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Search of human proteins with 239750002
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo
sapiens]
(505 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo ... 1018 0.0
gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo ... 921 0.0
gi|239755530 PREDICTED: similar to hCG2036644 [Homo sapiens] 645 0.0
gi|239755532 PREDICTED: similar to hCG1990723 [Homo sapiens] 380 e-105
gi|71061468 centromere protein E [Homo sapiens] 35 0.21
gi|7661858 Rho GTPase activating protein 11A isoform 1 [Homo sap... 34 0.36
gi|13027602 DDRGK domain containing 1 [Homo sapiens] 33 0.79
gi|189217904 RPGRIP1-like isoform b [Homo sapiens] 32 1.0
gi|118442834 RPGRIP1-like isoform a [Homo sapiens] 32 1.0
gi|31377611 coiled-coil domain containing 148 [Homo sapiens] 32 1.4
gi|134152719 CUG triplet repeat, RNA binding protein 2 isoform 4... 32 1.4
gi|68303645 CUG triplet repeat, RNA binding protein 2 isoform 1 ... 32 1.4
gi|134152680 CUG triplet repeat, RNA binding protein 2 isoform 2... 32 1.4
gi|68303647 CUG triplet repeat, RNA binding protein 2 isoform 3 ... 32 1.4
gi|229577185 epidermal growth factor receptor pathway substrate ... 32 1.8
gi|4503593 epidermal growth factor receptor pathway substrate 15... 32 1.8
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 32 1.8
gi|217330589 transforming growth factor, beta receptor associate... 31 2.3
gi|21359865 transforming growth factor, beta receptor associated... 31 2.3
gi|22726201 inositol polyphosphate multikinase [Homo sapiens] 31 2.3
gi|34878777 ring finger protein 20 [Homo sapiens] 31 3.0
gi|91754185 hypothetical protein LOC254268 [Homo sapiens] 30 3.9
gi|4506467 radixin [Homo sapiens] 30 5.1
gi|116008447 CAP-GLY domain containing linker protein 2 isoform ... 30 5.1
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 30 5.1
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 30 5.1
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 30 5.1
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 30 5.1
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 30 5.1
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 30 5.1
>gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo
sapiens]
Length = 505
Score = 1018 bits (2633), Expect = 0.0
Identities = 505/505 (100%), Positives = 505/505 (100%)
Query: 1 MVATSNAGIASLRLNPVPLLEKCLQNSITPLRGPLWVSKGEGFSPSGAKMYIQGVLLALY 60
MVATSNAGIASLRLNPVPLLEKCLQNSITPLRGPLWVSKGEGFSPSGAKMYIQGVLLALY
Sbjct: 1 MVATSNAGIASLRLNPVPLLEKCLQNSITPLRGPLWVSKGEGFSPSGAKMYIQGVLLALY 60
Query: 61 QRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIG 120
QRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIG
Sbjct: 61 QRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIG 120
Query: 121 HLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTGEISVGISKKDL 180
HLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTGEISVGISKKDL
Sbjct: 121 HLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTGEISVGISKKDL 180
Query: 181 GSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIKNPLSLKNEQKI 240
GSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIKNPLSLKNEQKI
Sbjct: 181 GSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIKNPLSLKNEQKI 240
Query: 241 WVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGCVGKFVRDFQLI 300
WVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGCVGKFVRDFQLI
Sbjct: 241 WVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGCVGKFVRDFQLI 300
Query: 301 STVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQFVLTYLEELNA 360
STVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQFVLTYLEELNA
Sbjct: 301 STVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQFVLTYLEELNA 360
Query: 361 QVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSDTHLMPEGSLEE 420
QVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSDTHLMPEGSLEE
Sbjct: 361 QVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSDTHLMPEGSLEE 420
Query: 421 TGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGK 480
TGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGK
Sbjct: 421 TGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGK 480
Query: 481 VKDYEKLEIYGGEENVFVGIYIKEP 505
VKDYEKLEIYGGEENVFVGIYIKEP
Sbjct: 481 VKDYEKLEIYGGEENVFVGIYIKEP 505
>gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo
sapiens]
Length = 456
Score = 921 bits (2381), Expect = 0.0
Identities = 456/456 (100%), Positives = 456/456 (100%)
Query: 50 MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID 109
MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID
Sbjct: 1 MYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLID 60
Query: 110 ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG 169
ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG
Sbjct: 61 ELQTAIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTG 120
Query: 170 EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK 229
EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK
Sbjct: 121 EISVGISKKDLGSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIK 180
Query: 230 NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC 289
NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC
Sbjct: 181 NPLSLKNEQKIWVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGC 240
Query: 290 VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQ 349
VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQ
Sbjct: 241 VGKFVRDFQLISTVPVNRYLTSLKRWTWRTIFYRTRHSGDDSQKWVFGTDGCIYSKAYPQ 300
Query: 350 FVLTYLEELNAQVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSD 409
FVLTYLEELNAQVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSD
Sbjct: 301 FVLTYLEELNAQVDVTQTEYHIHHGAWTTAHQEHGRNLAEEVLQESASNLGLKQLPEPSD 360
Query: 410 THLMPEGSLEETGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWV 469
THLMPEGSLEETGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWV
Sbjct: 361 THLMPEGSLEETGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWV 420
Query: 470 KVKNLKRMEGKVKDYEKLEIYGGEENVFVGIYIKEP 505
KVKNLKRMEGKVKDYEKLEIYGGEENVFVGIYIKEP
Sbjct: 421 KVKNLKRMEGKVKDYEKLEIYGGEENVFVGIYIKEP 456
>gi|239755530 PREDICTED: similar to hCG2036644 [Homo sapiens]
Length = 336
Score = 645 bits (1665), Expect = 0.0
Identities = 324/324 (100%), Positives = 324/324 (100%)
Query: 1 MVATSNAGIASLRLNPVPLLEKCLQNSITPLRGPLWVSKGEGFSPSGAKMYIQGVLLALY 60
MVATSNAGIASLRLNPVPLLEKCLQNSITPLRGPLWVSKGEGFSPSGAKMYIQGVLLALY
Sbjct: 1 MVATSNAGIASLRLNPVPLLEKCLQNSITPLRGPLWVSKGEGFSPSGAKMYIQGVLLALY 60
Query: 61 QRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIG 120
QRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIG
Sbjct: 61 QRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIG 120
Query: 121 HLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTGEISVGISKKDL 180
HLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTGEISVGISKKDL
Sbjct: 121 HLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTGEISVGISKKDL 180
Query: 181 GSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIKNPLSLKNEQKI 240
GSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIKNPLSLKNEQKI
Sbjct: 181 GSDSPIQTDHMMERLLLKIHQRLQGSSINPPGLNYSSMRLFDENGQEIKNPLSLKNEQKI 240
Query: 241 WVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGCVGKFVRDFQLI 300
WVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGCVGKFVRDFQLI
Sbjct: 241 WVSYGRAYRSPLNLALGLTFDRVSAFARGDIMVAYKTFLDPNAVLLPGCVGKFVRDFQLI 300
Query: 301 STVPVNRYLTSLKRWTWRTIFYRT 324
STVPVNRYLTSLKRWTWRTIFYRT
Sbjct: 301 STVPVNRYLTSLKRWTWRTIFYRT 324
>gi|239755532 PREDICTED: similar to hCG1990723 [Homo sapiens]
Length = 225
Score = 380 bits (975), Expect = e-105
Identities = 182/186 (97%), Positives = 184/186 (98%)
Query: 320 IFYRTRHSGDDSQKWVFGTDGCIYSKAYPQFVLTYLEELNAQVDVTQTEYHIHHGAWTTA 379
+ +R RHSGDDSQKWVFGTDGCIYSKAYPQFVLTYLEELNAQVDVTQTEYHIHHGAWTTA
Sbjct: 40 LHFRYRHSGDDSQKWVFGTDGCIYSKAYPQFVLTYLEELNAQVDVTQTEYHIHHGAWTTA 99
Query: 380 HQEHGRNLAEEVLQESASNLGLKQLPEPSDTHLMPEGSLEETGELTVALVRKLEEKHPKA 439
HQEHGRNLAEEVLQESASNLGLKQLPEPSDTHLMPEGSLEETGELTVALVRKLEEKHPKA
Sbjct: 100 HQEHGRNLAEEVLQESASNLGLKQLPEPSDTHLMPEGSLEETGELTVALVRKLEEKHPKA 159
Query: 440 SAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGKVKDYEKLEIYGGEENVFVG 499
SAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGKVKDYEKLEIYGGEENVFVG
Sbjct: 160 SAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGKVKDYEKLEIYGGEENVFVG 219
Query: 500 IYIKEP 505
IYIKEP
Sbjct: 220 IYIKEP 225
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 34.7 bits (78), Expect = 0.21
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 57 LALYQRLKSAKKYYKQLNLVMNEQKEKITEKVI-LSMTAKEHHKEQEEVSRLIDELQ 112
L + Q LK+A+ K+ +++ +EKI+EK I +S K+ K ++E+ + I ELQ
Sbjct: 1920 LEIQQELKTARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQ 1976
>gi|7661858 Rho GTPase activating protein 11A isoform 1 [Homo
sapiens]
Length = 1023
Score = 33.9 bits (76), Expect = 0.36
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 20/108 (18%)
Query: 379 AHQEHGRNLAEEV--LQESASNLGLKQLPEPSDTHLMPEGSLEETGELTVALVRKLEEKH 436
A E G NL + Q S +N+G +L EPS PE +L ET +LT+ ++ E H
Sbjct: 602 AFSESGSNLHALMNQRQSSVTNVGKVKLTEPSYLEDSPEENLFETNDLTIVESKEKYEHH 661
Query: 437 PKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGKVKDY 484
GKG + +S R ++ + R E +K Y
Sbjct: 662 -----------------TGKGEKCFSERDFSPLQTQTFNR-ETTIKCY 691
>gi|13027602 DDRGK domain containing 1 [Homo sapiens]
Length = 314
Score = 32.7 bits (73), Expect = 0.79
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 406 EPSDTHLMPEGSLEETGELTVALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRK 465
+P++THL +G++ +RKLEEK + AQR +R + +R S+R+
Sbjct: 107 KPAETHL--------SGKIGAKKLRKLEEKQAR-KAQREAEEA----EREERKRLESQRE 153
Query: 466 LPWVKVKNLKRMEGKVKDYEK 486
W K + R+E + K+ E+
Sbjct: 154 AEWKKEEERLRLEEEQKEEEE 174
>gi|189217904 RPGRIP1-like isoform b [Homo sapiens]
Length = 1235
Score = 32.3 bits (72), Expect = 1.0
Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 13/129 (10%)
Query: 76 VMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIGHLCKLGPQLQAEQEQ 135
++ E +K+ + + ++ +++++ I +L+TA+KS++ ++ +L+ E++Q
Sbjct: 357 LLKENYDKLYDSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTERDQ 416
Query: 136 FSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTGEISVGISKKDLGSDSPIQTDHMMERL 195
V ++ + LQL+ E + E+ I K ++ I D + E L
Sbjct: 417 NEKLVQENRE-----------LQLQYLEQKQQLDELKKRI--KLYNQENDINADELSEAL 463
Query: 196 LLKIHQRLQ 204
LL Q+ Q
Sbjct: 464 LLIKAQKEQ 472
>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
