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Search of human proteins with 239750310
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
(499 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755810 PREDICTED: hypothetical protein [Homo sapiens] 1033 0.0
gi|239750310 PREDICTED: hypothetical protein [Homo sapiens] 1033 0.0
gi|239744621 PREDICTED: hypothetical protein [Homo sapiens] 1033 0.0
gi|163965366 nascent polypeptide-associated complex alpha subuni... 63 7e-10
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 61 3e-09
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 61 3e-09
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 59 1e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 57 4e-08
gi|110832843 TBP-associated factor 4 [Homo sapiens] 55 1e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 2e-07
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 55 2e-07
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 54 3e-07
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 54 3e-07
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 54 3e-07
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 54 3e-07
gi|112421108 capicua homolog [Homo sapiens] 54 3e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 54 4e-07
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 52 1e-06
gi|33286446 opioid growth factor receptor [Homo sapiens] 51 2e-06
gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi... 51 2e-06
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 49 1e-05
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 49 1e-05
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 49 1e-05
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 49 1e-05
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 49 1e-05
gi|153792074 proline rich 12 [Homo sapiens] 49 1e-05
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 48 2e-05
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 48 2e-05
gi|55750053 atrophin-1 [Homo sapiens] 48 2e-05
gi|55750041 atrophin-1 [Homo sapiens] 48 2e-05
>gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 1033 bits (2672), Expect = 0.0
Identities = 499/499 (100%), Positives = 499/499 (100%)
Query: 1 MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL 60
MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL
Sbjct: 1 MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL 60
Query: 61 PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP 120
PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP
Sbjct: 61 PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP 120
Query: 121 RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR 180
RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR
Sbjct: 121 RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR 180
Query: 181 EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 240
EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT
Sbjct: 181 EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 240
Query: 241 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 300
ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG
Sbjct: 241 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 300
Query: 301 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 360
EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH
Sbjct: 301 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 360
Query: 361 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 420
PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP
Sbjct: 361 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 420
Query: 421 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 480
CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP
Sbjct: 421 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 480
Query: 481 HLEATGTHAGSGTCQGSRG 499
HLEATGTHAGSGTCQGSRG
Sbjct: 481 HLEATGTHAGSGTCQGSRG 499
>gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 1033 bits (2672), Expect = 0.0
Identities = 499/499 (100%), Positives = 499/499 (100%)
Query: 1 MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL 60
MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL
Sbjct: 1 MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL 60
Query: 61 PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP 120
PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP
Sbjct: 61 PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP 120
Query: 121 RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR 180
RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR
Sbjct: 121 RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR 180
Query: 181 EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 240
EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT
Sbjct: 181 EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 240
Query: 241 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 300
ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG
Sbjct: 241 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 300
Query: 301 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 360
EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH
Sbjct: 301 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 360
Query: 361 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 420
PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP
Sbjct: 361 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 420
Query: 421 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 480
CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP
Sbjct: 421 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 480
Query: 481 HLEATGTHAGSGTCQGSRG 499
HLEATGTHAGSGTCQGSRG
Sbjct: 481 HLEATGTHAGSGTCQGSRG 499
>gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
Length = 536
Score = 1033 bits (2672), Expect = 0.0
Identities = 499/499 (100%), Positives = 499/499 (100%)
Query: 1 MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL 60
MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL
Sbjct: 38 MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL 97
Query: 61 PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP 120
PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP
Sbjct: 98 PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP 157
Query: 121 RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR 180
RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR
Sbjct: 158 RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR 217
Query: 181 EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 240
EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT
Sbjct: 218 EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 277
Query: 241 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 300
ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG
Sbjct: 278 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 337
Query: 301 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 360
EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH
Sbjct: 338 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 397
Query: 361 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 420
PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP
Sbjct: 398 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 457
Query: 421 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 480
CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP
Sbjct: 458 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 517
Query: 481 HLEATGTHAGSGTCQGSRG 499
HLEATGTHAGSGTCQGSRG
Sbjct: 518 HLEATGTHAGSGTCQGSRG 536
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 62.8 bits (151), Expect = 7e-10
Identities = 130/549 (23%), Positives = 171/549 (31%), Gaps = 98/549 (17%)
Query: 6 PDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRG---TGAWSPHLPA 62
P P + K G P + +P + SP+GGL H+G T A +P P
Sbjct: 1080 PTPPAATPPSPKGG--PATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPK 1137
Query: 63 AALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYPRP 122
L P T + T S +G G PP AA P P
Sbjct: 1138 GGLATPPPKGAPTT--------PAATPPSPKG-------GLATPPPKGAPTTPAATPPSP 1182
Query: 123 TAGWRRHHSTGQPGAPVL------GGSGTAGNGGQRVSHR--------GICGPSPLQRLG 168
G G P P GG T G + G+ PSP G
Sbjct: 1183 KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPK---G 1239
Query: 169 GSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSK 228
T A P + + P G P ++ P K A PP +P
Sbjct: 1240 APTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPK- 1298
Query: 229 LGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQAS 288
G A S P P T P P PP + P A + P P+
Sbjct: 1299 ----GGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTP 1354
Query: 289 SSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRG-LRAGPRAPDAG 347
SS GG T + EG + T GG A S RG P+
Sbjct: 1355 SSKGGPTTPSSKEGP----------TPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTS 1404
Query: 348 SFWDPNPQTLAPHPQASRR-----------PRAGCSLSL-QPPHQRGLRDGCPSAAGRLS 395
P AP +R P A +SL + P + G + + +
Sbjct: 1405 PAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGD 1464
Query: 396 PALPA---PSPREVTLGSHVPARVSRRPCPPTPAELN---------------PATSSPR- 436
P LPA PSP+E V S + P TPA + PAT S R
Sbjct: 1465 PTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRR 1524
Query: 437 -PLGPLRPRAGGQSSG---------HPDRTVTSPRPIPARPRPR----TSASRPGPSPHL 482
P+ P ++ P TV SP+ PA P P+ T +S+ SP
Sbjct: 1525 DPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPA 1584
Query: 483 EATGTHAGS 491
T+ G+
Sbjct: 1585 VTPSTYKGA 1593
Score = 39.3 bits (90), Expect = 0.008
Identities = 99/406 (24%), Positives = 136/406 (33%), Gaps = 66/406 (16%)
Query: 106 PPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVL---GGSGTAGNGGQRVSHRGICGPS 162
PP+ P AA P P G P P + GT S +G GP+
Sbjct: 1305 PPKGAPTPPAATP-PSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKG--GPT 1361
Query: 163 PLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFS 222
G T A P ++ P + GP P G T+P P+ + +
Sbjct: 1362 TPSSKEGPTPPAATPSHKGGPAMTPPSP--KRGPAIPSPKG-DPTSPAVIPLSPKKAPAT 1418
Query: 223 PLFSSKLGIHGDRAGSLTALRPNP-DLVTVPLTAHP---PVHPPLRSGPPLGAGSRPRAL 278
P+ ++ G G LT P L P T+ P P P + P L A + P
Sbjct: 1419 PV--TREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPK 1476
Query: 279 CPAQTPSQASSSGGGRG-TSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGL 337
P A+SS + + A G TL + + +
Sbjct: 1477 EPPAPKQVATSSSPKKAPATPAPMGAP--------------TLPAVIPSSPKEVPATPSS 1522
Query: 338 RAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPA 397
R P AP A P TLAP +L PP PS + +PA
Sbjct: 1523 RRDPIAPTATLLSKKTPATLAPKE------------ALIPPAMT-----VPSP--KKTPA 1563
Query: 398 LPAP-----SPREVTLGSHVPARVSRRPCPPTPAEL--NPATSSPRPLGPLRPRAGGQSS 450
+P P +P S S P+P EL PA +SP P P
Sbjct: 1564 IPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTP------- 1616
Query: 451 GHPDRTVTSPRPIPARPRPRTSASRPGPSP-HLEATGTHAGSGTCQ 495
P T SP PA P P+ + + P +P L+ + T S TC+
Sbjct: 1617 --PAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCK 1660
