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Search of human proteins with 239746275
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746275 PREDICTED: hypothetical protein XP_002343721 [Homo
sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757277 PREDICTED: hypothetical protein [Homo sapiens] 418 e-117
gi|239751780 PREDICTED: hypothetical protein [Homo sapiens] 418 e-117
gi|239746275 PREDICTED: hypothetical protein XP_002343721 [Homo ... 418 e-117
gi|90903231 huntingtin [Homo sapiens] 46 2e-05
gi|13699803 WAS protein family, member 3 [Homo sapiens] 46 2e-05
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 45 4e-05
gi|4758392 forkhead box D1 [Homo sapiens] 45 4e-05
gi|56549694 enabled homolog isoform a [Homo sapiens] 45 5e-05
gi|39930375 enabled homolog isoform b [Homo sapiens] 45 5e-05
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 45 5e-05
gi|60460889 Myb protein P42POP [Homo sapiens] 44 7e-05
gi|52485606 formin-like 2 [Homo sapiens] 44 9e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 44 1e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 44 1e-04
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 43 2e-04
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 43 2e-04
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 43 2e-04
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 43 2e-04
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 43 2e-04
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 43 2e-04
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 43 2e-04
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 43 2e-04
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 43 2e-04
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 43 2e-04
gi|145309324 FH2 domain containing 1 [Homo sapiens] 43 2e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 43 2e-04
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 42 3e-04
gi|40807465 zinc finger protein 341 [Homo sapiens] 42 3e-04
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 42 4e-04
>gi|239757277 PREDICTED: hypothetical protein [Homo sapiens]
Length = 201
Score = 418 bits (1074), Expect = e-117
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MSLQSASECSRQSCRKRAWVRVTRFRSDRRATVCSHSFQPLNQPARMPTWSRNIMVPGLG 60
MSLQSASECSRQSCRKRAWVRVTRFRSDRRATVCSHSFQPLNQPARMPTWSRNIMVPGLG
Sbjct: 1 MSLQSASECSRQSCRKRAWVRVTRFRSDRRATVCSHSFQPLNQPARMPTWSRNIMVPGLG 60
Query: 61 PGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVVGGGGSLLTWGEVLVQPRL 120
PGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVVGGGGSLLTWGEVLVQPRL
Sbjct: 61 PGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVVGGGGSLLTWGEVLVQPRL 120
Query: 121 SNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFWALGFLI 180
SNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFWALGFLI
Sbjct: 121 SNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFWALGFLI 180
Query: 181 ALFSALPLALSDGNGEARSSL 201
ALFSALPLALSDGNGEARSSL
Sbjct: 181 ALFSALPLALSDGNGEARSSL 201
>gi|239751780 PREDICTED: hypothetical protein [Homo sapiens]
Length = 201
Score = 418 bits (1074), Expect = e-117
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MSLQSASECSRQSCRKRAWVRVTRFRSDRRATVCSHSFQPLNQPARMPTWSRNIMVPGLG 60
MSLQSASECSRQSCRKRAWVRVTRFRSDRRATVCSHSFQPLNQPARMPTWSRNIMVPGLG
Sbjct: 1 MSLQSASECSRQSCRKRAWVRVTRFRSDRRATVCSHSFQPLNQPARMPTWSRNIMVPGLG 60
Query: 61 PGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVVGGGGSLLTWGEVLVQPRL 120
PGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVVGGGGSLLTWGEVLVQPRL
Sbjct: 61 PGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVVGGGGSLLTWGEVLVQPRL 120
Query: 121 SNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFWALGFLI 180
SNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFWALGFLI
Sbjct: 121 SNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFWALGFLI 180
Query: 181 ALFSALPLALSDGNGEARSSL 201
ALFSALPLALSDGNGEARSSL
Sbjct: 181 ALFSALPLALSDGNGEARSSL 201
>gi|239746275 PREDICTED: hypothetical protein XP_002343721 [Homo
sapiens]
Length = 201
Score = 418 bits (1074), Expect = e-117
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MSLQSASECSRQSCRKRAWVRVTRFRSDRRATVCSHSFQPLNQPARMPTWSRNIMVPGLG 60
MSLQSASECSRQSCRKRAWVRVTRFRSDRRATVCSHSFQPLNQPARMPTWSRNIMVPGLG
Sbjct: 1 MSLQSASECSRQSCRKRAWVRVTRFRSDRRATVCSHSFQPLNQPARMPTWSRNIMVPGLG 60
Query: 61 PGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVVGGGGSLLTWGEVLVQPRL 120
PGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVVGGGGSLLTWGEVLVQPRL
Sbjct: 61 PGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVVGGGGSLLTWGEVLVQPRL 120
