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Search of human proteins with 239745297
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens]
(131 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens] 270 2e-73
gi|239745266 PREDICTED: similar to cis-Golgi matrix protein GM13... 269 5e-73
gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo sa... 263 3e-71
gi|239745289 PREDICTED: hypothetical protein XP_002343419 isofor... 263 3e-71
gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo sa... 150 4e-37
gi|239745291 PREDICTED: hypothetical protein XP_002343418 isofor... 150 4e-37
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi... 112 8e-26
gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens] 106 5e-24
gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens] 106 5e-24
gi|239756397 PREDICTED: similar to hCG27445 [Homo sapiens] 99 7e-22
gi|239750924 PREDICTED: similar to Putative golgin subfamily A m... 99 9e-22
gi|239745322 PREDICTED: similar to Putative golgin subfamily A m... 99 9e-22
gi|13487904 golgi autoantigen, golgin subfamily a, 2-like 1 [Hom... 70 6e-13
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap... 69 1e-12
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi... 69 1e-12
gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Hom... 67 5e-12
gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sap... 64 3e-11
gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo sapi... 63 6e-11
gi|60218906 golgi autoantigen, golgin subfamily a, 8F [Homo sapi... 55 2e-08
gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-l... 54 5e-08
gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo s... 52 1e-07
gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-l... 52 2e-07
gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo s... 51 2e-07
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l... 50 7e-07
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l... 50 7e-07
gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein... 50 7e-07
gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein... 50 7e-07
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l... 49 1e-06
gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-l... 49 1e-06
gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-l... 47 4e-06
>gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens]
Length = 131
Score = 270 bits (690), Expect = 2e-73
Identities = 131/131 (100%), Positives = 131/131 (100%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES
Sbjct: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL
Sbjct: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
Query: 121 VGDHKEGHGKF 131
VGDHKEGHGKF
Sbjct: 121 VGDHKEGHGKF 131
>gi|239745266 PREDICTED: similar to cis-Golgi matrix protein GM130
[Homo sapiens]
Length = 131
Score = 269 bits (687), Expect = 5e-73
Identities = 130/131 (99%), Positives = 131/131 (100%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MPNIPGDLESREAMVAFFNSAGA+AQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES
Sbjct: 1 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL
Sbjct: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
Query: 121 VGDHKEGHGKF 131
VGDHKEGHGKF
Sbjct: 121 VGDHKEGHGKF 131
>gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo
sapiens]
Length = 230
Score = 263 bits (672), Expect = 3e-71
Identities = 127/131 (96%), Positives = 130/131 (99%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MPNIPGDLESREAMVAFFNSAGA+AQEEQRVCCQPLAHPVASSQKKPEVAAPAPE+GGES
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGES 159
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
V GETH+ALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL
Sbjct: 160 VCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 219
Query: 121 VGDHKEGHGKF 131
VGDHKEGHGKF
Sbjct: 220 VGDHKEGHGKF 230
>gi|239745289 PREDICTED: hypothetical protein XP_002343419 isoform 2
