Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239746556
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746556 PREDICTED: hypothetical protein XP_002343778 [Homo
sapiens]
(169 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746556 PREDICTED: hypothetical protein XP_002343778 [Homo ... 342 1e-94
gi|239753331 PREDICTED: hypothetical protein [Homo sapiens] 116 1e-26
gi|239747900 PREDICTED: hypothetical protein XP_002346471 [Homo ... 116 1e-26
gi|239741792 PREDICTED: hypothetical protein XP_002342302 [Homo ... 116 1e-26
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 38 0.004
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|30795231 brain abundant, membrane attached signal protein 1 [... 36 0.014
gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo ... 36 0.014
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 36 0.018
gi|40288197 GATA binding protein 6 [Homo sapiens] 35 0.031
gi|239756864 PREDICTED: hypothetical protein [Homo sapiens] 35 0.040
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 35 0.040
gi|239751356 PREDICTED: hypothetical protein XP_002347829 [Homo ... 35 0.040
gi|239745867 PREDICTED: hypothetical protein XP_002343607 [Homo ... 35 0.040
gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo s... 34 0.068
gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo s... 34 0.068
gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo s... 34 0.068
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 33 0.089
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 33 0.089
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 33 0.089
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 33 0.089
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 33 0.089
gi|49472835 bridging integrator 2 [Homo sapiens] 33 0.089
gi|71040090 regulatory factor X, 5 [Homo sapiens] 33 0.15
gi|4557843 regulatory factor X, 5 [Homo sapiens] 33 0.15
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 33 0.15
gi|28875797 small protein rich in arginine and glycine [Homo sap... 32 0.20
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 32 0.20
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 32 0.20
>gi|239746556 PREDICTED: hypothetical protein XP_002343778 [Homo
sapiens]
Length = 169
Score = 342 bits (876), Expect = 1e-94
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 MEKFSKSLPGPEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTIKRKRGEERKRRRAA 60
MEKFSKSLPGPEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTIKRKRGEERKRRRAA
Sbjct: 1 MEKFSKSLPGPEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTIKRKRGEERKRRRAA 60
Query: 61 IMAKDPAKRDGGLRTGPSLRSSPAGAEIAPTRTPRWLASAAGSPSFCPRLSLHTSPRAEG 120
IMAKDPAKRDGGLRTGPSLRSSPAGAEIAPTRTPRWLASAAGSPSFCPRLSLHTSPRAEG
Sbjct: 61 IMAKDPAKRDGGLRTGPSLRSSPAGAEIAPTRTPRWLASAAGSPSFCPRLSLHTSPRAEG 120
Query: 121 AGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRGGAKSERGLLARCHLS 169
AGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRGGAKSERGLLARCHLS
Sbjct: 121 AGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRGGAKSERGLLARCHLS 169
>gi|239753331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 138
Score = 116 bits (290), Expect = 1e-26
Identities = 78/144 (54%), Positives = 85/144 (59%), Gaps = 12/144 (8%)
Query: 1 MEKFSKSLPGPEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTIKRKRGEERKRRRAA 60
MEKFSKSLPGPEAQ ASPLTG GCRT PHL RAL QPR SSSQTIKRKRGE RKRRRAA
Sbjct: 1 MEKFSKSLPGPEAQLASPLTGTGCRTS-PHLARALPQPRGSSSQTIKRKRGEARKRRRAA 59
Query: 61 IMAKDPAKRDGGLRTG--PSLRSSPAGAEIAPTRTPRWLASAAGSPSFCPR-LSLHTSPR 117
+AKDP KR+G G P ++ S P TP P P LS H
Sbjct: 60 SVAKDPTKREGRSTHGTQPPIKPSRCRDRAHPDPTP--AGQRCAQPQLLPAPLSSHF--- 114
Query: 118 AEGAGSGL---SQPQRRALTAQGG 138
E GS L P++ +A GG
Sbjct: 115 PESRGSRLRPQPAPEKGPHSAAGG 138
>gi|239747900 PREDICTED: hypothetical protein XP_002346471 [Homo
sapiens]
Length = 138
Score = 116 bits (290), Expect = 1e-26
Identities = 78/144 (54%), Positives = 85/144 (59%), Gaps = 12/144 (8%)
Query: 1 MEKFSKSLPGPEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTIKRKRGEERKRRRAA 60
MEKFSKSLPGPEAQ ASPLTG GCRT PHL RAL QPR SSSQTIKRKRGE RKRRRAA
Sbjct: 1 MEKFSKSLPGPEAQLASPLTGTGCRTS-PHLARALPQPRGSSSQTIKRKRGEARKRRRAA 59
Query: 61 IMAKDPAKRDGGLRTG--PSLRSSPAGAEIAPTRTPRWLASAAGSPSFCPR-LSLHTSPR 117
+AKDP KR+G G P ++ S P TP P P LS H
Sbjct: 60 SVAKDPTKREGRSTHGTQPPIKPSRCRDRAHPDPTP--AGQRCAQPQLLPAPLSSHF--- 114
Query: 118 AEGAGSGL---SQPQRRALTAQGG 138
E GS L P++ +A GG
Sbjct: 115 PESRGSRLRPQPAPEKGPHSAAGG 138
>gi|239741792 PREDICTED: hypothetical protein XP_002342302 [Homo
sapiens]
Length = 138
Score = 116 bits (290), Expect = 1e-26
Identities = 78/144 (54%), Positives = 85/144 (59%), Gaps = 12/144 (8%)
Query: 1 MEKFSKSLPGPEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTIKRKRGEERKRRRAA 60
MEKFSKSLPGPEAQ ASPLTG GCRT PHL RAL QPR SSSQTIKRKRGE RKRRRAA
Sbjct: 1 MEKFSKSLPGPEAQLASPLTGTGCRTS-PHLARALPQPRGSSSQTIKRKRGEARKRRRAA 59
Query: 61 IMAKDPAKRDGGLRTG--PSLRSSPAGAEIAPTRTPRWLASAAGSPSFCPR-LSLHTSPR 117
+AKDP KR+G G P ++ S P TP P P LS H
Sbjct: 60 SVAKDPTKREGRSTHGTQPPIKPSRCRDRAHPDPTP--AGQRCAQPQLLPAPLSSHF--- 114
Query: 118 AEGAGSGL---SQPQRRALTAQGG 138
E GS L P++ +A GG
Sbjct: 115 PESRGSRLRPQPAPEKGPHSAAGG 138
>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 39.3 bits (90), Expect = 0.002
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 26/141 (18%)
Query: 39 RESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPTRTPRWLA 98
R ++Q R+ G R+R A A+ P GG R GP + A A +TP+
Sbjct: 51 RVRAAQARARRGGGARER--PAEGARGPRAARGGARAGPDAQLRAARTHRARAQTPQLRR 108
Query: 99 SAAGSPSF---------------CPRLSLHTS------PRAEGAGSGLSQPQRRALTAQG 137
AA + SF P+L H P EG G S+ + A A G
Sbjct: 109 EAACAGSFFFRKCRQSPRSHGQPFPQLRSHWQAPRQGWPAQEGGGRRPSRREEAAALAGG 168
Query: 138 G---AEGLLERGQSGHGGRGG 155
G A GL RG G+GG
Sbjct: 169 GKRTAPGLRGRGGRAAAGQGG 189
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 38.1 bits (87), Expect = 0.004
Identities = 48/183 (26%), Positives = 69/183 (37%), Gaps = 28/183 (15%)