Query: 121 SNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFWALGFLI 180
SNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFWALGFLI
Sbjct: 121 SNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFWALGFLI 180
Query: 181 ALFSALPLALSDGNGEARSSL 201
ALFSALPLALSDGNGEARSSL
Sbjct: 181 ALFSALPLALSDGNGEARSSL 201
>gi|90903231 huntingtin [Homo sapiens]
Length = 3144
Score = 45.8 bits (107), Expect = 2e-05
Identities = 23/51 (45%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 117 QPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPG 167
Q + PP P PPPPP PQ P LP P PPPPPPPG
Sbjct: 34 QQQQQQQPPPPPPPPPPPQLPQP-----PPQAQPLLPQPQPPPPPPPPPPG 79
Score = 38.1 bits (87), Expect = 0.005
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Query: 124 PPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
PP P PPPP L P A + P P P PPPPP P
Sbjct: 43 PPPPPPPPPQLPQPPPQAQPLLPQ-----PQPPPPPPPPPPGP 80
Score = 31.2 bits (69), Expect = 0.62
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 117 QPRLSNSPPRPSPPPPPLGPPQATAAAVAPSR 148
QP L P P PPPPP GP A P +
Sbjct: 61 QPLLPQPQPPPPPPPPPPGPAVAEEPLHRPKK 92
>gi|13699803 WAS protein family, member 3 [Homo sapiens]
Length = 502
Score = 45.8 bits (107), Expect = 2e-05
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 122 NSPPRPSPPPPPLGPPQATAAA-VAPSRARKLPSLL-----PHRPPPPPPP 166
N P +P PPPPP P + A+A +AP+ LP+ + P PPPPPPP
Sbjct: 299 NRPQQPPPPPPPQAPEGSQASAPMAPADYGMLPAQIIEYYNPSGPPPPPPP 349
Score = 35.8 bits (81), Expect = 0.025
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 23/68 (33%)
Query: 123 SPPRPSPPPPPLGPPQATAAAVAPSRARKLP----------SLLPHRP------------ 160
+P P PPPPP P A A V+P + P + PH P
Sbjct: 339 NPSGPPPPPPPPVIPSAQTAFVSPLQMPMQPPFPASASSTHAAPPHPPSTGLLVTAPPPP 398
Query: 161 -PPPPPPG 167
PPPPPPG
Sbjct: 399 GPPPPPPG 406
Score = 35.8 bits (81), Expect = 0.025
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 120 LSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
L +PP P PPPPP GPP ++++ S P R P PP
Sbjct: 391 LVTAPPPPGPPPPPPGPP-GPGSSLSSSPMHGPPVAEAKRQEPAQPP 436
Score = 30.8 bits (68), Expect = 0.81
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Query: 125 PRPSPPP------PPLGPP-QATAAAVAP--SRARKLPSLLPHRPPPPPPP 166
P+P P PP GP QA P + AR + P +PPPPPPP
Sbjct: 260 PQPVTPSYAAGDVPPHGPASQAAEHEYRPPSASARHMALNRPQQPPPPPPP 310
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 45.1 bits (105), Expect = 4e-05
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 109 LTWGEV-LVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLP-HRPPPPPP 165
LT G + +V P + +PP P PPPPP PP A+ ++ + P L P H PP PPP
Sbjct: 207 LTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVK--PQLAPLHLPPIPPP 263
Score = 44.3 bits (103), Expect = 7e-05
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 124 PPRPSPPPPPLGPPQATAAAV--------APSRARKLPSL---LPHRPPPPPPP 166
PP P PPPPPL PP +++ + P LP + +P PPPPPPP
Sbjct: 176 PPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPP 229
Score = 35.8 bits (81), Expect = 0.025
Identities = 28/70 (40%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 102 VGGGGSLLTWGEVLVQPRLSN---SPPRPSPPPPPLGPPQAT--AAAVAPSRARKLPSLL 156
V GG + G PRL N S P P P LG AA AP R +P+
Sbjct: 117 VAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPN-VPAPP 175
Query: 157 PHRPPPPPPP 166
P PPPPPPP
Sbjct: 176 PPTPPPPPPP 185
Score = 34.3 bits (77), Expect = 0.073
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 116 VQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
V+P+L+ P PPP PL PP A + + P PPPP PP
Sbjct: 248 VKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPP 298
Score = 33.9 bits (76), Expect = 0.096
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 16/41 (39%)
Query: 125 PRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPP 165
P P PPPPPL PP A PPPPPP
Sbjct: 2 PVPPPPPPPLPPPPPPLGA----------------PPPPPP 26
Score = 30.4 bits (67), Expect = 1.1
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Query: 118 PRLSNSPPRPS------PPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
P L P P+ P PPP PP A+ + A A LP + PPP P
Sbjct: 273 PGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLP 327
Score = 28.5 bits (62), Expect = 4.0
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 24/45 (53%)
Query: 124 PPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPP--PP 166
PP PPPPPLG P PPPPP PP
Sbjct: 8 PPPLPPPPPPLGAP----------------------PPPPPSAPP 30
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 45.1 bits (105), Expect = 4e-05
Identities = 33/101 (32%), Positives = 39/101 (38%), Gaps = 25/101 (24%)
Query: 124 PPRPSPPP----------------PPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP- 166