Score = 38.9 bits (89), Expect = 0.011
Identities = 75/310 (24%), Positives = 106/310 (34%), Gaps = 50/310 (16%)
Query: 203 GKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPD-----LVTVPLTAHP 257
G AP PV+ PL + A + P+P L T+ L
Sbjct: 679 GTVSLAPKNHPVKEGTLTTLPLVPT--------ASENCPVAPSPQNTCAPLATLVLAPEI 730
Query: 258 PVHPPLRSGPPLGAG---------SRPRALCP-AQTPSQASSSGGGRGTSGAGEGHQHLL 307
P P S PP G S AL P A +P + + G + + +G
Sbjct: 731 PKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKG----- 785
Query: 308 ITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQAS--- 364
T L++ L + R +G AGP P +P + P+ S
Sbjct: 786 -TLTYLADSPSPLGVSVSPQTKRPPTKKG-SAGPDTPIGNLSSPVSPVEASFLPENSLSF 843
Query: 365 --RRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHV----PARVSR 418
+ + S PP +G PSA LSP P+E S V P
Sbjct: 844 QGSKDSPATTHSPTPPSPKGAPT--PSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPA 901
Query: 419 RPCPPTPAELNPATSSPR-------PLG-PLRPRAGGQSSGHPDRTVTSPRPIPARPRPR 470
P P L+ +SSP+ P G P P G + P T SP+ PA P P+
Sbjct: 902 TPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTP-PAATPPSPKGGPATPSPK 960
Query: 471 TSASRPGPSP 480
+ + P +P
Sbjct: 961 WAPTPPAATP 970
Score = 38.1 bits (87), Expect = 0.019
Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 25/156 (16%)
Query: 343 APDAGSFWDPNPQ---TLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGR-LSPAL 398
AP + P+P+ P P+ + P A PP +G P G +PA
Sbjct: 1008 APTPPAVTPPSPKGSPAATPFPKGASTPPAAT-----PPSPKGSPAATPLPKGAPTTPAA 1062
Query: 399 PAPSPR----------EVTLGSHVPARVSRRPCPPTP--AELNPATSSPRPLGPLR--PR 444
PSP+ T + P P P+P A + PA + P P G L P
Sbjct: 1063 TLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPH 1122
Query: 445 AGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 480
G ++ P T SP+ A P P+ + + P +P
Sbjct: 1123 KGAPTT--PAATPPSPKGGLATPPPKGAPTTPAATP 1156
Score = 35.4 bits (80), Expect = 0.12
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 12/136 (8%)
Query: 352 PNPQTL-APHPQ---ASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVT 407
P P + P P+ A+ P+ +LS+ + R P+ G PA P+P T
Sbjct: 886 PTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKAR-ATPAPKG--IPASPSPKGAP-T 941
Query: 408 LGSHVPARVSRRPCPPTP--AELNPATSSPRPLG-PLRPRAGGQSSGHPDRTVTSPRPIP 464
+ P P P+P A PA + P P G P P G + P T SP+ P
Sbjct: 942 PPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTP-PAATPPSPKGGP 1000
Query: 465 ARPRPRTSASRPGPSP 480
A P P+ + + P +P
Sbjct: 1001 ATPSPKGAPTPPAVTP 1016
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 60.8 bits (146), Expect = 3e-09
Identities = 116/450 (25%), Positives = 157/450 (34%), Gaps = 72/450 (16%)
Query: 74 PGTWFSLNRVKESITAKSRRGKVLLEGT---GKEVPPRPLPAARAAARYPRPTAGWRRHH 130
P T+ N K ++ + G+ L GK++ + + R+A +P
Sbjct: 12 PPTFALANTEKPTLNKTEQAGRNALLSDISKGKKLK-KTVTNDRSAPILDKPKGAGAGGG 70
Query: 131 STGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRV 190
G G GG G G GG G GP L G +A P+ R R
Sbjct: 71 GGGFGGGGGFGGGGGGGGGGSF----GGGGPPGL----GGLFQAGMPKLRSTANRDNDSG 122
Query: 191 GLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPN----P 246
G P PGG+ +A P P F P + G + + RP+ P
Sbjct: 123 GSRPPLLP--PGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKP 180
Query: 247 DLVTVPLTAHP-PVH--PPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTS-GAGEG 302
D + P+ + P P+ P R PP+ G PR P TP G RGT+ G G
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNRGSPPVPGG--PRQPSPGPTPPPFP---GNRGTALGGGSI 235
Query: 303 HQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGL--RAGPRAPDAGSFWDPNPQTLAPH 360
Q L + SN + + R L + P P G+ + + + P
Sbjct: 236 RQSPLSSSSPFSNR----------PPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP 285
Query: 361 PQASRRP------RAGCSLSLQPPHQRGLRDGCP-----SAAGRLSPALPAPSPREVTLG 409
P + +P R S PP R G P S+ +P LP R ++L
Sbjct: 286 PPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQ---RNLSLS 342
Query: 410 SHVPARVS---RRPCPPTPAELNP--ATSSPRPLGPLRPRAGGQSSGHPDRT-------- 456
S P S P PP P+E P P GPL P +G R
Sbjct: 343 SSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLP 402
Query: 457 ----VTSPRPIPARPRP--RTSASRPGPSP 480
V SPR P P P R SA P P P
Sbjct: 403 SRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 41.6 bits (96), Expect = 0.002
Identities = 86/334 (25%), Positives = 104/334 (31%), Gaps = 91/334 (27%)
Query: 107 PRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQR 166
PRP+ ++ P P G R S G P G GTA GG SPL
Sbjct: 191 PRPIQSSPHNRGSP-PVPGGPRQPSPGPTPPPFPGNRGTALGGGS-------IRQSPLSS 242
Query: 167 LGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFS 226
+ P P L KP P P + P +E PPP P Q P+ S
Sbjct: 243 SSPFSNRPPLPPTPSRALDDKPPP--PPPPVGNRPSIHREAVPPPPP----QNNKPPVPS 296
Query: 227 SKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQ 286
+ P P + A PP PP R GPP P
Sbjct: 297 T----------------PRPSASS---QAPPPPPPPSRPGPP---------------PLP 322
Query: 287 ASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDA 346
SSSG + L LS+ L S G R+GP P
Sbjct: 323 PSSSGN--------DETPRLPQRNLSLSSSTPPLPSPG-------------RSGPLPP-- 359
Query: 347 GSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREV 406
P + P P P L PP R +G S A +P LP+ S
Sbjct: 360 -------PPSERPPPPVRDPPGRSGPLPPPPPVSR---NGSTSRALPATPQLPSRS---- 405
Query: 407 TLGSHVPARVSRRPCPPTPAELNPATSSPRPLGP 440
G P R P PP P+ +P P P
Sbjct: 406 --GVDSPRSGPRPPLPPD----RPSAGAPPPPPP 433
Score = 40.0 bits (92), Expect = 0.005
Identities = 57/254 (22%), Positives = 76/254 (29%), Gaps = 31/254 (12%)
Query: 258 PVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTS----GAGEGHQHLLITYRVL 313
PV PP PP AL + P+ + GR G+ + + R
Sbjct: 2 PVPPPPAPPPP-----PTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSA 56
Query: 314 SNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSL 373
L + +G G G G G GSF P L QA
Sbjct: 57 PILDKPKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGM-------- 108
Query: 374 SLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATS 433
P R + + G P LP P+ R P P P
Sbjct: 109 ----PKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEP 164
Query: 434 SPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPR----------PRTSASRPGPSPHLE 483
+ P RP G + P ++PRPI + P PR + P P P
Sbjct: 165 QRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPG 224
Query: 484 ATGTHAGSGTCQGS 497
GT G G+ + S
Sbjct: 225 NRGTALGGGSIRQS 238
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 60.8 bits (146), Expect = 3e-09
Identities = 116/450 (25%), Positives = 157/450 (34%), Gaps = 72/450 (16%)
Query: 74 PGTWFSLNRVKESITAKSRRGKVLLEGT---GKEVPPRPLPAARAAARYPRPTAGWRRHH 130
P T+ N K ++ + G+ L GK++ + + R+A +P
Sbjct: 12 PPTFALANTEKPTLNKTEQAGRNALLSDISKGKKLK-KTVTNDRSAPILDKPKGAGAGGG 70
Query: 131 STGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRV 190
G G GG G G GG G GP L G +A P+ R R
Sbjct: 71 GGGFGGGGGFGGGGGGGGGGSF----GGGGPPGL----GGLFQAGMPKLRSTANRDNDSG 122
Query: 191 GLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPN----P 246
G P PGG+ +A P P F P + G + + RP+ P
Sbjct: 123 GSRPPLLP--PGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKP 180
Query: 247 DLVTVPLTAHP-PVH--PPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTS-GAGEG 302
D + P+ + P P+ P R PP+ G PR P TP G RGT+ G G
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNRGSPPVPGG--PRQPSPGPTPPPFP---GNRGTALGGGSI 235
Query: 303 HQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGL--RAGPRAPDAGSFWDPNPQTLAPH 360
Q L + SN + + R L + P P G+ + + + P
Sbjct: 236 RQSPLSSSSPFSNR----------PPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP 285
Query: 361 PQASRRP------RAGCSLSLQPPHQRGLRDGCP-----SAAGRLSPALPAPSPREVTLG 409
P + +P R S PP R G P S+ +P LP R ++L
Sbjct: 286 PPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQ---RNLSLS 342
Query: 410 SHVPARVS---RRPCPPTPAELNP--ATSSPRPLGPLRPRAGGQSSGHPDRT-------- 456
S P S P PP P+E P P GPL P +G R
Sbjct: 343 SSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLP 402
Query: 457 ----VTSPRPIPARPRP--RTSASRPGPSP 480
V SPR P P P R SA P P P
Sbjct: 403 SRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 41.6 bits (96), Expect = 0.002
Identities = 86/334 (25%), Positives = 104/334 (31%), Gaps = 91/334 (27%)
Query: 107 PRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQR 166
PRP+ ++ P P G R S G P G GTA GG SPL
Sbjct: 191 PRPIQSSPHNRGSP-PVPGGPRQPSPGPTPPPFPGNRGTALGGGS-------IRQSPLSS 242
Query: 167 LGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFS 226
+ P P L KP P P + P +E PPP P Q P+ S
Sbjct: 243 SSPFSNRPPLPPTPSRALDDKPPP--PPPPVGNRPSIHREAVPPPPP----QNNKPPVPS 296
Query: 227 SKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQ 286
+ P P + A PP PP R GPP P
Sbjct: 297 T----------------PRPSASS---QAPPPPPPPSRPGPP---------------PLP 322
Query: 287 ASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDA 346
SSSG + L LS+ L S G R+GP P
Sbjct: 323 PSSSGN--------DETPRLPQRNLSLSSSTPPLPSPG-------------RSGPLPP-- 359
Query: 347 GSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREV 406
P + P P P L PP R +G S A +P LP+ S
Sbjct: 360 -------PPSERPPPPVRDPPGRSGPLPPPPPVSR---NGSTSRALPATPQLPSRS---- 405
Query: 407 TLGSHVPARVSRRPCPPTPAELNPATSSPRPLGP 440
G P R P PP P+ +P P P
Sbjct: 406 --GVDSPRSGPRPPLPPD----RPSAGAPPPPPP 433
Score = 40.0 bits (92), Expect = 0.005
Identities = 57/254 (22%), Positives = 76/254 (29%), Gaps = 31/254 (12%)
Query: 258 PVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTS----GAGEGHQHLLITYRVL 313
PV PP PP AL + P+ + GR G+ + + R
Sbjct: 2 PVPPPPAPPPP-----PTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSA 56
Query: 314 SNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSL 373
L + +G G G G G GSF P L QA
Sbjct: 57 PILDKPKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGM-------- 108
Query: 374 SLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATS 433
P R + + G P LP P+ R P P P
Sbjct: 109 ----PKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEP 164
Query: 434 SPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPR----------PRTSASRPGPSPHLE 483
+ P RP G + P ++PRPI + P PR + P P P
Sbjct: 165 QRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPG 224
Query: 484 ATGTHAGSGTCQGS 497
GT G G+ + S
Sbjct: 225 NRGTALGGGSIRQS 238
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 58.5 bits (140), Expect = 1e-08
Identities = 131/508 (25%), Positives = 159/508 (31%), Gaps = 111/508 (21%)
Query: 3 SPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVL-LQSLSPEGGLRA--AEHRGTGAWSPH 59
+P P P + + P H+P VL L SP R G G+
Sbjct: 1373 APQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKS 1432
Query: 60 LPAAALELCRAML--LPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAA 117
LPA+ R++L LP T + G +LL+ G E PP P P
Sbjct: 1433 LPASPPAARRSLLHRLPPTAPGV-------------GPLLLQ-LGTE-PPAPHPGVSKPW 1477
Query: 118 RYPRPTAGWR-----RHHSTGQPGAPVLGGSGTAGNGGQRV---SHRGICGPSPLQRLGG 169
R P R R QP APV G G G V S R PSP
Sbjct: 1478 RSAAPEEPERLPLHVRFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRRSVPPSPTSPRAS 1537
Query: 170 STGEAPR------------------------PRNREAHLRRKPRVGLEPGPHSSLPGGKQ 205
