Guide to the Human Genome
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Name: PWWP2A Sequence: fasta or formatted (755aa) NCBI GI: 195963316
Description:

PWWP domain containing 2A isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {560aa} PWWP domain containing 2A isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         64           4
 C cysteine            1.1          8           1
 D aspartate           4.0         30           2
 E glutamate           8.3         63           2
 F phenylalanine       2.5         19           1
 G glycine             5.3         40           2
 H histidine           1.5         11           1
 I isoleucine          2.9         22           2
 K lysine              9.0         68           2
 L leucine             6.1         46           2
 M methionine          1.6         12           1
 N asparagine          3.8         29           2
 P proline            10.7         81           7
 Q glutamine           4.2         32           2
 R arginine            5.2         39           2
 S serine             11.5         87           4
 T threonine           5.4         41           2
 V valine              6.4         48           2
 W tryptophan          0.7          5           2
 Y tyrosine            1.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PWWP domain containing 2A isoform b 
PWWP2A                0.682   PWWP domain containing 2A isoform a 
PWWP2B                0.200   PWWP domain containing 2 isoform 1 
PWWP2B                0.111   PWWP domain containing 2 isoform 2 
TTN                   0.025   titin isoform N2-A 
SAMD1                 0.025   sterile alpha motif domain containing 1 
DNMT3A                0.024   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
DNMT3A                0.024   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
PRB1                  0.024   proline-rich protein BstNI subfamily 1 isoform 1 pre...
SYN1                  0.023   synapsin I isoform Ia 
SYN1                  0.023   synapsin I isoform Ib 
PRR12                 0.023   proline rich 12 
DNMT3A                0.022   DNA cytosine methyltransferase 3 alpha isoform b [Ho...
PRB3                  0.022   proline-rich protein BstNI subfamily 3 precursor [H...
FMNL1                 0.022   formin-like 1 
PRB1                  0.022   proline-rich protein BstNI subfamily 1 isoform 2 pre...
NACA                  0.021   nascent polypeptide-associated complex alpha subuni...
MLL2                  0.021   myeloid/lymphoid or mixed-lineage leukemia 2 
FBLIM1                0.020   filamin-binding LIM protein-1 isoform b 
FBLIM1                0.020   filamin-binding LIM protein-1 isoform a 
PRB2                  0.020   proline-rich protein BstNI subfamily 2 
FLJ22184              0.020   PREDICTED: hypothetical protein LOC80164 
TNK2                  0.020   tyrosine kinase, non-receptor, 2 isoform 1 
NCOR2                 0.020   nuclear receptor co-repressor 2 isoform 2 
ZFHX4                 0.020   zinc finger homeodomain 4 
PRB4                  0.020   proline-rich protein BstNI subfamily 4 precursor [Ho...
DNMT3B                0.020   DNA cytosine-5 methyltransferase 3 beta isoform 6 [H...
DNMT3B                0.020   DNA cytosine-5 methyltransferase 3 beta isoform 3 [H...
DNMT3B                0.020   DNA cytosine-5 methyltransferase 3 beta isoform 2 [H...
DNMT3B                0.020   DNA cytosine-5 methyltransferase 3 beta isoform 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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