGCQGQERNN 78
T Q LP+ ++ S + SL +D S P+ + + G + ++
Sbjct: 90 TKTEQELPRPQSPSDLDS--LDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDS 147
Query: 79 QKGLGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTS 133
GL S+ P R P PP+ FPP P S+P + +++ P P +
Sbjct: 148 SSGL--SQGPARPYHP------PPL----FPPSPQPPDSTPRQPEASFEPHPSVT 190
>gi|178557736 microtubule-associated protein tau isoform 5 [Homo
sapiens]
Length = 412
Score = 34.7 bits (78), Expect = 0.055
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 32/156 (20%)
Query: 27 KTKASHSKPSTHIKRASL-----CEDQVSGPQTLTKQ--KHKAGVGRGGAGCQGQERNNQ 79
+T + S P+ + A + ED+ +G T + K K G G +G + +
Sbjct: 62 ETSDAKSTPTAEAEEAGIGDTPSLEDEAAGHVTQARMVSKSKDGTGSDDKKAKGADGKTK 121
Query: 80 KGLGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSS--PPKT-DSAGYPRPGTSCWI 136
+P + Q + + P K PP TP SS PPK+ D +GY PG
Sbjct: 122 IATPRGAAPPG-QKGQANATRIPAKT---PPAPKTPPSSGEPPKSGDRSGYSSPG----- 172
Query: 137 QENSGTQTARSKHFIGSETASNPEPSARPRLESEPK 172
+ GT +RS+ T S P P R EPK
Sbjct: 173 --SPGTPGSRSR------TPSLPTPPTR-----EPK 195
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 34.7 bits (78), Expect = 0.055
Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 22/125 (17%)
Query: 69 AGCQGQERNNQKGLGTSKSPQRLNRPQTTSGKPPV------KEDDFPPILTTPQSSP-PK 121
AGCQ ++ SK+ + P+ G E+ P TP++ P P
Sbjct: 3646 AGCQSSSKDRSAASTPSKALKFPVHPRKAVGSLAPGELARGTENGMKP--ATPKAKPGPS 3703
Query: 122 TDSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPE----PSARPRLESEP-----K 172
+ +G PRPGT + G+Q + + SETA+ P PS P E P K
Sbjct: 3704 SQGSGSPRPGT----KTGGGSQPQPASGQLQSETATTPAKPSFPSRSPAPERLPARAQAK 3759
Query: 173 ACELG 177
+C G
Sbjct: 3760 SCTKG 3764
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 34.3 bits (77), Expect = 0.072
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 93 RPQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIG 152
+PQT +P + D F +T + S P G PRPG S + + T R + G
Sbjct: 2177 QPQTP--RPSTQTDLFVTPVTNQRHSDPYAHPPGTPRPGIS--VPYSQPPATPRPRISEG 2232
Query: 153 SETASNPEPSARPRLESEPKACELGHPTSVFTLIRKPDT 191
+S P P + +A + P L+R PDT
Sbjct: 2233 FTRSSMTRPVLMPNQDPFLQAAQNRGPALPGPLVRPPDT 2271
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 33.9 bits (76), Expect = 0.094
Identities = 34/112 (30%), Positives = 41/112 (36%), Gaps = 20/112 (17%)
Query: 84 TSKSPQRLNRPQT--TSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSG 141
TS P +T T+ K P P TTP++ PP T P
Sbjct: 680 TSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP------------- 726
Query: 142 TQTARSKHFIGSETASNPEPSARP---RLESEPKACELGHPTSVFTLIRKPD 190
T T S S PE SA P LE+ PK E G PT+ KP+
Sbjct: 727 TTTKEPTTIHKSPDESTPELSAEPTPKALENSPK--EPGVPTTKTPAATKPE 776
Score = 27.3 bits (59), Expect = 8.8
Identities = 27/112 (24%), Positives = 35/112 (31%), Gaps = 5/112 (4%)
Query: 84 TSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQ 143
T+K P P TT P ++ P P + PK + P+ T +E + T
Sbjct: 282 TTKEPA----PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT- 336
Query: 144 TARSKHFIGSETASNPEPSARPRLESEPKACELGHPTSVFTLIRKPDTPGLP 195
