BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239749957 PREDICTED: hypothetical protein [Homo sapiens] (707 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239749957 PREDICTED: hypothetical protein [Homo sapiens] 1476 0.0 gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens] 46 1e-04 gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens] 46 1e-04 gi|239744727 PREDICTED: hypothetical protein XP_002343254 [Homo ... 45 3e-04 gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 45 3e-04 gi|134142824 forkhead box D2 [Homo sapiens] 44 5e-04 gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 42 0.002 gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 42 0.002 gi|153792074 proline rich 12 [Homo sapiens] 42 0.002 gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.006 gi|7662302 TBK1 binding protein 1 [Homo sapiens] 40 0.006 gi|47132519 Ras association and pleckstrin homology domains 1 is... 40 0.006 gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 40 0.010 gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 40 0.010 gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 40 0.010 gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 40 0.010 gi|239751831 PREDICTED: hypothetical protein XP_002348009 [Homo ... 39 0.013 gi|239746324 PREDICTED: hypothetical protein XP_002343730 [Homo ... 39 0.013 gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 39 0.013 gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens] 39 0.013 gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens] 39 0.013 gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 39 0.017 gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 39 0.017 gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens] 39 0.022 gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 38 0.028 gi|82534351 microtubule-associated protein tau isoform 1 [Homo s... 38 0.037 gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 38 0.037 gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 38 0.037 gi|71043876 undifferentiated embryonic cell transcription factor... 38 0.037 gi|122692281 hypothetical protein LOC645369 [Homo sapiens] 38 0.037 >gi|239749957 PREDICTED: hypothetical protein [Homo sapiens] Length = 707 Score = 1476 bits (3821), Expect = 0.0 Identities = 707/707 (100%), Positives = 707/707 (100%) Query: 1 MGAWRATETSPPVRPPGLAACCRPVQEVLVGGAVAGLLYLGLGDALEMPLSFSPEAIAPP 60 MGAWRATETSPPVRPPGLAACCRPVQEVLVGGAVAGLLYLGLGDALEMPLSFSPEAIAPP Sbjct: 1 MGAWRATETSPPVRPPGLAACCRPVQEVLVGGAVAGLLYLGLGDALEMPLSFSPEAIAPP 60 Query: 61 APRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEGQAGTGQR 120 APRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEGQAGTGQR Sbjct: 61 APRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEGQAGTGQR 120 Query: 121 PQGLAESGEEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQWQEKAFIAVVLQGGLGKCLGS 180 PQGLAESGEEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQWQEKAFIAVVLQGGLGKCLGS Sbjct: 121 PQGLAESGEEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQWQEKAFIAVVLQGGLGKCLGS 180 Query: 181 AGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLGNGPPGVGQHVCPVLQGLPR 240 AGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLGNGPPGVGQHVCPVLQGLPR Sbjct: 181 AGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLGNGPPGVGQHVCPVLQGLPR 240 Query: 241 GPGTQVHLAYGLSSERQAAVPDSQHQVHILCRDRPEHELDLHVGLWEGKVAEGASQGSGL 300 GPGTQVHLAYGLSSERQAAVPDSQHQVHILCRDRPEHELDLHVGLWEGKVAEGASQGSGL Sbjct: 241 GPGTQVHLAYGLSSERQAAVPDSQHQVHILCRDRPEHELDLHVGLWEGKVAEGASQGSGL 300 Query: 301 STGPPSVQQPPHLSGSRRAQQVPVLQNMLQIHGAQWQTELTQGLMPREALEVEKLHLQGG 360 STGPPSVQQPPHLSGSRRAQQVPVLQNMLQIHGAQWQTELTQGLMPREALEVEKLHLQGG Sbjct: 301 STGPPSVQQPPHLSGSRRAQQVPVLQNMLQIHGAQWQTELTQGLMPREALEVEKLHLQGG 360 Query: 361 PWQLRLRDLRQRPGLVKHGAERASVHFCLMSVSGLGGDADPGIGVHGAPRPQVGCLPQAH 420 PWQLRLRDLRQRPGLVKHGAERASVHFCLMSVSGLGGDADPGIGVHGAPRPQVGCLPQAH Sbjct: 361 PWQLRLRDLRQRPGLVKHGAERASVHFCLMSVSGLGGDADPGIGVHGAPRPQVGCLPQAH 420 Query: 421 PDLGASGVGSAKGPCPVSSPPPRAWGLPFPRHPFRKLAEPLVLRSGALHLLASKVELQGE 480 PDLGASGVGSAKGPCPVSSPPPRAWGLPFPRHPFRKLAEPLVLRSGALHLLASKVELQGE Sbjct: 421 PDLGASGVGSAKGPCPVSSPPPRAWGLPFPRHPFRKLAEPLVLRSGALHLLASKVELQGE 480 Query: 481 LQAPPLLSIPRAGLQAIHIRLHLEWVVVVPRALPRPTDSLSLGFFLWRRQQQQAAQRRQE 540 LQAPPLLSIPRAGLQAIHIRLHLEWVVVVPRALPRPTDSLSLGFFLWRRQQQQAAQRRQE Sbjct: 481 LQAPPLLSIPRAGLQAIHIRLHLEWVVVVPRALPRPTDSLSLGFFLWRRQQQQAAQRRQE 540 Query: 541 TRRTPAARAPAMRAQRGPGGVPATRSGISPGIAVVPAGAGALGETGGCPIFLPCWMRPPP 600 TRRTPAARAPAMRAQRGPGGVPATRSGISPGIAVVPAGAGALGETGGCPIFLPCWMRPPP Sbjct: 541 TRRTPAARAPAMRAQRGPGGVPATRSGISPGIAVVPAGAGALGETGGCPIFLPCWMRPPP 600 Query: 601 GSSLPPCFSLLGPGPWALPGGPISSLGVSSLRSHHFLASTPGRTTAGAHHGLPAMQVEHV 660 GSSLPPCFSLLGPGPWALPGGPISSLGVSSLRSHHFLASTPGRTTAGAHHGLPAMQVEHV Sbjct: 601 GSSLPPCFSLLGPGPWALPGGPISSLGVSSLRSHHFLASTPGRTTAGAHHGLPAMQVEHV 660 Query: 661 HCSPQELGSPEGSAGSWREEQGWLSAELTEQAWAKGAFLAGAQGRSA 707 HCSPQELGSPEGSAGSWREEQGWLSAELTEQAWAKGAFLAGAQGRSA Sbjct: 661 HCSPQELGSPEGSAGSWREEQGWLSAELTEQAWAKGAFLAGAQGRSA 707 >gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens] Length = 755 Score = 45.8 bits (107), Expect = 1e-04 Identities = 74/266 (27%), Positives = 100/266 (37%), Gaps = 42/266 (15%) Query: 53 SPEAIAPPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPE 112 +P+A PP P PPP G L R +P G +L S AP+GG P LP Sbjct: 60 APQADEPPLPPPPPPPGELAR--SPEAVGPELEAEEKL-SVRVAESAAAAPQGG-PELPP 115 Query: 113 GQAGTGQRPQGLAESGEEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQWQEKAFIAVVLQG 172 A ++P E E PLP+P LV G + S+L P ++ + V L Sbjct: 116 SPASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTV-SQLIPGSE------VRVTLDH 168 Query: 173 GLGKCLGSAGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLGNGPPGVGQHVC 232 + L + R + SGV ++ G H + + +P+ + P + Sbjct: 169 IIEDALVVSFRFGEKLFSGVLMDLSKR----FGPHGIPVTVFPKR-EYKDKPEAM----- 218 Query: 233 PVLQGLPRGPGTQVHLAYGLSSERQAAVPDSQHQVHILCRDRPEHELDLHVGLWEGK--- 289 LQ GT+V E AVPD V P EL L LW K Sbjct: 219 -PLQSNTFQEGTEV------KCEANGAVPDDPSPV-------PHPELSLAESLWTSKPPP 264 Query: 290 -VAEGASQGSGL---STGPPSVQQPP 311 EGA L T S+ QPP Sbjct: 265 LFHEGAPYPPPLFIRDTYNQSIPQPP 290 >gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens] Length = 560 Score = 45.8 bits (107), Expect = 1e-04 Identities = 74/266 (27%), Positives = 100/266 (37%), Gaps = 42/266 (15%) Query: 53 SPEAIAPPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPE 112 +P+A PP P PPP G L R +P G +L S AP+GG P LP Sbjct: 60 APQADEPPLPPPPPPPGELAR--SPEAVGPELEAEEKL-SVRVAESAAAAPQGG-PELPP 115 Query: 113 GQAGTGQRPQGLAESGEEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQWQEKAFIAVVLQG 172 A ++P E E PLP+P LV G + S+L P ++ + V L Sbjct: 116 SPASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTV-SQLIPGSE------VRVTLDH 168 Query: 173 GLGKCLGSAGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLGNGPPGVGQHVC 232 + L + R + SGV ++ G H + + +P+ + P + Sbjct: 169 IIEDALVVSFRFGEKLFSGVLMDLSKR----FGPHGIPVTVFPKR-EYKDKPEAM----- 218 Query: 233 PVLQGLPRGPGTQVHLAYGLSSERQAAVPDSQHQVHILCRDRPEHELDLHVGLWEGK--- 289 LQ GT+V E AVPD V P EL L LW K Sbjct: 219 -PLQSNTFQEGTEV------KCEANGAVPDDPSPV-------PHPELSLAESLWTSKPPP 264 Query: 290 -VAEGASQGSGL---STGPPSVQQPP 311 EGA L T S+ QPP Sbjct: 265 LFHEGAPYPPPLFIRDTYNQSIPQPP 290 >gi|239744727 PREDICTED: hypothetical protein XP_002343254 [Homo sapiens] Length = 567 Score = 44.7 bits (104), Expect = 3e-04 Identities = 54/228 (23%), Positives = 88/228 (38%), Gaps = 36/228 (15%) Query: 180 SAGRQRHVVHSGVGQ---GQAQAKAGLQGQHAVHLPGWPQGVPLGNGPPGVGQHVCPVLQ 236 +AG Q H+ + GQ G A+AG G+HA+H+ PQ P G V + Sbjct: 78 AAGAQLHLQWAEHGQQLQGDDGAQAGPHGRHALHILQLPQ----PQAPDGCRVDVLVLPP 133 Query: 237 GLPRGPGTQVHLAYGLSSERQAAVPDSQHQVHI--LCRDRPEHELDLHVGLWEGKVAEGA 294 R GT + L+ P ++ H +CR R LH + + Sbjct: 134 ARVRSTGTDAAVIPWLAGRASPCQPLTRAHTHATRMCRPR------LHSSTSSPVMVSCS 187 Query: 295 SQGSGLSTGPPSVQQPPHLSGSRRAQQVPVLQNMLQIHG------------AQWQTELTQ 342 LS+ P P + + + LQ +L++ G Q Q ++ Sbjct: 188 PSACSLSSRSPC----PWPGNEHQCEDIRFLQVLLRVQGLAHQRLPEGGQEVQGQRDVCP 243 Query: 343 GLMPRE-ALEVEKLHLQGGPWQLRLRDLRQRPGLVKHGAERASVHFCL 389 P++ EV++L L GP Q++ GL++ G + +H CL Sbjct: 244 NCNPQQLPQEVQQLLLPVGPGQVQALTF----GLLQQGGDAVGIHGCL 287 >gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] Length = 274 Score = 44.7 bits (104), Expect = 3e-04 Identities = 75/258 (29%), Positives = 95/258 (36%), Gaps = 52/258 (20%) Query: 15 PPGLAACCRPVQEVLVGGAVAGLLYLGLGDA-LEMPLSFSPEAIAPPAPR----PPPCRG 69 PPG A + +Q A LL G D E S + APPAP P PC Sbjct: 54 PPGGAGDHQTLQR-------ASLLPGGSADKDQEREPSLAARGTAPPAPPRQCLPTPCP- 105 Query: 70 PLDRDLAPSRSGGSWPQPC-RLRSPAARRGEICAPRGGSPPLPEGQAGTGQRPQGLAESG 128 PL L P G+ P C R +P PRG P P A TG + A+ G Sbjct: 106 PLGHGLRPRPPPGTPPPRCPRTLAPG--------PRGLFPAPPPAPARTGPAGKAAADRG 157 Query: 129 EEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQWQEKAFIAVVLQ---------GGLGKCLG 179 P P G V P F P L T+ +A+ L GG + Sbjct: 158 R---PGPAAGRRVRR-SPSF--PPFLLAQTRLGRTGPLALCLLLLLHGAMRLGGGSREKL 211 Query: 180 SAGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLGNGPPGVGQHVCPVLQGLP 239 + GR +G G+G +A+ G+ PG +G+P G GL Sbjct: 212 ACGRAGRAARTGRGEGGRRAEEEAAGRRRRRRPGRTRGIPRAAG-------------GLS 258 Query: 240 RGPGTQVHLAYGLSSERQ 257 R GT+V L Y S RQ Sbjct: 259 RA-GTRV-LRYPSSHRRQ 274 Score = 30.0 bits (66), Expect = 7.7 Identities = 31/102 (30%), Positives = 35/102 (34%), Gaps = 7/102 (6%) Query: 528 RRQQQQAAQRRQETRRTPAARAPAMRAQRG---PGGVPATRSGISPGIAV----VPAGAG 580 RR + AA RR P QR PGG P +A PA Sbjct: 38 RRAGEGAAGRRDGGWGPPGGAGDHQTLQRASLLPGGSADKDQEREPSLAARGTAPPAPPR 97 Query: 581 ALGETGGCPIFLPCWMRPPPGSSLPPCFSLLGPGPWALPGGP 622 T P+ RPPPG+ P C L PGP L P Sbjct: 98 QCLPTPCPPLGHGLRPRPPPGTPPPRCPRTLAPGPRGLFPAP 139 >gi|134142824 forkhead box D2 [Homo sapiens] Length = 495 Score = 43.9 bits (102), Expect = 5e-04 Identities = 61/224 (27%), Positives = 82/224 (36%), Gaps = 31/224 (13%) Query: 41 GLGDALEMPLSFSPEAIAPPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEI 100 G G L +P +P PP P P P P A + + PC+L P G Sbjct: 267 GYGYGLALPAYGAP----PPGPAPHPHPHPHAFAFAAAAAAA----PCQLSVPP---GRA 315 Query: 101 CAPRGGSPPLPEGQAGTGQRPQGLAESGEEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQW 160 