PP P PPP PP PP A AA A + A + PH PPPPPPP
Sbjct: 259 PPAPPPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAAAA--AFHPHSPPPPPPPH 316
Query: 167 ------GRLHSGFWALGFLIALFSALPLALSDGNGEARSSL 201
R G+ AL LP + + G S+L
Sbjct: 317 GAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASAL 357
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 44.7 bits (104), Expect = 5e-05
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 124 PPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFW 174
PP P PPPPP P + P LP+ +P PPPPP P SGF+
Sbjct: 331 PPPPGPPPPP---PLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPASGFF 378
Score = 42.7 bits (99), Expect = 2e-04
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 125 PRPSPPPPPL--GPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
P PPPPPL GP QA+ A P P L PPPPPPP
Sbjct: 310 PLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPP 353
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 44.7 bits (104), Expect = 5e-05
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 124 PPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFW 174
PP P PPPPP P + P LP+ +P PPPPP P SGF+
Sbjct: 331 PPPPGPPPPP---PLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPASGFF 378
Score = 42.7 bits (99), Expect = 2e-04
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 125 PRPSPPPPPL--GPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
P PPPPPL GP QA+ A P P L PPPPPPP
Sbjct: 310 PLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPP 353
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 44.7 bits (104), Expect = 5e-05
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 118 PRLSNSPPRPSPPPP--PLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
P L PP + PPP P GPP A+ A +LP+ PPPPPPP
Sbjct: 796 PPLPPPPPSGATPPPIAPTGPPTASPPVPAKEEPEELPAAPGPLPPPPPPP 846
Score = 34.3 bits (77), Expect = 0.073
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 12/54 (22%)
Query: 125 PRPSPPPPPLGPPQATAAAVAPS---------RARKLPSLLPHRP---PPPPPP 166
P PP PP P AT +AP+ A++ P LP P PPPPPP
Sbjct: 792 PEGLPPLPPPPPSGATPPPIAPTGPPTASPPVPAKEEPEELPAAPGPLPPPPPP 845
Score = 32.0 bits (71), Expect = 0.36
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Query: 129 PPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHS 171
PP P+GP T A V P A PS P R PP PPG + S
Sbjct: 636 PPLQPMGPTCPTPAPVPPPEA---PS--PFRAPPFHPPGPMPS 673
Score = 28.9 bits (63), Expect = 3.1
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Query: 117 QPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPP 161
+P + P P PPPPP PP + P P L+P P
Sbjct: 828 EPEELPAAPGPLPPPPPPPPPVPGPVTLPP------PQLVPEGTP 866
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 44.3 bits (103), Expect = 7e-05
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 12/64 (18%)
Query: 118 PRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHSGFWALG 177
PRL+ SPP P+PP PP PP A +P P PPPP PP L + +L
Sbjct: 214 PRLALSPPPPAPPLPP--PPPLAQVAPSP----------PSPPPPPRPPPTLSASDPSLD 261
Query: 178 FLIA 181
FL A
Sbjct: 262 FLRA 265
Score = 35.4 bits (80), Expect = 0.033
Identities = 35/120 (29%), Positives = 45/120 (37%), Gaps = 15/120 (12%)
Query: 54 IMVPGLG-PGSGDGGGE--GQRRHMVPALASC---YLSPEGQGLRTFLGVVATVVGGGGS 107
I+ PG+ PG+G G E P ++C Y+ E + A G S
Sbjct: 119 ILGPGVAAPGAGAGAEEPPAAPSSQPPPPSACPQRYVLSEDRREDRRADTSAHSKAGSSS 178
Query: 108 LLTWGEVLVQPRLSNSP---PRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPP 164
W P+ P R SPPP L P Q A++P P P PPPPP
Sbjct: 179 PEPWARPSCTPQEGGCPRPKERESPPPSALQPVQLPRLALSP------PPPAPPLPPPPP 232
Score = 33.9 bits (76), Expect = 0.096
Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 40/89 (44%)
Query: 118 PRLSNSPPRPSPPPPPLGPP---------------QATAAAVAP---------------- 146
P +P PSPPPPP PP Q TA A+
Sbjct: 232 PLAQVAPSPPSPPPPPRPPPTLSASDPSLDFLRAQQETANAIRELAGTLRQGLAKLSEAL 291
Query: 147 ---------SRARKLPSLLPHRPPPPPPP 166
+ LP LP PPPPPPP
Sbjct: 292 SALLPLLPGTPVDSLPPPLPPPPPPPPPP 320
Score = 31.2 bits (69), Expect = 0.62
Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 25/75 (33%)
Query: 124 PPRPSPPPPPLGPPQATAAAVAPSRARKLPSLL-------------------PHRPPPPP 164
PP P PPP P+ PP A + P + +++ RPPP P
Sbjct: 313 PPPPPPPPRPVLPPPAPKVEITPEPVSVVAAVVDGAVVAARGVIIAPRSEEGAPRPPPAP 372
Query: 165 ------PPGRLHSGF 173
PP + GF
Sbjct: 373 LPPHDSPPHKRRKGF 387
Score = 30.8 bits (68), Expect = 0.81
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 95 LGVVATVVGGGGSLLTWGEVLVQPRLSNSPPRPSPPP-PPLGPPQATAAAVAPSRARK 151
+ VVA VV G +++ V++ PR PRP P P PP P P+R R+
Sbjct: 338 VSVVAAVVDG--AVVAARGVIIAPRSEEGAPRPPPAPLPPHDSPPHKRRKGFPTRKRR 393