Query: 2 EKFSKSLPGPEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTIKRKRGEERKRRRAAI 61
E S + PE P S G R+ T++ PR SS++ + R RR+
Sbjct: 1650 EGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRS 1709
Query: 62 MAKDPAKRDGGLRTGPSLRSSPAGAEIAP---TRTPRWLASAAG-----------SPSFC 107
+ P R RT P R SP+ + P +R+ R SA+ SPS
Sbjct: 1710 ASSSPETRS---RTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPK 1766
Query: 108 P-----------RLSLHTSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRGGA 156
P R T+ R + +GS S +RR + RG SG+ R A
Sbjct: 1767 PRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPA 1826
Query: 157 KSE 159
+ E
Sbjct: 1827 RQE 1829
Score = 31.2 bits (69), Expect = 0.44
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 32 TRALWQPRESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPT 91
+R+ +P S S+ +R RG R RR ++ PA R G S +PA + +
Sbjct: 534 SRSPQRPGWSRSRNTQR-RGRSRSARRGRSHSRSPATR------GRSRSRTPARRGRSRS 586
Query: 92 RTPRWLASAAGSPSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHG 151
RTP S + +P+ R S +P G + +RR+ T R +
Sbjct: 587 RTPARRRSRSRTPT--RRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRS 644
Query: 152 GRGGAKS 158
GR +++
Sbjct: 645 GRSRSRT 651
Score = 30.4 bits (67), Expect = 0.76
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 14/125 (11%)
Query: 41 SSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPTRTPRWLASA 100
S S+T R+R R R ++ PA+R G R+ +PA + +RTP A
Sbjct: 615 SRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRS-----RTPARRGRSRSRTP---ARR 666
Query: 101 AGSPSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQS-----GHGGRGG 155
S S P S A G S+ R + + L+ RG+S GR G
Sbjct: 667 GRSRSRTPARRSGRSRSRTPARRGRSR-SRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSG 725
Query: 156 AKSER 160
+ SER
Sbjct: 726 SSSER 730
Score = 29.6 bits (65), Expect = 1.3
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 6 KSLPGPEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTIK---RKRGEERKRRRAAIM 62
+S P PE + +P + C P ++ PR+S S++ + + R+R+
Sbjct: 874 ESSPDPELKSRTP-SRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSG 932
Query: 63 AKDPAKRDGGLRTGPSLRSSPAGAEIAPTRT-PRWLASAAGSPSFCPRLSLHTSPRAEGA 121
+ P+ RT P S + +R PR+ S + SP ++ T PR +
Sbjct: 933 SSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPD--TKVKPETPPRQSHS 990
Query: 122 GSGLSQPQRRALTAQG 137
GS P+ +A T G
Sbjct: 991 GSISPYPKVKAQTPPG 1006
>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 37.4 bits (85), Expect = 0.006
Identities = 40/139 (28%), Positives = 53/139 (38%), Gaps = 25/139 (17%)
Query: 39 RESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPTRTPRWLA 98
R ++Q R+ G R+R A A+ P GG R GP + A A +TP+
Sbjct: 51 RVRAAQARARRGGGARER--PAEGARGPRAARGGARAGPDAQLRAARTHRARAQTPQLRR 108
Query: 99 SAAGSPSF---------------CPRLSLHTS------PRAEGAGSGLSQPQRRALTAQG 137
AA + SF P+L H P EG G S+ + A A G
Sbjct: 109 EAACAGSFFFRKCRQSPRSHGQPFPQLRSHWQAPRQGWPAQEGGGRRPSRREEAAALAGG 168
Query: 138 GAEGLLERGQSGHGGRGGA 156
G G+ G GGR A
Sbjct: 169 GKR--TAPGRRGRGGRAAA 185
