LOC100133747 20403

Name: LOC100133747	Sequence: fasta or formatted (199aa)		NCBI GI: 239750460
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 11 1 C cysteine 2.0 4 1 D aspartate 3.0 6 2 E glutamate 5.0 10 1 F phenylalanine 3.5 7 1 G glycine 8.0 16 2 H histidine 3.0 6 1 I isoleucine 2.5 5 1 K lysine 8.0 16 1 L leucine 7.0 14 1 M methionine 0.5 1 1 N asparagine 4.0 8 2 P proline 11.6 23 2 Q glutamine 6.0 12 1 R arginine 6.0 12 1 S serine 10.6 21 2 T threonine 9.0 18 2 V valine 3.0 6 1 W tryptophan 0.5 1 1 Y tyrosine 1.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100293704 0.460 PREDICTED: hypothetical protein MUPCDH 0.049 mucin and cadherin-like isoform 1 BSN 0.039 bassoon protein SRRM2 0.031 splicing coactivator subunit SRm300 MUC2 0.026 mucin 2 precursor ATN1 0.026 atrophin-1 ATN1 0.026 atrophin-1 MAPT 0.026 microtubule-associated protein tau isoform 5 ZNF469 0.026 zinc finger protein 469 MLL3 0.023 myeloid/lymphoid or mixed-lineage leukemia 3 PRG4 0.023 proteoglycan 4 isoform D PRG4 0.023 proteoglycan 4 isoform C PRG4 0.023 proteoglycan 4 isoform B PRG4 0.023 proteoglycan 4 isoform A PELP1 0.021 proline, glutamic acid and leucine rich protein 1 [... MAPT 0.021 microtubule-associated protein tau isoform 2 MAPT 0.021 microtubule-associated protein tau isoform 4 MAPT 0.021 microtubule-associated protein tau isoform 3 TRIP12 0.021 thyroid hormone receptor interactor 12 SEC24D 0.021 Sec24-related protein D MUC3A 0.021 PREDICTED: mucin 3A, intestinal PLEKHN1 0.018 pleckstrin homology domain containing, family N mem... MAP1S 0.018 BPY2 interacting protein 1 CSNK1D 0.018 casein kinase 1, delta isoform 2 CSNK1D 0.018 casein kinase 1, delta isoform 1 MBD5 0.018 methyl-CpG binding domain protein 5 LOC100130360 0.018 PREDICTED: hypothetical protein MLL2 0.018 myeloid/lymphoid or mixed-lineage leukemia 2 ATXN2L 0.018 ataxin 2 related protein isoform B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.