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 43.9 bits (102), Expect = 9e-05
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 74 HMVPALASCYLSPEGQGLRTFLGVVATVVGGGGSLLTWGEVLVQPRLSNSPPRPSPPPPP 133
H + + + +G G L VVA+ GS + G V P + + P PPPPP
Sbjct: 473 HELEKQGTIKIQKKGDGDIAILPVVASGTLSMGSEVVAGNS-VGPTMGAASSGPLPPPPP 531
Query: 134 LGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
PP + + P P PPPPPPP
Sbjct: 532 PLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPP 564
Score = 40.8 bits (94), Expect = 8e-04
Identities = 20/52 (38%), Positives = 22/52 (42%)
Query: 116 VQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPG 167
V P + PP P PPPPP PP + P L P P PP PG
Sbjct: 548 VTPPMPPPPPPPPPPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAPPLPG 599
Score = 30.4 bits (67), Expect = 1.1
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 16/47 (34%)
Query: 120 LSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
+ N P P P PPP PP P P PPPPPPP
Sbjct: 543 VQNGPVTP-PMPPPPPPP---------------PPPPPPPPPPPPPP 573
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/98 (32%), Positives = 37/98 (37%), Gaps = 27/98 (27%)
Query: 94 FLGVVATVVGGGGSLLTWGEVLVQPRLSNSPP-----------RPSPPPPPLG------- 135
F G T +GGG + + SN PP +P PPPPP+G
Sbjct: 222 FPGNRGTALGGGS--IRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHR 279
Query: 136 -----PPQATAAAVAPSRARKLPSLLPHRPPPPPPPGR 168
PP PS R PS PPPPPPP R
Sbjct: 280 EAVPPPPPQNNKPPVPSTPR--PSASSQAPPPPPPPSR 315
Score = 35.8 bits (81), Expect = 0.025
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 25/77 (32%)
Query: 117 QPRLSNSPPRPSPPPPPLGPP-----------------------QATAAAVAPSRARKLP 153
+P S+ P P PPP GPP +T +P R+ LP
Sbjct: 299 RPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLP 358
Query: 154 SLLPHRPPPP--PPPGR 168
RPPPP PPGR
Sbjct: 359 PPPSERPPPPVRDPPGR 375
Score = 35.0 bits (79), Expect = 0.043
Identities = 37/135 (27%), Positives = 46/135 (34%), Gaps = 21/135 (15%)
Query: 38 FQPLNQPARMPTWSRNIMVPGLGPGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGV 97
F P + P R P S PG G E QR M P P+ +
Sbjct: 141 FSPPSGPGRFPVPS---------PGHRSGPPEPQRNRMPPPRPDVGSKPDS--------I 183
Query: 98 VATVVGGGGSLLTWGEVLVQPRLSNSPPRPS--PPPPPLGPPQATAAAVAPSRARKLPSL 155
V + + P + P +PS P PPP + TA R L S
Sbjct: 184 PPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSS 243
Query: 156 LP--HRPPPPPPPGR 168
P +RPP PP P R
Sbjct: 244 SPFSNRPPLPPTPSR 258
Score = 33.5 bits (75), Expect = 0.12
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 15/66 (22%)
Query: 123 SPPRPSPPPP----------PLGPPQATAAAVAPSRARKLPSLLPHR-----PPPPPPPG 167
S P P PPP P P + + V R+ P L P R PPPPPP
Sbjct: 376 SGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPST 435
Query: 168 RLHSGF 173
+ +GF
Sbjct: 436 SIRNGF 441
Score = 30.0 bits (66), Expect = 1.4
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 14/50 (28%)
Query: 121 SNSPPRPSP------PPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPP 164
S++PP PSP PPPP P P R P PPPPP
Sbjct: 343 SSTPPLPSPGRSGPLPPPPSERP--------PPPVRDPPGRSGPLPPPPP 384
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/98 (32%), Positives = 37/98 (37%), Gaps = 27/98 (27%)
Query: 94 FLGVVATVVGGGGSLLTWGEVLVQPRLSNSPP-----------RPSPPPPPLG------- 135
F G T +GGG + + SN PP +P PPPPP+G
Sbjct: 222 FPGNRGTALGGGS--IRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHR 279
Query: 136 -----PPQATAAAVAPSRARKLPSLLPHRPPPPPPPGR 168
PP PS R PS PPPPPPP R
Sbjct: 280 EAVPPPPPQNNKPPVPSTPR--PSASSQAPPPPPPPSR 315
Score = 35.8 bits (81), Expect = 0.025
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 25/77 (32%)
Query: 117 QPRLSNSPPRPSPPPPPLGPP-----------------------QATAAAVAPSRARKLP 153
+P S+ P P PPP GPP +T +P R+ LP
Sbjct: 299 RPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLP 358
Query: 154 SLLPHRPPPP--PPPGR 168
RPPPP PPGR
Sbjct: 359 PPPSERPPPPVRDPPGR 375
Score = 35.0 bits (79), Expect = 0.043
Identities = 37/135 (27%), Positives = 46/135 (34%), Gaps = 21/135 (15%)
Query: 38 FQPLNQPARMPTWSRNIMVPGLGPGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGV 97
F P + P R P S PG G E QR M P P+ +
Sbjct: 141 FSPPSGPGRFPVPS---------PGHRSGPPEPQRNRMPPPRPDVGSKPDS--------I 183
Query: 98 VATVVGGGGSLLTWGEVLVQPRLSNSPPRPS--PPPPPLGPPQATAAAVAPSRARKLPSL 155
V + + P + P +PS P PPP + TA R L S
Sbjct: 184 PPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSS 243
Query: 156 LP--HRPPPPPPPGR 168
P +RPP PP P R
Sbjct: 244 SPFSNRPPLPPTPSR 258
Score = 33.5 bits (75), Expect = 0.12
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 15/66 (22%)
Query: 123 SPPRPSPPPP----------PLGPPQATAAAVAPSRARKLPSLLPHR-----PPPPPPPG 167