P P ++ KP L PGP LP
Sbjct: 1538 EENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTPA 1597
Query: 206 ETAP-PPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHP-PVHPPL 263
P PP P P ++ A SLT+ +T +A P HPP
Sbjct: 1598 PATPLPPVP--------PPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDPHPP- 1648
Query: 264 RSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSG 323
GPP A P A P P + SG S + H L T S L G
Sbjct: 1649 --GPPAPAAPAPAAPQPGPDPPPGTDSGIEEVDSRSSSDHP--LETISSASTLSSLSAEG 1704
Query: 324 GGVASMRISVGRGLRAGPRAPDA----------GSFWDPN----PQTLAPHPQASRRPRA 369
GG A G G+ +GP D G P PQ + P R
Sbjct: 1705 GGSAGGGGGAGAGVASGPELLDTYVAYLDGQAFGGSSTPGPPYPPQLMTPSKLRGR--AL 1762
Query: 370 GCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPC--PPT--- 424
G S L+P GLRD P P SP G+ ++ R C PPT
Sbjct: 1763 GASGGLRPGPSGGLRD----------PVTPT-SPTVSVTGAGTDGLLALRACSGPPTAGV 1811
Query: 425 ------------PAELNPATSSPRPLGP 440
P L A+S PR L P
Sbjct: 1812 AGGPVAVEPEVPPVPLPTASSLPRKLLP 1839
Score = 42.7 bits (99), Expect = 8e-04
Identities = 89/391 (22%), Positives = 121/391 (30%), Gaps = 98/391 (25%)
Query: 103 KEVPPRPL--PAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICG 160
+++PP P P + P P+ S+G+ GG G+GG
Sbjct: 918 EDIPPPPTTSPPEPPYSTPPVPS-------SSGRLTPSPRGGPFNPGSGG---------- 960
Query: 161 PSPLQRLGGSTGEAPRPRNREAHLRRKP--RVGLEPGPHSSLPGGKQETAPPPQPVRTTQ 218
PL ++ + P P + R K G P H P APPPQP
Sbjct: 961 --PLPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQP----- 1013
Query: 219 TFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRAL 278
H A HPP P + +G P L
Sbjct: 1014 -------------HHHHA-------------------HPPHPPEMETGG--SPDDPPPRL 1039
Query: 279 CPAQTPSQASSSGGGRG-TSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGL 337
PS GGG T GA H +GGG S + R
Sbjct: 1040 ALGPQPSLRGWRGGGPSPTPGAPSPSHHG--------------SAGGGGGSSQGPALRYF 1085
Query: 338 RAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLS---LQPPHQRGLRDGCPSAAGRL 394
+ PRA A + P S R R G + ++ Q+G G P A
Sbjct: 1086 QLPPRAASAAMYV----------PARSGRGRKGPLVKQTKVEGEPQKG--GGLPPAPSPT 1133
Query: 395 SPALPAPSPREVTLGSH----VPARVSRRPCPPTPAELNPATSSP-RPLGPLRPRAGGQS 449
SPA P P P +P + + P + + +S+ P P GG
Sbjct: 1134 SPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGGGG 1193
Query: 450 SGHPDRTVTSPRPIPARPRP-RTSASRPGPS 479
G + P+P P P T AS GP+
Sbjct: 1194 GGSSPSPAPAMSPVPPSPSPVPTPASPSGPA 1224
Score = 41.6 bits (96), Expect = 0.002
Identities = 45/163 (27%), Positives = 55/163 (33%), Gaps = 23/163 (14%)
Query: 352 PNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPA----PSPREVT 407
P P T P P S P S L P + G + P + G L + PA PSP +
Sbjct: 922 PPPTTSPPEPPYSTPPVPSSSGRLTPSPRGGPFN--PGSGGPLPASSPASFDGPSPPDTR 979
Query: 408 LGSHVPARVSRRPCPPT-----------PAELNPATSSPRPLGPLRPRAGGQSSGHPDRT 456
+GS + P PP P P P GG P R
Sbjct: 980 VGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRL 1039
Query: 457 VTSPRPIPARPR---PRTSASRPGPSPHLEATGTHAGSGTCQG 496
P+P R P + P PS H A G G G+ QG
Sbjct: 1040 ALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGG---GGGSSQG 1079
Score = 40.8 bits (94), Expect = 0.003
Identities = 91/389 (23%), Positives = 117/389 (30%), Gaps = 70/389 (17%)
Query: 142 GSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRN--------REAHLRRKPRVGLE 193
GS G GG + P PL + TG+A P + RE L+ G
Sbjct: 1316 GSRAYGGGGGSSAFTSFLPPRPL--VHPLTGKALDPASPLGLALAARERALKESSEGGGA 1373
Query: 194 PGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPL 253
P P P + E PP + P+ D A R L
Sbjct: 1374 PQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSL 1433
Query: 254 TAHPPV--HPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYR 311
A PP L PP G P L P S A E + L + R
Sbjct: 1434 PASPPAARRSLLHRLPPTAPGVGPLLLQLGTEPPAPHPGVSKPWRSAAPEEPERLPLHVR 1493
Query: 312 VLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRA-- 369
L N + ++ GRG P + D P+P+ P S PRA
Sbjct: 1494 FLENCQ---------PRAPVTSGRG----PPSEDGPGVPPPSPRRSVPPSPTS--PRASE 1538
Query: 370 --GCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAE 427
G L + PP + G P P P E + P P TP
Sbjct: 1539 ENGLPLLVLPPPAPSV----DVEDGEFLFVEPLPPPLEFSNSFEKPES------PLTPGP 1588
Query: 428 LNPATSSPRPLGPLRPRAGGQSSGHP---DRTVTS-----------------------PR 461
+P +P P PL P + P D T +S P
Sbjct: 1589 PHPLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDPHPP 1648
Query: 462 PIPARPRPRTSASRPGPSPHLEATGTHAG 490
PA P +A +PGP P GT +G
Sbjct: 1649 GPPAPAAPAPAAPQPGPDP---PPGTDSG 1674
Score = 38.1 bits (87), Expect = 0.019
Identities = 49/162 (30%), Positives = 60/162 (37%), Gaps = 15/162 (9%)
Query: 341 PRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLS--PAL 398
P GS DP P+ LA PQ S R G S P G G S PAL
Sbjct: 1024 PEMETGGSPDDPPPR-LALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPAL 1082
Query: 399 P--APSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRT 456
PR + +VPAR R P + G P+ GG P T
Sbjct: 1083 RYFQLPPRAASAAMYVPARSGR-------GRKGPLVKQTKVEG--EPQKGGGLPPAPSPT 1133
Query: 457 V-TSPRPIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGS 497
SP+P PA P S P P+ ++A T + + QGS
Sbjct: 1134 SPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGS 1175
Score = 35.8 bits (81), Expect = 0.093
Identities = 100/432 (23%), Positives = 136/432 (31%), Gaps = 87/432 (20%)
Query: 105 VPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGI------ 158
VPP P P A+ T + T Q GA ++G + G R
Sbjct: 1207 VPPSPSPVPTPASPSGPATLDF-----TSQFGAALVGAARREGGWQNEARRRSTLFLSTD 1261
Query: 159 CGPSPLQRLGGSTGEAPRPRNR------EAHLRRKPRVGLEP----------GPHSSLPG 202
G G TG AP PR R E +P + LE G S G
Sbjct: 1262 AGDEDGGDGGLGTGAAPGPRLRHSKSIDEGMFSAEPYLRLESAGSGAGYGGYGAGSRAYG 1321
Query: 203 GKQETAP-----PPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHP 257
G ++ PP+P+ T + +S LG+ A AL+ + + P
Sbjct: 1322 GGGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLA--LAARERALKESSEGGGAPQPPPR 1379
Query: 258 PVHPPLRSGPPLGAGSRPRA-------LCPAQTPSQASSSGGGRGTSGAGEGHQHLLITY 310
P P + PP P A L A P A G R G+ E
Sbjct: 1380 PPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSLPASPPA 1439
Query: 311 RVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAG------SFWDPNPQTLAPHPQ-- 362
S L R + GV + + +G P AP G S P+ L H +
Sbjct: 1440 ARRSLLHRLPPTAPGVGPLLLQLG----TEPPAPHPGVSKPWRSAAPEEPERLPLHVRFL 1495
Query: 363 ASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCP 422
+ +PRA + PP + G P +P PSPR R P
Sbjct: 1496 ENCQPRAPVTSGRGPPSEDG-------------PGVPPPSPR--------------RSVP 1528
Query: 423 PTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIP-------ARPRPRTSASR 475
P+P + + PL L P A + P P P +P +
Sbjct: 1529 PSPTSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGP 1588
Query: 476 PGPSPHLEATGT 487
P P P A T
Sbjct: 1589 PHPLPDTPAPAT 1600
Score = 34.3 bits (77), Expect = 0.27
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 100 GTGKEVPPRPLPAARAAARYPRPTA-GWRRHHSTGQPGAPVLGGSGTAGNGG---QRVSH 155
G+ + PPR A P+P+ GWR + PGAP G+AG GG Q +
Sbjct: 1030 GSPDDPPPR-------LALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPAL 1082
Query: 156 RGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAP-PPQP 213
R P P A R R+ L ++ +V EP LP T+P PQP
Sbjct: 1083 RYFQLP-PRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQP 1140
Score = 33.9 bits (76), Expect = 0.35
Identities = 88/356 (24%), Positives = 112/356 (31%), Gaps = 84/356 (23%)
Query: 22 PQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPAAALELCRAMLLPGTWFSLN 81
PQ TP +L ++L GGLR G P P + G +L
Sbjct: 1749 PQLMTPSKL----RGRALGASGGLRPGPSGGLR--DPVTPTSPTVSVTGAGTDGL-LALR 1801
Query: 82 RVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLG 141
TA G V +E EVPP PLP A+ PR W G P P+ G
Sbjct: 1802 ACSGPPTAGVAGGPVAVE---PEVPPVPLP---TASSLPRKLLPW--EEGPGPPPPPLPG 1853
Query: 142 GSGTAGNGGQRVSHRGICG--PSPLQRLGGST---------------------GEAPRPR 178
I S LQ+ GGS+ G A
Sbjct: 1854 PLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGGGDSHHGGASYVP 1913
Query: 179 NREAHLRRK-----PRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHG 233
R + L+R+ + L P SSL Q PP P T T SP ++ G
Sbjct: 1914 ERTSSLQRQRLSDDSQSSLLSKPVSSL---FQNWPKPPLPPLPTGTGVSPTAAAAPGATS 1970
Query: 234 DRAGS------------------LTALRPNPDLV--------------TVPLTAHPPVHP 261
A S L P+P L+ ++P+ P++P
Sbjct: 1971 PSASSSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYP 2030
Query: 262 PL---RSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLS 314
L R P GAG P P SG G GA G L R+LS
Sbjct: 2031 GLFDIRGSPTGGAGGSADPFAPVFVPPHPGISG---GLGGALSGASRSLSPTRLLS 2083
Score = 32.7 bits (73), Expect = 0.79
Identities = 135/574 (23%), Positives = 181/574 (31%), Gaps = 151/574 (26%)
Query: 40 SPEGGLRAAEHRGT---GAWSPHLPAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKV 96
SP G + H G+ G S PA R LP S + + + R+G +
Sbjct: 1056 SPTPGAPSPSHHGSAGGGGGSSQGPAL-----RYFQLPPRAASAAMYVPARSGRGRKGPL 1110
Query: 97 L----LEGT---GKEVPPRPLPAARAAARYPRPTAGWRRHH------------STGQPGA 137
+ +EG G +PP P P + A+ + P A + ST G
Sbjct: 1111 VKQTKVEGEPQKGGGLPPAPSPTSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGR 1170
Query: 138 PVLGGS------------GTAGNGGQRVSHRGICG---------PSPLQRLGGST----- 171
G S G G GG S P+P G +T
Sbjct: 1171 SSQGSSTEAEPPTQPEPTGGGGGGGSSPSPAPAMSPVPPSPSPVPTPASPSGPATLDFTS 1230
Query: 172 -------GEAPRPRNREAHLRRKPRVGL--EPGPHSSLPGGKQETAPPPQPVRTTQTFFS 222
G A R + RR+ + L + G GG A P +R +++
Sbjct: 1231 QFGAALVGAARREGGWQNEARRRSTLFLSTDAGDEDGGDGGLGTGAAPGPRLRHSKSIDE 1290
Query: 223 PLFSSKLGIHGDRAGSLTAL------------RPNPDLVTVPLTAHPPVHP----PLRSG 266
+FS++ + + AGS T L P VHP L
Sbjct: 1291 GMFSAEPYLRLESAGSGAGYGGYGAGSRAYGGGGGSSAFTSFLPPRPLVHPLTGKALDPA 1350
Query: 267 PPLGAGSRPRALCPAQTPSQASSSGGG------RGTSGAGEG----------HQHLLITY 310
PLG AL + + SS GGG R S E H H
Sbjct: 1351 SPLGL-----ALAARERALKESSEGGGAPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVL 1405
Query: 311 RVL-----SNLRRTLCSGGGVASMRISV-------GRGL--RAGPRAPDAGS-FWDPNPQ 355
R+ RR L G+ S S+ R L R P AP G +
Sbjct: 1406 RLWGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGTE 1465
Query: 356 TLAPHPQASRRPRAGCSLSLQ--PPHQRGLRDGCPSA---AGR-----LSPALPAPSPRE 405
APHP S+ R+ + P H R L + P A +GR P +P PSPR
Sbjct: 1466 PPAPHPGVSKPWRSAAPEEPERLPLHVRFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRR 1525
Query: 406 VTLGSHVPARVSRR----------PCP-------------PTPAELNPATSSPRPLGPLR 442
S R S P P P P L + S +P PL
Sbjct: 1526 SVPPSPTSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLT 1585
Query: 443 PRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRP 476
P G PD T P+P P P +A+ P
Sbjct: 1586 P---GPPHPLPD-TPAPATPLPPVPPPAVAAAPP 1615
Score = 31.6 bits (70), Expect = 1.8
Identities = 46/158 (29%), Positives = 56/158 (35%), Gaps = 27/158 (17%)
Query: 351 DPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCP--------SAAGRLSPALPAPS 402
D P +P A RR G L++ P R D SA G S P P
Sbjct: 406 DVVPFQESPKYAARRRGPPGTGLTVPPALLRANSDTSMALPDWMVFSAPGAASSGAPGP- 464
Query: 403 PREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSG-HPDRTVTSPR 461
T GS ++ S P T S+ P G RA S G HP+ PR