Length = 1315
Score = 32.3 bits (72), Expect = 1.0
Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 13/129 (10%)
Query: 76 VMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIGHLCKLGPQLQAEQEQ 135
++ E +K+ + + ++ +++++ I +L+TA+KS++ ++ +L+ E++Q
Sbjct: 357 LLKENYDKLYDSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTERDQ 416
Query: 136 FSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTGEISVGISKKDLGSDSPIQTDHMMERL 195
V ++ + LQL+ E + E+ I K ++ I D + E L
Sbjct: 417 NEKLVQENRE-----------LQLQYLEQKQQLDELKKRI--KLYNQENDINADELSEAL 463
Query: 196 LLKIHQRLQ 204
LL Q+ Q
Sbjct: 464 LLIKAQKEQ 472
>gi|31377611 coiled-coil domain containing 148 [Homo sapiens]
Length = 591
Score = 32.0 bits (71), Expect = 1.4
Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 419 EETGELTVAL-VRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPW--VKVKNLK 475
EE L + + R+ E++ K + K + ++ K ++YW+++K W +++++L+
Sbjct: 379 EEVARLEMEISARRREKEEEKEKLWKKKELLQRAEKKKKIKKYWAKKKQKWQEMEMRDLQ 438
Query: 476 RME 478
R+E
Sbjct: 439 RLE 441
>gi|134152719 CUG triplet repeat, RNA binding protein 2 isoform 4
[Homo sapiens]
Length = 488
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 31 LRGPLWVSKGEGFSPSGAKMYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVIL 90
LRGP +S+G F + Q + A++Q + M I K
Sbjct: 140 LRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQ------------SQTMEGCSSPIVVKFAD 187
Query: 91 SMTAKEHHKEQEEVSRLIDELQTAIKSNIGHLCKLGPQLQAEQEQFSS 138
+ KE + Q+++++ + +L TA N+ L L PQ A +Q +S
Sbjct: 188 TQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATS 235
>gi|68303645 CUG triplet repeat, RNA binding protein 2 isoform 1
[Homo sapiens]
Length = 490
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 31 LRGPLWVSKGEGFSPSGAKMYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVIL 90
LRGP +S+G F + Q + A++Q + M I K
Sbjct: 140 LRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQ------------SQTMEGCSSPIVVKFAD 187
Query: 91 SMTAKEHHKEQEEVSRLIDELQTAIKSNIGHLCKLGPQLQAEQEQFSS 138
+ KE + Q+++++ + +L TA N+ L L PQ A +Q +S
Sbjct: 188 TQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATS 235
>gi|134152680 CUG triplet repeat, RNA binding protein 2 isoform 2
[Homo sapiens]
Length = 521
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 31 LRGPLWVSKGEGFSPSGAKMYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVIL 90
LRGP +S+G F + Q + A++Q + M I K
Sbjct: 171 LRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQ------------SQTMEGCSSPIVVKFAD 218
Query: 91 SMTAKEHHKEQEEVSRLIDELQTAIKSNIGHLCKLGPQLQAEQEQFSS 138
+ KE + Q+++++ + +L TA N+ L L PQ A +Q +S
Sbjct: 219 TQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATS 266
>gi|68303647 CUG triplet repeat, RNA binding protein 2 isoform 3
[Homo sapiens]
Length = 508
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 31 LRGPLWVSKGEGFSPSGAKMYIQGVLLALYQRLKSAKKYYKQLNLVMNEQKEKITEKVIL 90
LRGP +S+G F + Q + A++Q + M I K
Sbjct: 164 LRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQ------------SQTMEGCSSPIVVKFAD 211
Query: 91 SMTAKEHHKEQEEVSRLIDELQTAIKSNIGHLCKLGPQLQAEQEQFSS 138
+ KE + Q+++++ + +L TA N+ L L PQ A +Q +S
Sbjct: 212 TQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATS 259
>gi|229577185 epidermal growth factor receptor pathway substrate 15
isoform B [Homo sapiens]
Length = 582
Score = 31.6 bits (70), Expect = 1.8
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 59 LYQRLKSA-KKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRL---IDELQTA 114