S P P PPP P P + + V R+ P L P R PPPPPP
Sbjct: 376 SGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPST 435
Query: 168 RLHSGF 173
+ +GF
Sbjct: 436 SIRNGF 441
Score = 30.0 bits (66), Expect = 1.4
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 14/50 (28%)
Query: 121 SNSPPRPSP------PPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPP 164
S++PP PSP PPPP P P R P PPPPP
Sbjct: 343 SSTPPLPSPGRSGPLPPPPSERP--------PPPVRDPPGRSGPLPPPPP 384
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 43.1 bits (100), Expect = 2e-04
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 123 SPPRPSP----PPPPLGPPQATAAAVAPSRARKL----PSLLPHRPPPPPPPGR 168
+PP P P PPPP PP + P+R R PS P PPPPPP R
Sbjct: 276 APPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSR 329
Score = 40.4 bits (93), Expect = 0.001
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 10/63 (15%)
Query: 118 PRLSNSPPRPSPPPPPLGPPQ--ATAAAVAPSRARKLPSLLPHRPP--------PPPPPG 167
P PP P PPP GPP A P + P+ P PP PPPPP
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 168 RLH 170
R++
Sbjct: 341 RMY 343
Score = 39.3 bits (90), Expect = 0.002
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 118 PRLSNSPPRPS-----PPPPPLGPPQATAAAVAPSRAR-KLPSLLPHRPPPPPPP 166
P S PP P+ PPPPP P A PSR +P P+R PPPPP
Sbjct: 294 PHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPP 348
Score = 39.3 bits (90), Expect = 0.002
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 118 PRLSNSPPRPSPPPPPLGP----PQATAAAVAPSRARKLPSLLPHRPPPPPP 165
P S +P PPPPP P P + P LPS P PPPPPP
Sbjct: 312 PPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPP 363
Score = 35.8 bits (81), Expect = 0.025
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 10/65 (15%)
Query: 117 QPRLSNSPPRPS---PPPPPL-------GPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
+P ++ PP P+ PPPPP GPP + + P P PP PPPP
Sbjct: 329 RPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388
Query: 167 GRLHS 171
L S
Sbjct: 389 PGLPS 393
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 43.1 bits (100), Expect = 2e-04
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 116 VQPRLSNSPPRPSPPPPPLGPPQATAAAVAP-------SRARKLPSLLPHRPPPPPPP 166
+ P +PP P PPPPPL P +++ P S + P P PPPPPPP
Sbjct: 1950 ISPSSPETPP-PPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPP 2006
Score = 35.8 bits (81), Expect = 0.025
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 22/51 (43%)
Query: 116 VQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
V L PP P PPPPP PP PPPPPPP
Sbjct: 1986 VSTPLQAPPPTPPPPPPPPPPP----------------------PPPPPPP 2014
Score = 32.3 bits (72), Expect = 0.28
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 22/43 (51%)
Query: 123 SPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPP 165
+PP P PPPPP PP PPPPPP
Sbjct: 1996 TPPPPPPPPPPPPPP----------------------PPPPPP 2016
Score = 31.6 bits (70), Expect = 0.47
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 24/43 (55%)
Query: 124 PPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
PP P PPPPP PP PPPPPPP
Sbjct: 1998 PPPPPPPPPP--PP----------------------PPPPPPP 2016
Score = 31.6 bits (70), Expect = 0.47
Identities = 11/15 (73%), Positives = 11/15 (73%)
Query: 124 PPRPSPPPPPLGPPQ 138
PP P PPPPP PPQ
Sbjct: 2007 PPPPPPPPPPSAPPQ 2021
Score = 31.2 bits (69), Expect = 0.62
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 19/55 (34%)
Query: 112 GEVLVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
G V + +S P P PPP PP P PPPPPPP
Sbjct: 1978 GPVKIPNTVSTPLQAPPPTPPPPPPP-------------------PPPPPPPPPP 2013
Score = 30.8 bits (68), Expect = 0.81
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 124 PPRPSPPPPPLGPPQATAAAVAPSR--ARKLPSLL--PHRPPPPPP 165
PP P PPPPP PP A P PS++ P + P PP
Sbjct: 2003 PPPPPPPPPPPPPPSAPPQVQLPVSLDLPLFPSIMMQPVQHPALPP 2048
Score = 30.4 bits (67), Expect = 1.1
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 16/81 (19%)
Query: 54 IMVPGL-GPGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVVGGGGSLLTWG 112
+++PG+ GP S G + L+P G G+ F L+
Sbjct: 3062 VLLPGMNGPSSLPGFPQNSNT----------LTPPGAGMLGF-----PTSATSSPALSLS 3106
Query: 113 EVLVQPRLSNSPPRPSPPPPP 133
+P L PP P PPPPP
Sbjct: 3107 SAPTKPLLQTPPPPPPPPPPP 3127
Score = 30.0 bits (66), Expect = 1.4
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 26/52 (50%)
Query: 115 LVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
L P + PP P PPPPP PPPPPPP
Sbjct: 1990 LQAPPPTPPPPPPPPPPPP--------------------------PPPPPPP 2015
Score = 29.6 bits (65), Expect = 1.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 124 PPRPSPPPPPLGPPQATA 141