AP G PP AG G P SG P GPGP +P+ L + Sbjct: 316 AAPPPG-PPTASVFAGAGSAPAPAPASGSGP-----------GPGP-AGLPAFLGAELGC 362 Query: 161 QEKAFIAVVLQGGLGKCLG---SAGRQRHVVHSGVGQGQAQAKAGLQGQHAV-HLPGWPQ 216 + + A + G G + RQ +G G G A AG + ++ H+ G Sbjct: 363 AKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHGG 422 Query: 217 GVPLGNGPPGVGQHVCPVLQGLPRGPGTQVHLAYGLSSERQAAV 260 G G PPG G+ GPG Q + L++ A V Sbjct: 423 G---GAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPV 463 Score = 33.9 bits (76), Expect = 0.53 Identities = 17/43 (39%), Positives = 20/43 (46%) Query: 406 HGAPRPQVGCLPQAHPDLGASGVGSAKGPCPVSSPPPRAWGLP 448 +GAP P P HP A +A PC +S PP RA P Sbjct: 277 YGAPPPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPP 319 >gi|91208418 transcription elongation regulator 1 isoform 2 [Homo sapiens] Length = 1077 Score = 42.0 bits (97), Expect = 0.002 Identities = 44/153 (28%), Positives = 59/153 (38%), Gaps = 15/153 (9%) Query: 59 PPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEGQAGTG 118 PP PRPP R P D ++ P G P P + P +R P S P P G Sbjct: 60 PPPPRPPFGRPPFDPNMPPMPPPGGIPPP--MGPPHLQRPPFMPPPMSSMPPPPGMMFPP 117 Query: 119 QRPQGLAESGEEPLPRPCQGTLVSGPGP-----YFCIPSRLQPDTQWQEKAFIAVVLQGG 173 P + G LP P + V P Y+ +R ++ W + + V+ Q Sbjct: 118 GMPP-VTAPGTPALP-PTEEIWVENKTPDGKVYYYNARTR---ESAWTKPDGVKVIQQSE 172 Query: 174 LGKCLGSAGRQRHVVHSGVGQGQAQAKAGLQGQ 206 L L + Q V Q QAQA+A Q Q Sbjct: 173 LTPMLAA---QAQVQAQAQAQAQAQAQAQAQAQ 202 >gi|21327715 transcription elongation regulator 1 isoform 1 [Homo sapiens] Length = 1098 Score = 42.0 bits (97), Expect = 0.002 Identities = 44/153 (28%), Positives = 59/153 (38%), Gaps = 15/153 (9%) Query: 59 PPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEGQAGTG 118 PP PRPP R P D ++ P G P P + P +R P S P P G Sbjct: 60 PPPPRPPFGRPPFDPNMPPMPPPGGIPPP--MGPPHLQRPPFMPPPMSSMPPPPGMMFPP 117 Query: 119 QRPQGLAESGEEPLPRPCQGTLVSGPGP-----YFCIPSRLQPDTQWQEKAFIAVVLQGG 173 P + G LP P + V P Y+ +R ++ W + + V+ Q Sbjct: 118 GMPP-VTAPGTPALP-PTEEIWVENKTPDGKVYYYNARTR---ESAWTKPDGVKVIQQSE 172 Query: 174 LGKCLGSAGRQRHVVHSGVGQGQAQAKAGLQGQ 206 L L + Q V Q QAQA+A Q Q Sbjct: 173 LTPMLAA---QAQVQAQAQAQAQAQAQAQAQAQ 202 >gi|153792074 proline rich 12 [Homo sapiens] Length = 2036 Score = 42.0 bits (97), Expect = 0.002 Identities = 60/224 (26%), Positives = 79/224 (35%), Gaps = 29/224 (12%) Query: 53 SPEAIAPPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAA--RRGEICAPRGGSPPL 110 +P+ PP P PPP L+ L + P P RLR + G + G PL Sbjct: 832 APQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSP-RLRPEESLDPPGAMQELLGALEPL 890 Query: 111 PEGQAGTGQRP---QGLAESGEEPLPRPCQGTLVSG--PGPYFCIPSRLQPDTQWQEKAF 165 P TG P +G +G P P QGT P C P L D +E++F Sbjct: 891 PPAPGDTGVGPPNSEGKDPAGAYRSPSP-QGTKAPRFVPLTSICFPDSLLQD---EERSF 946 Query: 166 IAVVLQ---GGLGKCLGSAGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLGN 222 + + GG G AG +G +A AG PG P P G Sbjct: 947 FPTMEEMFGGGAADDYGKAGPPE-------DEGDPKAGAGPP-------PGPPAYDPYGP 992 Query: 223 GPPGVGQHVCPVLQGLPRGPGTQVHLAYGLSSERQAAVPDSQHQ 266 PG P GL P L +++E + HQ Sbjct: 993 YCPGRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQ 1036 >gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens] Length = 816 Score = 40.4 bits (93), Expect = 0.006 Identities = 49/169 (28%), Positives = 61/169 (36%), Gaps = 13/169 (7%) Query: 510 PRALPRPTDSLSLGFFLWRRQQQQAAQRRQETRRTPAAR----APAMRAQRGPGGVPATR 565 P A RP+ L R A R P+AR APA +Q P G+ A R Sbjct: 213 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALR 272 Query: 566 SGISPGIAVVPA--GAGALGETGGCPIFLPCWMRPPPGSSLPPCFSLLGPGPWALPGGPI 623 P P A ALG P+ P PP S PP L P P Sbjct: 273 ----PPQVTPPRKDAAPALGPLSSSPLATPS-PSAPPSPSAPPSLQTLPSPPATPPSQAT 327 Query: 624 SSLGVSSLR-SHHFLASTP-GRTTAGAHHGLPAMQVEHVHCSPQELGSP 670 +SLG +L+ +H FL S P PA+ + + P SP Sbjct: 328 TSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASP 376 Score = 36.6 bits (83), Expect = 0.082 Identities = 144/644 (22%), Positives = 202/644 (31%), Gaps = 140/644 (21%) Query: 43 GDALEMPLSFSPEAIAPP---APRPPP-----------CRGPLDRDLAPSRSGG------ 82 G A P + +P + P +PRPPP G + R R+GG Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70 Query: 83 --SWPQ--PCRL-RSPAARRGEICAPRGGSPPLP---EGQAGTGQRP-----QGLAESGE 129 S P+ P R R PA+ RGE P + P P G+A RP +GL S E Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 130 Query: 130 EPLPR------PCQGTLVSGPGPYFCIPSRLQPDTQWQEKAFIAVVLQG----------- 172 E + R P + L +G P+ P ++ A G Sbjct: 131 ETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPR 190 Query: 173 ----GLGKCLGSAGRQRHVVHSGVGQGQAQAKAGLQ--GQHAVHLPGWPQGVPLGNGPPG 226 G K + SA S + + A GLQ ++ P P +GP Sbjct: 191 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSA 250 Query: 227 VGQHVCPVLQGLPRGPGTQVHLAYGLSSERQAAVPDSQHQVHILCRDRPEHELDLHVGLW 286 G P P+ G Q ++ R+ A P Sbjct: 251 RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP------------------------- 285 Query: 287 EGKVAEGASQGSGLST----GPPSVQQPPHLSGSRRAQQVPVLQNMLQIHGAQWQTELTQ 342 A G S L+T PPS PP L P Q + Q T Sbjct: 286 ----ALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQA--TH 339 Query: 343 GLMPREALEVEKLHLQGGPWQLRLRDLRQRPGLVKHGAERASVHFCLMSVSGLGGDADPG 