[Homo sapiens]
Length = 230
Score = 263 bits (672), Expect = 3e-71
Identities = 127/131 (96%), Positives = 130/131 (99%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MPNIPGDLESREAMVAFFNSAGA+AQEEQRVCCQPLAHPVASSQKKPEVAAPAPE+GGES
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGES 159
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
V GETH+ALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL
Sbjct: 160 VCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 219
Query: 121 VGDHKEGHGKF 131
VGDHKEGHGKF
Sbjct: 220 VGDHKEGHGKF 230
>gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo
sapiens]
Length = 185
Score = 150 bits (378), Expect = 4e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MPNIPGDLESREAMVAFFNSAGA+AQEEQRVCCQPLAHPVASSQKKPEVAAPAPE+GGES
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGES 159
Query: 61 VFGETHRALQGAMEKLQ 77
V GETH+ALQGAMEKLQ
Sbjct: 160 VCGETHQALQGAMEKLQ 176
>gi|239745291 PREDICTED: hypothetical protein XP_002343418 isoform 1
[Homo sapiens]
Length = 185
Score = 150 bits (378), Expect = 4e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MPNIPGDLESREAMVAFFNSAGA+AQEEQRVCCQPLAHPVASSQKKPEVAAPAPE+GGES
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGES 159
Query: 61 VFGETHRALQGAMEKLQ 77
V GETH+ALQGAMEKLQ
Sbjct: 160 VCGETHQALQGAMEKLQ 176
>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
sapiens]
Length = 1002
Score = 112 bits (280), Expect = 8e-26
Identities = 61/87 (70%), Positives = 69/87 (79%), Gaps = 10/87 (11%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQ----------RVCCQPLAHPVASSQKKPEVA 50
MP+IP DLESREAMVAFFNSA ASA+EEQ RV C+ LAH +AS+QK+PE A
Sbjct: 723 MPSIPEDLESREAMVAFFNSAVASAEEEQARLRGQLKEQRVRCRRLAHLLASAQKEPEAA 782
Query: 51 APAPESGGESVFGETHRALQGAMEKLQ 77
APAP +GG+SV GETHRALQGAMEKLQ
Sbjct: 783 APAPGTGGDSVCGETHRALQGAMEKLQ 809
>gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens]
Length = 421
Score = 106 bits (265), Expect = 5e-24
Identities = 79/186 (42%), Positives = 91/186 (48%), Gaps = 55/186 (29%)
Query: 1 MPNIPGDLESREAM---------------------------------VAFFNSAGASAQE 27
MPNIPGDLESRE + VAFFNSAG SAQE
Sbjct: 144 MPNIPGDLESRETVTPLCSWFPRLLISVDFHSFREPVIRHHFTCDQQVAFFNSAGTSAQE 203
Query: 28 EQRVCCQPLAHPVASSQKKPEVAAPAPESGGESV-FGETHRA---LQGAMEKLQES---T 80
EQR+CCQPLAHPVASSQKKPE AAPAP +GGESV F + + L+ +EKL+
Sbjct: 204 EQRMCCQPLAHPVASSQKKPEAAAPAPGTGGESVDFMDLLKEKVDLREWVEKLKLQFIHL 263
Query: 81 SARGQCQRRSTGRGGHRQAGPGPGGDEGEP---------------AGAAGQVLQLVGDHK 125
S + R+ G + P E E GQVL+LV DH
Sbjct: 264 SGKTDTMRKYITPYGSQGTVPKMRHREEEEIVRLAQDREEMKVNLLEMQGQVLRLVRDHN 323
Query: 126 EGHGKF 131
EGHGKF
Sbjct: 324 EGHGKF 329
>gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens]
Length = 421
Score = 106 bits (265), Expect = 5e-24
Identities = 79/186 (42%), Positives = 91/186 (48%), Gaps = 55/186 (29%)
Query: 1 MPNIPGDLESREAM---------------------------------VAFFNSAGASAQE 27
MPNIPGDLESRE + VAFFNSAG SAQE
Sbjct: 144 MPNIPGDLESRETVTPLCSWFPRFLISVDFHSFREPVIRHHFTCDQQVAFFNSAGTSAQE 203
Query: 28 EQRVCCQPLAHPVASSQKKPEVAAPAPESGGESV-FGETHRA---LQGAMEKLQES---T 80
EQR+CCQPLAHPVASSQKKPE AAPAP +GGESV F + + L+ +EKL+
Sbjct: 204 EQRMCCQPLAHPVASSQKKPEAAAPAPGTGGESVDFMDLLKEKVDLREWVEKLKLQFIHL 263
Query: 81 SARGQCQRRSTGRGGHRQAGPGPGGDEGEP---------------AGAAGQVLQLVGDHK 125
S + R+ G + P E E GQVL+LV DH
Sbjct: 264 SGKTDTMRKYITPYGSQGTVPKMRHREEEEIVRLAQDREEMKVNLLEMQGQVLRLVRDHN 323
Query: 126 EGHGKF 131
EGHGKF
Sbjct: 324 EGHGKF 329
>gi|239756397 PREDICTED: similar to hCG27445 [Homo sapiens]
Length = 212
Score = 99.4 bits (246), Expect = 7e-22
Identities = 60/119 (50%), Positives = 70/119 (58%), Gaps = 19/119 (15%)
Query: 15 VAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGESVFGETHRALQGAME 74
VAFFNSAG SAQEEQR+CCQPLAHPVASSQKKPE AAPAP +GG+ + T QG +
Sbjct: 18 VAFFNSAGTSAQEEQRMCCQPLAHPVASSQKKPEAAAPAPGTGGKYI---TPYGSQGTVS 74
Query: 75 KL--QESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
