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Search of human proteins with 239745289
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745289 PREDICTED: hypothetical protein XP_002343419
isoform 2 [Homo sapiens]
(230 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745289 PREDICTED: hypothetical protein XP_002343419 isofor... 481 e-136
gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo sa... 479 e-136
gi|239745291 PREDICTED: hypothetical protein XP_002343418 isofor... 367 e-102
gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo sa... 366 e-101
gi|239745266 PREDICTED: similar to cis-Golgi matrix protein GM13... 265 2e-71
gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens] 263 9e-71
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi... 140 1e-33
gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo sapi... 137 8e-33
gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens] 133 1e-31
gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens] 133 1e-31
gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sap... 130 1e-30
gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo s... 124 7e-29
gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-l... 119 3e-27
gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein... 118 5e-27
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l... 117 8e-27
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l... 116 1e-26
gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-l... 115 3e-26
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l... 115 3e-26
gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-l... 114 9e-26
gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-l... 113 1e-25
gi|113425119 PREDICTED: similar to golgi autoantigen, golgin sub... 112 2e-25
gi|239750924 PREDICTED: similar to Putative golgin subfamily A m... 102 4e-22
gi|239745322 PREDICTED: similar to Putative golgin subfamily A m... 102 4e-22
gi|239756397 PREDICTED: similar to hCG27445 [Homo sapiens] 100 8e-22
gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein... 93 2e-19
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 93 2e-19
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 93 2e-19
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 93 2e-19
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 93 2e-19
gi|13487904 golgi autoantigen, golgin subfamily a, 2-like 1 [Hom... 80 1e-15
>gi|239745289 PREDICTED: hypothetical protein XP_002343419 isoform 2
[Homo sapiens]
Length = 230
Score = 481 bits (1237), Expect = e-136
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 1 MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE 60
MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE
Sbjct: 1 MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE 60
Query: 61 PGSYQPVETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA 120
PGSYQPVETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA
Sbjct: 61 PGSYQPVETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA 120
Query: 121 GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQESTS 180
GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQESTS
Sbjct: 121 GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQESTS 180
Query: 181 ARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 230
ARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF
Sbjct: 181 ARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 230
>gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo
sapiens]
Length = 230
Score = 479 bits (1233), Expect = e-136
Identities = 229/230 (99%), Positives = 229/230 (99%)
Query: 1 MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE 60
MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE
Sbjct: 1 MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE 60
Query: 61 PGSYQPVETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA 120
PGSYQP ETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA
Sbjct: 61 PGSYQPAETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA 120
Query: 121 GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQESTS 180
GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQESTS
Sbjct: 121 GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQESTS 180
Query: 181 ARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 230
ARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF
Sbjct: 181 ARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 230
>gi|239745291 PREDICTED: hypothetical protein XP_002343418 isoform 1
[Homo sapiens]
Length = 185
Score = 367 bits (943), Expect = e-102
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE 60
MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE
Sbjct: 1 MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE 60
Query: 61 PGSYQPVETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA 120
PGSYQPVETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA
Sbjct: 61 PGSYQPVETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA 120
Query: 121 GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQ
Sbjct: 121 GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo
sapiens]
Length = 185
Score = 366 bits (939), Expect = e-101
Identities = 175/176 (99%), Positives = 175/176 (99%)
Query: 1 MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE 60
MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE
Sbjct: 1 MRGCGSRRLYGSWRGCWSWGGKPSTSSGPSPTAASRSWCNNENKSALQLEQQVKELKLGE 60
Query: 61 PGSYQPVETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA 120
PGSYQP ETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA
Sbjct: 61 PGSYQPAETAAKAQLSLMALPGEGDGGGHLDSEQEAPRPMPNIPGDLESREAMVAFFNSA 120
Query: 121 GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQ
Sbjct: 121 GANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|239745266 PREDICTED: similar to cis-Golgi matrix protein GM130
[Homo sapiens]
Length = 131
Score = 265 bits (677), Expect = 2e-71
Identities = 128/131 (97%), Positives = 130/131 (99%)
Query: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGES 159
MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPE+GGES
Sbjct: 1 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
Query: 160 VCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 219
V GETH+ALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL
Sbjct: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
Query: 220 VGDHKEGHGKF 230
VGDHKEGHGKF
Sbjct: 121 VGDHKEGHGKF 131
>gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens]
Length = 131
Score = 263 bits (672), Expect = 9e-71
Identities = 127/131 (96%), Positives = 130/131 (99%)
Query: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGES 159
MPNIPGDLESREAMVAFFNSAGA+AQEEQRVCCQPLAHPVASSQKKPEVAAPAPE+GGES
Sbjct: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
Query: 160 VCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 219
V GETH+ALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL
Sbjct: 61 VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
Query: 220 VGDHKEGHGKF 230
VGDHKEGHGKF
Sbjct: 121 VGDHKEGHGKF 131
>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
sapiens]
Length = 1002
Score = 140 bits (352), Expect = 1e-33
Identities = 78/124 (62%), Positives = 90/124 (72%), Gaps = 19/124 (15%)
Query: 72 KAQLSLMALPGEGDGGGHLDSEQE---------APRPMPNIPGDLESREAMVAFFNSAGA 122
+AQLSLMA PGEGDG + E E P+PMP+IP DLESREAMVAFFNSA A
Sbjct: 686 RAQLSLMAHPGEGDGLDREEEEDEEEEEEEAVAVPQPMPSIPEDLESREAMVAFFNSAVA 745
