Guide to the Human Genome
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Name: MTHFSD Sequence: fasta or formatted (382aa) NCBI GI: 116875838
Description:

methenyltetrahydrofolate synthetase domain containing isoform 3

Not currently referenced in the text

Other entries for this name:
alt prot {383aa} methenyltetrahydrofolate synthetase domain containing isoform 1
alt prot {383aa} methenyltetrahydrofolate synthetase domain containing isoform 2
alt prot {382aa} methenyltetrahydrofolate synthetase domain containing isoform 4
alt prot {363aa} methenyltetrahydrofolate synthetase domain containing isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         27           3
 C cysteine            1.6          6           1
 D aspartate           5.8         22           1
 E glutamate           5.8         22           2
 F phenylalanine       1.6          6           1
 G glycine             7.9         30           1
 H histidine           1.8          7           2
 I isoleucine          4.5         17           1
 K lysine              5.2         20           2
 L leucine             9.7         37           2
 M methionine          2.4          9           2
 N asparagine          1.8          7           1
 P proline             8.6         33           3
 Q glutamine           5.2         20           2
 R arginine            7.9         30           3
 S serine              5.2         20           1
 T threonine           5.5         21           1
 V valine              9.4         36           3
 W tryptophan          1.0          4           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   methenyltetrahydrofolate synthetase domain containi... 
MTHFSD                0.995   methenyltetrahydrofolate synthetase domain containi...
MTHFSD                0.948   methenyltetrahydrofolate synthetase domain containi...
MTHFSD                0.932   methenyltetrahydrofolate synthetase domain containi...
MTHFSD                0.926   methenyltetrahydrofolate synthetase domain containi...
SFRS3                 0.021   splicing factor, arginine/serine-rich 3 
CSTF2T                0.017   cleavage stimulation factor, 3' pre-RNA, subunit 2, ...
SFRS7                 0.016   splicing factor, arginine/serine-rich 7 
CSTF2                 0.015   cleavage stimulation factor subunit 2 
BAI1                  0.013   brain-specific angiogenesis inhibitor 1 precursor [...
SFRS2B                0.012   splicing factor, arginine/serine-rich 2B 
LOC100291672          0.011   PREDICTED: hypothetical protein XP_002345662 
LOC100287387          0.011   PREDICTED: hypothetical protein XP_002342351 
TRMT2A                0.011   HpaII tiny fragments locus 9C 
TRMT2A                0.011   HpaII tiny fragments locus 9C 
FLJ22184              0.011   PREDICTED: hypothetical protein FLJ22184 
SFRS1                 0.011   splicing factor, arginine/serine-rich 1 isoform 2 [...
SFRS1                 0.011   splicing factor, arginine/serine-rich 1 isoform 1 [Ho...
HIC2                  0.011   hypermethylated in cancer 2 
SMARCA2               0.011   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.011   SWI/SNF-related matrix-associated actin-dependent re...
ATP1A2                0.011   Na+/K+ -ATPase alpha 2 subunit proprotein 
RDBP                  0.011   RD RNA-binding protein 
SNRPA                 0.009   small nuclear ribonucleoprotein polypeptide A 
ELAVL3                0.009   ELAV-like protein 3 isoform 1 
ELAVL3                0.009   ELAV-like protein 3 isoform 2 
INPP5E                0.009   inositol polyphosphate-5-phosphatase E 
SFRS9                 0.009   splicing factor, arginine/serine-rich 9 
SYDE1                 0.009   synapse defective 1, Rho GTPase, homolog 1 
CCDC102A              0.009   coiled-coil domain containing 102A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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