K+ +E Q R + + GQVL+LV DH EGHGKF
Sbjct: 75 KMRHREEEEIVRLAQDREEMKVNLLE--------------MQGQVLRLVRDHNEGHGKF 119
>gi|239750924 PREDICTED: similar to Putative golgin subfamily A
member 2-like protein 5 [Homo sapiens]
Length = 110
Score = 99.0 bits (245), Expect = 9e-22
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 11/98 (11%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQ-----------RVCCQPLAHPVASSQKKPEV 49
MP+I DL+SREAMVAF NSA SA+EEQ RVCCQ LAHPVA +QK+PE
Sbjct: 1 MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
Query: 50 AAPAPESGGESVFGETHRALQGAMEKLQESTSARGQCQ 87
AAP P +GG+S GETHRA++ KL S+ CQ
Sbjct: 61 AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQ 98
>gi|239745322 PREDICTED: similar to Putative golgin subfamily A
member 2-like protein 5 [Homo sapiens]
Length = 110
Score = 99.0 bits (245), Expect = 9e-22
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 11/98 (11%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQ-----------RVCCQPLAHPVASSQKKPEV 49
MP+I DL+SREAMVAF NSA SA+EEQ RVCCQ LAHPVA +QK+PE
Sbjct: 1 MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
Query: 50 AAPAPESGGESVFGETHRALQGAMEKLQESTSARGQCQ 87
AAP P +GG+S GETHRA++ KL S+ CQ
Sbjct: 61 AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQ 98
>gi|13487904 golgi autoantigen, golgin subfamily a, 2-like 1 [Homo
sapiens]
Length = 144
Score = 69.7 bits (169), Expect = 6e-13
Identities = 49/121 (40%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASS-------QKKPEVAAPA 53
MP+IP DLES++AMVAFFNSA ASA+EEQ C L AS+ ++ P
Sbjct: 13 MPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPRRNLRQQPQ 72
Query: 54 P-ESGGESVFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAG 112
P E G G R +G + + + G G H+QAGPG G EGE AG
Sbjct: 73 PQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEGGGVHQQAGPGQGRGEGEAAG 132
Query: 113 A 113
A
Sbjct: 133 A 133
>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
sapiens]
Length = 603
Score = 68.6 bits (166), Expect = 1e-12
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 40 VASSQKKPEVAAPAPESGGESV--------------------FGETHRALQGAMEKLQES 79
+ S++K+PE A PA +GGES G + +K+
Sbjct: 397 LTSAEKEPEAAVPASGTGGESSGLMDLLEEKADLREHVEKLELGFIQYRRERCHQKVHRL 456
Query: 80 TSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
+ G + ++ GGH QAGPG GG+EGE AGAAG + G + EGHGKF
Sbjct: 457 LTEPGDSAKDASPGGGHHQAGPGQGGEEGEAAGAAGDGVAACGSYSEGHGKF 508
>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
sapiens]
Length = 603
Score = 68.6 bits (166), Expect = 1e-12
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 40 VASSQKKPEVAAPAPESGGESV--------------------FGETHRALQGAMEKLQES 79
+ S++K+PE A PA +GGES G + +K+
Sbjct: 397 LTSAEKEPEAAVPASGTGGESSGLMDLLEEKADLREHVEKLELGFIQYRRERCHQKVHRL 456
Query: 80 TSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
+ G + ++ GGH QAGPG GG+EGE AGAAG + G + EGHGKF
Sbjct: 457 LTEPGDSAKDASPGGGHHQAGPGQGGEEGEAAGAAGDGVAACGSYSEGHGKF 508
>gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Homo
sapiens]
Length = 314
Score = 66.6 bits (161), Expect = 5e-12
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 20/112 (17%)
Query: 40 VASSQKKPEVAAPAPESGGESV--------------------FGETHRALQGAMEKLQES 79
+ S++K+PE A PA +GGES G + +K+
Sbjct: 109 LTSAEKEPEAAVPASGTGGESSGLMDLLEEKVDLREHVEKLELGFIQYRRERCHQKVHRL 168
Query: 80 TSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
+ G + ++ GGH QAGPG GG+EGE GAAG + G + EGHGKF
Sbjct: 169 LTEPGDSAKDASPGGGHHQAGPGRGGEEGEAVGAAGDGVAACGSYSEGHGKF 220
>gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo
sapiens]
Length = 430
Score = 64.3 bits (155), Expect = 3e-11
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 27/131 (20%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MP++P DLESREAM F + A + V +K E+
Sbjct: 238 MPSVPEDLESREAMSGFMDHLEEKADLSELV-------------EKEELG---------- 274
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
F + +R + +K+ + G + + GGH QAGPG GGDEGE AGAAG +