Query: 123 NAQEEQ----------RVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAM 172
+A+EEQ RV C+ LAH +AS+QK+PE AAPAP TGG+SVCGETH+ALQGAM
Sbjct: 746 SAEEEQARLRGQLKEQRVRCRRLAHLLASAQKEPEAAAPAPGTGGDSVCGETHRALQGAM 805
Query: 173 EKLQ 176
EKLQ
Sbjct: 806 EKLQ 809
>gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo
sapiens]
Length = 434
Score = 137 bits (345), Expect = 8e-33
Identities = 92/200 (46%), Positives = 112/200 (56%), Gaps = 36/200 (18%)
Query: 40 NNENKSALQLEQQVKEL--KLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLD 91
NNENKS LQLEQQVKEL KLG+ + +E A++ AQLSLMALPGEGDGGGHLD
Sbjct: 173 NNENKSVLQLEQQVKELQEKLGKVKETERLEAASQQKQQLTAQLSLMALPGEGDGGGHLD 232
Query: 92 SE-QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAA 150
SE +EAPRP+P+IP DLESREAM F + A + V +K E+
Sbjct: 233 SEGKEAPRPIPSIPQDLESREAMSGFMDHLEEKADLSELV-------------EKEEL-- 277
Query: 151 PAPETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPA 210
G + +K+ + G + + GGH QAGPG GGDEGE A
Sbjct: 278 -----------GFFQYYRERCHQKVYHPITKPGGSAKDAAPGGGHHQAGPGQGGDEGEAA 326
Query: 211 GAAGQVLQLVGDHKEGHGKF 230
GAAG + GD+K GH KF
Sbjct: 327 GAAGDGVAAGGDYK-GHSKF 345
>gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens]
Length = 421
Score = 133 bits (335), Expect = 1e-31
Identities = 97/226 (42%), Positives = 114/226 (50%), Gaps = 67/226 (29%)
Query: 72 KAQLSLMALPGE----------GDG--GGHLDSEQEAPRPMPNIPGDLESREAM------ 113
+AQLSLMALPGE G+G G+ + E+EAP+PMPNIPGDLESRE +
Sbjct: 104 QAQLSLMALPGEVKIKNSSFPSGEGLAQGYTEMEEEAPQPMPNIPGDLESRETVTPLCSW 163
Query: 114 ---------------------------VAFFNSAGANAQEEQRVCCQPLAHPVASSQKKP 146
VAFFNSAG +AQEEQR+CCQPLAHPVASSQKKP
Sbjct: 164 FPRLLISVDFHSFREPVIRHHFTCDQQVAFFNSAGTSAQEEQRMCCQPLAHPVASSQKKP 223
Query: 147 EVAAPAPETGGESV----CGETHQALQGAMEKLQES---TSARGQCQRRSTGRGGHRQAG 199
E AAPAP TGGESV + L+ +EKL+ S + R+ G +
Sbjct: 224 EAAAPAPGTGGESVDFMDLLKEKVDLREWVEKLKLQFIHLSGKTDTMRKYITPYGSQGTV 283
Query: 200 PGPGGDEGEP---------------AGAAGQVLQLVGDHKEGHGKF 230
P E E GQVL+LV DH EGHGKF
Sbjct: 284 PKMRHREEEEIVRLAQDREEMKVNLLEMQGQVLRLVRDHNEGHGKF 329
>gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens]
Length = 421
Score = 133 bits (335), Expect = 1e-31
Identities = 97/226 (42%), Positives = 114/226 (50%), Gaps = 67/226 (29%)
Query: 72 KAQLSLMALPGE----------GDG--GGHLDSEQEAPRPMPNIPGDLESREAM------ 113
+AQLSLMALPGE G+G G+ + E+EAP+PMPNIPGDLESRE +
Sbjct: 104 QAQLSLMALPGEVKIKNSSFPSGEGLAQGYTEMEEEAPQPMPNIPGDLESRETVTPLCSW 163
Query: 114 ---------------------------VAFFNSAGANAQEEQRVCCQPLAHPVASSQKKP 146
VAFFNSAG +AQEEQR+CCQPLAHPVASSQKKP
Sbjct: 164 FPRFLISVDFHSFREPVIRHHFTCDQQVAFFNSAGTSAQEEQRMCCQPLAHPVASSQKKP 223
Query: 147 EVAAPAPETGGESV----CGETHQALQGAMEKLQES---TSARGQCQRRSTGRGGHRQAG 199
E AAPAP TGGESV + L+ +EKL+ S + R+ G +
Sbjct: 224 EAAAPAPGTGGESVDFMDLLKEKVDLREWVEKLKLQFIHLSGKTDTMRKYITPYGSQGTV 283
Query: 200 PGPGGDEGEP---------------AGAAGQVLQLVGDHKEGHGKF 230
P E E GQVL+LV DH EGHGKF
Sbjct: 284 PKMRHREEEEIVRLAQDREEMKVNLLEMQGQVLRLVRDHNEGHGKF 329
>gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo
sapiens]
Length = 430
Score = 130 bits (326), Expect = 1e-30
Identities = 91/198 (45%), Positives = 107/198 (54%), Gaps = 36/198 (18%)
Query: 40 NNENKSALQLEQQVKEL--KLG----EPGSYQPVETAAKAQLSLMALPGEGDGGGHLDSE 93
NNENKS LQLEQQVKEL KLG E S Q + A QLSLMALPGEG GG HLDSE
Sbjct: 173 NNENKSVLQLEQQVKELQEKLGKERLEAASQQKQQLTA--QLSLMALPGEGHGGEHLDSE 230
Query: 94 -QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPA 152
+EAPRPMP++P DLESREAM F + A + V +K E+
Sbjct: 231 GEEAPRPMPSVPEDLESREAMSGFMDHLEEKADLSELV-------------EKEEL---- 273
Query: 153 PETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGA 212
G + +K+ + G + + GGH QAGPG GGDEGE AGA
Sbjct: 274 ---------GFFQYYRERCHQKVYHPITKPGGSAKDAAPGGGHHQAGPGQGGDEGEAAGA 324