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 36.2 bits (82), Expect = 0.014
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 20/123 (16%)
Query: 11 PEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTI----KRKRGEERKRRRAAIMAKDP 66
PE + A+P AG P A P ES++ ++ GE +K A A
Sbjct: 104 PEQEQAAPGPAAGGEA--PKAAEAAAAPAESAAPAAGEEPSKEEGEPKKTEAPAAPAAQE 161
Query: 67 AKRDGGLRTGPSLRSSPAGAEIAPTRTPRWLASAAGSPSFCPRLSLHTSPRAEGAGSGLS 126
K DG P+ S P +E AP+ A+ A S ++P+A+G +
Sbjct: 162 TKSDGA----PASDSKPGSSEAAPSSKETPAATEAPS----------STPKAQGPAASAE 207
Query: 127 QPQ 129
+P+
Sbjct: 208 EPK 210
>gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo
sapiens]
Length = 800
Score = 36.2 bits (82), Expect = 0.014
Identities = 52/165 (31%), Positives = 61/165 (36%), Gaps = 45/165 (27%)
Query: 9 PGPEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTIKRKRGEERKRRRAAIMAKDPAK 68
PGP SP LP LW + G R R+ A + K
Sbjct: 317 PGPGRPSTSPCP-------LPPSLLCLWV-----------ESGTPRGRQSLA----EGVK 354
Query: 69 RDGG-----LRTGPSLRSSPAGA---EIAPTRTPRWLASAAGSPSFCPRLSLHTSPRAEG 120
RDGG + P + SS GA E +P R R A P P L T EG
Sbjct: 355 RDGGQGLPDVEGAPDMGSSGEGAGLEEGSPLRRER-----AWPP---PSLRTPTPGLTEG 406
Query: 121 AGSGLSQPQRRA---LTAQGGAEGLLER----GQSGHGGRGGAKS 158
G+GL QRR T GG +G L R G G G +GG S
Sbjct: 407 GGTGLPSKQRRGPSPKTELGGPQGSLGRASLSGPFGPGPQGGPPS 451
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 35.8 bits (81), Expect = 0.018
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 21/123 (17%)
Query: 43 SQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPTRTPRWLASAAG 102
S+ +R+RG++ +R++A+ A R GG + G LR + + + PRW
Sbjct: 357 SRKKQRRRGKKPRRQKAS--AAGAKSRGGGDKKG--LREAKRRGD--GRKKPRWQN---- 406
Query: 103 SPSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRGGAKSERGL 162
PR +P A+ G G +P+RR G + RG G G RG
Sbjct: 407 -----PRRRAQKAPAAKPRGGGSKKPRRR------GPKAAKSRGGKSRSGGGKKPRRRGQ 455
Query: 163 LAR 165
AR
Sbjct: 456 KAR 458
Score = 27.7 bits (60), Expect = 4.9
Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 39 RESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPTRTPRWLA 98
RE+ S+ K + G +K RR A R GG + R G + A R
Sbjct: 208 REAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRR--GQKAATGGKSRVGK 265
Query: 99 SAAGSPSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRGGAKS 158
S G R + + + ++ A +GG GQ+ GRGG K
Sbjct: 266 SRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKP 325
Query: 159 ER 160
R
Sbjct: 326 RR 327
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 35.0 bits (79), Expect = 0.031
Identities = 35/133 (26%), Positives = 50/133 (37%), Gaps = 10/133 (7%)
Query: 32 TRALWQPRESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPT 91
++ LW R + ++ EE + AA+ ++ PA DG G + S+ A A A
Sbjct: 125 SKLLWSSRGAKLSPFAPEQPEEMYQTLAALSSQGPAAYDGA--PGGFVHSAAAAAAAAAA 182
Query: 92 RTPRWLASAAGSPSFCPRLSLH-------TSPRAEGAGSGLSQPQRRA-LTAQGGAEGLL 143
+ S P L H + A GAG+ PQ A G G
Sbjct: 183 ASSPVYVPTTRVGSMLPGLPYHLQGSGSGPANHAGGAGAHPGWPQASADSPPYGSGGGAA 242
Query: 144 ERGQSGHGGRGGA 156
G +G GG G A
Sbjct: 243 GGGAAGPGGAGSA 255