T E A P EP P T P TP P
Sbjct: 337 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 388
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 33.9 bits (76), Expect = 0.094
Identities = 34/112 (30%), Positives = 41/112 (36%), Gaps = 20/112 (17%)
Query: 84 TSKSPQRLNRPQT--TSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSG 141
TS P +T T+ K P P TTP++ PP T P
Sbjct: 721 TSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP------------- 767
Query: 142 TQTARSKHFIGSETASNPEPSARP---RLESEPKACELGHPTSVFTLIRKPD 190
T T S S PE SA P LE+ PK E G PT+ KP+
Sbjct: 768 TTTKEPTTIHKSPDESTPELSAEPTPKALENSPK--EPGVPTTKTPAATKPE 817
Score = 27.3 bits (59), Expect = 8.8
Identities = 27/112 (24%), Positives = 35/112 (31%), Gaps = 5/112 (4%)
Query: 84 TSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQ 143
T+K P P TT P ++ P P + PK + P+ T +E + T
Sbjct: 323 TTKEPA----PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT- 377
Query: 144 TARSKHFIGSETASNPEPSARPRLESEPKACELGHPTSVFTLIRKPDTPGLP 195
T E A P EP P T P TP P
Sbjct: 378 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 429
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 33.9 bits (76), Expect = 0.094
Identities = 34/112 (30%), Positives = 41/112 (36%), Gaps = 20/112 (17%)
Query: 84 TSKSPQRLNRPQT--TSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSG 141
TS P +T T+ K P P TTP++ PP T P
Sbjct: 773 TSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP------------- 819
Query: 142 TQTARSKHFIGSETASNPEPSARP---RLESEPKACELGHPTSVFTLIRKPD 190
T T S S PE SA P LE+ PK E G PT+ KP+
Sbjct: 820 TTTKEPTTIHKSPDESTPELSAEPTPKALENSPK--EPGVPTTKTPAATKPE 869
Score = 27.3 bits (59), Expect = 8.8
Identities = 27/112 (24%), Positives = 35/112 (31%), Gaps = 5/112 (4%)
Query: 84 TSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQ 143
T+K P P TT P ++ P P + PK + P+ T +E + T
Sbjct: 375 TTKEPA----PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT- 429
Query: 144 TARSKHFIGSETASNPEPSARPRLESEPKACELGHPTSVFTLIRKPDTPGLP 195
T E A P EP P T P TP P
Sbjct: 430 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 481
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 33.9 bits (76), Expect = 0.094
Identities = 34/112 (30%), Positives = 41/112 (36%), Gaps = 20/112 (17%)
Query: 84 TSKSPQRLNRPQT--TSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSG 141
TS P +T T+ K P P TTP++ PP T P
Sbjct: 814 TSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP------------- 860
Query: 142 TQTARSKHFIGSETASNPEPSARP---RLESEPKACELGHPTSVFTLIRKPD 190
T T S S PE SA P LE+ PK E G PT+ KP+
Sbjct: 861 TTTKEPTTIHKSPDESTPELSAEPTPKALENSPK--EPGVPTTKTPAATKPE 910
Score = 27.3 bits (59), Expect = 8.8
Identities = 27/112 (24%), Positives = 35/112 (31%), Gaps = 5/112 (4%)
Query: 84 TSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQ 143
T+K P P TT P ++ P P + PK + P+ T +E + T
Sbjct: 416 TTKEPA----PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT- 470
Query: 144 TARSKHFIGSETASNPEPSARPRLESEPKACELGHPTSVFTLIRKPDTPGLP 195