Query: 213 AGQVLQLVGDHKEGHGKF 230
AG + GD+K GH KF
Sbjct: 325 AGDGVAAGGDYK-GHSKF 341
>gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo
sapiens]
Length = 1052
Score = 124 bits (311), Expect = 7e-29
Identities = 87/200 (43%), Positives = 106/200 (53%), Gaps = 36/200 (18%)
Query: 40 NNENKSALQLEQQVKEL--KLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLD 91
NNENKSALQLEQQVKEL KLGE + +E A++ AQLSLMALPGEG GG HLD
Sbjct: 416 NNENKSALQLEQQVKELQEKLGEVKDTEHLEAASQQNQQLTAQLSLMALPGEGHGGEHLD 475
Query: 92 SE-QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAA 150
S+ +EAPRPMP++P DLESREAM +F + A + V KK E+
Sbjct: 476 SDGEEAPRPMPSVPEDLESREAMSSFMDQLEEKADLSELV-------------KKKELCF 522
Query: 151 PAPETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPA 210
H +K+ S G + + GGH QAG GGDEGE A
Sbjct: 523 -------------IHHWRDRCHQKIHHLLSEPGGRAKDAALVGGHHQAG-AQGGDEGEAA 568
Query: 211 GAAGQVLQLVGDHKEGHGKF 230
GAA + ++ GH KF
Sbjct: 569 GAAADGVAAYSNYNNGHRKF 588
>gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 629
Score = 119 bits (297), Expect = 3e-27
Identities = 88/198 (44%), Positives = 103/198 (52%), Gaps = 36/198 (18%)
Query: 40 NNENKSALQLEQQVKEL--KLG----EPGSYQPVETAAKAQLSLMALPGEGDGGGHLDSE 93
NNENKS LQLEQQVKEL KLG E S Q + A QLSLMALPGEGDGGGHLDSE
Sbjct: 375 NNENKSVLQLEQQVKELQEKLGKERLEAASQQKQQLTA--QLSLMALPGEGDGGGHLDSE 432
Query: 94 -QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPA 152
+EAPRP+P+IP DLESREAM +F + A + V Q L ++
Sbjct: 433 GEEAPRPIPSIPQDLESREAMSSFMDHLEEKADLSELVKKQELRFIQYWQER-------- 484
Query: 153 PETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGA 212
HQ K+ S G + + GGH QAG GGDE E AGA
Sbjct: 485 -----------CHQ-------KIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEDEAAGA 525
Query: 213 AGQVLQLVGDHKEGHGKF 230
A + ++ GH KF
Sbjct: 526 AADGIAAYSNYNNGHRKF 543
>gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein 3
isoform 1 [Homo sapiens]
Length = 632
Score = 118 bits (295), Expect = 5e-27
Identities = 86/200 (43%), Positives = 105/200 (52%), Gaps = 40/200 (20%)
Query: 40 NNENKSALQLEQQVKEL--KLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLD 91
NNENK+ALQLEQQVKEL KLGE + +E A++ AQLSLMALPGEG GG HLD
Sbjct: 378 NNENKNALQLEQQVKELQEKLGE----EHLEAASQQNQQLTAQLSLMALPGEGHGGEHLD 433
Query: 92 SE-QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAA 150
SE +EAPRPMP++P D ESREAM +F + A + V KK E+
Sbjct: 434 SEGEEAPRPMPSVPEDPESREAMSSFMDHLEEKADLSELV-------------KKKELCF 480
Query: 151 PAPETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPA 210
H + +K S G + + GGH QAG GGDEGE A
Sbjct: 481 -------------IHHWRERCHQKTHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAA 526
Query: 211 GAAGQVLQLVGDHKEGHGKF 230
GAA + ++ GH KF
Sbjct: 527 GAAADGIAAYSNYNNGHRKF 546
>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 117 bits (293), Expect = 8e-27
Identities = 86/200 (43%), Positives = 104/200 (52%), Gaps = 40/200 (20%)
Query: 40 NNENKSALQLEQQVKEL--KLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLD 91
NNENK+ALQLEQQVKEL KLGE + +E A++ AQLSLMALPGEG GG HLD
Sbjct: 378 NNENKNALQLEQQVKELQEKLGE----EHLEAASQQNQQLTAQLSLMALPGEGHGGEHLD 433
Query: 92 SE-QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAA 150
SE +EAPRPMP++P D ESREAM +F + A + V KK E+
Sbjct: 434 SEGEEAPRPMPSVPEDPESREAMSSFMDHLEEKADLSELV-------------KKKELCF 480
Query: 151 PAPETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPA 210
H +K S G + + GGH QAG GGDEGE A
Sbjct: 481 -------------IHHWRDRCHQKTHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAA 526
Query: 211 GAAGQVLQLVGDHKEGHGKF 230
GAA + ++ GH KF
Sbjct: 527 GAAADGIAAYSNYNNGHRKF 546
>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 116 bits (291), Expect = 1e-26