L ++LK KK ++ L+ + + E +++ +S +E K +EE+SRL EL+ +
Sbjct: 94 LEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYEEELAKAREELSRLQQETAELEES 153
Query: 115 IKSNIGHLCKLGPQLQAEQEQFSS 138
++S L L LQ Q++ SS
Sbjct: 154 VESGKAQLEPLQQHLQDSQQEISS 177
>gi|4503593 epidermal growth factor receptor pathway substrate 15
isoform A [Homo sapiens]
Length = 896
Score = 31.6 bits (70), Expect = 1.8
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 59 LYQRLKSA-KKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRL---IDELQTA 114
L ++LK KK ++ L+ + + E +++ +S +E K +EE+SRL EL+ +
Sbjct: 408 LEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYEEELAKAREELSRLQQETAELEES 467
Query: 115 IKSNIGHLCKLGPQLQAEQEQFSS 138
++S L L LQ Q++ SS
Sbjct: 468 VESGKAQLEPLQQHLQDSQQEISS 491
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 31.6 bits (70), Expect = 1.8
Identities = 13/57 (22%), Positives = 28/57 (49%)
Query: 430 RKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKNLKRMEGKVKDYEK 486
+KL E+ + Q K + + R + + W + + W + K ++ E K++D E+
Sbjct: 303 KKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEE 359
>gi|217330589 transforming growth factor, beta receptor associated
protein 1 [Homo sapiens]
Length = 860
Score = 31.2 bits (69), Expect = 2.3
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 324 TRHSGDDSQKWVFGTDGCIYS-KAYPQFVLTYLEELNAQVDVTQTEYHIH 372
T+ D+ QK F D I K YP+ ++ YLE L + + EYH H
Sbjct: 562 TKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTH 611
>gi|21359865 transforming growth factor, beta receptor associated
protein 1 [Homo sapiens]
Length = 860
Score = 31.2 bits (69), Expect = 2.3
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 324 TRHSGDDSQKWVFGTDGCIYS-KAYPQFVLTYLEELNAQVDVTQTEYHIH 372
T+ D+ QK F D I K YP+ ++ YLE L + + EYH H
Sbjct: 562 TKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTH 611
>gi|22726201 inositol polyphosphate multikinase [Homo sapiens]
Length = 416
Score = 31.2 bits (69), Expect = 2.3
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 369 YHIHHGAWTTAHQEHGRNLAEEVLQESAS 397
YH+H ++ T +Q +GR+L +E +++ S
Sbjct: 184 YHVHSDSYETENQHYGRSLTKETIKDGVS 212
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 30.8 bits (68), Expect = 3.0
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 62 RLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIG 120
+L S + Q++ ++ E+KE++ ++V+ T K Q +V R ++E + ++SNIG
Sbjct: 762 KLMSERIKSNQIHKLLKEEKEELADQVL---TLKTQVDAQLQVVRKLEEKEHLLQSNIG 817
>gi|91754185 hypothetical protein LOC254268 [Homo sapiens]
Length = 836
Score = 30.4 bits (67), Expect = 3.9
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 79 EQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNIGHLCKLGPQLQAEQEQFSS 138
EQK KITE + E + + EL T I+S L KL P Q SS
Sbjct: 318 EQKGKITEP--------SQQIQMEPIVHIHQELLTGIESEAS-LSKLSPTSQKGTSSSSS 368
Query: 139 YVYQHI 144
Y++Q I
Sbjct: 369 YIFQKI 374
>gi|4506467 radixin [Homo sapiens]
Length = 583
Score = 30.0 bits (66), Expect = 5.1
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 59 LYQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSN 118
L +RLK ++ + + EQ K E AKE + E+ R +E ++AI
Sbjct: 347 LMERLKQIEEQTIKAQKELEEQTRKALELDQERKRAKEEAERLEKERRAAEEAKSAIAKQ 406
Query: 119 IGHLCKLGPQLQAEQEQFSSYV 140
K QL AE +F++ +
Sbjct: 407 AADQMKNQEQLAAELAEFTAKI 428
>gi|116008447 CAP-GLY domain containing linker protein 2 isoform 1
[Homo sapiens]
Length = 1046
Score = 30.0 bits (66), Expect = 5.1
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 56 LLALYQRLKSAKKYYKQLNLVMNEQKEKITE--KVILSMTAKEHHKEQEEVSRLIDELQT 113