T E A P EP P T P TP P
Sbjct: 471 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 522
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 33.5 bits (75), Expect = 0.12
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 95 QTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSE 154
+ G PP PP L P+S PPK P PG ++E GT+ R G++
Sbjct: 971 EVEEGAPP--PPTLPPALPPPES-PPKVQPEPEPEPGLLLEVEE-PGTEEER-----GAD 1021
Query: 155 TASNPEPSARP---RLESEPKACELGHPTSVFTLIRKPDTPGLPLNE 198
TA P A P +E E ++ G P + +P P L E
Sbjct: 1022 TAPTLAPEALPSQGEVEREGESPAAGPPPQEL-VEEEPSAPPTLLEE 1067
>gi|6754638 microtubule-associated protein tau isoform 2 [Homo
sapiens]
Length = 441
Score = 33.1 bits (74), Expect = 0.16
Identities = 39/132 (29%), Positives = 54/132 (40%), Gaps = 27/132 (20%)
Query: 46 EDQVSGPQTLTKQ--KHKAGVGRGGAGCQGQERNNQKGLGTSKSPQRLNRPQTTSGKPPV 103
ED+ +G T + K K G G +G + + +P + Q + + P
Sbjct: 115 EDEAAGHVTQARMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPG-QKGQANATRIPA 173
Query: 104 KEDDFPPILTTPQSS--PPKT-DSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPE 160
K PP TP SS PPK+ D +GY PG + GT +RS+ T S P
Sbjct: 174 KT---PPAPKTPPSSGEPPKSGDRSGYSSPG-------SPGTPGSRSR------TPSLPT 217
Query: 161 PSARPRLESEPK 172
P R EPK
Sbjct: 218 PPTR-----EPK 224
>gi|8400715 microtubule-associated protein tau isoform 4 [Homo
sapiens]
Length = 352
Score = 33.1 bits (74), Expect = 0.16
Identities = 39/132 (29%), Positives = 54/132 (40%), Gaps = 27/132 (20%)
Query: 46 EDQVSGPQTLTKQ--KHKAGVGRGGAGCQGQERNNQKGLGTSKSPQRLNRPQTTSGKPPV 103
ED+ +G T + K K G G +G + + +P + Q + + P
Sbjct: 57 EDEAAGHVTQARMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPG-QKGQANATRIPA 115
Query: 104 KEDDFPPILTTPQSS--PPKT-DSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPE 160
K PP TP SS PPK+ D +GY PG + GT +RS+ T S P
Sbjct: 116 KT---PPAPKTPPSSGEPPKSGDRSGYSSPG-------SPGTPGSRSR------TPSLPT 159
Query: 161 PSARPRLESEPK 172
P R EPK
Sbjct: 160 PPTR-----EPK 166
>gi|8400711 microtubule-associated protein tau isoform 3 [Homo
sapiens]
Length = 383
Score = 33.1 bits (74), Expect = 0.16
Identities = 39/132 (29%), Positives = 54/132 (40%), Gaps = 27/132 (20%)
Query: 46 EDQVSGPQTLTKQ--KHKAGVGRGGAGCQGQERNNQKGLGTSKSPQRLNRPQTTSGKPPV 103
ED+ +G T + K K G G +G + + +P + Q + + P
Sbjct: 57 EDEAAGHVTQARMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPG-QKGQANATRIPA 115
Query: 104 KEDDFPPILTTPQSS--PPKT-DSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPE 160
K PP TP SS PPK+ D +GY PG + GT +RS+ T S P
Sbjct: 116 KT---PPAPKTPPSSGEPPKSGDRSGYSSPG-------SPGTPGSRSR------TPSLPT 159
Query: 161 PSARPRLESEPK 172
P R EPK
Sbjct: 160 PPTR-----EPK 166
>gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens]
Length = 1992
Score = 33.1 bits (74), Expect = 0.16
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 41 RASLCEDQVSGPQTLTKQKHKAGVGRGGAGCQGQERN-----NQKGLGTSKSPQRLNRPQ 95
RA+ E Q +G + K+ + GV R + + + K L ++SP N+P
Sbjct: 51 RANTSERQKTGQ--VPKKDNSRGVKRSASPDYNRTNSPSSAKKPKALQHTESPSETNKPH 108
Query: 96 TTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSET 155
