LOC100287254 18380

Name: LOC100287254	Sequence: fasta or formatted (513aa)		NCBI GI: 239745376
Description: PREDICTED: hypothetical protein XP_002343484		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 16.6 85 4 C cysteine 1.2 6 1 D aspartate 1.8 9 1 E glutamate 3.1 16 1 F phenylalanine 1.6 8 1 G glycine 13.8 71 2 H histidine 4.1 21 3 I isoleucine 0.8 4 1 K lysine 1.8 9 1 L leucine 8.6 44 2 M methionine 1.6 8 2 N asparagine 0.6 3 1 P proline 9.7 50 5 Q glutamine 5.7 29 2 R arginine 12.3 63 3 S serine 4.7 24 2 T threonine 2.9 15 1 V valine 7.0 36 2 W tryptophan 1.9 10 1 Y tyrosine 0.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343484 LOC100293327 1.000 PREDICTED: hypothetical protein LOC100291252 1.000 PREDICTED: hypothetical protein XP_002347634 COL1A2 0.030 alpha 2 type I collagen TAF4 0.024 TBP-associated factor 4 COL24A1 0.023 collagen, type XXIV, alpha 1 COL5A2 0.020 alpha 2 type V collagen preproprotein LOC100290946 0.020 PREDICTED: hypothetical protein XP_002347121 LOC100288840 0.020 PREDICTED: hypothetical protein XP_002344246 C2orf55 0.020 hypothetical protein LOC343990 COL2A1 0.020 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.020 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL1A1 0.019 alpha 1 type I collagen preproprotein FLJ22184 0.019 PREDICTED: hypothetical protein LOC80164 COL11A2 0.019 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.019 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.019 collagen, type XI, alpha 2 isoform 1 preproprotein ... BHLHE41 0.019 basic helix-loop-helix domain containing, class B, 3... LOC100291129 0.018 PREDICTED: hypothetical protein XP_002347815 LOC728767 0.018 PREDICTED: hypothetical protein LOC728767 0.018 PREDICTED: hypothetical protein DACT3 0.018 thymus expressed gene 3-like LOC728317 0.018 PREDICTED: hypothetical protein LOC728317 0.018 PREDICTED: hypothetical protein LOC728317 0.018 PREDICTED: hypothetical protein LOC728307 0.018 PREDICTED: hypothetical protein SOX1 0.017 SRY (sex determining region Y)-box 1 LOC100293375 0.017 PREDICTED: hypothetical protein LOC100291076 0.017 PREDICTED: hypothetical protein XP_002347846 SAMD1 0.017 sterile alpha motif domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.