Sbjct: 275 -FFQYYR--ERCHQKVYHPITKPGGSAKDAAPGGGHHQAGPGQGGDEGEAAGAAGDGVAA 331
Query: 121 VGDHKEGHGKF 131
GD+K GH KF
Sbjct: 332 GGDYK-GHSKF 341
>gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo
sapiens]
Length = 434
Score = 63.2 bits (152), Expect = 6e-11
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 27/131 (20%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
+P+IP DLESREAM F + A + V +K E+
Sbjct: 242 IPSIPQDLESREAMSGFMDHLEEKADLSELV-------------EKEELG---------- 278
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
F + +R + +K+ + G + + GGH QAGPG GGDEGE AGAAG +
Sbjct: 279 -FFQYYR--ERCHQKVYHPITKPGGSAKDAAPGGGHHQAGPGQGGDEGEAAGAAGDGVAA 335
Query: 121 VGDHKEGHGKF 131
GD+K GH KF
Sbjct: 336 GGDYK-GHSKF 345
>gi|60218906 golgi autoantigen, golgin subfamily a, 8F [Homo
sapiens]
Length = 283
Score = 55.1 bits (131), Expect = 2e-08
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 74 EKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
+K+ + G + + GGH QAGPG GGDEGE AGAAG + GD+K GH KF
Sbjct: 138 QKVYHPITKPGGSAKDAAPGGGHHQAGPGQGGDEGEAAGAAGDGVAAGGDYK-GHSKF 194
>gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 630
Score = 53.5 bits (127), Expect = 5e-08
Identities = 41/131 (31%), Positives = 53/131 (40%), Gaps = 28/131 (21%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MP++P DLESREAM +F + A + V K E+
Sbjct: 442 MPSVPEDLESREAMSSFMDHLKEKADLSELV--------------KKELCF--------- 478
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
H +K S G C + + GGH QAG GGDEGE AGAA +
Sbjct: 479 ----IHHWRDRRHQKTHHLLSEPGGCAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 533
Query: 121 VGDHKEGHGKF 131
++ GH KF
Sbjct: 534 YSNYNNGHRKF 544
>gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo
sapiens]
Length = 1052
Score = 52.4 bits (124), Expect = 1e-07
Identities = 41/131 (31%), Positives = 54/131 (41%), Gaps = 27/131 (20%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MP++P DLESREAM +F + A + V KK E+
Sbjct: 485 MPSVPEDLESREAMSSFMDQLEEKADLSELV-------------KKKELCF--------- 522
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
H +K+ S G + + GGH QAG GGDEGE AGAA +
Sbjct: 523 ----IHHWRDRCHQKIHHLLSEPGGRAKDAALVGGHHQAG-AQGGDEGEAAGAAADGVAA 577
Query: 121 VGDHKEGHGKF 131
++ GH KF
Sbjct: 578 YSNYNNGHRKF 588
>gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 3 [Homo sapiens]
Length = 601
Score = 51.6 bits (122), Expect = 2e-07
Identities = 43/129 (33%), Positives = 57/129 (44%), Gaps = 25/129 (19%)
Query: 26 QEEQRVCCQPLAHPVASSQKKPEVAAP--APESGGESVFGETHRALQGAMEKLQESTSAR 83
+E Q + LAH VAS+QK+PE A AP GGES H + + +L + R
Sbjct: 389 KELQEKLGKRLAHLVASAQKEPEAARGPGAPGPGGESSSFMDHLEEKADLSELVKKQELR 448
Query: 84 ---------------------GQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVG 122
G+ + + G GGH QAG GGDE E AGAA +
Sbjct: 449 FIQYWQERCHQKIHHLLSEPGGRAKDAALG-GGHHQAG-AQGGDEDEAAGAAADGIAAYS 506
Query: 123 DHKEGHGKF 131
++ GH KF
Sbjct: 507 NYNNGHRKF 515
>gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo
sapiens]
Length = 1102
Score = 51.2 bits (121), Expect = 2e-07
Identities = 41/115 (35%), Positives = 53/115 (46%), Gaps = 23/115 (20%)
Query: 39 PVASSQKKPEVAAP--APESGGESVFGETHRALQGAMEKLQESTSA------RGQCQRR- 89
PVAS+QK+PE A AP GGES H + + +L + R +C ++
Sbjct: 525 PVASAQKEPEAARGPGAPGPGGESSSFMDHLEEKADLSELVKKKELCFIHHWRDRCHQKI 584
Query: 90 ------STGR-------GGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
GR GGH QAG GGDEGE AGAA + ++ GH KF
Sbjct: 585 HHLLSEPGGRAKDAALVGGHHQAG-AQGGDEGEAAGAAADGVAAYSNYNNGHRKF 638
>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 49.7 bits (117), Expect = 7e-07
Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 27/131 (20%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MP++P DLESREAM +F + A + V Q L ++
Sbjct: 443 MPSVPEDLESREAMSSFMDHLKEKADLSELVKKQELRFIQYWQER--------------- 487
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
+K+ S G + + GGH QAG GGDEGE AGAA +