Sbjct: 465 ----TSGSQGQSQPS---APTTKLSSGTLRSASSPRGA---RARSPSRGRHPEDAKRQPR 514
Query: 462 PIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGSRG 499
P+ + R GP+ TG G G GSRG
Sbjct: 515 GRPSS----SGTPREGPAG---GTGGSGGPGGSLGSRG 545
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 57.0 bits (136), Expect = 4e-08
Identities = 110/427 (25%), Positives = 148/427 (34%), Gaps = 74/427 (17%)
Query: 89 AKSRRGKVLLEGTGKEVP-PRPLPAARAA--ARYPRPTAGWRRHHSTGQPGAPVLGGSGT 145
A +RR + G EV PRP P+AR PR + HST +P +P +
Sbjct: 175 AMARRSRA----AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEP-SPAARRRPS 229
Query: 146 AGNGGQRVSHRGICGPS-PLQ---RLGGSTGEAPRPRNREAHLRRKPRVGLEP------- 194
AG G QR + R + + PL R G S PR + + K L P
Sbjct: 230 AGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR 289
Query: 195 -------GPHSSLP-------GGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 240
GP SS P G K PPP T P S L A
Sbjct: 290 KDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPP-SPPLATPLPLAPPSP 348
Query: 241 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 300
+ P+ + P P PP + PP+ A + + P Q P +S S
Sbjct: 349 SAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPL- 407
Query: 301 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 360
LS+L+ T G S L PR A +P A
Sbjct: 408 -----------ALSSLQATTSLGSPTLQATHSF---LTMSPRQTQASL---TSPSRPAST 450
Query: 361 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPAL-PAPSPREVTLGSHVPARVSRR 419
P S +A SL PP Q LSPA+ P SP + + + S
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTS-----------LSPAVSPLSSPLTIHPLQALSSLASHS 499
Query: 420 PCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSP--RPIPA-RPRPRTSASRP 476
P P + + P + L P S P ++T+P +P+ P P +AS P
Sbjct: 500 PQAPLSSLIMPPLETQSSLAP-------PSLQTPPASLTTPPLENLPSLAPPPLQTASAP 552
Query: 477 GPSPHLE 483
+PHLE
Sbjct: 553 LTTPHLE 559
Score = 55.5 bits (132), Expect = 1e-07
Identities = 89/340 (26%), Positives = 104/340 (30%), Gaps = 65/340 (19%)
Query: 161 PSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 220
PSP S P PR L P + + P P +SLP PP P
Sbjct: 739 PSPPASPPMSPSATPPPR--VPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPP 796
Query: 221 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 280
L S G S P+ L PL PP PP+ + P L P A
Sbjct: 797 LQALPSPPASFPGQAPFS-----PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPT 851
Query: 281 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 340
Q P + + G SG R TL L G
Sbjct: 852 LQAPRRPPTPGPDTSVSGP-----------------RLTL---------------ALAPG 879
Query: 341 PRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSL--QPPHQRGLRDGCPSAAGRLSPAL 398
P P P + +P S AG S S P RG G P SP
Sbjct: 880 P----------PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSG-PEGGAAASP-- 926
Query: 399 PAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVT 458
P + L + PA SR P PP P P P P G S+
Sbjct: 927 ----PPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWP-----PATGPGSADGLCTIYE 977
Query: 459 SPRPIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGSR 498
+ P A P P A PGPSP AG+G SR
Sbjct: 978 TEGPESATPAP--GALDPGPSPGTSGGKAAAGAGAGASSR 1015
Score = 51.2 bits (121), Expect = 2e-06
Identities = 106/398 (26%), Positives = 127/398 (31%), Gaps = 61/398 (15%)
Query: 111 PAARAAARY-PRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICG---PSPLQR 166
PAARA PRP R VLG +G G GI G P R
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 167 LG-------GSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPP-------- 211
G S A RP R P PGP SS T P P
Sbjct: 77 AGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRI 136
Query: 212 ---QPVRTTQTFFSPLFSS-KLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGP 267
+ V + +P S+ G D +G T P+P + A V P P
Sbjct: 137 SAEETVARGKATEAPKRSALSAGARRDTSGP-TPGTPSPAMARRSRAAGTEVGLPR---P 192
Query: 268 PLGAGSRPRALCPAQTPSQASS------SGGGRGTSGAGEGHQHLLITYRVLSNLRRTLC 321
A RP P ++ S AS S R AG G Q R+L
Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQR---------PASRSLS 243
Query: 322 SGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQR 381
S S G R PRAP S P P+ L QA R P+ + PP
Sbjct: 244 SSATPLSSPARSGPSARGTPRAPAHPS--QPKPKGL----QALRPPQ------VTPPR-- 289
Query: 382 GLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPL 441
+D P+ S L PSP P + P P T +P ++P PL P
Sbjct: 290 --KDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPP-SPPLATPLPLAPP 346
Query: 442 RPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPS 479
P A P T P P P T + PS
Sbjct: 347 SPSAPPSLQTLPSPPATPPSQAP--PSMTTPPMQAPPS 382
Score = 36.6 bits (83), Expect = 0.054
Identities = 81/326 (24%), Positives = 101/326 (30%), Gaps = 54/326 (16%)
Query: 177 PRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPL---FSSKLGIHG 233
PR +A L R P L A PP QT SP SS L IH
Sbjct: 434 PRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPP-----LQTSLSPAVSPLSSPLTIHP 488
Query: 234 DRAGSLTALR----PNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASS 289
+A S A P L+ PL + PP PP + P P+ P +
Sbjct: 489 LQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQT 548
Query: 290 SGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSF 349
+ T +L C A + P S
Sbjct: 549 ASAPLTTP-----------------HLETPPCP----APCPLQAPPSPLTTPPPETPSSI 587
Query: 350 WDPNPQT----LAP----------HPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLS 395
P PQ +P P A+ P+A L+L PP Q P A+ LS
Sbjct: 588 ATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLAL-PPLQA---PPSPPASPPLS 643
Query: 396 P-ALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPD 454
P A P+P + A S P PP A +P S P P S P
Sbjct: 644 PLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 703
Query: 455 RTVTSPRPIPARPRPRTSASRPGPSP 480
V P PA P SA+ P +P
Sbjct: 704 LQV--PPSPPASPPMSPSATPPPQAP 727
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 55.5 bits (132), Expect = 1e-07
Identities = 94/364 (25%), Positives = 115/364 (31%), Gaps = 85/364 (23%)
Query: 129 HHSTGQPGAPVL--GGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRR 186
HH P P + +G GN S G G P G+ G AP P
Sbjct: 39 HHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEP--------- 89
Query: 187 KPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNP 246
P PG GG + PP P R PL + A LRP P
Sbjct: 90 PPAGRARPG------GGGPQRPGPPSPRR-------PL------VPAGPAPPAAKLRPPP 130
Query: 247 D-----LVTVPLTAHPPVHP-PLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 300
+ VP A P P +GP AG P AL P G G G G G
Sbjct: 131 EGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAG--PAALAARAGPGPGPGPGPGPGP-GPG 187
Query: 301 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 360
+ +G G A L + A A S + P L P
Sbjct: 188 KP-------------------AGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPL 228
Query: 361 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 420
P +P A ++ PP P+A PA PA PA + P
Sbjct: 229 P----KPAAPGTVIQTPPFVGAAAPPAPAAPS--PPAAPA------------PAAPAAAP 270
Query: 421 CPPTPAELNPATSSPRPLGP------LRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSAS 474
PP PA A P GP + P A Q+ G +P P PA P +
Sbjct: 271 PPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAG---AAPAPAPAAGGPAGVSG 327
Query: 475 RPGP 478
+PGP
Sbjct: 328 QPGP 331
Score = 43.9 bits (102), Expect = 3e-04
Identities = 109/465 (23%), Positives = 141/465 (30%), Gaps = 94/465 (20%)
Query: 31 VLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPAAALELCRAMLLPGTWFSLNRVKESITAK 90
V++ L+ SL + AA H +P + AAA ++ G+ + A+
Sbjct: 21 VVSDLVGSLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAE 80
Query: 91 SR---------RGKVLLEGTGKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPG--APV 139
G+ G G + P P P P P A R G G APV
Sbjct: 81 GAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPV 140
Query: 140 LGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGP--- 196
+ A G + G P+ L G P P P G PGP
Sbjct: 141 PAAAAVAA--GPEPAPAGPAKPAGPAALAARAGPGPGP---------GPGPGPGPGPGKP 189
Query: 197 -------------------HSSLP------GGKQETAPPPQPVRTTQTFFSPLFSSKLGI 231
H++ P G P P+P +P F
Sbjct: 190 AGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAP 249
Query: 232 HGDRAGSLTALRPNPDLVTVPLTAHPPVHP-PLRSGPPLGAGSRPRALCPAQTPSQASSS 290
A S A P P P A PP P P P G + P PA P A+ +
Sbjct: 250 PAPAAPSPPA-APAP---AAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQN 305
Query: 291 GGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGS-- 348
GG G + A + GG A + G G A AP +
Sbjct: 306 GGSAGAAPA-------------------PAPAAGGPAGVSGQPGPGAAAAAPAPGVKAES 346
Query: 349 ------FWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPS 402
P QTLA AS S+ + P Q L PS A PA P+
Sbjct: 347 PKRVVQAAPPAAQTLAASGPAS----TAASMVIGPTMQGAL----PSPAAVPPPAPGTPT 398
Query: 403 PREVTLGSHVPARVSRRPCPPTP---AELNPATSSPR-PLGPLRP 443
V +SR P T A L P +PR P P P
Sbjct: 399 GLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNP 443
Score = 30.4 bits (67), Expect = 3.9
Identities = 56/227 (24%), Positives = 71/227 (31%), Gaps = 26/227 (11%)
Query: 265 SGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLR-RTLCSG 323
+GP A P A +A GGG G + L+ + R G
Sbjct: 73 AGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEG 132
Query: 324 GGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGL 383
+ + + AGP AG P LA RAG P G
Sbjct: 133 SAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAA--------RAGPGPGPGPGPGPGP 184
Query: 384 RDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGP--- 440
G P+ G A + L SH A + PA L P P+P P
Sbjct: 185 GPGKPAGPG----AAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPL---PKPAAPGTV 237
Query: 441 --LRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEAT 485
P G + P +P P PA P P A+ P P P AT
Sbjct: 238 IQTPPFVGAAAPPAP----AAPSP-PAAPAPAAPAAAPPPPPPAPAT 279
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 54.7 bits (130), Expect = 2e-07
Identities = 112/404 (27%), Positives = 135/404 (33%), Gaps = 72/404 (17%)
Query: 111 PAARAAARY-PRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICG---PSPLQR 166
PAARA PRP R VLG +G G GI G P R
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 167 LG-------GSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPP-------- 211
G S A RP R P PGP SS T P P
Sbjct: 77 AGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRI 136
Query: 212 ---QPVRTTQTFFSPLFSS-KLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGP 267
+ V + +P S+ G D +G T P+P + A V P P
Sbjct: 137 SAEETVARGKATEAPKRSALSAGARRDTSGP-TPGTPSPAMARRSRAAGTEVGLPR---P 192
Query: 268 PLGAGSRPRALCPAQTPSQASS------SGGGRGTSGAGEGHQHLLITYRVLSNLRRTLC 321
A RP P ++ S AS S R AG G Q R+L
Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQR---------PASRSLS 243
Query: 322 SGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQR 381
S S G R PRAP S P P+ L QA R P+ + PP
Sbjct: 244 SSATPLSSPARSGPSARGTPRAPAHPS--QPKPKGL----QALRPPQ------VTPPR-- 289
Query: 382 GLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPL 441
+D P+ S L PSP L S P + P P + L ++P PL P
Sbjct: 290 --KDAAPALGPLSSSPLATPSP-SAALQSQAPPTL---PATPHSSSLTCQLATPLPLAPP 343
Query: 442 RPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEAT 485