402 +P L P L L L+ P + AS L ++ A Sbjct: 340 SFLPSPPLSPLATPPPQAPPALALPPLQAPP------SPPASPP--LSPLATPSPQAPNA 391 Query: 403 IGVH---------GAPRPQVGCLPQAHPDLGASGVGSAKGPCPVSSPPPRAWGLPFPRHP 453 + VH +P Q P A P + S ++ P +++PP + P P Sbjct: 392 LAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPP 451 Query: 454 FRKLAEPLVLRSGALHLLASKVEL-QGELQAPPLLSIPRAGLQAIHIRLHLEWVVVVPRA 512 A P L A ++L + QAPP L+ P +A Sbjct: 452 MSPSATP--PPQAPPPLAAPPLQLAKPPPQAPPALATPPL------------------QA 491 Query: 513 LPRPTDSLSLGFFLWRRQQQQAAQRRQETRRTPAARAPAMRAQ---RGPGGVPATRSGIS 569 LP P S F + +A TP +AP + A + P PA+ + + Sbjct: 492 LPSPPAS-----FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQA 546 Query: 570 PGIAVVPAGAGALGETGGCPIFLPCWMRPPPGSSLPPCFSLLGP 613 P P G G + L PPP S P +L GP Sbjct: 547 PRRPPTP---GPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP 587 Score = 36.2 bits (82), Expect = 0.11 Identities = 35/102 (34%), Positives = 42/102 (41%), Gaps = 18/102 (17%) Query: 543 RTPAARAPAMRAQRGPGGVPATRSGISPGIAVVPAGAGALGE---------TGGCPIFLP 593 RTPAARAP + R PG P ++P V AGA+G GG I Sbjct: 15 RTPAARAPGLLTPRPPGS-PRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPES 73 Query: 594 CWMRPPPGSSLPPCFSLLGPGPWALPG-----GPISSLGVSS 630 P +S PP G G A P GP+SS G +S Sbjct: 74 APRAGPTRTSRPPA---SGRGERAPPAKNTSPGPVSSPGRAS 112 >gi|7662302 TBK1 binding protein 1 [Homo sapiens] Length = 615 Score = 40.4 bits (93), Expect = 0.006 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Query: 53 SPEAIAPPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPE 112 SP A AP PPC+ P+ + +P P P + RSPA+ P+ SP P Sbjct: 349 SPSPPARAAPPCPPCQSPVPQRRSPVPP---CPSPQQRRSPASPSCPSPVPQRRSPVPPS 405 Query: 113 GQAGTGQRPQGLAESGEEPLPRP 135 Q+ + QR + S P PRP Sbjct: 406 CQSPSPQRRSPVPPSCPAPQPRP 428 Score = 32.7 bits (73), Expect = 1.2 Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 11/93 (11%) Query: 54 PEAIAPPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEG 113 P + P PRPPP P +R LA ++ +P A +G R L EG Sbjct: 418 PPSCPAPQPRPPPPPPPGERTLAER----AYAKPPSHHVKAGFQG-----RRSYSELAEG 468 Query: 114 QAGTGQRPQGL-AESGEEPLPRPCQGTLVSGPG 145 A G P L AE+ P PR G+ + GPG Sbjct: 469 AAYAGASPPWLQAEAATLPKPR-AYGSELYGPG 500 >gi|47132519 Ras association and pleckstrin homology domains 1 isoform 1 [Homo sapiens] Length = 1250 Score = 40.4 bits (93), Expect = 0.006 Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 10/112 (8%) Query: 49 PLSFSPEAIAPPAPRPPPCRGPLDRDLAPSRSGGS-----WPQPCRLRSPAARRGEICAP 103 PL P PP P PPP PL APS + + RL++ + G + P Sbjct: 627 PLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKP 686 Query: 104 RGGSPPLPEGQAGTGQ---RPQGLAESGEEPLPRPCQGTLVSGPGPYFCIPS 152 +PP+ + Q+ Q P G+ P P P G+ ++ P C PS Sbjct: 687 --PTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPS 736 Score = 31.2 bits (69), Expect = 3.5 Identities = 28/92 (30%), Positives = 35/92 (38%), Gaps = 24/92 (26%) Query: 54 PEAIAPPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEG 113 P + P P PPP P P +SG SP + + +P G PP Sbjct: 932 PSPVPAPPPPPPPTASP-----TPDKSG----------SPGKKTSKTSSPGGKKPP---- 972 Query: 114 QAGTGQRPQGLAES--GEEPLP-RPCQGTLVS 142 T QR + S E P P RP +LVS Sbjct: 973 --PTPQRNSSIKSSSGAEHPEPKRPSVDSLVS 1002 >gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF isoform b [Homo sapiens] Length = 7968 Score = 39.7 bits (91), Expect = 0.010 Identities = 44/149 (29%), Positives = 60/149 (40%), Gaps = 24/149 (16%) Query: 533 QAAQRRQETRRTPAARAPAMRAQRGPGGVPAT----------RSGISPGIAVVPAGAGAL 582 Q +++ T P P + P G PA + G SP AV P G+ Sbjct: 7002 QGSKQLPSTGGHPGTAQPERPSPDSPWGQPAPFCHPKQGSAPQEGCSPHPAVAPCPPGSF 7061 Query: 583 --GETGGCPI-----FLPCWMRPP-PGSSLPPCFSLLGPGPWALPG----GPISSLGVSS 630 G P+ FL PP P + PP S +GPG +LPG GP SS G +S Sbjct: 7062 PPGSCKEAPLVPSSPFLGQPQAPPAPAKASPPLDSKMGPGDISLPGRPKPGPCSSPGSAS 7121 Query: 631 LRSHHFLAS-TPGRTTAGAHHGLPAMQVE 658 S ++S G + G G P++ E Sbjct: 7122 QASSSQVSSLRVGSSQVGTEPG-PSLDAE 7149 >gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapiens] Length = 678 Score = 39.7 bits (91), Expect = 0.010 Identities = 48/147 (32%), Positives = 55/147 (37%), Gaps = 12/147 (8%) Query: 8 ETSP--PVRPPGLAACCRPVQEVLVGGAVAGLLYLGLGDALEMPLS----FSPEAIAPPA 61 ET P P PP A EVLV GA G + L + + P + SPE PP Sbjct: 40 ETVPGFPPAPPAPGAAQIRAAEVLVYGAPPGRVSRLL-ERFDPPAAPRRRGSPERARPPP 98 Query: 62 PRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGS--PPLPEG-QAGTG 118 P PPP P APS P+ SP ARR + G + P G G G Sbjct: 99 PPPPPA-PPRPPPAAPSPPAAPGPRGGG-ASPGARRSDFLQKTGSNSFTVHPRGLHRGAG 156 Query: 119 QRPQGLAESGEEPLPRPCQGTLVSGPG 145 R S EP P S PG Sbjct: 157 ARLLSNGHSAPEPRAGPANRLAGSPPG 183 Score = 32.0 bits (71), Expect = 2.0 Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 14/93 (15%) Query: 598 PPPGSSLPPCFSLLGPGPWALPGGPISSLGVSSLRSHHFLASTPGRT----TAGAHHGLP 653 PPP PP P P A P GP R FL T + G H G Sbjct: 98 PPPPPPAPPRPPPAAPSPPAAP-GPRGGGASPGARRSDFLQKTGSNSFTVHPRGLHRGAG 156 Query: 654 AMQVEHVHCSPQE--------LGSPEGSAGSWR 678 A + + H +P+ GSP GS G W+ Sbjct: 157 ARLLSNGHSAPEPRAGPANRLAGSPPGS-GQWK 188 >gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapiens] Length = 650 Score = 39.7 bits (91), Expect = 0.010 Identities = 48/147 (32%), Positives = 55/147 (37%), Gaps = 12/147 (8%) Query: 8 ETSP--PVRPPGLAACCRPVQEVLVGGAVAGLLYLGLGDALEMPLS----FSPEAIAPPA 61 ET P P PP A EVLV GA G + L + + P + SPE PP Sbjct: 40 ETVPGFPPAPPAPGAAQIRAAEVLVYGAPPGRVSRLL-ERFDPPAAPRRRGSPERARPPP 98 Query: 62 PRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGS--PPLPEG-QAGTG 118 P PPP P APS P+ SP ARR + G + P G G G Sbjct: 99 PPPPPA-PPRPPPAAPSPPAAPGPRGGG-ASPGARRSDFLQKTGSNSFTVHPRGLHRGAG 156 Query: 119 QRPQGLAESGEEPLPRPCQGTLVSGPG 145 R S EP P S PG Sbjct: 157 ARLLSNGHSAPEPRAGPANRLAGSPPG 183 Score = 32.0 bits (71), Expect = 2.0 Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 14/93 (15%) Query: 598 PPPGSSLPPCFSLLGPGPWALPGGPISSLGVSSLRSHHFLASTPGRT----TAGAHHGLP 653 PPP PP P P A P GP R FL T + G H G Sbjct: 98 PPPPPPAPPRPPPAAPSPPAAP-GPRGGGASPGARRSDFLQKTGSNSFTVHPRGLHRGAG 156 Query: 654 AMQVEHVHCSPQE--------LGSPEGSAGSWR 678 A + + H +P+ GSP GS G W+ Sbjct: 157 ARLLSNGHSAPEPRAGPANRLAGSPPGS-GQWK 188 >gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] Length = 1336 Score = 39.7 bits (91), Expect = 0.010 Identities = 114/433 (26%), Positives = 150/433 (34%), Gaps = 113/433 (26%) Query: 55 EAIAPP--------APRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGG 106 E I PP P+P P +GP+ + G P P + + P+G Sbjct: 570 EQIQPPPSSGTPLLGPQPFPGQGPMSQ----IPQGFQQPHPSQQMPMNMAQMGPPGPQGQ 625 Query: 107 -SPPLPEGQAGTGQRPQG--LAESGEEPLPRPCQGTLVSGP-GPYFCIPSRLQPDTQWQE 162 PP P+GQ G PQG L + G P QG + GP GP P + P Q Sbjct: 626 FRPPGPQGQMG----PQGPPLHQGGGGP-----QGFM--GPQGPQG--PPQGLPRPQDMH 672 Query: 163 KAFIAVVLQGGLGKCLGSAGRQRHVVHSGV----GQGQAQAKAGLQGQHAVHLPGWPQGV 218 G G QRH G G Q +G QG P PQG Sbjct: 673 ----------------GPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGH 716 Query: 219 PLGNGPPGVGQHVCPVLQGLPRGPGTQVHLAYGLSSERQAAVPDSQHQVHILCRDRPEHE 278 GPPG H+ P QG P G Q G R P H Sbjct: 717 IGPQGPPGPQGHLGP--QGPPGTQGMQ-----GPPGPRGMQGPPHPH------------- 756 Query: 279 LDLHVGLWEGKVAEG----ASQGSGLSTGPPSVQQPPHLSGSRRAQQVPVLQNMLQIHGA 334 G+ G ++G SQG + P +Q PP R Q P Q M+ H Sbjct: 757 -----GIQGGPGSQGIQGPVSQGPLMGLNPRGMQGPP----GPRENQGPAPQGMIMGHPP 807 Query: 335 QWQ--TELTQGLM---PREALEVEKLH-LQGGPWQLRL----RDLRQRPG-LVKHGAERA 383 Q GL+ P+E +++ +QG P Q + ++LR PG + G + Sbjct: 808 QEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQG 867 Query: 384 SVHFCLMSVSGLGGDADPGIGVHGAPRPQVGCLPQAHPDLGASGVGSAKGPCPVSSPPPR 443 S+ P G+ G P PQ Q +P A G ++GP P Sbjct: 868 SL------------GPPPQGGMQGPPGPQ----GQQNP---ARGPHPSQGPIPFQQQKTP 908 Query: 444 AWGLPFPRHPFRK 456 G PR PF + Sbjct: 909 LLG-DGPRAPFNQ 920 Score = 32.3 bits (72), Expect = 1.6 Identities = 47/188 (25%), Positives = 64/188 (34%), Gaps = 21/188 (11%) Query: 64 PPPCRGPLD-RDL-APSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEGQAGTGQRP 121 P RGP + R + P G P LR P + + P+G P P+G P Sbjct: 824 PQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPGP 883 Query: 122 QGL------AESGEEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQWQEKAFIAVVLQGGLG 175 QG + P+P Q T + G GP P Q + ++ G Sbjct: 884 QGQQNPARGPHPSQGPIPFQQQKTPLLGDGP-------RAPFNQEGQSTGPPPLIPG--- 933 Query: 176 KCLGSAGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLGNGPPGVGQHVCPVL 235 LG G Q + GQG K +G H+ + +G P G P Sbjct: 934 --LGQQGAQGRIPPLNPGQGPGPNKGDSRGPPNHHMGPMSERRHEQSGGPEHGPERGPFR 991 Query: 236 QGLP-RGP 242 G RGP Sbjct: 992 GGQDCRGP 999 >gi|239751831 PREDICTED: hypothetical protein XP_002348009 [Homo sapiens] Length = 589 Score = 39.3 bits (90), Expect = 0.013 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 12/104 (11%) Query: 175 GKCLGSAGRQRHVVHSGVGQGQAQ----------AKAGLQGQHAVHLPGWPQGVPLGNGP 224 G L S GR+ H + + V +G+A + G++G+H+ H P G P P Sbjct: 16 GILLKSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKP 75 Query: 225 PGVGQHVCPVLQGLPRGPGTQVHLAYGLSSERQA-AVPDSQHQV 267 G P G P GT V +G ++A PD H++ Sbjct: 76 HHNGCAQRPAASGCPAQEGT-VAAGHGHQGPQEAKKKPDGSHRI 118 >gi|239746324 PREDICTED: hypothetical protein XP_002343730 [Homo sapiens] Length = 329 Score = 39.3 bits (90), Expect = 0.013 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 12/104 (11%) Query: 175 GKCLGSAGRQRHVVHSGVGQGQAQ----------AKAGLQGQHAVHLPGWPQGVPLGNGP 224 G L S GR+ H + + V +G+A + G++G+H+ H P G P P Sbjct: 16 GILLKSFGREEHGIEAAVSEGKAHDEGFSPQGPGQECGVRGRHSEHQPQQVVGCPADKKP 75 Query: 225 PGVGQHVCPVLQGLPRGPGTQVHLAYGLSSERQA-AVPDSQHQV 267 G P G P GT V +G ++A PD H++ Sbjct: 76 HHNGCAQRPAASGCPAQEGT-VAAGHGHQGPQEAKKKPDGSHRI 118 >gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] Length = 416 Score = 39.3 bits (90), Expect = 0.013 Identities = 71/240 (29%), Positives = 88/240 (36%), Gaps = 49/240 (20%) Query: 54 PEAIAPPA-PRPPPCRG---------PLDRDLAPSRSGGSWPQ-----PCRLRSPAARRG 98 P+ PP P+ PP +G P + P GG+ PQ P + + P + G Sbjct: 150 PQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 209 Query: 99 EICAPRGGSPP-LPEGQAGTGQRPQGLAES--GEEPLPRPCQGTLVSGPGPYFCIPSRLQ 155 P+G PP P+G G A S G+ P P G GP P P + Q Sbjct: 210 N--KPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPP---PGKPQ 264 Query: 156 -PDTQWQEKAFIAVVLQGGL--GKCLG---SAGRQRHVVHSGVGQGQAQA-KAGLQGQHA 208 P Q K QG GK G G + S G+ Q + G Q Q Sbjct: 265 GPPPQGGNKP------QGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGP 318 Query: 209 VHLPGWPQGVPL--GNGPPGVGQHVCPVLQGLPRGPGTQVHLAYGLSSERQAAVPDSQHQ 266 PG PQG P GN P G P G P+GP Q G S R A P + Q Sbjct: 319 PPPPGKPQGPPPQGGNKPQG------PPPPGKPQGPPPQ-----GGSKSRSARSPPGKPQ 367 Score = 35.4 bits (80), Expect = 0.18 Identities = 71/273 (26%), Positives = 94/273 (34%), Gaps = 76/273 (27%) Query: 54 PEAIAPPAPRP--PPCRG--PLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPP 109 P+ PP +P PP +G P + G PQ + RSP + G+ P+G P Sbjct: 68 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGK---PQG---P 121 Query: 110 LPEGQAGTGQRPQGLAESGEEPL-PRPCQGTLVSGPGPYFCIPSRLQ-PDTQWQEKAFIA 167 P+G G +PQG +P P P G GP P P + Q P Q K+ Sbjct: 122 PPQG----GNQPQGPPPPPGKPQGPPPQGGNKPQGPPP----PGKPQGPPPQGDNKS--- 170 Query: 168 VVLQGGLGKCLGSAGRQRHVVHSGVGQGQA-QAKAGLQGQHAVHLPGWPQGVPL--GNGP 224 S G+ Q + G Q Q PG PQG P GN P Sbjct: 171 ------------------RSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 212 Query: 225 PGVGQHVCPVLQGLPRGPGTQVHLAYGLSSERQAAVPDSQHQVHILCRDRPEHELDLHVG 284 G P G P+GP Q G + + A P + Q Sbjct: 213 QG------PPPPGKPQGPPPQ-----GDNKSQSARSPPGKPQ------------------ 243 Query: 285 LWEGKVAEGASQGSGLSTGPPSVQQPPHLSGSR 317 G +G +Q G P Q PP G++ Sbjct: 244 ---GPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 273 Score = 32.0 bits (71), Expect = 2.0 Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 10/86 (11%) Query: 59 PPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEGQAGTG 118 PP P P +GP + + SRS S P + + P + G P+G PP P G G Sbjct: 339 PPPPGKP--QGPPPQGGSKSRSARS--PPGKPQGPPQQEGN--NPQG--PPPPAG--GNP 388 Query: 119 QRPQGLAESGEEPLPRPCQGTLVSGP 144 Q+PQ + PRP QG S P Sbjct: 389 QQPQAPPAGQPQGPPRPPQGGRPSRP 414 >gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens] Length = 668 Score = 39.3 bits (90), Expect = 0.013 Identities = 53/189 (28%), Positives = 70/189 (37%), Gaps = 24/189 (12%) Query: 58 APPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEGQAGT 117 +P PP +GP R P G P R+ SP I PRG PP G G Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGDKGAIG-MPGRVGSPGDAGLSIIGPRG--PPGQPGTRGF 170 Query: 118 GQRPQGLAESGEEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQWQEKAFIAVVLQGGLGKC 177 P + G+ P P ++GP P + P Q EK +C Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGP------PGQPGPQGQKGEKGQCGEYPHR---EC 221 Query: 178 LGSAGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLGNGP---PGVGQHVCPV 234 L S + + + Q A G Q Q ++ P P G P +GP PG+ + P Sbjct: 222 LSS-------MPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGP- 273 Query: 235 LQGLPRGPG 243 GLP PG Sbjct: 274 -PGLPGPPG 281 >gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens] Length = 695 Score = 39.3 bits (90), Expect = 0.013 Identities = 53/189 (28%), Positives = 70/189 (37%), Gaps = 24/189 (12%) Query: 58 APPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEGQAGT 117 +P PP +GP R P G P R+ SP I PRG PP G G Sbjct: 114 SPGCNCPPAFQGPTGRPGLPGDKGAIG-MPGRVGSPGDAGLSIIGPRG--PPGQPGTRGF 170 Query: 118 GQRPQGLAESGEEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQWQEKAFIAVVLQGGLGKC 177 P + G+ P P ++GP P + P Q EK +C Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGP------PGQPGPQGQKGEKGQCGEYPHR---EC 221 Query: 178 LGSAGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLGNGP---PGVGQHVCPV 234 L S + + + Q A G Q Q ++ P P G P +GP PG+ + P Sbjct: 222 LSS-------MPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGP- 273 Query: 235 LQGLPRGPG 243 GLP PG Sbjct: 274 -PGLPGPPG 281 >gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] Length = 1297 Score = 38.9 bits (89), Expect = 0.017 Identities = 67/261 (25%), Positives = 88/261 (33%), Gaps = 33/261 (12%) Query: 2 GAWRATETSPPVRPPGLAACCRPVQEVLVGGAVAG--LLYLGLGDALEMPLSFSPEAIAP 59 GA A +P P G+ C V G VAG + + +G L + + AP Sbjct: 513 GAVAAAGNAPERLPAGVQGCGEEVGRGARGDRVAGGHVEVVPVGQQLAICMLHGQLGTAP 572 Query: 60 PAPRPPPCRG-----------PLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSP 108 A P G P R+ R GG WP R P R G GG P Sbjct: 573 HAHVPTVLGGALGGRAGLVAAPARRECPARRRGGCWP-----RRPRRRHGG--GGGGGGP 625 Query: 109 PLPE----GQAGTGQRPQGLAESGEEPLPRPCQGTL---VSGPGPYFCIPSRLQPDTQWQ 161 L + G AG +A + P R + V+ P + + D Sbjct: 626 GLQDLLGGGHAGGAHGHVVVAPAAAAPTAREGRAGRHGHVAVVCPQVAAGAPVGADLDVS 685 Query: 162 EKAFIAVVLQGGLGKCLGSAGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLG 221 ++ VV G G+ G A R G QG + G G LPGW G Sbjct: 686 VVLWVGVVGHLGRGRGAGRAEAARAAREGGPHQG-VFIQRGRGGLGHRPLPGW-----RG 739 Query: 222 NGPPGVGQHVCPVLQGLPRGP 242 G + Q VL +PR P Sbjct: 740 QGVGPLAQPSVQVLGRVPRDP 760 >gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] Length = 1297 Score = 38.9 bits (89), Expect = 0.017 Identities = 67/261 (25%), Positives = 88/261 (33%), Gaps = 33/261 (12%) Query: 2 GAWRATETSPPVRPPGLAACCRPVQEVLVGGAVAG--LLYLGLGDALEMPLSFSPEAIAP 59 GA A +P P G+ C V G VAG + + +G L + + AP Sbjct: 513 GAVAAAGNAPERLPAGVQGCGEEVGRGARGDRVAGGHVEVVPVGQQLAICMLHGQLGTAP 572 Query: 60 