PP P PPPPP PP +A
Sbjct: 2001 PPPPPPPPPPPPPPPPSA 2018
Score = 28.9 bits (63), Expect = 3.1
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 131 PPPLG----PPQATAA-AVAPSRARKLPSLLPHRPPPPPPP 166
PP G P AT++ A++ S A P L PPPPPPP
Sbjct: 3085 PPGAGMLGFPTSATSSPALSLSSAPTKPLLQTPPPPPPPPP 3125
Score = 28.1 bits (61), Expect = 5.2
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 118 PRLSNS--PPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
P+ SN+ PP P + A +++ + + L P PPPPPPP
Sbjct: 3077 PQNSNTLTPPGAGMLGFPTSATSSPALSLSSAPTKPLLQTPPPPPPPPPPP 3127
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/123 (31%), Positives = 48/123 (39%), Gaps = 22/123 (17%)
Query: 43 QPARMPTWSRNIMVPGLGPGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVV 102
Q +P S + PG GPG G G G G PA + Y P G G
Sbjct: 216 QMPTLPPPSVSATGPGPGPGPGPGPGPG------PAPPN-YSRPHGMG------------ 256
Query: 103 GGGGSLLTWGEVLVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162
G ++ G V P + PP P P P GP A AAA + + +P RP P
Sbjct: 257 --GPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGP-MANAAAPTSTPQKLIPPQPTGRPSP 313
Query: 163 PPP 165
PP
Sbjct: 314 APP 316
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/123 (31%), Positives = 48/123 (39%), Gaps = 22/123 (17%)
Query: 43 QPARMPTWSRNIMVPGLGPGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVV 102
Q +P S + PG GPG G G G G PA + Y P G G
Sbjct: 216 QMPTLPPPSVSATGPGPGPGPGPGPGPG------PAPPN-YSRPHGMG------------ 256
Query: 103 GGGGSLLTWGEVLVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162
G ++ G V P + PP P P P GP A AAA + + +P RP P
Sbjct: 257 --GPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGP-MANAAAPTSTPQKLIPPQPTGRPSP 313
Query: 163 PPP 165
PP
Sbjct: 314 APP 316
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/123 (31%), Positives = 48/123 (39%), Gaps = 22/123 (17%)
Query: 43 QPARMPTWSRNIMVPGLGPGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVV 102
Q +P S + PG GPG G G G G PA + Y P G G
Sbjct: 216 QMPTLPPPSVSATGPGPGPGPGPGPGPG------PAPPN-YSRPHGMG------------ 256
Query: 103 GGGGSLLTWGEVLVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162
G ++ G V P + PP P P P GP A AAA + + +P RP P
Sbjct: 257 --GPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGP-MANAAAPTSTPQKLIPPQPTGRPSP 313
Query: 163 PPP 165
PP
Sbjct: 314 APP 316
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/123 (31%), Positives = 48/123 (39%), Gaps = 22/123 (17%)
Query: 43 QPARMPTWSRNIMVPGLGPGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVV 102
Q +P S + PG GPG G G G G PA + Y P G G
Sbjct: 216 QMPTLPPPSVSATGPGPGPGPGPGPGPG------PAPPN-YSRPHGMG------------ 256
Query: 103 GGGGSLLTWGEVLVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162
G ++ G V P + PP P P P GP A AAA + + +P RP P
Sbjct: 257 --GPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGP-MANAAAPTSTPQKLIPPQPTGRPSP 313
Query: 163 PPP 165
PP
Sbjct: 314 APP 316
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/123 (31%), Positives = 48/123 (39%), Gaps = 22/123 (17%)
Query: 43 QPARMPTWSRNIMVPGLGPGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVV 102
Q +P S + PG GPG G G G G PA + Y P G G
Sbjct: 216 QMPTLPPPSVSATGPGPGPGPGPGPGPG------PAPPN-YSRPHGMG------------ 256
Query: 103 GGGGSLLTWGEVLVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162
G ++ G V P + PP P P P GP A AAA + + +P RP P
Sbjct: 257 --GPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGP-MANAAAPTSTPQKLIPPQPTGRPSP 313
Query: 163 PPP 165
PP
Sbjct: 314 APP 316
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/123 (31%), Positives = 48/123 (39%), Gaps = 22/123 (17%)
Query: 43 QPARMPTWSRNIMVPGLGPGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVV 102
Q +P S + PG GPG G G G G PA + Y P G G
Sbjct: 216 QMPTLPPPSVSATGPGPGPGPGPGPGPG------PAPPN-YSRPHGMG------------ 256
Query: 103 GGGGSLLTWGEVLVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162
G ++ G V P + PP P P P GP A AAA + + +P RP P
Sbjct: 257 --GPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGP-MANAAAPTSTPQKLIPPQPTGRPSP 313
Query: 163 PPP 165
PP
Sbjct: 314 APP 316
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/123 (31%), Positives = 48/123 (39%), Gaps = 22/123 (17%)
Query: 43 QPARMPTWSRNIMVPGLGPGSGDGGGEGQRRHMVPALASCYLSPEGQGLRTFLGVVATVV 102
Q +P S + PG GPG G G G G PA + Y P G G
Sbjct: 216 QMPTLPPPSVSATGPGPGPGPGPGPGPG------PAPPN-YSRPHGMG------------ 256
Query: 103 GGGGSLLTWGEVLVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162
G ++ G V P + PP P P P GP A AAA + + +P RP P
Sbjct: 257 --GPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGP-MANAAAPTSTPQKLIPPQPTGRPSP 313