P A P T P P PA P + + S SP L+AT
Sbjct: 344 SPSA-------PPSLQTLPSP-PATPPSQATTSL--GSPTLQAT 377
Score = 53.5 bits (127), Expect = 4e-07
Identities = 103/404 (25%), Positives = 130/404 (32%), Gaps = 88/404 (21%)
Query: 89 AKSRRGKVLLEGTGKEVP-PRPLPAARAA--ARYPRPTAGWRRHHSTGQPGAPVLGGSGT 145
A +RR + G EV PRP P+AR PR + HST +P +P +
Sbjct: 175 AMARRSRA----AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEP-SPAARRRPS 229
Query: 146 AGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQ 205
AG G QR + R L S P R PR P P G Q
Sbjct: 230 AGGGLQRPASRS---------LSSSATPLSSPARSGPSARGTPRAPAHPSQPK--PKGLQ 278
Query: 206 ETAPPP--QPVRTTQTFFSPLFSSKLGIHG------DRAGSLTALRPNPDLVTVPLTAHP 257
PP P + PL SS L +A P+ +T L
Sbjct: 279 ALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPL 338
Query: 258 PVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLR 317
P+ PP S PP + PA PSQA++S G
Sbjct: 339 PLAPPSPSAPP---SLQTLPSPPATPPSQATTSLGS------------------------ 371
Query: 318 RTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQP 377
P SF P + P A+ P+A +L+L P
Sbjct: 372 -----------------------PTLQATHSFLPSPPLS----PLATPPPQAPPALAL-P 403
Query: 378 PHQRGLRDGCPSAAGRLSP-ALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPR 436
P Q P A+ LSP A P+P + A S P PP A +P S P
Sbjct: 404 PLQA---PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPV 460
Query: 437 PLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 480
P S P V P PA P SA+ P +P
Sbjct: 461 SPSATPPSQAPPSLAAPPLQV--PPSPPASPPMSPSATPPPQAP 502
Score = 45.8 bits (107), Expect = 9e-05
Identities = 68/257 (26%), Positives = 80/257 (31%), Gaps = 58/257 (22%)
Query: 244 PNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGH 303
P+ L PL PP PP+ + P L P A Q P + + G SG
Sbjct: 546 PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP---- 601
Query: 304 QHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQA 363
R TL L GP P P + +P
Sbjct: 602 -------------RLTL---------------ALAPGP----------PPPPSRSPSSTL 623
Query: 364 SRRPRAGCSLSL--QPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPC 421
S AG S S P RG G P SP P + L + PA SR P
Sbjct: 624 SGPDLAGHSSSATSTPEELRGYDSG-PEGGAAASP------PPDAELAACHPAAWSRGPA 676
Query: 422 PPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPH 481
PP P P P P G S+ + P A P P A PGPSP
Sbjct: 677 PPLAFRGAPGAPLPWP-----PATGPGSADGLCTIYETEGPESATPAP--GALDPGPSPG 729
Query: 482 LEATGTHAGSGTCQGSR 498
AG+G SR
Sbjct: 730 TSGGKAAAGAGAGASSR 746
Score = 32.3 bits (72), Expect = 1.0
Identities = 51/192 (26%), Positives = 68/192 (35%), Gaps = 25/192 (13%)
Query: 317 RRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQ 376
+R G A + GL PR P GS P P T P A R A ++ +
Sbjct: 4 KRDKAKAGAAARTPAARAPGLLT-PRPP--GSPRPPPPVT----PAALRVLGAAGAVGRK 56
Query: 377 PPHQRGLRDG---CPSAAGRLSPAL--------PAPSPREVTLGSHVPARVSRRPCPPTP 425
P +R G P +A R P PA P G P + P P +
Sbjct: 57 PLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSS 116
Query: 426 AELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPR--PIPARPRPRTSASRPG-PSPHL 482
T+ P PLG R + + + +P+ + A R TS PG PSP +
Sbjct: 117 PGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM 176
Query: 483 ----EATGTHAG 490
A GT G
Sbjct: 177 ARRSRAAGTEVG 188
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 54.7 bits (130), Expect = 2e-07
Identities = 111/420 (26%), Positives = 140/420 (33%), Gaps = 81/420 (19%)
Query: 142 GSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAP-RPRNREAHLRRKPRVGLEPG---PH 197
G+ G +R + + P P L G +GE P + + GL PG P
Sbjct: 189 GAKRGGPPVKRAAEPPVVQPVPPAALSGPSGEEGLSPGGKRRRGCNSEQTGLPPGLPLPP 248
Query: 198 SSLPGGKQETAPPPQPVRTTQTFFSPLFS-SKLGI----HGD-----RAGSLTALR---- 243
LP PPP P+ T SP F +K G+ HGD R GS R
Sbjct: 249 PPLPPPPPPPPPPPPPLPGLAT--SPPFQLTKPGLWSTLHGDAWGPERKGSAPPERQEQR 306
Query: 244 ---PNPDLVTVPL-TAHPPVHPPLRSGPPLGAGSRP-----RALCPAQTPS----QASSS 290
P+P P TAHPP H + + PP G G RP PA P + S
Sbjct: 307 HSLPHPYPYPAPAYTAHPPGHRLVPAAPP-GPGPRPPGAESHGCLPATRPPGSDLRESRV 365
Query: 291 GGGRGTSGAGEGHQHLLITYRVL--SNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGS 348
R S + Y L T S +S + RG+ P P A
Sbjct: 366 QRSRMDSSVSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGL-RGVEPNPGIPGADH 424
Query: 349 FWDPNPQT-----LAPHPQASRRPRAGC-----SLSL--------QPPHQRGLRDGCPSA 390
+ P + L P +SR+P G LSL PP R LR P
Sbjct: 425 YQTPALEVSHHGRLGPSAHSSRKPFLGAPAATPHLSLPPGPSSPPPPPCPRLLRPP-PPP 483
Query: 391 AGRLSPALPAPSP-----REVTLGSHVPARVSRRPCPPTPAELNPATS-----------S 434
A PA A E+ G+ P R + P P L P S
Sbjct: 484 AWLKGPACRAAREDGEILEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSHTP 543
Query: 435 PRPLGPLRPRAGGQSSGH---PDRTVTSPRP------IPARPRPRTSASRPGPSPHLEAT 485
P P P + S H P V+ P P I PRP + A P P + T
Sbjct: 544 PTPPTPTTSSSNSNSGSHSSSPAGPVSFPPPPYLARSIDPLPRPPSPAQNPQDPPLVPLT 603
Score = 36.6 bits (83), Expect = 0.054
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 26/102 (25%)
Query: 374 SLQPPHQRGLRD----GCPSAAGRLSPALPAPSPREVTL-GSHVPARVSRRPCPPTPAEL 428
++ PP R R+ G S AG S P P PR L G A + + PP PA L
Sbjct: 4 AVDPPGARAAREAFALGGLSCAGAWSSCPPHPPPRSAWLPGGRCSASIGQ---PPLPAPL 60
Query: 429 NPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPR 470
P+ G SSGHP + P P P PR
Sbjct: 61 PPSH--------------GSSSGHPSK----PYYAPGAPTPR 84
Score = 33.9 bits (76), Expect = 0.35
Identities = 30/102 (29%), Positives = 33/102 (32%), Gaps = 40/102 (39%)
Query: 133 GQPGAPVLGGSGTAGNGGQR--------------------VSHRGICGPSPLQRLGGSTG 172
G PG S ++ N G R VSH G GPS
Sbjct: 392 GLPGTTTSSSSSSSSNTGLRGVEPNPGIPGADHYQTPALEVSHHGRLGPS---------- 441
Query: 173 EAPRPRNREAHLRRKPRVGLEPG-PHSSLPGGKQETAPPPQP 213
AH RKP +G PH SLP G PPP P
Sbjct: 442 ---------AHSSRKPFLGAPAATPHLSLPPGPSSPPPPPCP 474
Score = 31.6 bits (70), Expect = 1.8
Identities = 79/360 (21%), Positives = 113/360 (31%), Gaps = 88/360 (24%)
Query: 106 PPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQ 165
PP LP A++P P+ + P L S + GQ+ +RG
Sbjct: 771 PPPALPPPPPLAKFPPPSQP--QPPPPPPPSPASLLKSLASVLEGQKYCYRGT------- 821
Query: 166 RLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPP-----PQPVRTTQTF 220
G + P P P PGP S +A P PQP ++ +
Sbjct: 822 --GAAVSTRPGPL---------PTTQYSPGPPSGATALPPTSAAPSAQGSPQPSASSSSQ 870
Query: 221 FS----PLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPV----------------- 259
FS P + G +T +P P L P + V
Sbjct: 871 FSTSGGPWARERRAGEEPVPGPMTPTQPPPPLSLPPARSESEVLEEISRACETLVERVGR 930
Query: 260 -----HPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLS 314
P+ + P +G+ R L PAQ +A GG SG+ + Q ++
Sbjct: 931 SATDPADPVDTAEPADSGTE-RLLPPAQAKEEA---GGVAAVSGSCKRRQK---EHQKEH 983
Query: 315 NLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLS 374
R C SVGR R G + A P+ R G +L
Sbjct: 984 RRHRRACKD--------SVGRRPREG------------RAKAKAKVPKEKSRRVLG-NLD 1022
Query: 375 LQPPHQRGLRDGCPSAAGRLS---------PALPAPSPREVTLGSHVPARVSRRPCPPTP 425
LQ +G P G P+ PAPS + + VP + +R P P
Sbjct: 1023 LQSEEIQGREKSRPDLGGASKAKPPTAPAPPSAPAPSAQPTPPSASVPGKKAREEAPGPP 1082
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 54.3 bits (129), Expect = 3e-07
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 28/213 (13%)
Query: 102 GKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGP 161
G++VP P R P P R H G P + L G+G N G+ G
Sbjct: 483 GQQVPGFPTAPTRVVIARPTPPQA-RPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ 541
Query: 162 ---SPLQRLGGSTGEAPRPRNREAHLRR-KPRVGLEPGPHSSLPGGKQETAPPPQPVRTT 217
P+ G+ G AP P A GP PGG + P PQP
Sbjct: 542 LLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGP---APGGPAQPPPTPQP-SMA 597
Query: 218 QTFFSPLFSSKLGIHGDRAG-------SLTALRPN--------PDLVTVPLTAHPPVHPP 262
FS L + LG G AG ++T P D + TA PP PP
Sbjct: 598 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP 657
Query: 263 LRSGPPLGAGSRPRALCPAQTPSQASSSGGGRG 295
PP + + P +PS + S GG G
Sbjct: 658 ----PPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 54.3 bits (129), Expect = 3e-07
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 28/213 (13%)
Query: 102 GKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGP 161
G++VP P R P P R H G P + L G+G N G+ G
Sbjct: 483 GQQVPGFPTAPTRVVIARPTPPQA-RPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ 541
Query: 162 ---SPLQRLGGSTGEAPRPRNREAHLRR-KPRVGLEPGPHSSLPGGKQETAPPPQPVRTT 217
P+ G+ G AP P A GP PGG + P PQP
Sbjct: 542 LLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGP---APGGPAQPPPTPQP-SMA 597
Query: 218 QTFFSPLFSSKLGIHGDRAG-------SLTALRPN--------PDLVTVPLTAHPPVHPP 262
FS L + LG G AG ++T P D + TA PP PP
Sbjct: 598 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP 657
Query: 263 LRSGPPLGAGSRPRALCPAQTPSQASSSGGGRG 295
PP + + P +PS + S GG G
Sbjct: 658 ----PPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 54.3 bits (129), Expect = 3e-07
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 28/213 (13%)
Query: 102 GKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGP 161
G++VP P R P P R H G P + L G+G N G+ G
Sbjct: 483 GQQVPGFPTAPTRVVIARPTPPQA-RPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ 541
Query: 162 ---SPLQRLGGSTGEAPRPRNREAHLRR-KPRVGLEPGPHSSLPGGKQETAPPPQPVRTT 217
P+ G+ G AP P A GP PGG + P PQP
Sbjct: 542 LLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGP---APGGPAQPPPTPQP-SMA 597
Query: 218 QTFFSPLFSSKLGIHGDRAG-------SLTALRPN--------PDLVTVPLTAHPPVHPP 262
FS L + LG G AG ++T P D + TA PP PP
Sbjct: 598 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP 657
Query: 263 LRSGPPLGAGSRPRALCPAQTPSQASSSGGGRG 295
PP + + P +PS + S GG G
Sbjct: 658 ----PPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 54.3 bits (129), Expect = 3e-07
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 28/213 (13%)
Query: 102 GKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGP 161
G++VP P R P P R H G P + L G+G N G+ G
Sbjct: 489 GQQVPGFPTAPTRVVIARPTPPQA-RPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ 547
Query: 162 ---SPLQRLGGSTGEAPRPRNREAHLRR-KPRVGLEPGPHSSLPGGKQETAPPPQPVRTT 217
P+ G+ G AP P A GP PGG + P PQP
Sbjct: 548 LLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGP---APGGPAQPPPTPQP-SMA 603
Query: 218 QTFFSPLFSSKLGIHGDRAG-------SLTALRPN--------PDLVTVPLTAHPPVHPP 262
FS L + LG G AG ++T P D + TA PP PP
Sbjct: 604 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP 663
Query: 263 LRSGPPLGAGSRPRALCPAQTPSQASSSGGGRG 295
PP + + P +PS + S GG G
Sbjct: 664 ----PPPPPAPEQQTMPPPGSPSGGAGSPGGLG 692
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 54.3 bits (129), Expect = 3e-07
Identities = 112/437 (25%), Positives = 153/437 (35%), Gaps = 79/437 (18%)
Query: 107 PRPLPAARAAARY-PRPTAGWRRHHSTGQPGAPVLGG--SGTAGNGGQRVSHRGICGPSP 163
P P P +AAA P PT R T PG G + TA G + P P
Sbjct: 842 PAPAPGTKAAAPSGPAPTTSIR---FTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPP 898
Query: 164 LQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSP 223
+ S +AP P L K V L P S+ GG A P P+ SP
Sbjct: 899 KAQ-SVSPVQAPPPGGSAQLLPGKVLVPLA-APSMSVRGGG---AGQPLPL------VSP 947
Query: 224 LFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRP-RALCPAQ 282