Identities = 86/200 (43%), Positives = 105/200 (52%), Gaps = 40/200 (20%)
Query: 40 NNENKSALQLEQQVKEL--KLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLD 91
NNENKS LQLEQQVKEL KLGE + +E A++ AQLSLMALPGEG GG HLD
Sbjct: 378 NNENKSTLQLEQQVKELQEKLGE----EHLEAASQQNQQLTAQLSLMALPGEGHGGEHLD 433
Query: 92 SE-QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAA 150
SE +EAP+PMP++P DLESREAM +F + A + V Q L ++
Sbjct: 434 SEGEEAPQPMPSVPEDLESREAMSSFMDHLKEKADLSELVKKQELRFIQYWQER------ 487
Query: 151 PAPETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPA 210
HQ K+ S G + + GGH QAG GGDEGE A
Sbjct: 488 -------------CHQ-------KIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAA 526
Query: 211 GAAGQVLQLVGDHKEGHGKF 230
GAA + ++ GH KF
Sbjct: 527 GAAADGIAAYSNYNNGHRKF 546
>gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 115 bits (288), Expect = 3e-26
Identities = 86/200 (43%), Positives = 104/200 (52%), Gaps = 40/200 (20%)
Query: 40 NNENKSALQLEQQVKEL--KLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLD 91
NNENKS LQLEQQVKEL KLGE + +E A++ AQLSLMALPGEG GG HLD
Sbjct: 378 NNENKSTLQLEQQVKELQEKLGE----EHLEAASQQNQQLTAQLSLMALPGEGHGGEHLD 433
Query: 92 SE-QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAA 150
SE +EAPRPMP++P D ESREAM +F + A + V Q L ++
Sbjct: 434 SEGEEAPRPMPSVPEDPESREAMSSFMDHLKEKADLSELVKKQELRFIQYWQER------ 487
Query: 151 PAPETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPA 210
HQ K+ S G + + GGH QAG GGDEGE A
Sbjct: 488 -------------CHQ-------KIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAA 526
Query: 211 GAAGQVLQLVGDHKEGHGKF 230
GAA + ++ GH KF
Sbjct: 527 GAAADGIAAYSNYNNGHRKF 546
>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 4 [Homo sapiens]
Length = 632
Score = 115 bits (288), Expect = 3e-26
Identities = 85/200 (42%), Positives = 105/200 (52%), Gaps = 40/200 (20%)
Query: 40 NNENKSALQLEQQVKEL--KLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLD 91
NNENKS LQLEQQVKEL KLGE + +E A++ AQL+LMALPGEG GG HLD
Sbjct: 378 NNENKSTLQLEQQVKELQEKLGE----EHLEAASQQNQQLTAQLNLMALPGEGHGGEHLD 433
Query: 92 SE-QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAA 150
SE +EAP+PMP++P DLESREAM +F + A + V Q L ++
Sbjct: 434 SEGEEAPQPMPSVPEDLESREAMSSFMDHLKEKADLSELVKKQELRFIQYWQER------ 487
Query: 151 PAPETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPA 210
HQ K+ S G + + GGH QAG GGDEGE A
Sbjct: 488 -------------CHQ-------KIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAA 526
Query: 211 GAAGQVLQLVGDHKEGHGKF 230
GAA + ++ GH KF
Sbjct: 527 GAAADGIAAYSNYNNGHRKF 546
>gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 114 bits (284), Expect = 9e-26
Identities = 85/200 (42%), Positives = 104/200 (52%), Gaps = 40/200 (20%)
Query: 40 NNENKSALQLEQQVKEL--KLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLD 91
NNENKS LQLEQQVKEL KLGE + +E A++ AQLSLMALPGEG GG HLD
Sbjct: 378 NNENKSTLQLEQQVKELQEKLGE----EHLEAASQQNQQLTAQLSLMALPGEGHGGEHLD 433
Query: 92 SE-QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAA 150
SE +EAP+PMP++P D ESREAM +F + A + V Q L ++
Sbjct: 434 SEGEEAPQPMPSVPEDPESREAMSSFMDHLEEKADLSELVKKQELRFIQYWQER------ 487
Query: 151 PAPETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPA 210
HQ K+ S G + + GGH QAG GGDEGE A
Sbjct: 488 -------------CHQ-------KIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAA 526
Query: 211 GAAGQVLQLVGDHKEGHGKF 230
GAA + ++ GH KF
Sbjct: 527 GAAADGIAAYSNYNNGHRKF 546
>gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 630
Score = 113 bits (283), Expect = 1e-25
Identities = 85/200 (42%), Positives = 104/200 (52%), Gaps = 42/200 (21%)
Query: 40 NNENKSALQLEQQVKEL--KLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLD 91
NNENK+ALQLEQQVKEL KLGE + +E A++ AQLSLMALPGEG G HLD