+ S K + ++ +P +S T +G S Q+ T+++ K GSE+
Sbjct: 109 SKSKKRHLDQEQQLKSAQSPSTSKAHTRKSGATGGSRS---QKRKRTESSCVKSGSGSES 165
Query: 156 ASNPEPSARP 165
E SA+P
Sbjct: 166 TGAEERSAKP 175
>gi|190343021 Sec24-related protein D [Homo sapiens]
Length = 1032
Score = 33.1 bits (74), Expect = 0.16
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 19/103 (18%)
Query: 81 GLGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENS 140
G G S P + RP SG PP PP L P +T AGYP Q NS
Sbjct: 180 GPGASPLPLPMYRPDGLSGPPPPNAQYQPPPL------PGQTLGAGYPPQ------QANS 227
Query: 141 GTQTARSK-----HFIG--SETASNPEPSARPRLESEPKACEL 176
G Q A ++ F G ++ A P+P + +S P ++
Sbjct: 228 GPQMAGAQLSYPGGFPGGPAQMAGPPQPQKKLDPDSIPSPIQV 270
>gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]
Length = 1486
Score = 32.7 bits (73), Expect = 0.21
Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 14/106 (13%)
Query: 95 QTTSGKPPVKEDDFPPILTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSE 154
+TTS P TT +S+P + S Y TS TA + HF SE
Sbjct: 580 ETTSHSTPGFTSSITTTETTSESTPSLSSSTIYSTVSTST---------TAITSHFTTSE 630
Query: 155 TASNPEPSARPRLESEPKACELG--HPTSVFT---LIRKPDTPGLP 195
TA P P L ++ L P+SV T L D P +P
Sbjct: 631 TAVTPTPVTPSSLSTDIPTTSLRTLTPSSVGTSTSLTTTTDFPSIP 676
>gi|237820622 pleckstrin homology domain containing, family N member
1 isoform a [Homo sapiens]
Length = 611
Score = 32.3 bits (72), Expect = 0.27
Identities = 42/177 (23%), Positives = 65/177 (36%), Gaps = 26/177 (14%)
Query: 26 PKTKASHSKPSTHIKRASLCEDQVSGPQTLTKQKHKAGVGRGGAGCQGQERNNQKGLGTS 85
P T+ SHS P + + C Q + Q +A +GR R + G+S
Sbjct: 359 PSTRTSHSLPESSVPSTVGCSSQHTPDQA---NSDRASIGR--------RRTELRRSGSS 407
Query: 86 KSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPPKTD-------SAGYPRPGTSCWIQE 138
+SP R + P+ D + +SSP D S Y P T
Sbjct: 408 RSPGSKARAEGRGPVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSH 467
Query: 139 NSGTQTARSKHFIGS------ETASNPEPSARPRL-ESEPKACELGHPTSVFTLIRK 188
T + F+ + T S+P PS + S+P++C G P + L +K
Sbjct: 468 RRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSG-PAGPYLLSKK 523
>gi|50428935 BPY2 interacting protein 1 [Homo sapiens]
Length = 1059
Score = 32.3 bits (72), Expect = 0.27
Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 52 PQTLTKQKHKAGVGRGGAGCQGQERNNQKGLGTSKSPQRLNRPQTTSGKPPVKEDDFPPI 111
P K K AG R + ++KG G + ++ + P+T + P P +
Sbjct: 880 PVAAAKTKGLAGGDRASRPLSARSEPSEKG-GRAPLSRKSSTPKTATRGPSGSASSRPGV 938
Query: 112 LTTPQSSPPKTDSAGYPRPGTSCWIQENSGTQTARSKHFIGSETASNPEPSARPRLES 169
TP SP D A P G+S + + Q R+ ++ S E R L++
Sbjct: 939 SATPPKSPVYLDLAYLP-SGSSAHLVDEEFFQRVRALCYVISGQDQRKEEGMRAVLDA 995
>gi|20544145 casein kinase 1, delta isoform 2 [Homo sapiens]
Length = 409
Score = 32.3 bits (72), Expect = 0.27
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 61 KAGVGRGGAGCQGQERNNQKGLGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPP 120
K G R + + R+ ++ L S++P P T SG+ ++ PP TP S
Sbjct: 294 KFGASRAADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTA 353
Query: 121 KTDSAGYPRP 130