FS + + L P P V+ P PP+ P GP S+P + L P+
Sbjct: 948 PFSVPVQNGAQPPSKIIQLTPVP--VSTPSGLVPPLSPATLPGPT----SQPQKVLLPSS 1001
Query: 283 TPSQASSSGGGR----GTSGAGEGHQHLLITYRVLSNLRRTLCSGG--GVASMRISVGRG 336
T S GG GTS A + +Y S++ S G G A ++ + G
Sbjct: 1002 TRITYVQSAGGHALPLGTSPASS-QAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAG 1060
Query: 337 LR----------------------AGPRAPDAGSFWD--PNPQTLAPHPQASRRPRA--- 369
A P P +F+ P P + AP Q S+ P +
Sbjct: 1061 QAPLLAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVY 1120
Query: 370 GCSLSLQPPHQRGLRDGCPS-AAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAEL 428
+ S PP L G P+ A +P P PS ++ + A ++RP P P ++
Sbjct: 1121 TVATSTTPPAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKV 1180
Query: 429 N--------------------PATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPR 468
PA P GP+R +S T +P P+P
Sbjct: 1181 KAAIASIPVGSFEAGASGRPGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWT 1240
Query: 469 PRTSASRPGPSPHLEAT 485
P +S P P P E T
Sbjct: 1241 PTARSSPPLPPPAEERT 1257
Score = 39.7 bits (91), Expect = 0.006
Identities = 66/255 (25%), Positives = 89/255 (34%), Gaps = 55/255 (21%)
Query: 252 PLTAHPP--VHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGG-GRGTSGAGEGHQHLLI 308
PL PP PP+ G G+ A PA + + A++S G GT A E
Sbjct: 509 PLDPEPPGPPDPPVAFGKGYGSAPSSSASSPASSSASAATSFSLGSGTFKAQES------ 562
Query: 309 TYRVLSNLRRTLCSGGGVASMRISVGRGLRAG---PRAPDAGSFWDPNPQT--LAPHPQA 363
G+G AG P P AG P+ T L P
Sbjct: 563 -------------------------GQGSTAGPLRPPPPGAGGPATPSKATRFLPMDPAT 597
Query: 364 SRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPP 423
RR R L+PP + PS G + L P +E G ARV P
Sbjct: 598 FRRKRPESVGGLEPPGPSVIA-APPSGGGNILQTLVLPPNKEEQEGG--GARV-----PS 649
Query: 424 TPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLE 483
PA P+ + P PL A + ++P PI ++P P + + P+ +
Sbjct: 650 APA---PSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPN---D 703
Query: 484 ATGTHAGSGTCQGSR 498
G GT GSR
Sbjct: 704 TAGARTEMGT--GSR 716
Score = 30.4 bits (67), Expect = 3.9
Identities = 88/364 (24%), Positives = 115/364 (31%), Gaps = 83/364 (22%)
Query: 142 GSGT--AGNGGQRVSHRGICGPSPLQRLGGSTGEAPR--PRNREAHLRRKPRV--GLEPG 195
GSGT A GQ + + P P + +A R P + R++P GLEP
Sbjct: 553 GSGTFKAQESGQGSTAGPLRPPPPGAGGPATPSKATRFLPMDPATFRRKRPESVGGLEP- 611
Query: 196 PHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTA 255
PG APP QT P + G R S A
Sbjct: 612 -----PGPSVIAAPPSGGGNILQTLVLPPNKEEQEGGGARVPSAPA-------------- 652
Query: 256 HPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSN 315
P L G P SRP A SS+ + I +
Sbjct: 653 -----PSLAYGAPAAPLSRPAATMVTNVVRPVSSTP--------------VPIASKPFPT 693
Query: 316 LRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLA---PHPQASRRPRAGCS 372
R S A R +G G R +P S + ++ A P P P G +
Sbjct: 694 SGRAEASPNDTAGARTEMGTGSRVPGGSPLGVSLVYSDKKSAAATSPAPHLVAGPLLG-T 752
Query: 373 LSLQPPHQRGLRDGCPSAAGRLSPALP-----APSPREVTLGSHVPARVSRRPCPPTPAE 427
+ P L G P PA+ AP T GS A
Sbjct: 753 VGKAPATVTNLLVGTPGYGAPAPPAVQFIAQGAPGGG-TTAGSGAGA------------- 798
Query: 428 LNPATSSPRPLGPLRPRAGGQSSG----------HPDRTVTSPRPIPARPRPRTSASRP- 476
+ P PLG L+P A G++ G P + +P P PA P T A+ P
Sbjct: 799 -GSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQVAPAPAPA---PGTKAAAPS 854
Query: 477 GPSP 480
GP+P
Sbjct: 855 GPAP 858
Score = 29.3 bits (64), Expect = 8.7
Identities = 26/100 (26%), Positives = 35/100 (35%), Gaps = 22/100 (22%)
Query: 398 LPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTV 457
+ A +P E G+ P P PP +P P G P + SG T
Sbjct: 1519 MQAATPTEQPPGAEAP-----LPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSG----TA 1569
Query: 458 TSPRPIPARPRPRTSASRPG-----------PSPHLEATG 486
+ P+P P P + +PG P P ATG
Sbjct: 1570 QAAPPLP--PPPESGPGQPGWEGAPQPSPPPPGPSTAATG 1607
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 53.5 bits (127), Expect = 4e-07
Identities = 115/440 (26%), Positives = 149/440 (33%), Gaps = 79/440 (17%)
Query: 89 AKSRRGKVLLEGTGKEVP-PRPLPAARAA--ARYPRPTAGWRRHHSTGQPGAPVLGGSGT 145
A +RR + G EV PRP P+AR PR + HST +P +P +
Sbjct: 166 AMARRSRA----AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEP-SPAARRRPS 220
Query: 146 AGNGGQRVSHRGICGPS-PLQ---RLGGSTGEAPRPRNREAHLRRKPRVGLEP------- 194
AG G QR + R + + PL R G S PR + + K L P
Sbjct: 221 AGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR 280
Query: 195 -------GPHSSLPGGKQETAPPPQPVR--TTQTFFSPLFS----SKLGIHGDRAGSLTA 241
GP SS P + PP P + QT SP + + + + +
Sbjct: 281 KDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 340
Query: 242 LRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRA---LCPAQTPSQASSSGGGRGTSG 298
P+P L PL PP PP + PPL A P A L P TPS + +
Sbjct: 341 FLPSPPLS--PLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALA----- 393
Query: 299 AGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGR--------GLRAGP-RAPDAGSF 349
HLL AS +S L A P + P +
Sbjct: 394 -----VHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPA 448
Query: 350 WDPNPQTLAPHPQASRRPRAGCSLSL-QPPHQRGLRDGCPSAAGRLSPALPAPSPREVTL 408
P + P PQA P A L L +PP Q P SP P +
Sbjct: 449 SPPMSPSATPPPQAP-PPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSP 507
Query: 409 GSHVPARVSRRPCPPTPAEL--------NPATSSPRPLGPLRPRAGGQSSGHPDRTVTSP 460
+ +P P P P L +SP P RP G PD +V+ P
Sbjct: 508 SASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPG-----PDTSVSGP 562
Query: 461 RPIPARPRPRTSASRPGPSP 480
R T A PGP P
Sbjct: 563 R--------LTLALAPGPPP 574
Score = 45.8 bits (107), Expect = 9e-05
Identities = 68/257 (26%), Positives = 80/257 (31%), Gaps = 58/257 (22%)
Query: 244 PNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGH 303
P+ L PL PP PP+ + P L P A Q P + + G SG
Sbjct: 507 PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP---- 562
Query: 304 QHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQA 363
R TL L GP P P + +P
Sbjct: 563 -------------RLTL---------------ALAPGP----------PPPPSRSPSSTL 584
Query: 364 SRRPRAGCSLSL--QPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPC 421
S AG S S P RG G P SP P + L + PA SR P
Sbjct: 585 SGPDLAGHSSSATSTPEELRGYDSG-PEGGAAASP------PPDAELAACHPAAWSRGPA 637
Query: 422 PPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPH 481
PP P P P P G S+ + P A P P A PGPSP
Sbjct: 638 PPLAFRGAPGAPLPWP-----PATGPGSADGLCTIYETEGPESATPAP--GALDPGPSPG 690
Query: 482 LEATGTHAGSGTCQGSR 498
AG+G SR
Sbjct: 691 TSGGKAAAGAGAGASSR 707
Score = 42.4 bits (98), Expect = 0.001
Identities = 74/289 (25%), Positives = 99/289 (34%), Gaps = 64/289 (22%)
Query: 194 PGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPL 253
PG + P G PP P + K +RAG + T+P
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKP--LAERAGGIGG-------ATIPE 72
Query: 254 TAHPPVHPPLRSGPPLGAGSRPRALCPAQ--TPSQASSSGGGRGTSGAGE-GHQHLLITY 310
+A P P S PP A R PA+ +P SS G GT+ G G + L I+
Sbjct: 73 SA-PRAGPTRTSRPP--ASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS- 128
Query: 311 RVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAG 370
T+ G + + S L AG R +G P P T P P +RR RA
Sbjct: 129 -----AEETVARGKATEAPKRSA---LSAGARRDTSG----PTPGT--PSPAMARRSRAA 174
Query: 371 CSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNP 430
G G P A P P PR+ +
Sbjct: 175 -----------GTEVGLPRPAPSARPRPPTEGPRKSVSSAS-----------------EH 206
Query: 431 ATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPS 479
+T+ P P RP AGG R+++S P +S +R GPS
Sbjct: 207 STTEPSPAARRRPSAGGGLQRPASRSLSS------SATPLSSPARSGPS 249
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 52.4 bits (124), Expect = 1e-06
Identities = 48/159 (30%), Positives = 62/159 (38%), Gaps = 17/159 (10%)
Query: 333 VGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDG--CPSA 390
V +G GP+APD+ + P PQ A P P + SL PHQ L D PS
Sbjct: 739 VAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSL----PHQAPLGDSPHLPSP 794
Query: 391 AGRLSPALPAPSPREVTLGSHVPARVSRRPCPP--TPAELNPATSSPRPLGPLRPRAGGQ 448
P+ P P+ V S P+ PCPP P L LG P
Sbjct: 795 HPTRPPSRPPSRPQSV---SRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPP----- 846
Query: 449 SSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGT 487
+ +P T P P RP+ + P+PHL + T
Sbjct: 847 -ASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSST 884
Score = 33.9 bits (76), Expect = 0.35
Identities = 118/490 (24%), Positives = 165/490 (33%), Gaps = 105/490 (21%)
Query: 9 ASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPAAALELC 68
AS S AGLV Q + +A L S GG AA TG S A A L
Sbjct: 276 ASAGVSPQGAGLVIQKNLSA--AVATTLNGNSVFGGAGAAS-APTGTPSGQPLAVAPGLG 332
Query: 69 RAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPL-PAARAAARYPRPTAGWR 127
+ L+P L+R I K +L ++ P+P PA P A
Sbjct: 333 SSPLVPAPNVILHRTPTPIQPKPAG---VLPPKLYQLTPKPFAPAGATLTIQGEPGA--- 386
Query: 128 RHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPS---------PLQRLGGSTGEAPRPR 178
QP AP AG GQ V G P+ P G + + P
Sbjct: 387 ---LPQQPKAPQNLTFMAAGKAGQNVVLSGFPAPALQANVFKQPPATTTGAAPPQPPGAL 443
Query: 179 NR--EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRA 236
++ HL + + P H LPG Q P V+ Q S+ G +
Sbjct: 444 SKPMSVHLLNQGSSIVIPAQHM-LPGQNQFLLPGAPAVQLPQQL-----SALPANVGGQI 497
Query: 237 GSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGT 296
+ A L+ P+ + + PL GP L S
Sbjct: 498 LAAAAPHTGGQLIANPILTNQNLAGPLSLGPVLAPHS----------------------- 534
Query: 297 SGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGR-GLRAGPRAPDAGSFWDPNPQ 355
G H+L ++ I VG+ L P + AGS P
Sbjct: 535 ---GAHSAHIL-------------------SAAPIQVGQPALFQMPVSLAAGSL--PTQS 570
Query: 356 TLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPAR 415
AP A+ G +L PP + + + G + PA PA + G P
Sbjct: 571 QPAPAGPAATTVLQGVTL---PPSAVAMLN---TPDGLVQPATPAAAT-----GEAAPV- 618
Query: 416 VSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASR 475
++ +P P P PA S+P PLG +P+A + +P P A P A+
Sbjct: 619 LTVQPAPQAP----PAVSTPLPLGLQQPQA--------QQPPQAPTPQAAAP---PQATT 663
Query: 476 PGPSPHLEAT 485
P PSP L ++
Sbjct: 664 PQPSPGLASS 673
Score = 33.5 bits (75), Expect = 0.46
Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 17/127 (13%)
Query: 353 NPQTLAPHP-QASRRPRAGCSLSLQPPHQRGLRDGCPSA---AGRLSPALPAPSPREVTL 408
NP AP P Q RP++ PP SA + S LPAP+P + L
Sbjct: 849 NPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQL 908
Query: 409 GSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPR 468
+ P PP L P ++P P P + VT+ P PA P+
Sbjct: 909 QFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPP-----------RTFQMVTT--PFPALPQ 955
Query: 469 PRTSASR 475
P+ R
Sbjct: 956 PKALLER 962
Score = 32.7 bits (73), Expect = 0.79
Identities = 58/235 (24%), Positives = 82/235 (34%), Gaps = 44/235 (18%)
Query: 258 PVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITY-RVLSNL 316
P H PL S P GA ++P P P++ GG G S + +T+ R S+L
Sbjct: 1222 PGHGPLSSSAP-GASTQP----PPHLPTKLVIRHGGAGGSPS--------VTWARASSSL 1268
Query: 317 RRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQ 376
+ S +S+ A + G P P P P + R+ L L+
Sbjct: 1269 SSSSSSSSAASSLD------------ADEDG----PMPSRNRP-PIKTYEARSRIGLKLK 1311
Query: 377 PPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPR 436