Sbjct: 378 NNENKNALQLEQQVKELQEKLGE----EHLEAASQQNQQLTAQLSLMALPGEGH-GEHLD 432
Query: 92 SE-QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAA 150
SE +EAP+PMP++P DLESREAM +F + A + V K E+
Sbjct: 433 SEGEEAPQPMPSVPEDLESREAMSSFMDHLKEKADLSELV--------------KKELCF 478
Query: 151 PAPETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPA 210
H +K S G C + + GGH QAG GGDEGE A
Sbjct: 479 -------------IHHWRDRRHQKTHHLLSEPGGCAKDAALGGGHHQAG-AQGGDEGEAA 524
Query: 211 GAAGQVLQLVGDHKEGHGKF 230
GAA + ++ GH KF
Sbjct: 525 GAAADGIAAYSNYNNGHRKF 544
>gi|113425119 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 8E isoform 2 [Homo sapiens]
Length = 631
Score = 112 bits (281), Expect = 2e-25
Identities = 84/200 (42%), Positives = 104/200 (52%), Gaps = 40/200 (20%)
Query: 40 NNENKSALQLEQQVKEL--KLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLD 91
NNENKS LQLEQQVKEL KLGE + +E A++ AQLSLMALPGEG GG HLD
Sbjct: 377 NNENKSTLQLEQQVKELQEKLGE----EHLEVASQQNQQLTAQLSLMALPGEGHGGEHLD 432
Query: 92 SE-QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAA 150
SE +EAP+PMP++P D ESREAM +F + A + + Q L ++
Sbjct: 433 SEGEEAPQPMPSVPEDPESREAMSSFMDHLKEKADLSELLKKQELRFIQYWQER------ 486
Query: 151 PAPETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPA 210
HQ K+ S G + + GGH QAG GGDEGE A
Sbjct: 487 -------------CHQ-------KIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAA 525
Query: 211 GAAGQVLQLVGDHKEGHGKF 230
GAA + ++ GH KF
Sbjct: 526 GAAADGIAAYSNYNNGHRKF 545
>gi|239750924 PREDICTED: similar to Putative golgin subfamily A
member 2-like protein 5 [Homo sapiens]
Length = 110
Score = 102 bits (253), Expect = 4e-22
Identities = 54/98 (55%), Positives = 65/98 (66%), Gaps = 11/98 (11%)
Query: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQ-----------RVCCQPLAHPVASSQKKPEV 148
MP+I DL+SREAMVAF NSA +A+EEQ RVCCQ LAHPVA +QK+PE
Sbjct: 1 MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
Query: 149 AAPAPETGGESVCGETHQALQGAMEKLQESTSARGQCQ 186
AAP P TGG+S CGETH+A++ KL S+ CQ
Sbjct: 61 AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQ 98
>gi|239745322 PREDICTED: similar to Putative golgin subfamily A
member 2-like protein 5 [Homo sapiens]
Length = 110
Score = 102 bits (253), Expect = 4e-22
Identities = 54/98 (55%), Positives = 65/98 (66%), Gaps = 11/98 (11%)
Query: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQ-----------RVCCQPLAHPVASSQKKPEV 148
MP+I DL+SREAMVAF NSA +A+EEQ RVCCQ LAHPVA +QK+PE
Sbjct: 1 MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
Query: 149 AAPAPETGGESVCGETHQALQGAMEKLQESTSARGQCQ 186
AAP P TGG+S CGETH+A++ KL S+ CQ
Sbjct: 61 AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQ 98
>gi|239756397 PREDICTED: similar to hCG27445 [Homo sapiens]
Length = 212
Score = 100 bits (250), Expect = 8e-22
Identities = 58/117 (49%), Positives = 65/117 (55%), Gaps = 15/117 (12%)
Query: 114 VAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGESVCGETHQALQGAME 173
VAFFNSAG +AQEEQR+CCQPLAHPVASSQKKPE AAPAP TGG+ + Q M
Sbjct: 18 VAFFNSAGTSAQEEQRMCCQPLAHPVASSQKKPEAAAPAPGTGGKYITPYGSQGTVSKMR 77
Query: 174 KLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 230
+E R R + GQVL+LV DH EGHGKF
Sbjct: 78 HREEEEIVRLAQDREEM---------------KVNLLEMQGQVLRLVRDHNEGHGKF 119
>gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein 3
[Homo sapiens]
Length = 580
Score = 93.2 bits (230), Expect = 2e-19
Identities = 73/199 (36%), Positives = 97/199 (48%), Gaps = 39/199 (19%)
Query: 44 KSALQLEQQVKELK-LGEPGSY----QPVETAAK------AQLSLMALPGEGDGGGHLDS 92
K ++++Q K L+ L +P S + +E A++ AQLSLMALPGEG GG HLDS
Sbjct: 323 KQEERIQEQHKSLQQLAKPQSVFKEPEHLEAASQQNQQLTAQLSLMALPGEGHGGEHLDS 382
Query: 93 E-QEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAP 151
E +EAPRPMP++P D ESREAM +F + A + V KK E+