+L L +RL SA K +++ + V+ ++ EK + + + + K +EV+ L D++Q
Sbjct: 542 ILRLRERLLSASKEHQRESGVLRDKYEKALKAYQAEVDKLRAANEKYAQEVAGLKDKVQQ 601
Query: 114 AIKSNIGHLCKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLK-------VFENGK 166
A N+G L +++ + +S + ++ L A G Q K V E K
Sbjct: 602 ATSENMG----LMDNWKSKLDSLASDHQKSLEDLKATLNSGPGAQQKEIGELKAVMEGIK 657
Query: 167 NTGEISVG--ISKKDLGSDSPIQTDHMMERLLLKIHQRLQG 205
++ +G +K DL + ++ + L + + L G
Sbjct: 658 MEHQLELGNLQAKHDLETAMHVKEKEALREKLQEAQEELAG 698
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 30.0 bits (66), Expect = 5.1
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 60 YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 119
Y++L+S+ + +++++ ++ KE + EK + + E +V R + +QT +KS
Sbjct: 792 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 849
Query: 120 GHLCKLGPQLQAEQEQFS 137
+ +L + Q QE+ +
Sbjct: 850 QEVNELLQKFQQAQEELA 867
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 30.0 bits (66), Expect = 5.1
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 60 YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 119
Y++L+S+ + +++++ ++ KE + EK + + E +V R + +QT +KS
Sbjct: 781 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 838
Query: 120 GHLCKLGPQLQAEQEQFS 137
+ +L + Q QE+ +
Sbjct: 839 QEVNELLQKFQQAQEELA 856
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 30.0 bits (66), Expect = 5.1
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 60 YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 119
Y++L+S+ + +++++ ++ KE + EK + + E +V R + +QT +KS
Sbjct: 760 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 817
Query: 120 GHLCKLGPQLQAEQEQFS 137
+ +L + Q QE+ +
Sbjct: 818 QEVNELLQKFQQAQEELA 835
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 30.0 bits (66), Expect = 5.1
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 60 YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 119
Y++L+S+ + +++++ ++ KE + EK + + E +V R + +QT +KS
Sbjct: 789 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 846
Query: 120 GHLCKLGPQLQAEQEQFS 137
+ +L + Q QE+ +
Sbjct: 847 QEVNELLQKFQQAQEELA 864
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 30.0 bits (66), Expect = 5.1
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 60 YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 119
Y++L+S+ + +++++ ++ KE + EK + + E +V R + +QT +KS
Sbjct: 789 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 846
Query: 120 GHLCKLGPQLQAEQEQFS 137
+ +L + Q QE+ +
Sbjct: 847 QEVNELLQKFQQAQEELA 864
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 30.0 bits (66), Expect = 5.1
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 60 YQRLKSAKKYYKQLNLVMNEQKEKITEKVILSMTAKEHHKEQEEVSRLIDELQTAIKSNI 119
Y++L+S+ + +++++ ++ KE + EK + + E +V R + +QT +KS
Sbjct: 789 YEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKE 846
Query: 120 GHLCKLGPQLQAEQEQFS 137
+ +L + Q QE+ +
Sbjct: 847 QEVNELLQKFQQAQEELA 864
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,770,584
Number of Sequences: 37866
Number of extensions: 913762
Number of successful extensions: 3079
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 3042
Number of HSP's gapped (non-prelim): 78
length of query: 505
length of database: 18,247,518
effective HSP length: 107
effective length of query: 398
effective length of database: 14,195,856
effective search space: 5649950688
effective search space used: 5649950688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.