+ GL + A L P P P + P R P PP ++N P
Sbjct: 1312 IKQEAGLSKVVHNTA--LDPVHQPPPPPATLKVAEPPPRPP--PPPPPTGQMNGTVDHPP 1367
Query: 437 PLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGTHAGS 491
P P R G ++ H R +P R R + PG A GS
Sbjct: 1368 PAAPERKPLG--TAPHCPR-------LPLRKTYRENVGGPGAPEGTPAGRARGGS 1413
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 51.2 bits (121), Expect = 2e-06
Identities = 84/301 (27%), Positives = 105/301 (34%), Gaps = 40/301 (13%)
Query: 195 GPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNP----DLVT 250
GP S GG+ + P P+ V PL S+ GD AG RP P +
Sbjct: 331 GPEHSKGGGRVDEGPQPRSVEPQDA--GPLERSQ----GDEAGGHGEDRPEPLSPKESKK 384
Query: 251 VPLTAHPPVHPPLRSGPPLGAGSRPRAL-CPAQTPSQASSSGGGRGTSGAGEGHQHLLIT 309
L PP GP + AL SQ S G + G G
Sbjct: 385 RKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGE------ 438
Query: 310 YRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLA--PHPQASRRP 367
+ R+ L G VA V + + A D+ + QTLA P S P
Sbjct: 439 --AVQPCRQPL--GARVAD---KVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHP 491
Query: 368 RAGCS---LSLQPPHQRGLRDGCPSAAGRL---SPALPA-PSPREVTLGSHVPARVSRRP 420
+AG S + + G ++G P + SPA PA P E S P P
Sbjct: 492 KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESP--SETPGPRPAGP 549
Query: 421 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASR-PGPS 479
PAE T PRP GP AG + + P T P R P S S PGP
Sbjct: 550 AGDEPAESPSETPGPRPAGP----AGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPR 605
Query: 480 P 480
P
Sbjct: 606 P 606
Score = 41.2 bits (95), Expect = 0.002
Identities = 102/405 (25%), Positives = 131/405 (32%), Gaps = 82/405 (20%)
Query: 120 PRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRN 179
P P G R+ G PG P S T G CGP + GG E P+PR+
Sbjct: 301 PHPLEGSRKVEEEGSPGDPDHEAS-TQGR---------TCGPEH-SKGGGRVDEGPQPRS 349
Query: 180 REAHLRRKPRVGLEPGP----HSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDR 235
E + GP GG E P P SP S K + R
Sbjct: 350 VEPQ---------DAGPLERSQGDEAGGHGEDRPEP---------LSPKESKKRKLELSR 391
Query: 236 AGSLTALRPNP------DLVTVPLTAHPPVHPPLRSGPPLGAGSRP-RALCPAQTPSQAS 288
P P + + + L LR+G G P A+ P + P A
Sbjct: 392 REQ-PPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGAR 450
Query: 289 SSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGG----------GVASMRISVGRGLR 338
+ R EG + V S +TL G G + + R
Sbjct: 451 VADKVRKRRKVDEGAGD---SAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGR 507
Query: 339 AGPRAPDAGSFWD-PNPQTLAP-------HPQASRRPR----AGCSLSLQPPHQRGLRDG 386
GP+ GS + P P P P + PR AG + P G R
Sbjct: 508 TGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPA 567
Query: 387 CPSAAGRL-SPA-LPAPSPREVTLG------SHVPARVSRRPCPPTPAELNPATSSPRPL 438
P+ SP+ P PSP T S P P PAE T PRP
Sbjct: 568 GPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPA 627
Query: 439 GPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLE 483
GP AG + + P T P P PA P R ++ G + L+
Sbjct: 628 GP----AGDEPAESPSET---PGPSPAGP-TRDEPAKAGEAAELQ 664
>gi|113429443 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 492
Score = 51.2 bits (121), Expect = 2e-06
Identities = 108/397 (27%), Positives = 138/397 (34%), Gaps = 95/397 (23%)
Query: 107 PRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGI---CGPSP 163
PR L +R + Y P W + TG+P A + G +R SH + CG +
Sbjct: 98 PRRLDQSRCS-NYDTPA--WVQ---TGRPPARARDTAAPRDPGRER-SHTAVYAVCGVAA 150
Query: 164 LQRLGG-----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQ 218
L L G A PR R R + +PGP LP T PP
Sbjct: 151 LLVLAGIGARLGLERAHSPRARRTVTRALTELLKQPGPQEPLP----PTLGPP------- 199
Query: 219 TFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPP-LGAGSRPRA 277
++G R + P + A PP P +R PP L A + R
Sbjct: 200 --LGGCVQVQMGDGLPRGSPHNSAGPRTPRLA---RASPPGEPFMRVAPPGLAAAAAARD 254
Query: 278 LCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGL 337
P P G G GE R+ S R G S R + GRGL
Sbjct: 255 SEPGPVP----------GAGGCGED--------RLGSQPRP---ENGPPGSHRTASGRGL 293
Query: 338 RAGPR----------------APDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQR 381
R G APD + + AP P R + G SL+LQP + +
Sbjct: 294 RRGDSEGGVNRGIGPSRVSLLAPDKKRLNNAPRGSAAPGPPRGPRLQGGGSLTLQPDYAK 353
Query: 382 ---------GLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPAT 432
+ P + PAL PSPR+ PAR + RP P PA L+
Sbjct: 354 YATFKAAALKAAEAAPRDFCQRFPAL-EPSPRQ------PPAR-APRPSPDLPAPLDACP 405
Query: 433 SSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRP 469
+P P P A G P TS R PARP P
Sbjct: 406 WAPPVYAP--PAAPG-----PYAAWTSSR--PARPAP 433
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 48.5 bits (114), Expect = 1e-05
Identities = 79/295 (26%), Positives = 101/295 (34%), Gaps = 56/295 (18%)
Query: 227 SKLGIHGDRAGSLTALRPNPD---LVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQT 283
S LG+ GD +L L P P ++V L P P S AG P + PA+
Sbjct: 83 SGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASS--AAAGKTPPSRVPAEP 140
Query: 284 PSQASSS-------------GGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVA--- 327
S+ +S GRG +GA G L T R R G A
Sbjct: 141 SSRRGASKRRESWRTDGERLRSGRGCAGAARGPDASLDTRR--EGWPRAAVVGRHEARRL 198
Query: 328 SMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDG- 386
+SV L GP + S + ++ A H ++S R C Q P QR L G
Sbjct: 199 KPGVSVSSSLSPGPPLQRSSSL-NETLRSAAAHAESSARE---CGKRTQRPEQRFLCRGS 254
Query: 387 --CPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPR 444
C RL P P P RRP P PA A + R G P
Sbjct: 255 SFCGHRPQRLHPGRPLPP--------------QRRPPGPAPA----AAGATR--GTAAPP 294
Query: 445 AGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGSRG 499
S+ D P P+ AR + P + L G AG G + G
Sbjct: 295 GRDPSAWFLDSASACPTPLAAR------SWHPFVANKLCGRGKGAGGGASRPKEG 343
Score = 31.6 bits (70), Expect = 1.8
Identities = 35/143 (24%), Positives = 46/143 (32%), Gaps = 26/143 (18%)
Query: 362 QASRRPRAGCSLSLQPPHQRG-----LRDGCPSAAGRLSPALPAPSPREVTLGSHVPARV 416
+A RRP G H RG RD + L P E LG P
Sbjct: 51 RAERRPARG-------KHVRGGGVGGCRDSRAGGSHAAPSGLGVPGDSESALGLLEPG-- 101
Query: 417 SRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRP 476
PP ++ PRAG ++ T P +PA P R AS+
Sbjct: 102 -----PPKSLRISVTLGQA-------PRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKR 149
Query: 477 GPSPHLEATGTHAGSGTCQGSRG 499
S + +G G +RG
Sbjct: 150 RESWRTDGERLRSGRGCAGAARG 172
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 48.5 bits (114), Expect = 1e-05
Identities = 48/155 (30%), Positives = 55/155 (35%), Gaps = 13/155 (8%)
Query: 324 GGVASMRISVGRGLRAGPRAPD----AGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPH 379
GG A R+ VG G G P P A HP A R A LS
Sbjct: 16 GGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAA 75
Query: 380 QRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLG 439
Q R P G A P P + VPA S P P P+ P S P G
Sbjct: 76 QPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPS--G 133
Query: 440 PLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSAS 474
P RP P + +PRP ARP P+ S +
Sbjct: 134 PHRPVL-------PPSALAAPRPPLARPLPQGSVT 161
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 48.5 bits (114), Expect = 1e-05
Identities = 79/295 (26%), Positives = 101/295 (34%), Gaps = 56/295 (18%)
Query: 227 SKLGIHGDRAGSLTALRPNPD---LVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQT 283
S LG+ GD +L L P P ++V L P P S AG P + PA+
Sbjct: 83 SGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASS--AAAGKTPPSRVPAEP 140
Query: 284 PSQASSS-------------GGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVA--- 327
S+ +S GRG +GA G L T R R G A
Sbjct: 141 SSRRGASKRRESWRTDGERLRSGRGCAGAARGPDASLDTRR--EGWPRAAVVGRHEARRL 198
Query: 328 SMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDG- 386
+SV L GP + S + ++ A H ++S R C Q P QR L G
Sbjct: 199 KPGVSVSSSLSPGPPLQRSSSL-NETLRSAAAHAESSARE---CGKRTQRPEQRFLCRGS 254
Query: 387 --CPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPR 444
C RL P P P RRP P PA A + R G P
Sbjct: 255 SFCGHRPQRLHPGRPLPP--------------QRRPPGPAPA----AAGATR--GTAAPP 294
Query: 445 AGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGSRG 499
S+ D P P+ AR + P + L G AG G + G
Sbjct: 295 GRDPSAWFLDSASACPTPLAAR------SWHPFVANKLCGRGKGAGGGASRPKEG 343
Score = 31.6 bits (70), Expect = 1.8
Identities = 35/143 (24%), Positives = 46/143 (32%), Gaps = 26/143 (18%)
Query: 362 QASRRPRAGCSLSLQPPHQRG-----LRDGCPSAAGRLSPALPAPSPREVTLGSHVPARV 416
+A RRP G H RG RD + L P E LG P
Sbjct: 51 RAERRPARG-------KHVRGGGVGGCRDSRAGGSHAAPSGLGVPGDSESALGLLEPG-- 101
Query: 417 SRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRP 476
PP ++ PRAG ++ T P +PA P R AS+
Sbjct: 102 -----PPKSLRISVTLGQA-------PRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKR 149
Query: 477 GPSPHLEATGTHAGSGTCQGSRG 499
S + +G G +RG
Sbjct: 150 RESWRTDGERLRSGRGCAGAARG 172
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 48.5 bits (114), Expect = 1e-05
Identities = 48/155 (30%), Positives = 55/155 (35%), Gaps = 13/155 (8%)
Query: 324 GGVASMRISVGRGLRAGPRAPD----AGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPH 379
GG A R+ VG G G P P A HP A R A LS
Sbjct: 16 GGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAA 75
Query: 380 QRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLG 439
Q R P G A P P + VPA S P P P+ P S P G
Sbjct: 76 QPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPS--G 133
Query: 440 PLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSAS 474
P RP P + +PRP ARP P+ S +
Sbjct: 134 PHRPVL-------PPSALAAPRPPLARPLPQGSVT 161
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 48.5 bits (114), Expect = 1e-05
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 28/148 (18%)
Query: 354 PQTLAPHPQASRRPR--AGCSLSLQPPHQRGLRDGCPSAA---GRLSPALPAPSPREVTL 408
P+T AP +RR + A ++ PP G R P+ G SP P PR + +
Sbjct: 552 PETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRL-V 610
Query: 409 GSHV---------------PARVSRRPCPPTPAELNPATSSPRPLGPLRPR-----AGGQ 448
GS + PAR R P +P+ +P +SP P+ P A
Sbjct: 611 GSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPAQVDLGAATA 670
Query: 449 SSGHPDRT--VTSPRPIPARPRPRTSAS 474
G P+ V +P IP +PRPR+ AS
Sbjct: 671 EGGAPEAISGVPTPPAIPPQPRPRSLAS 698
Score = 33.5 bits (75), Expect = 0.46
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 16/95 (16%)
Query: 388 PSAAGRLSPALPAPSPREV-TLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAG 446
P+ A +PA PAP+P L S + PP PA S P P+
Sbjct: 505 PTPATTPAPA-PAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVE---- 559
Query: 447 GQSSGHPDRTVTSPRPIPARPR---PRTSASRPGP 478
D + RP PARP P+ S SR P
Sbjct: 560 -------DMARRTKRPAPARPTMPPPQVSGSRSSP 587
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 48.5 bits (114), Expect = 1e-05
Identities = 104/405 (25%), Positives = 139/405 (34%), Gaps = 76/405 (18%)
Query: 119 YPRPTAGWRRHHSTGQPGA-PVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRP 177
YP P A HS G P A P L S + G+ H G GPS L G GEA P
Sbjct: 514 YPGPAA-----HSQGLPTASPSL--SYSTGHSPALSGHGGGWGPSSL----GGGGEAS-P 561
Query: 178 RNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAG 237