Query: 163 PPP 165
PP
Sbjct: 314 APP 316
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 42.7 bits (99), Expect = 2e-04
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 115 LVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPS----LLPHRPPPPPPP 166
L+ P SN PP + PP P GPP + + PS KLP+ LP P PPPPP
Sbjct: 24 LIHPARSNQPPSRTCPPLP-GPPSRSRS---PSSRLKLPADPPRALPGSPEPPPPP 75
Score = 36.2 bits (82), Expect = 0.019
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Query: 117 QPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLH 170
QP PP P PP P P RA LP PPPPPPP H
Sbjct: 32 QPPSRTCPPLPGPPSRSRSPSSRLKLPADPPRA--LPG--SPEPPPPPPPAAPH 81
Score = 32.3 bits (72), Expect = 0.28
Identities = 26/96 (27%), Positives = 29/96 (30%), Gaps = 42/96 (43%)
Query: 118 PRLSNSPPRPSPPPPPLGP--------------------------PQAT----------- 140
PR P P PPPPP P P T
Sbjct: 62 PRALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSSRGPVGTKPKRPGQGRRA 121
Query: 141 -----AAAVAPSRARKLPSLLPHRPPPPPPPGRLHS 171
+AA A RAR ++ PPPPPP R S
Sbjct: 122 GARMRSAAPASPRARAARAISNQSSPPPPPPSRARS 157
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 42.7 bits (99), Expect = 2e-04
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 115 LVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPS----LLPHRPPPPPPP 166
L+ P SN PP + PP P GPP + + PS KLP+ LP P PPPPP
Sbjct: 24 LIHPARSNQPPSRTCPPLP-GPPSRSRS---PSSRLKLPADPPRALPGSPEPPPPP 75
Score = 36.2 bits (82), Expect = 0.019
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Query: 117 QPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLH 170
QP PP P PP P P RA LP PPPPPPP H
Sbjct: 32 QPPSRTCPPLPGPPSRSRSPSSRLKLPADPPRA--LPG--SPEPPPPPPPAAPH 81
Score = 32.3 bits (72), Expect = 0.28
Identities = 26/96 (27%), Positives = 29/96 (30%), Gaps = 42/96 (43%)
Query: 118 PRLSNSPPRPSPPPPPLGP--------------------------PQAT----------- 140
PR P P PPPPP P P T
Sbjct: 62 PRALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSSRGPVGTKPKRPGQGRRA 121
Query: 141 -----AAAVAPSRARKLPSLLPHRPPPPPPPGRLHS 171
+AA A RAR ++ PPPPPP R S
Sbjct: 122 GARMRSAAPASPRARAARAISNQSSPPPPPPSRARS 157
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 42.7 bits (99), Expect = 2e-04
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 123 SPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPP-PPPPPG 167
+PP P PPPPP P + S P LP PP PPPPPG
Sbjct: 33 APPPPPPPPPPSPPCSCSREECPSSPPPPPPPPLPGEPPIPPPPPG 78
Score = 39.3 bits (90), Expect = 0.002
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Query: 125 PRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
P P+PPPPP PP + + + P PPPPPPP
Sbjct: 30 PPPAPPPPPPPPPPSPPCSCSREEC-------PSSPPPPPPP 64
Score = 27.7 bits (60), Expect = 6.9
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 125 PRP-SPPPPPLGPPQATAA--AVAPSRARKLPSLLPHRPPPPPPPGRLHS 171
PRP SP P PP + ++ PS R+L + L P P + HS
Sbjct: 521 PRPISPSSPSYRPPNTRRSRLSLGPSADRELLTFLESSTGSPEEPNKFHS 570
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 42.7 bits (99), Expect = 2e-04
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 118 PRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLH 170
P+ N P RP PP P GPP P + P+ P PPPPP GR H
Sbjct: 251 PQEGNKPQRPPPPGRPQGPPPPGGN---PQQPLPPPAGKPQGPPPPPQGGRPH 300
Score = 34.3 bits (77), Expect = 0.073
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 124 PPRPSPP--PPPLGPPQATAAAVAPSRARKLPSLLPHRPP-PPPPPGR 168
PPRP P PPP G Q+ P + PS ++P PPP PG+
Sbjct: 198 PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGK 245
Score = 33.1 bits (74), Expect = 0.16
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 124 PPRPSPP--PPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGR 168
PPRP P PP G + P + + P ++P PPPPGR
Sbjct: 219 PPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGR 265
Score = 32.3 bits (72), Expect = 0.28
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
Query: 117 QPRLSNSPP-----RPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPG 167
+P PP +P PPP G PQ R P P RP PPPPG
Sbjct: 221 RPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPP---PGRPQGPPPPG 273
Score = 29.3 bits (64), Expect = 2.4
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 124 PPRPSPP--PPPLGPPQATAAAVAPSRARKLPSLLPHRPP-PPPPPGR 168
PPRP P PPP G Q+ P + P ++ PPP PG+
Sbjct: 72 PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGK 119
Score = 28.9 bits (63), Expect = 3.1
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 9/53 (16%)
Query: 117 QPRLSNSPPRPSPPP--PPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPG 167
+P+ N P R PPP P PPQ + P P +P PPP G
Sbjct: 40 RPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPR-------PGKPEGPPPQG 85