>gi|239756864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 227
Score = 34.7 bits (78), Expect = 0.040
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 26/119 (21%)
Query: 71 GGLRTGPSLRSSPAGAEIA-------PTRTPRWLASAAGSPSFCPRL-------SLH--- 113
GG GP+ SP +E + PT++P L FCP L S H
Sbjct: 89 GGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSPPVLYSPHPLF 148
Query: 114 -----TSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRGGAKSERGLLARCH 167
+ P A + SG +P R L+ G EGL RG+S +G A +G AR H
Sbjct: 149 LQDPSSVPGATSSASGQGRPIGRRLS--GDLEGLRPRGRSRNGACSSAVFHQG--ARLH 203
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 34.7 bits (78), Expect = 0.040
Identities = 32/121 (26%), Positives = 44/121 (36%), Gaps = 17/121 (14%)
Query: 38 PRESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPTRTPRWL 97
PR ++ R R + +RRRA + A+ G R P G + P+ R
Sbjct: 81 PRPAAPGAAPRPRRQRLRRRRAKVGGWGCARARGLDRRAPGEGGRSPGGGLEPSPGARGA 140
Query: 98 ASAA----------GSPSFCPRLSLHTSP-------RAEGAGSGLSQPQRRALTAQGGAE 140
AA G P++ L P RA GA G P RR L + G +
Sbjct: 141 VGAAPAAARHRKPRGRSRRAPQMPLRVLPPILPGLSRAGGATGGRGLPGRRGLPGRSGLQ 200
Query: 141 G 141
G
Sbjct: 201 G 201
>gi|239751356 PREDICTED: hypothetical protein XP_002347829 [Homo
sapiens]
Length = 227
Score = 34.7 bits (78), Expect = 0.040
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 26/119 (21%)
Query: 71 GGLRTGPSLRSSPAGAEIA-------PTRTPRWLASAAGSPSFCPRL-------SLH--- 113
GG GP+ SP +E + PT++P L FCP L S H
Sbjct: 89 GGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSPPVLYSPHPLF 148
Query: 114 -----TSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRGGAKSERGLLARCH 167
+ P A + SG +P R L+ G EGL RG+S +G A +G AR H
Sbjct: 149 LQDPSSVPGATSSASGQGRPIGRRLS--GDLEGLRPRGRSRNGACSSAVFHQG--ARLH 203
>gi|239745867 PREDICTED: hypothetical protein XP_002343607 [Homo
sapiens]
Length = 227
Score = 34.7 bits (78), Expect = 0.040
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 26/119 (21%)
Query: 71 GGLRTGPSLRSSPAGAEIA-------PTRTPRWLASAAGSPSFCPRL-------SLH--- 113
GG GP+ SP +E + PT++P L FCP L S H
Sbjct: 89 GGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSPPVLYSPHPLF 148
Query: 114 -----TSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRGGAKSERGLLARCH 167
+ P A + SG +P R L+ G EGL RG+S +G A +G AR H
Sbjct: 149 LQDPSSVPGATSSASGQGRPIGRRLS--GDLEGLRPRGRSRNGACSSAVFHQG--ARLH 203
>gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo
sapiens]
Length = 1314
Score = 33.9 bits (76), Expect = 0.068
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 79 LRSSPAGAEIAPTRTPRWLASAAGSPSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGG 138
L S+P+GA ++P+RT A +AG L GAG G ++ GG
Sbjct: 24 LGSAPSGARLSPSRTSEGSAGSAG---------LGGGGAGAGAGVGAGGGGGSGASSGGG 74
Query: 139 AEGLLERGQSGHGGRGGAKS 158
A GL ++G GGR + S
Sbjct: 75 AGGLQPSSRAG-GGRPSSPS 93
>gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo
sapiens]
Length = 1353
Score = 33.9 bits (76), Expect = 0.068
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 79 LRSSPAGAEIAPTRTPRWLASAAGSPSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGG 138