PAPRPPPCRG-----------PLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSP 108 A P G P R+ R GG WP R P R G GG P Sbjct: 573 HAHVPTVLGGALGGRAGLVAAPARRECPARRRGGCWP-----RRPRRRHGG--GGGGGGP 625 Query: 109 PLPE----GQAGTGQRPQGLAESGEEPLPRPCQGTL---VSGPGPYFCIPSRLQPDTQWQ 161 L + G AG +A + P R + V+ P + + D Sbjct: 626 GLQDLLGGGHAGGAHGHVVVAPAAAAPTAREGRAGRHGHVAVVCPQVAAGAPVGADLDVS 685 Query: 162 EKAFIAVVLQGGLGKCLGSAGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGWPQGVPLG 221 ++ VV G G+ G A R G QG + G G LPGW G Sbjct: 686 VVLWVGVVGHLGRGRGAGRAEAARAAREGGPHQG-VFIQRGRGGLGHRPLPGW-----RG 739 Query: 222 NGPPGVGQHVCPVLQGLPRGP 242 G + Q VL +PR P Sbjct: 740 QGVGPLAQPSVQVLGRVPRDP 760 >gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens] Length = 483 Score = 38.5 bits (88), Expect = 0.022 Identities = 37/115 (32%), Positives = 48/115 (41%), Gaps = 18/115 (15%) Query: 59 PPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGG---SPPLPEGQA 115 P APR PP G D P R G P PC + P + P+G +PP +G Sbjct: 315 PQAPRWPPHPGKSREDRDPQRDG--LPGPCAVAQPGPAQ---AGPQGQGVLAPPTSQGSP 369 Query: 116 --GTGQRPQ--GLA---ESGEEPLPRPCQGTLVSGPGPYFCIPS---RLQPDTQW 160 G G+ PQ G A ++GE P P+P + G IP+ LQ W Sbjct: 370 WWGWGRGPQVAGAAWEPQAGEAPPPQPAPPDASARQGQMQGIPAPSQALQEPAPW 424 >gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo sapiens] Length = 1636 Score = 38.1 bits (87), Expect = 0.028 Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 17/81 (20%) Query: 59 PPAPRPPPC--RGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPL--PEGQ 114 PPA PPPC RG DL S SP ++ G +P GG P L + Sbjct: 1101 PPAAEPPPCLRRGAAAADLLSS-------------SPESQHGGTQSPGGGQPLLQPTKVD 1147 Query: 115 AGTGQRPQGLAESGEEPLPRP 135 A G+RPQ L +P P Sbjct: 1148 AAEGRRPQALRLIERDPYEHP 1168 Score = 37.0 bits (84), Expect = 0.063 Identities = 60/243 (24%), Positives = 82/243 (33%), Gaps = 59/243 (24%) Query: 407 GAPRPQVGCLPQAHPD---LGASGVGSAKGPCPVSSP---PPRAWGLPFPRHPFRKLAEP 460 G P P++G PQ HP A G + P P+ P PP+A GL P+ P+ +P Sbjct: 945 GFPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQAPGLLPPQSPYPYAPQP 1004 Query: 461 LVLRSGALHLLASKVELQGELQAPPLLSIPRAGLQAIHIRLHLEWVVVVPRALPRPTDSL 520 VL Q PP +H +L+ P P P S Sbjct: 1005 GVLG-----------------QPPP----------PLHTQLY-----PGPAQDPLPAHSG 1032 Query: 521 SLGFFLWRRQQQQAAQRRQETRRTPAARAPAMRAQ-RGPGGVPATRSGISPGIAVVPAGA 579 +L F + + P A PA + GP P T G S Sbjct: 1033 ALPF---------PSPGPPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPS---------- 1073 Query: 580 GALGETGGCPIFLPCWMRPPPGSSLPPCFSLLGPGPWALPGGPISSLGVSSLRSHHFLAS 639 + G++ P +P P +PP P P G + L SS S H Sbjct: 1074 -SAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGTQ 1132 Query: 640 TPG 642 +PG Sbjct: 1133 SPG 1135 >gi|82534351 microtubule-associated protein tau isoform 1 [Homo sapiens] Length = 758 Score = 37.7 bits (86), Expect = 0.037 Identities = 38/121 (31%), Positives = 50/121 (41%), Gaps = 14/121 (11%) Query: 60 PAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLPEGQAG--- 116 PA P P P SR+G S + +L+ A + +I PRG +PP +GQA Sbjct: 429 PAVCPEPPSSPKHVSSVTSRTGSSGAKEMKLKG-ADGKTKIATPRGAAPPGQKGQANATR 487 Query: 117 ----TGQRPQGLAESGEEPLPRPCQGTLVSG----PGPYFCIPSRLQPDTQWQEKAFIAV 168 T P+ SGE P G G PG PS P T+ +K +AV Sbjct: 488 IPAKTPPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTPSLPTPPTREPKK--VAV 545 Query: 169 V 169 V Sbjct: 546 V 546 >gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] Length = 1499 Score = 37.7 bits (86), Expect = 0.037 Identities = 61/211 (28%), Positives = 74/211 (35%), Gaps = 38/211 (18%) Query: 54 PEAIAPPAP----RPPPCRGPLDRDLAPSRSGGSWPQ-PCRLRSPAARRGEICAPRGGSP 108 P + PP P P RG D P G + P P +G+ P G P Sbjct: 509 PGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRP--GEP 566 Query: 109 PLPEGQAGTGQRPQGLAESGEEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQWQEKAFIAV 168 LP + TG E PL P + PGP I R QP + Sbjct: 567 GLPGARGLTGNPGVQGPEGKLGPLGAPGED---GRPGPPGSIGIRGQPGSMG-------- 615 Query: 169 VLQGGLGKCLGSAGRQRHVVHSGV-GQGQAQAK------------AGLQGQHAVHLPGWP 215 L G G G G+ ++GV GQ A K GL G+ P P Sbjct: 616 -LPGPKGSS-GDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGP 673 Query: 216 ---QGVPLGNGPPGVGQHVCPVLQGLPRGPG 243 QG+P GPPG G P QG+P PG Sbjct: 674 TGFQGLPGPPGPPGEGGK--PGDQGVPGDPG 702 Score = 30.8 bits (68), Expect = 4.5 Identities = 26/80 (32%), Positives = 28/80 (35%), Gaps = 16/80 (20%) Query: 557 GPGGVPATRSGIS----PGIAVVPAGAGALGETGGCPIFLPCWMRPPPGSSLPPCFSLLG 612 GP GVP + G PG P AG +G G P PG PP L G Sbjct: 888 GPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPP--GLRG 945 Query: 613 P----------GPWALPGGP 622 GP PGGP Sbjct: 946 DPGSHGRVGDRGPAGPPGGP 965 >gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] Length = 703 Score = 37.7 bits (86), Expect = 0.037 Identities = 78/268 (29%), Positives = 94/268 (35%), Gaps = 51/268 (19%) Query: 17 GLAACCRPVQEV--LVGGAVAGLLYLGLGDALEMPLSFSPEAIA--PPAPRPPPCRGPLD 72 G AA PV+ + + G V G G LEMPL P + P P P RGP Sbjct: 33 GGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPG 92 Query: 73 RDLAPSRSGGSWPQPCRLRSPAARRGEICAPRGGSPPLP-----EGQAGTGQRP-----Q 122 P + G P PA G + G P LP GQ G P Q Sbjct: 93 PPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQ 152 Query: 123 GL-AESGEEPLPRPCQGTLVSGPGPYFCIPS----RLQPDTQWQEKAFIAVVLQGGLGKC 177 GL G LP P T+ PG +P + +P Q + L+G G Sbjct: 153 GLRGPPGPPGLPGPSGITIPGKPGAQG-VPGPPGFQGEPGPQGEPGPPGDRGLKGDNG-- 209 Query: 178 LGSAGRQRHVVHSGVGQGQAQAKAGLQGQHAVHLPGW--------------PQGVP---- 219 +G G + GQG A GL G + PG P GVP Sbjct: 210 VGQPG-----LPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRG 264 Query: 220 ----LG-NGPPGVGQHVCPVLQGLPRGP 242 +G GPPGV P GLP GP Sbjct: 265 EPGAVGPKGPPGVDGVGVPGAAGLP-GP 291 Score = 37.0 bits (84), Expect = 0.063 Identities = 43/148 (29%), Positives = 50/148 (33%), Gaps = 20/148 (13%) Query: 549 APAMRAQRGPGGVPATRSGISPGIAVVPAGAGALGETGGCPIFLPCWMRPPPGSSLPPCF 608 AP GP G+P PG+ +P G GE+G + P G PP Sbjct: 218 APGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGV 277 Query: 609 SLLG-PGPWALPG--GPISSLGVSSLRSHHFLASTPG------------RTTAG-----A 648 +G PG LPG GP + G R L G R AG Sbjct: 278 DGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLG 337 Query: 649 HHGLPAMQVEHVHCSPQELGSPEGSAGS 676 G P E PQ LG P G GS Sbjct: 338 DRGEPGEDGEPGEQGPQGLGGPPGLPGS 365 Score = 34.3 bits (77), Expect = 0.41 Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 19/113 (16%) Query: 550 PAMRAQRGPGGVPATRSGISPGIAVVPAGAGALGETGGCPIFLPCWMRPPPGSSLPPCFS 609 P +R +GP G+ A + G+ PG +P G G TG P P + P G + Sbjct: 390 PGIRGDQGPSGL-AGKPGV-PGERGLPGAHGPPGPTG--PKGEPGFTGRPGGPGVAGALG 445 Query: 610 LLGP----------GPWALPG-----GPISSLGVSSLRSHHFLASTPGRTTAG 647 G GP +PG GPI G+ L+ L PG AG Sbjct: 446 QKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAG 498 Score = 33.5 bits (75), Expect = 0.70 Identities = 43/132 (32%), Positives = 48/132 (36%), Gaps = 28/132 (21%) Query: 550 PAMRAQRGPGGVPATRSGISPGIAVVPAGAGALGETGGCPIFLPCWMRPPPGSSLPPCFS 609 P + RGP GVP G P G GE G P + PPG LP Sbjct: 321 PGPKGDRGPAGVPGLL-----GDRGEPGEDGEPGEQG------PQGLGGPPG--LPGSAG 367 Query: 610 LLG----PGPW--ALPGGPISSLGVSSLRSHHFLASTPGRTTAGAHHGLPAMQVEHVHCS 663 L G PGP A PGGP G+ + LA PG GLP H Sbjct: 368 LPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPG---VPGERGLPG-----AHGP 419 Query: 664 PQELGSPEGSAG 675 P G P+G G Sbjct: 420 PGPTG-PKGEPG 430 Score = 32.7 bits (73), Expect = 1.2 Identities = 62/210 (29%), Positives = 71/210 (33%), Gaps = 45/210 (21%) Query: 59 PPAPRPPPCRGPL-------DRDLAPSRSGGSWPQ-PCRLRSPAARRGEICAPRGGSPPL 110 P P P RGP DR P G Q P L P G P PP Sbjct: 318 PGLPGPKGDRGPAGVPGLLGDRG-EPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPG 376 Query: 111 PEGQAGTG-----------QRPQGLAESGEEPLPRPCQGTLVSGPGPYFCIPSRLQPDTQ 159 P+G+AG G Q P GLA P R G GP P P Sbjct: 377 PKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPG--AHGP------PGPTGPK-- 426 Query: 160 WQEKAFIAVVLQGGLGKCLGSAGRQRHVVHSGV-GQGQAQAKAGLQGQHAVHLPGWPQGV 218 E F G+ LG G G+ GQ + +G+ G P PQG+ Sbjct: 427 -GEPGFTGRPGGPGVAGALGQKG------DLGLPGQPGLRGPSGIPGLQGPAGPIGPQGL 479 Query: 219 P--LGN----GPPGVGQHVCPVLQGLPRGP 242 P G GPPG G+ P G P GP Sbjct: 480 PGLKGEPGLPGPPGEGRAGEPGTAG-PTGP 508 Score = 31.6 bits (70), Expect = 2.6 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 193 GQGQAQAKAGLQGQHAVHLPGWPQGVPLGNGPPGVGQHVCPVLQGLPRGPGTQ 245 GQ + + G++G + P P G+P GP G+ P QG+P PG Q Sbjct: 138 GQPGLRGEPGIRGDQGLRGPPGPPGLP---GPSGITIPGKPGAQGVPGPPGFQ 187 Score = 30.0 bits (66), Expect = 7.7 Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 14/84 (16%) Query: 545 PAARAPAMRAQRGPGGVPA-TRSGIS-----PGIAVVPAGAGALGETGGCPIFLPCWMRP 598 P P + Q GP G P +R G + PG P G GE G I +R Sbjct: 100 PGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPG---IRGDQGLRG 156 Query: 599 PPGSSLPPCFSLLGPGPWALPGGP 622 PPG PP L GP +PG P Sbjct: 157 PPG---PP--GLPGPSGITIPGKP 175 >gi|71043876 undifferentiated embryonic cell transcription factor 1 [Homo sapiens] Length = 341 Score = 37.7 bits (86), Expect = 0.037 Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 53 SPEAIAPPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRG--EICAPRGGSPP 109 SP +PPAP P + D AP R GS P P P + G E CAP +PP Sbjct: 215 SPAPGSPPAPAPTALATCIPEDRAPVRGPGSPPPPPAREDPDSPPGRPEDCAPPPAAPP 273 >gi|122692281 hypothetical protein LOC645369 [Homo sapiens] Length = 621 Score = 37.7 bits (86), Expect = 0.037 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 54 PEAIAPPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLR-SPAARR 97 P+ APP+P PPP G D D +P S P RL SP RR Sbjct: 476 PDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRR 520 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.137 0.446 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,963,098 Number of Sequences: 37866 Number of extensions: 2645853 Number of successful extensions: 14899 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 563 Number of HSP's that attempted gapping in prelim test: 12752 Number of HSP's gapped (non-prelim): 2780 length of query: 707 length of database: 18,247,518 effective HSP length: 109 effective length of query: 598 effective length of database: 14,120,124 effective search space: 8443834152 effective search space used: 8443834152 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.