Score = 28.9 bits (63), Expect = 3.1
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 19/56 (33%)
Query: 124 PPRPSPP--PPPLGPPQATAAAVAPSRARKLPSLLPHRPP---------PPPPPGR 168
PPRP P PPP G Q+ P + P PP PPP PG+
Sbjct: 114 PPRPGKPEGPPPQGGNQSQGPPPRPGK--------PEGPPPQGGNQSQGPPPRPGK 161
Score = 28.9 bits (63), Expect = 3.1
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 19/56 (33%)
Query: 124 PPRPSPP--PPPLGPPQATAAAVAPSRARKLPSLLPHRPP---------PPPPPGR 168
PPRP P PPP G Q+ P + P PP PPP PG+
Sbjct: 135 PPRPGKPEGPPPQGGNQSQGPPPRPGK--------PEGPPPQGGNQSQGPPPHPGK 182
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 42.4 bits (98), Expect = 3e-04
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 115 LVQPRLSNSPPRPSPPPPPLGPPQATA--AAVAPSRARKLPSLLPHRPPPPPPP 166
+++ +L P P+ PPP P+A A A APSR R+ RPPPPPPP
Sbjct: 1 MLRMKLPLKPTHPAEPPPEAEEPEADARPGAKAPSRRRR-----DCRPPPPPPP 49
Score = 30.8 bits (68), Expect = 0.81
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 18/41 (43%)
Query: 127 PSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPG 167
P PPPPP GP + PPPPPP G
Sbjct: 44 PPPPPPPAGPSRGPL------------------PPPPPPRG 66
Score = 28.1 bits (61), Expect = 5.2
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 121 SNSPPRPSPPPPPLGPPQATAAA 143
S P P PPP LGPP A AA
Sbjct: 54 SRGPLPPPPPPRGLGPPVAGGAA 76
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 42.4 bits (98), Expect = 3e-04
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 25/77 (32%)
Query: 118 PRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPP-----PPGRLHSG 172
P PP P PPPPPL PP P +PPPPP PPGR + G
Sbjct: 172 PSYLTQPPPPPPPPPPLPPPP------------------PPQPPPPPPQSLGPPGRPNPG 213
Query: 173 FWALGFLIALFSALPLA 189
G + +A PLA
Sbjct: 214 --GNGVVEVYSAAAPLA 228
Score = 33.1 bits (74), Expect = 0.16
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 131 PPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
P P GPP ++ +PS L PPPPPPP
Sbjct: 154 PMPQGPPPVQSSL----NMHSVPSYLTQPPPPPPPP 185
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 42.0 bits (97), Expect = 4e-04
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 118 PRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
P +P SP PPP PP +A + + RA + P PPPPPPP
Sbjct: 311 PATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPP 359
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/43 (44%), Positives = 22/43 (51%)
Query: 124 PPRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPP 166
PP P PPPPP QA A P+ + P +L PPP PP
Sbjct: 350 PPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPP 392
Score = 37.0 bits (84), Expect = 0.011
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 125 PRPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPPPPPPGRLHS 171
P P PPPPPL +T++ A + P P PPPPPP L +
Sbjct: 322 PTPPPPPPPLPSALSTSSLRASMTSTPPP---PVPPPPPPPATALQA 365
Score = 34.7 bits (78), Expect = 0.056
Identities = 24/60 (40%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 109 LTWGEVLVQPRLSNSPPRPSPPPPPLGPPQATAAAVAPSRARKLPSLL--PHRPPPPPPP 166
L GEV P PP P P P P TA A PS PS PH P PP P
Sbjct: 415 LPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSP 474
Score = 34.3 bits (77), Expect = 0.073
Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
Query: 127 PSPPP--PPL---GPPQATAAAVA------PSRARKLPSLLPHRPPPP-PPPG 167
P+PPP PPL PP A AA V P ++ L P PPPP PPPG
Sbjct: 384 PAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPG 436
Score = 29.3 bits (64), Expect = 2.4
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 14/63 (22%)
Query: 117 QPRLSNSPPRPSPPPPPLGP------PQATAAAV--------APSRARKLPSLLPHRPPP 162
+ R+ P P PPPP G P ++A +P+ R + P PPP
Sbjct: 268 EERVLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPP 327
Query: 163 PPP 165
PPP
Sbjct: 328 PPP 330
Score = 28.5 bits (62), Expect = 4.0
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 15/56 (26%)
Query: 126 RPSPPPPPLGPPQATAAAVAPSRARKLPSLLPHRP---------------PPPPPP 166
RP PPPP A A P+ L+ +RP PPPPPP
Sbjct: 274 RPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPP 329
Score = 28.1 bits (61), Expect = 5.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 147 SRARKLPSLLPHRPPPPPP 165
+RA + + PH PPPPPP
Sbjct: 265 TRAEERVLVRPHEPPPPPP 283
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,301,822
Number of Sequences: 37866
Number of extensions: 942073
Number of successful extensions: 26091
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 872
Number of HSP's that attempted gapping in prelim test: 10353
Number of HSP's gapped (non-prelim): 9868
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.