+ L+ P G PG S GK ++ V + F +P G + AG
Sbjct: 562 SHIIRPLQSPPATGRPPGVGSPGAPGKYLSS-----VLASAPFLAP---PGAGSYAAGAG 613
Query: 238 SLTALRPNPDLVTVPLTAHPPV-----------HPPLRSGPPLGAGSRPRALCPAQTPSQ 286
+L+ P PP H PP +G+ L +
Sbjct: 614 GYKGKGDGSELLAGP--GGPPAERTEDEEFLIQHLLQAPSPPRTSGAD--GLVGEDGAAD 669
Query: 287 ASSSGGGRGTSGAGEGHQHLLIT-----YRVLSNLRRTLC-SGGGVASMRISVGRGLRAG 340
AS GG G +G G + L Y + S +R + G A++ + +GR L+
Sbjct: 670 ASKGLGGSGGAGGPPGTPYELAKEDPQRYHLQSVIRTSASLDEGATAALELGLGR-LKEK 728
Query: 341 PRAPDAGS-----------FWDPNPQTLAPHPQASRRPRAGCSLSLQP-PHQRGLRDGCP 388
+ P+ G + + L Q S P + S QP PH L G P
Sbjct: 729 KKGPERGGETPEGLATSVVHYGAGAKELGAFLQKSPPPPPPTAQSTQPTPHGLLLEAGGP 788
Query: 389 SAAGRLSPA-----------LPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRP 437
L P P+PSP +G H+ +R P P P P P
Sbjct: 789 DLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPP----PPPPPPPP 844
Query: 438 LGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHL 482
PL+ A +S G P R RP S PG L
Sbjct: 845 PMPLQLEAHLRSHG------LEPAAPSPRLRPEESLDPPGAMQEL 883
Score = 38.5 bits (88), Expect = 0.014
Identities = 108/443 (24%), Positives = 146/443 (32%), Gaps = 85/443 (19%)
Query: 112 AARAAARYPRP-TAGWRRHHSTGQPGAPVLGG--SGTAGNGGQRVSH---RGICGPSPL- 164
AA A R P P + + S G P A G SG G GGQ S +G+ GP
Sbjct: 399 AAGGATRPPPPRSTATPKCQSLGGPAAAYATGKASGAGGAGGQAYSPGQPQGLLGPQAYG 458
Query: 165 QRLGGS-----------TGEAPRP------------RNREAHLRRKPRVGLEPGPHSSLP 201
Q GG +G P+P ++ + G++ P+ P
Sbjct: 459 QGFGGGQAQDLSKAPSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQGEPYPG-P 517
Query: 202 GGKQETAPPPQPVRTTQTFFSPLFS--------SKLGIHGDRAGSLTALRPNPDLVTVPL 253
+ P P + T SP S S LG G+ + S +RP L + P
Sbjct: 518 AAHSQGLPTASPSLSYSTGHSPALSGHGGGWGPSSLGGGGEASPS-HIIRP---LQSPPA 573
Query: 254 TAHPP-VHPPLRSGPPLGA--GSRPRALCPAQTPSQASSSGGGRGTSG-----AGEGH-- 303
T PP V P G L + S P L P S A+ +GG +G AG G
Sbjct: 574 TGRPPGVGSPGAPGKYLSSVLASAP-FLAPPGAGSYAAGAGGYKGKGDGSELLAGPGGPP 632
Query: 304 -----------QHLLITYRVLSNLRRTLCSG--GGVASMRISVGRGLRAGPRAPDAGSFW 350
QHLL + S R + G G + S G G G P +
Sbjct: 633 AERTEDEEFLIQHLL---QAPSPPRTSGADGLVGEDGAADASKGLGGSGGAGGPPGTPYE 689
Query: 351 DPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGL-----RDGCPSAAGRLSPALPAPSPRE 405
H Q+ R A + GL + P G L
Sbjct: 690 LAKEDPQRYHLQSVIRTSASLDEGATAALELGLGRLKEKKKGPERGGETPEGLATSVVHY 749
Query: 406 VTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPA 465
+ A + + P PP P ++ P P G L +G PD + P P P
Sbjct: 750 GAGAKELGAFLQKSPPPPPPTA---QSTQPTPHGLLL------EAGGPDLPLVLPPP-PP 799
Query: 466 RPRPRTSASRPGPSPHLEATGTH 488
+ P + P PSP G H
Sbjct: 800 QLLPSVLSHAPSPSPSASKVGVH 822
Score = 38.5 bits (88), Expect = 0.014
Identities = 41/163 (25%), Positives = 54/163 (33%), Gaps = 25/163 (15%)
Query: 341 PRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSP---- 396
P P G P PHP S G +L+ GL GCPS RL
Sbjct: 1315 PSVPARGLQPQPPATPAVPHPPPSGA--FGLGGALEAAESEGLGLGCPSPCKRLDEELKR 1372
Query: 397 ---ALPAPSPREVT-------LGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAG 446
LP+ S E L + + +S PP + +T PL P G
Sbjct: 1373 NLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPLAGPKDTSTPDGPPLAPAAAVPG 1432
Query: 447 ---------GQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 480
S+G P+ + +P P P T +P P P
Sbjct: 1433 PPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPP 1475
Score = 33.9 bits (76), Expect = 0.35
Identities = 28/115 (24%), Positives = 40/115 (34%), Gaps = 8/115 (6%)
Query: 374 SLQPPHQRGLRDGCPSAAGRLSPALPAPSPREV-------TLGSHVPARVSRRPCPPTPA 426
+L P G +D L+PA P P + + G+ P + +P P P
Sbjct: 1404 ALDDPPLAGPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPP 1463
Query: 427 ELNPATSSPRPLGPLRPRAGGQSS-GHPDRTVTSPRPIPARPRPRTSASRPGPSP 480
P P P P +P P + P P+P P P + P P P
Sbjct: 1464 APTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPP 1518
Score = 33.5 bits (75), Expect = 0.46
Identities = 78/316 (24%), Positives = 108/316 (34%), Gaps = 55/316 (17%)
Query: 195 GPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLT 254
GP + P PPP P R T F+ L SS A + A + +P L
Sbjct: 220 GPAQTPPYRPGPPDPPPPP-RHLPTQFNLLASSS-------AAAAAAEQSSPQLYNFSGA 271
Query: 255 AHPPVHPPLRSGPP----LGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLI-- 308
A P PP R+ P + RP + P P A + QH L
Sbjct: 272 APGPP-PPERALPRQDTVIKHYQRPASAQPPPPPPPAHAL-------------QHYLSCG 317
Query: 309 -TYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRP 367
+Y + + CS G G +AGP AG+ A P+A+
Sbjct: 318 GSYPSMGHRANLACSPLGGGEPSPGAGEPSKAGPSGATAGA------SGRATGPEAAGGG 371
Query: 368 RAGCSLS-----LQPPHQRGLRDGCPSAAG---RLSPALPAPSPREVTLGSHVPARVSRR 419
AG +Q P + + G +AAG R P +P+ +LG A + +
Sbjct: 372 GAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRSTATPKCQSLGGPAAAYATGK 431
Query: 420 PCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPS 479
A A S +P G L P+A GQ G S P + P+ + P P
Sbjct: 432 ASGAGGAG-GQAYSPGQPQGLLGPQAYGQGFGGGQAQDLSKAPSYSGGPPQPPSGPPPP- 489
Query: 480 PHLEATGTHAGSGTCQ 495
G TCQ
Sbjct: 490 ----------GLATCQ 495
Score = 29.3 bits (64), Expect = 8.7
Identities = 58/243 (23%), Positives = 77/243 (31%), Gaps = 27/243 (11%)
Query: 245 NPDLVTVPLTAHPPVHPPLRSGPPLGA-GSRPRA----LCPAQTPSQASSSGGG-RGTSG 298
+P L LT PP+ PP P + A G +P+ P PS A GG
Sbjct: 1295 HPPLYQAGLT--PPLSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGALEAAES 1352
Query: 299 AGEGHQHLLITYRVLSNLRRTLCSGGGVAS-----------MRISVGRGLRAGPRAPDAG 347
G G R+ L+R L + +S ++ S+ + A P AG
Sbjct: 1353 EGLGLGCPSPCKRLDEELKRNLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPLAG 1412
Query: 348 --SFWDPNPQTLAPH------PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALP 399
P+ LAP P P A + + +PP P A P P
Sbjct: 1413 PKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPP 1472
Query: 400 APSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTS 459
P P P V+ P P P L P P P P P +
Sbjct: 1473 PPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAA 1532
Query: 460 PRP 462
P P
Sbjct: 1533 PSP 1535
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 47.8 bits (112), Expect = 2e-05
Identities = 71/256 (27%), Positives = 88/256 (34%), Gaps = 47/256 (18%)
Query: 114 RAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRV--SHRGICGPSPLQRL---- 167
R + R P+P A + G GG G AG GG V + G C Q
Sbjct: 21 RGSQRVPQPPA------ARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74
Query: 168 ---GG----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 220
GG S+G P A R R S G + A P P R + F
Sbjct: 75 RGEGGDLQVSSGPGAAP---PAEFRASAR---------SAQGSRDVPAGPGFPPRLPRPF 122
Query: 221 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 280
S FS++ + A +L A R P A P P GP GA R R
Sbjct: 123 TSASFSNQTRLRRRSASALPAPR------LCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
Query: 281 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 340
A + ++GGGR S G L + L R G MR +G G R
Sbjct: 177 AAALAARQAAGGGRSRSAFVAGRDAAL----ACAQLPRRPRGAGARRGMRRRLGAGERPA 232
Query: 341 ------PRAPDAGSFW 350
PRAP G+ W
Sbjct: 233 PRPRGPPRAPARGARW 248
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 47.8 bits (112), Expect = 2e-05
Identities = 71/256 (27%), Positives = 88/256 (34%), Gaps = 47/256 (18%)
Query: 114 RAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRV--SHRGICGPSPLQRL---- 167
R + R P+P A + G GG G AG GG V + G C Q
Sbjct: 21 RGSQRVPQPPA------ARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74
Query: 168 ---GG----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 220
GG S+G P A R R S G + A P P R + F
Sbjct: 75 RGEGGDLQVSSGPGAAP---PAEFRASAR---------SAQGSRDVPAGPGFPPRLPRPF 122
Query: 221 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 280
S FS++ + A +L A R P A P P GP GA R R
Sbjct: 123 TSASFSNQTRLRRRSASALPAPR------LCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
Query: 281 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 340
A + ++GGGR S G L + L R G MR +G G R
Sbjct: 177 AAALAARQAAGGGRSRSAFVAGRDAAL----ACAQLPRRPRGAGARRGMRRRLGAGERPA 232
Query: 341 ------PRAPDAGSFW 350
PRAP G+ W
Sbjct: 233 PRPRGPPRAPARGARW 248
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 47.8 bits (112), Expect = 2e-05
Identities = 75/322 (23%), Positives = 108/322 (33%), Gaps = 68/322 (21%)
Query: 177 PRNREAHLRRKPRVGLEPGPHSSL--PGGKQETAPPPQPVRTTQTF--------FSPLFS 226
PR EA P V G H+ + P + APP P Q + P
Sbjct: 176 PRQPEASFEPHPSV-TPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMG 234
Query: 227 SKLGIHGDRAGSLTALRPNPDLVTVPLTAH-------PPVHPPLRSGPPLGAGSRPRALC 279
K G G + +P T P++ PP PP P+G G+ P A
Sbjct: 235 PKGGGAASSVGGPNGGKQHPP-PTTPISVSSSGASGAPPTKPPTT---PVGGGNLPSAPP 290
Query: 280 PAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRI-------- 331
PA P + L L L S G+ + +
Sbjct: 291 PANFPHVTPN-----------------LPPPPALRPLNNASASPPGLGAQPLPGHLPSPH 333
Query: 332 SVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAA 391
++G+G+ P P+ G P+P +L P ++ P S S++
Sbjct: 334 AMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSS 393
Query: 392 GRLSP-----ALPA-----PSPREVTLGSHVP----------ARVSRRPCPPTPAELNPA 431
SP ALP+ P P +++ + P A S+ P PP P A
Sbjct: 394 SSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLA 453
Query: 432 TSSPRPLGPLRPRAGGQSSGHP 453
S+ P GP P G QS+ HP
Sbjct: 454 NSNAHP-GPFPPSTGAQSTAHP 474
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 47.8 bits (112), Expect = 2e-05
Identities = 75/322 (23%), Positives = 108/322 (33%), Gaps = 68/322 (21%)
Query: 177 PRNREAHLRRKPRVGLEPGPHSSL--PGGKQETAPPPQPVRTTQTF--------FSPLFS 226
PR EA P V G H+ + P + APP P Q + P
Sbjct: 176 PRQPEASFEPHPSV-TPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMG 234
Query: 227 SKLGIHGDRAGSLTALRPNPDLVTVPLTAH-------PPVHPPLRSGPPLGAGSRPRALC 279
K G G + +P T P++ PP PP P+G G+ P A
Sbjct: 235 PKGGGAASSVGGPNGGKQHPP-PTTPISVSSSGASGAPPTKPPTT---PVGGGNLPSAPP 290
Query: 280 PAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRI-------- 331
PA P + L L L S G+ + +
Sbjct: 291 PANFPHVTPN-----------------LPPPPALRPLNNASASPPGLGAQPLPGHLPSPH 333
Query: 332 SVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAA 391
++G+G+ P P+ G P+P +L P ++ P S S++
Sbjct: 334 AMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSS 393
Query: 392 GRLSP-----ALPA-----PSPREVTLGSHVP----------ARVSRRPCPPTPAELNPA 431
SP ALP+ P P +++ + P A S+ P PP P A
Sbjct: 394 SSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLA 453
Query: 432 TSSPRPLGPLRPRAGGQSSGHP 453
S+ P GP P G QS+ HP
Sbjct: 454 NSNAHP-GPFPPSTGAQSTAHP 474
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,827,246
Number of Sequences: 37866
Number of extensions: 2097730
Number of successful extensions: 14933
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 1317
Number of HSP's that attempted gapping in prelim test: 10495
Number of HSP's gapped (non-prelim): 4808
length of query: 499
length of database: 18,247,518
effective HSP length: 106
effective length of query: 393
effective length of database: 14,233,722
effective search space: 5593852746
effective search space used: 5593852746
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.