T PRP
Sbjct: 354 NTS----PRP 359
>gi|20149530 casein kinase 1, delta isoform 1 [Homo sapiens]
Length = 415
Score = 32.3 bits (72), Expect = 0.27
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 61 KAGVGRGGAGCQGQERNNQKGLGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPP 120
K G R + + R+ ++ L S++P P T SG+ ++ PP TP S
Sbjct: 294 KFGASRAADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTA 353
Query: 121 KTDSAGYPRP 130
T PRP
Sbjct: 354 NTS----PRP 359
>gi|38202209 methyl-CpG binding domain protein 5 [Homo sapiens]
Length = 1494
Score = 32.3 bits (72), Expect = 0.27
Identities = 30/114 (26%), Positives = 36/114 (31%), Gaps = 22/114 (19%)
Query: 22 NQRLPKTKASHSKPSTHIKRASLCEDQVSGPQTLTKQKHKAGVGRGGAGCQGQERNNQKG 81
N LP K H +H++R P +T H G G G
Sbjct: 406 NLPLPTVKPGHMNHGSHVQRVQHSASTSLSPSPVTSPVHMMGTGIG-------------- 451
Query: 82 LGTSKSPQRLNRPQTTSG-----KPPVKEDDFPPILTTPQSSPPKTDSAGYPRP 130
SPQR T+S PPV + P SP T G PRP
Sbjct: 452 -RIEASPQRSRSSSTSSDHGNFMMPPVGPQATSSGIKVPPRSPRST--IGSPRP 502
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 32.0 bits (71), Expect = 0.36
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 55 LTKQKHKAGVGRGGAGCQGQERNNQK--GLGTSKSPQRLNRPQTTSGKPPVKEDDFPPIL 112
+ K+ H+ G GG G QG+ R++ + G T +P R RP + +P P
Sbjct: 2 IRKRPHQQG--GGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPA 59
Query: 113 TTPQSSPPKTDSAGYP-RPGTSCWIQENSGTQTARSKHFIGSETASNPEPSARPRLESEP 171
SPP +A +P RP ++ + R + + T +PS RP L P
Sbjct: 60 AGAVPSPP---AAAHPARPA----LRGETPAPGRRGR----ATTRGEVQPSVRPPLSHRP 108
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 32.0 bits (71), Expect = 0.36
Identities = 29/114 (25%), Positives = 41/114 (35%), Gaps = 5/114 (4%)
Query: 83 GTSKSPQRLNRPQTTSGKPPVKEDDF-PPILTTPQSSPPKTDSAGYPRPGTSCWIQENSG 141
G PQ Q + PP D F P T P + PP T P P + C + S
Sbjct: 2344 GLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTPRPQPPPPESCCALPPRSL 2403
Query: 142 TQTARSKHFIGSETASNPEPSARPRLESEPKACELGHPTSVFTLIRKPDTPGLP 195
S+ ++ S+ + PR P + E P+ V + PD P
Sbjct: 2404 PSDPFSRVPASPQSQSSSQSPLTPR----PLSAEAFCPSPVTPRFQSPDPYSRP 2453
>gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]
Length = 1062
Score = 32.0 bits (71), Expect = 0.36
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 6/136 (4%)
Query: 63 GVGRGGAGCQGQERNNQKGLGTSKSPQRLNRPQTTSGKPPVKEDDFPPILTTPQSSPPKT 122
G+ G + + + +G T SP +T+ PP +PP +P+S+ P
Sbjct: 400 GINGGPSRMSPKAQRPLRGAKTLSSPSNRPSGETSVPPPPAVGRMYPP--RSPKSAAPAP 457
Query: 123 DSAGYPRPGTSCWIQENSGT---QTARSKHFIGSETASNPEPSARPRLESEPKACELGHP 179
SA P P + +S + ++ S +GS + ++P+ S P E E G
Sbjct: 458 ISASCPEPPIGSAVPTSSASIPVTSSVSDPGVGSISPASPKISLAPTDVKELSTKEPGRT 517
Query: 180 TSVFTLIR-KPDTPGL 194
L R PGL
Sbjct: 518 LEPQELARIAGKVPGL 533
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,140,557
Number of Sequences: 37866
Number of extensions: 575486
Number of successful extensions: 2466
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 2191
Number of HSP's gapped (non-prelim): 431
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.