LOC390561 18289

Name: LOC390561	Sequence: fasta or formatted (1052aa)		NCBI GI: 239745140
Description: PREDICTED: similar to hect domain and RLD 2		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [691aa] PREDICTED: similar to hect domain and RLD 2 alt prot [1102aa] PREDICTED: similar to hect domain and RLD 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 94 3 C cysteine 1.9 20 1 D aspartate 4.1 43 2 E glutamate 9.2 97 2 F phenylalanine 1.8 19 1 G glycine 7.8 82 3 H histidine 2.9 31 2 I isoleucine 3.2 34 2 K lysine 6.2 65 3 L leucine 9.7 102 2 M methionine 2.0 21 1 N asparagine 3.5 37 2 P proline 5.3 56 2 Q glutamine 6.9 73 2 R arginine 4.5 47 1 S serine 7.6 80 2 T threonine 4.8 51 3 V valine 6.2 65 2 W tryptophan 1.5 16 1 X unknown 0.3 3 1 Y tyrosine 1.5 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hect domain and RLD 2 LOC390561 0.853 PREDICTED: similar to hect domain and RLD 2 LOC390561 0.440 PREDICTED: similar to hect domain and RLD 2 LOC728498 0.438 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.436 PREDICTED: Golgin subfamily A member 8-like protein... LOC653720 0.431 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728080 0.428 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728047 0.428 PREDICTED: similar to Golgin subfamily A member 8-l... LOC727909 0.428 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653125 0.425 PREDICTED: similar to Golgin subfamily A member 8-l... LOC643699 0.420 PREDICTED: similar to golgi autoantigen, golgin sub... LOC653061 0.412 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.390 PREDICTED: Golgin subfamily A member 8-like protein... LOC728498 0.365 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.365 PREDICTED: Golgin subfamily A member 8-like protein... LOC653061 0.364 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653720 0.359 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653125 0.357 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728080 0.353 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728047 0.353 PREDICTED: similar to Golgin subfamily A member 8-l... LOC727909 0.353 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653061 0.352 PREDICTED: similar to Golgin subfamily A member 8-l... LOC643699 0.346 PREDICTED: similar to golgi autoantigen, golgin sub... LOC100290629 0.346 PREDICTED: hypothetical protein XP_002347563 GOLGA8B 0.309 golgi autoantigen, golgin subfamily a, 8B GOLGA8A 0.309 golgi autoantigen, golgin subfamily a, 8A HERC2 0.294 hect domain and RLD 2 LOC653061 0.290 PREDICTED: similar to Golgin subfamily A member 8-l... GOLGA8G 0.270 golgi autoantigen, golgin subfamily a, 8G GOLGA8E 0.268 golgi autoantigen, golgin subfamily a, 8E Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.