LOC728317 1336

Name: LOC728317	Sequence: fasta or formatted (2028aa)		NCBI GI: 113430177
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt prot {2061aa} PREDICTED: hypothetical protein alt prot {2061aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.4 272 3 C cysteine 1.9 38 1 D aspartate 4.9 99 3 E glutamate 2.8 56 3 F phenylalanine 1.0 20 1 G glycine 9.3 188 3 H histidine 2.8 56 2 I isoleucine 4.7 96 2 K lysine 4.5 91 2 L leucine 7.4 150 3 M methionine 1.1 22 1 N asparagine 1.2 24 1 P proline 10.0 202 2 Q glutamine 2.1 43 1 R arginine 10.9 222 2 S serine 9.3 189 3 T threonine 7.5 153 2 V valine 3.0 60 2 W tryptophan 1.2 24 1 Y tyrosine 1.1 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC728317 0.993 PREDICTED: hypothetical protein LOC728317 0.991 PREDICTED: hypothetical protein LOC728307 0.771 PREDICTED: hypothetical protein MUM1 0.077 melanoma ubiquitous mutated protein MUM1L1 0.071 melanoma associated antigen (mutated) 1-like 1 [Homo... SRRM2 0.022 splicing coactivator subunit SRm300 NACA 0.016 nascent polypeptide-associated complex alpha subuni... MUC12 0.014 PREDICTED: mucin 12 LOC100133756 0.014 PREDICTED: hypothetical protein, partial MUC5B 0.012 mucin 5, subtype B, tracheobronchial IRS2 0.011 insulin receptor substrate 2 SRCAP 0.010 Snf2-related CBP activator protein MUC5AC 0.010 mucin 5AC LOC100130716 0.010 PREDICTED: similar to mucin 11 COL3A1 0.010 collagen type III alpha 1 preproprotein MUC12 0.010 PREDICTED: mucin 12, cell surface associated FLJ22184 0.010 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.009 PREDICTED: hypothetical protein FLJ22184 LOC100133714 0.009 PREDICTED: similar to Mucin-12, partial MUC12 0.009 PREDICTED: mucin 12 MUC6 0.009 mucin 6, gastric COL27A1 0.008 collagen, type XXVII, alpha 1 COL2A1 0.007 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.007 collagen, type II, alpha 1 isoform 2 precursor [Hom... LOC100130716 0.007 PREDICTED: similar to Mucin-12 TPRX1 0.007 tetra-peptide repeat homeobox MDC1 0.007 mediator of DNA-damage checkpoint 1 LOC100293409 0.007 PREDICTED: similar to Mucin-19 LOC100291118 0.007 PREDICTED: hypothetical protein XP_002347351 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.