Sbjct: 488 -----------CHQKIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 535
Query: 121 VGDHKEGHGKF 131
++ GH KF
Sbjct: 536 YSNYNNGHRKF 546
>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 4 [Homo sapiens]
Length = 632
Score = 49.7 bits (117), Expect = 7e-07
Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 27/131 (20%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MP++P DLESREAM +F + A + V Q L ++
Sbjct: 443 MPSVPEDLESREAMSSFMDHLKEKADLSELVKKQELRFIQYWQER--------------- 487
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
+K+ S G + + GGH QAG GGDEGE AGAA +
Sbjct: 488 -----------CHQKIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 535
Query: 121 VGDHKEGHGKF 131
++ GH KF
Sbjct: 536 YSNYNNGHRKF 546
>gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein 3
[Homo sapiens]
Length = 580
Score = 49.7 bits (117), Expect = 7e-07
Identities = 40/131 (30%), Positives = 53/131 (40%), Gaps = 27/131 (20%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MP++P D ESREAM +F + A + V KK E+
Sbjct: 391 MPSVPEDPESREAMSSFMDHLEEKADLSELV-------------KKKELCF--------- 428
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
H + +K S G + + GGH QAG GGDEGE AGAA +
Sbjct: 429 ----IHHWRERCHQKTHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 483
Query: 121 VGDHKEGHGKF 131
++ GH KF
Sbjct: 484 YSNYNNGHRKF 494
>gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein 3
isoform 1 [Homo sapiens]
Length = 632
Score = 49.7 bits (117), Expect = 7e-07
Identities = 40/131 (30%), Positives = 53/131 (40%), Gaps = 27/131 (20%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MP++P D ESREAM +F + A + V KK E+
Sbjct: 443 MPSVPEDPESREAMSSFMDHLEEKADLSELV-------------KKKELCF--------- 480
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
H + +K S G + + GGH QAG GGDEGE AGAA +
Sbjct: 481 ----IHHWRERCHQKTHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 535
Query: 121 VGDHKEGHGKF 131
++ GH KF
Sbjct: 536 YSNYNNGHRKF 546
>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 48.9 bits (115), Expect = 1e-06
Identities = 40/131 (30%), Positives = 52/131 (39%), Gaps = 27/131 (20%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MP++P D ESREAM +F + A + V KK E+
Sbjct: 443 MPSVPEDPESREAMSSFMDHLEEKADLSELV-------------KKKELCF--------- 480
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
H +K S G + + GGH QAG GGDEGE AGAA +
Sbjct: 481 ----IHHWRDRCHQKTHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 535
Query: 121 VGDHKEGHGKF 131
++ GH KF
Sbjct: 536 YSNYNNGHRKF 546
>gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 601
Score = 48.5 bits (114), Expect = 1e-06
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 42 SSQKKPEVAAP--APESGGESVFGETHRALQGAMEKLQEST------------------- 80
S+QK+PE A AP GGES H + + +L +
Sbjct: 406 SAQKEPEAARGPGAPGPGGESSSFMDHLKEKADLSELVKKELCFIHHWRDRRHQKTHHLL 465
Query: 81 SARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
S G C + + GGH QAG GGDEGE AGAA + ++ GH KF
Sbjct: 466 SEPGGCAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAAYSNYNNGHRKF 515
>gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 47.0 bits (110), Expect = 4e-06
Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 27/131 (20%)
Query: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
MP++P D ESREAM +F + A + V Q L ++
Sbjct: 443 MPSVPEDPESREAMSSFMDHLKEKADLSELVKKQELRFIQYWQER--------------- 487
Query: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
+K+ S G + + GGH QAG GGDEGE AGAA +
Sbjct: 488 -----------CHQKIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 535
Query: 121 VGDHKEGHGKF 131
++ GH KF
Sbjct: 536 YSNYNNGHRKF 546
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,392,662
Number of Sequences: 37866
Number of extensions: 330158
Number of successful extensions: 2268
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 2028
Number of HSP's gapped (non-prelim): 380
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.