L S+P+GA ++P+RT A +AG L GAG G ++ GG
Sbjct: 24 LGSAPSGARLSPSRTSEGSAGSAG---------LGGGGAGAGAGVGAGGGGGSGASSGGG 74
Query: 139 AEGLLERGQSGHGGRGGAKS 158
A GL ++G GGR + S
Sbjct: 75 AGGLQPSSRAG-GGRPSSPS 93
>gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo
sapiens]
Length = 1274
Score = 33.9 bits (76), Expect = 0.068
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 79 LRSSPAGAEIAPTRTPRWLASAAGSPSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGG 138
L S+P+GA ++P+RT A +AG L GAG G ++ GG
Sbjct: 24 LGSAPSGARLSPSRTSEGSAGSAG---------LGGGGAGAGAGVGAGGGGGSGASSGGG 74
Query: 139 AEGLLERGQSGHGGRGGAKS 158
A GL ++G GGR + S
Sbjct: 75 AGGLQPSSRAG-GGRPSSPS 93
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 33.5 bits (75), Expect = 0.089
Identities = 36/139 (25%), Positives = 50/139 (35%), Gaps = 11/139 (7%)
Query: 38 PRESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAE---IAPTRTP 94
P E Q ++ E RR + PA GG P P + P+ P
Sbjct: 135 PEEVEQQKRQQPGPSEHIERRVSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVP 194
Query: 95 RWLASAAGSPSFCPRLSLHTSPRAEGAG-----SGLSQPQRRALTAQGGAEG--LLERGQ 147
A G P P L P GAG + ++ + R ++ Q A G + +
Sbjct: 195 AAAHGAGGGPPPAPPLPAAQGPGGGGAGAPGLAAAIAGAKLRKVSKQEEASGGPTAPKAE 254
Query: 148 SGHGGRGGAKSE-RGLLAR 165
SG G GG E +LAR
Sbjct: 255 SGRSGGGGLMEEMNAMLAR 273
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 33.5 bits (75), Expect = 0.089
Identities = 43/145 (29%), Positives = 55/145 (37%), Gaps = 33/145 (22%)
Query: 18 PLTGAGCRTLLPHLTRALWQPRESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGP 77
P+T A LL H +L R S T+ + R R + K+P +R+ R+
Sbjct: 64 PITPAPALLLLSH---SLPAQRRSMQATVAKAGSPGRGR-----LGKEPRRRESWTRS-- 113
Query: 78 SLRSSPAGAEIAPTRTPRWLASAAGSPSFCPRLSLHTSPRAEGAGSGLSQPQRRALTA-- 135
AP R P AS AGS C R + G G +P+RR A
Sbjct: 114 -----------APRRCPYQDASRAGS-RVC-------RSRPQNRGGGDKKPRRRGQKAAK 154
Query: 136 QGGAEGLLERGQSGHGGRGGAKSER 160
G G RGQ G GAK R
Sbjct: 155 SRGGGGKKPRGQKAAG--AGAKKHR 177
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 33.5 bits (75), Expect = 0.089
Identities = 41/130 (31%), Positives = 55/130 (42%), Gaps = 11/130 (8%)
Query: 32 TRALWQPRESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPT 91
TRA R S +Q +R+R R+ A PA R G R+ A ++P
Sbjct: 65 TRAGPAQRSSCTQPHRRRRRGTRRLPPALT----PAGPYHSARPGGGARAR--AARVSPP 118
Query: 92 RTPR-WLASAAGSPSFCPRLSLHTSPRAE---GAGSGLSQPQRRALTAQGGAEGLLERGQ 147
PR L A SP+ P L+ RA G LS P RRA + + G L +G+
Sbjct: 119 TPPRSGLDPAVPSPTPAP-LARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGE 177
Query: 148 SGHGGRGGAK 157
G GGA+
Sbjct: 178 FAGRGAGGAR 187
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 33.5 bits (75), Expect = 0.089
Identities = 41/130 (31%), Positives = 55/130 (42%), Gaps = 11/130 (8%)
Query: 32 TRALWQPRESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPT 91
TRA R S +Q +R+R R+ A PA R G R+ A ++P
Sbjct: 65 TRAGPAQRSSCTQPHRRRRRGTRRLPPALT----PAGPYHSARPGGGARAR--AARVSPP 118
