Guide to the Human Genome
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Name: FAM157C Sequence: fasta or formatted (387aa) NCBI GI: 239745655
Description:

PREDICTED: family with sequence similarity 157, member C

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         28           2
 C cysteine            1.8          7           1
 D aspartate           2.8         11           1
 E glutamate           3.4         13           1
 F phenylalanine       3.4         13           2
 G glycine             8.3         32           3
 H histidine           3.4         13           1
 I isoleucine          3.1         12           1
 K lysine              4.7         18           2
 L leucine             8.0         31           3
 M methionine          2.1          8           1
 N asparagine          2.1          8           1
 P proline            10.3         40           4
 Q glutamine           9.6         37          16
 R arginine           10.3         40           3
 S serine              7.0         27           2
 T threonine           5.4         21           2
 V valine              4.1         16           1
 W tryptophan          2.1          8           1
 Y tyrosine            1.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: family with sequence similarity 157, mem... 
FAM157B               0.951   family with sequence similarity 157, member B [Homo...
FAM157A               0.944   family with sequence similarity 157, member A [Homo...
LOC100132858          0.943   PREDICTED: similar to family with sequence similari...
MED12                 0.027   mediator complex subunit 12 
MAML3                 0.027   mastermind-like 3 
FOXP2                 0.024   forkhead box P2 isoform I 
FOXP2                 0.024   forkhead box P2 isoform III 
FOXP2                 0.024   forkhead box P2 isoform II 
MLL2                  0.023   myeloid/lymphoid or mixed-lineage leukemia 2 
ZFHX3                 0.023   AT-binding transcription factor 1 
DENND4B               0.023   DENN/MADD domain containing 4B 
TBP                   0.022   TATA box binding protein 
MAML2                 0.022   mastermind-like 2 
AR                    0.022   androgen receptor isoform 1 
MN1                   0.020   meningioma  1 
THAP11                0.020   THAP domain containing 11 
VEZF1                 0.020   zinc finger protein 161 
NCOA6                 0.019   nuclear receptor coactivator 6 
FRMPD3                0.019   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.019   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.019   PREDICTED: FERM and PDZ domain containing 3 
SMARCA2               0.019   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.019   SWI/SNF-related matrix-associated actin-dependent re...
EP400                 0.019   E1A binding protein p400 
POLG                  0.019   DNA-directed DNA polymerase gamma 
POLG                  0.019   DNA-directed DNA polymerase gamma 
MESP2                 0.019   mesoderm posterior 2 homolog 
NFAT5                 0.019   nuclear factor of activated T-cells 5 isoform a [Hom...
NFAT5                 0.019   nuclear factor of activated T-cells 5 isoform c [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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