Sbjct: 383 EGEEAPRPMPSVPEDPESREAMSSFMDHLEEKADLSELV-------------KKKELCF- 428
Query: 152 APETGGESVCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAG 211
H + +K S G + + GGH QAG GGDEGE AG
Sbjct: 429 ------------IHHWRERCHQKTHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAG 475
Query: 212 AAGQVLQLVGDHKEGHGKF 230
AA + ++ GH KF
Sbjct: 476 AAADGIAAYSNYNNGHRKF 494
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 92.8 bits (229), Expect = 2e-19
Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 9/98 (9%)
Query: 40 NNENKSALQLEQQVKELKLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLDS- 92
NNE KSALQLEQQVKEL+ E + +E A++ QLSL+ALPGEGDGG HLDS
Sbjct: 453 NNEKKSALQLEQQVKELQ--EKLDEEHLEAASQRNQQLETQLSLVALPGEGDGGQHLDSE 510
Query: 93 EQEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRV 130
E+EAPRP PNIP DLESREA +F + A ++V
Sbjct: 511 EEEAPRPTPNIPEDLESREATSSFMDLPKEKADGTEQV 548
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 92.8 bits (229), Expect = 2e-19
Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 9/98 (9%)
Query: 40 NNENKSALQLEQQVKELKLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLDS- 92
NNE KSALQLEQQVKEL+ E + +E A++ QLSL+ALPGEGDGG HLDS
Sbjct: 453 NNEKKSALQLEQQVKELQ--EKLDEEHLEAASQRNQQLETQLSLVALPGEGDGGQHLDSE 510
Query: 93 EQEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRV 130
E+EAPRP PNIP DLESREA +F + A ++V
Sbjct: 511 EEEAPRPTPNIPEDLESREATSSFMDLPKEKADGTEQV 548
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 92.8 bits (229), Expect = 2e-19
Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 9/98 (9%)
Query: 40 NNENKSALQLEQQVKELKLGEPGSYQPVETAAK------AQLSLMALPGEGDGGGHLDS- 92
NNE KSALQLEQQVKEL+ E + +E A++ QLSL+ALPGEGDGG HLDS
Sbjct: 453 NNEKKSALQLEQQVKELQ--EKLDEEHLEAASQQNQQLETQLSLVALPGEGDGGQHLDSE 510
Query: 93 EQEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRV 130
E+EAPRP PNIP DLESREA +F + A ++V
Sbjct: 511 EEEAPRPTPNIPEDLESREATSSFMDLPKEKADGTEQV 548
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 92.8 bits (229), Expect = 2e-19
Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 9/98 (9%)
Query: 40 NNENKSALQLEQQVKELKLGEPGSYQPVETAA------KAQLSLMALPGEGDGGGHLDS- 92
NNE KSALQLEQQVKEL+ E + +E A+ + QLSL+ALPGEGDGG HLDS
Sbjct: 453 NNEKKSALQLEQQVKELQ--EKLDEEHLEAASHQNQQLETQLSLVALPGEGDGGQHLDSE 510
Query: 93 EQEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRV 130
E+EAPRP PNIP DLESREA +F + A ++V
Sbjct: 511 EEEAPRPTPNIPEDLESREATSSFMDLPKEKADGTEQV 548
>gi|13487904 golgi autoantigen, golgin subfamily a, 2-like 1 [Homo
sapiens]
Length = 144
Score = 80.5 bits (197), Expect = 1e-15
Identities = 51/130 (39%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 91 DSEQEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASS-------Q 143
+ E+E P+PMP+IP DLES++AMVAFFNSA A+A+EEQ C L AS+
Sbjct: 4 EEEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRP 63
Query: 144 KKPEVAAPAPETGGESVC-GETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGP 202
++ P P+ G C G + +G + + + G G H+QAGPG
Sbjct: 64 RRNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEGGGVHQQAGPGQ 123
Query: 203 GGDEGEPAGA 212
G EGE AGA
Sbjct: 124 GRGEGEAAGA 133
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.128 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,634,325
Number of Sequences: 37866
Number of extensions: 632911
Number of successful extensions: 3426
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 3138
Number of HSP's gapped (non-prelim): 407
length of query: 230
length of database: 18,247,518
effective HSP length: 99
effective length of query: 131
effective length of database: 14,498,784
effective search space: 1899340704
effective search space used: 1899340704
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.