Query: 92 RTPR-WLASAAGSPSFCPRLSLHTSPRAE---GAGSGLSQPQRRALTAQGGAEGLLERGQ 147
PR L A SP+ P L+ RA G LS P RRA + + G L +G+
Sbjct: 119 TPPRSGLDPAVPSPTPAP-LARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGE 177
Query: 148 SGHGGRGGAK 157
G GGA+
Sbjct: 178 FAGRGAGGAR 187
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 33.5 bits (75), Expect = 0.089
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 81 SSPAGAEIAPTRTPRWLASAAG---SPSFCPRLSLHTSPRAEGAGSG-------LSQPQR 130
SSP G+E +P + + +S SPS P+ S + SP A A + +S R
Sbjct: 417 SSPQGSESSPAASSGYESSTPPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHR 476
Query: 131 RALTAQGGAEGLLERGQSGHGGRGGA 156
+ GGA G G GG GGA
Sbjct: 477 GGGSGSGGAGGGSGGGSGSGGGGGGA 502
>gi|49472835 bridging integrator 2 [Homo sapiens]
Length = 565
Score = 33.5 bits (75), Expect = 0.089
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 37 QPRESSSQTIKRKR----GEERKRRRAAIMAKD-PAKRDGGLRTGPSLRSSPAGAEIAPT 91
QP S+++ + R R G E+ ++RA+I P R R S R S +PT
Sbjct: 379 QPSSSATEVVLRTRTASEGSEQPKKRASIQRTSAPPSRPPPPRATASPRPSSGNIPSSPT 438
Query: 92 RT----PRWLASAAGSPSFCPRLSLHTSPRAEGAGSGLSQPQRR 131
+ P ++ G+ + PR SL SP E + P+ +
Sbjct: 439 ASGGGSPTSPRASLGTGTASPRTSLEVSPNPEPPEKPVRTPEAK 482
>gi|71040090 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 32.7 bits (73), Expect = 0.15
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 20/127 (15%)
Query: 33 RALWQPRESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPTR 92
+A Q E ++ KRKRG RK+ + G R L+S+ A +R
Sbjct: 449 KAAKQDIEDTASDAKRKRGRPRKKSGGS-----------GERNSTPLKSAAAMESAQSSR 497
Query: 93 TPRWLASAAGSPSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHGG 152
P W +G +++ AE G + + ++ A+ AQG +G + +G G G
Sbjct: 498 LP-WETWGSGGEG-------NSAGGAERPGP-MGEAEKGAVLAQGQGDGTVSKGGRGPGS 548
Query: 153 RGGAKSE 159
+ ++E
Sbjct: 549 QHTKEAE 555
>gi|4557843 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 32.7 bits (73), Expect = 0.15
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 20/127 (15%)
Query: 33 RALWQPRESSSQTIKRKRGEERKRRRAAIMAKDPAKRDGGLRTGPSLRSSPAGAEIAPTR 92
+A Q E ++ KRKRG RK+ + G R L+S+ A +R
Sbjct: 449 KAAKQDIEDTASDAKRKRGRPRKKSGGS-----------GERNSTPLKSAAAMESAQSSR 497
Query: 93 TPRWLASAAGSPSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHGG 152
P W +G +++ AE G + + ++ A+ AQG +G + +G G G
Sbjct: 498 LP-WETWGSGGEG-------NSAGGAERPGP-MGEAEKGAVLAQGQGDGTVSKGGRGPGS 548
Query: 153 RGGAKSE 159
+ ++E
Sbjct: 549 QHTKEAE 555
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 32.7 bits (73), Expect = 0.15
Identities = 50/181 (27%), Positives = 63/181 (34%), Gaps = 37/181 (20%)
Query: 8 LPGPEAQPASPLTGAGCRTLLPHLTRALW----QPRESSSQTIKRKRGEERKRRRAAIMA 63
+PG +A L G R P LTR PRE +R R E RR + A
Sbjct: 360 IPGAQAATRG-LPGRAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRA 418
Query: 64 KDPAK---------RDGGLRTGPSLRSSPAGAEIAPTR-----TPRWLASAAGSPSFCPR 109
+ ++ R + +GP + E P R P A AAGS C R
Sbjct: 419 RKASRSQSETSLLGRASAVPSGPPKYPTAEREEPRPPRPRRGPAPTLAAQAAGS---CRR 475
Query: 110 L----------SLHTSPRAE-----GAGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRG 154
PRA G G S PQRR L G++ G+ G GR
Sbjct: 476 WRSTAEIDAADGRRVRPRAPAARVPGPGPSPSAPQRRLLYGCAGSDSECSAGRLGPLGRR 535
Query: 155 G 155
G
Sbjct: 536 G 536
Score = 28.9 bits (63), Expect = 2.2
Identities = 33/118 (27%), Positives = 43/118 (36%), Gaps = 7/118 (5%)
Query: 54 RKRRRAAIMAKDPAKRDGGLRTGPSLR-----SSPAGAEIAPTRTPRWLASAAGSPSFCP 108
R+RR A P DGG R S+R +SP+ P R P L G P+
Sbjct: 260 RRRRGAGQPRTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPS-LERVGGHPTSPA 318
Query: 109 RLSLHTSPRAEG-AGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRGGAKSERGLLAR 165
LS + E A + P AEG L + Q G + + G AR
Sbjct: 319 ALSRAWASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKAQYIPGAQAATRGLPGRAAR 376
>gi|28875797 small protein rich in arginine and glycine [Homo
sapiens]
Length = 248
Score = 32.3 bits (72), Expect = 0.20
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 71 GGLRTGPSLRSSPAGAEIAPTRTPRWLASAAGSPSFCPRLSLHTSPRAEGAGSGLSQPQR 130
GGLR G + R+ G + R G + PR+ L G G R
Sbjct: 115 GGLRGGRATRTLLRGG-----MSLRGQNLLRGGRAVAPRMGLRRGGVRGRGGPGRGGLGR 169
Query: 131 RALTAQGG----AEGLLERGQSGHGGRG-GAKSERGLLAR 165
A+ +GG G++ RG+ G GGRG G RG LAR
Sbjct: 170 GAM-GRGGIGGRGRGMIGRGRGGFGGRGRGRGRGRGALAR 208
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 32.3 bits (72), Expect = 0.20
Identities = 48/174 (27%), Positives = 66/174 (37%), Gaps = 44/174 (25%)
Query: 9 PGPEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTIKRKRGEERKRRRAAIMAKDPAK 68
P P P +P G G + LW+ E GE+ R AA DPA+
Sbjct: 163 PTPRPFPPAPAGGKGEGG--GKESAVLWKGAEGG--------GEKGNRNMAAAPLGDPAR 212
Query: 69 RDGGLRTG------------PSLRSSPAG---AEIAPTRTPRWLA----SAAGS------ 103
+TG P+L S+P+ +AP R+ A AAG
Sbjct: 213 EAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQAAGEAAARGL 272
Query: 104 ----PSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHGGR 153
P+ CPR + + R G G+G + RRA G G+ E +SG G R
Sbjct: 273 WRRKPAPCPRGAC--AARLGGRGTGRA---RRAEFRVAGPRGVAEEAESGRGWR 321
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 32.3 bits (72), Expect = 0.20
Identities = 48/174 (27%), Positives = 66/174 (37%), Gaps = 44/174 (25%)
Query: 9 PGPEAQPASPLTGAGCRTLLPHLTRALWQPRESSSQTIKRKRGEERKRRRAAIMAKDPAK 68
P P P +P G G + LW+ E GE+ R AA DPA+
Sbjct: 163 PTPRPFPPAPAGGKGEGG--GKESAVLWKGAEGG--------GEKGNRNMAAAPLGDPAR 212
Query: 69 RDGGLRTG------------PSLRSSPAG---AEIAPTRTPRWLA----SAAGS------ 103
+TG P+L S+P+ +AP R+ A AAG
Sbjct: 213 EAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQAAGEAAARGL 272
Query: 104 ----PSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHGGR 153
P+ CPR + + R G G+G + RRA G G+ E +SG G R
Sbjct: 273 WRRKPAPCPRGAC--AARLGGRGTGRA---RRAEFRVAGPRGVAEEAESGRGWR 321
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,177,545
Number of Sequences: 37866
Number of extensions: 437867
Number of successful extensions: 2404
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 2276
Number of HSP's gapped (non-prelim): 327
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.