Search of human proteins with 239744873

Search of human proteins with 239744873

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239744873 PREDICTED: hypothetical protein LOC390424 [Homo
sapiens]
         (125 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169206305 PREDICTED: similar to hCG1639781 [Homo sapiens]          247   1e-66
gi|239750572 PREDICTED: similar to hCG1639781 [Homo sapiens]          247   1e-66
gi|239744873 PREDICTED: hypothetical protein LOC390424 [Homo sap...   247   1e-66
gi|50659069 ATP synthase, H+ transporting, mitochondrial F0 comp...   202   4e-53
gi|4885081 ATP synthase, H+ transporting, mitochondrial F0 compl...   202   4e-53
gi|4502301 ATP synthase, H+ transporting, mitochondrial F0 compl...   134   1e-32
gi|50659074 ATP synthase, H+ transporting, mitochondrial F0 comp...   134   1e-32
gi|85794840 ATP synthase, H+ transporting, mitochondrial F0 comp...   131   2e-31
gi|50593533 ATP synthase, H+ transporting, mitochondrial F0 comp...   131   2e-31
gi|217416366 major facilitator superfamily domain containing 9 [...    30   0.47 
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H...    30   0.47 
gi|4506975 solute carrier family 12 (sodium/potassium/chloride t...    28   1.4  
gi|162809334 pregnancy-zone protein [Homo sapiens]                     28   1.4  
gi|169208819 PREDICTED: similar to kinase D-interacting substrat...    28   2.3  
gi|169208593 PREDICTED: similar to kinase D-interacting substrat...    28   2.3  
gi|169208169 PREDICTED: similar to kinase D-interacting substrat...    28   2.3  
gi|7656948 voltage-dependent calcium channel gamma-4 subunit [Ho...    28   2.3  
gi|239756239 PREDICTED: similar to hCG2006901 [Homo sapiens]           27   3.1  
gi|157743247 F-box protein 45 [Homo sapiens]                           27   3.1  
gi|31543397 phosphoglycerate kinase 2 [Homo sapiens]                   27   4.0  
gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1...    27   5.2  
gi|13994190 frizzled 8 [Homo sapiens]                                  27   5.2  
gi|4502565 calpain, small subunit 1 [Homo sapiens]                     27   5.2  
gi|51599151 calpain, small subunit 1 [Homo sapiens]                    27   5.2  
gi|4505101 microtubule-associated protein 7 [Homo sapiens]             27   5.2  
gi|13994263 FERM domain containing 8 [Homo sapiens]                    27   5.2  
gi|221307575 Rho-type GTPase-activating protein FLJ32810 [Homo s...    26   6.8  
gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens]       26   6.8  
gi|18959212 GS homeobox 2 [Homo sapiens]                               26   6.8  
gi|74316006 CNKSR family member 3 [Homo sapiens]                       26   6.8  

>gi|169206305 PREDICTED: similar to hCG1639781 [Homo sapiens]
          Length = 125

 Score =  247 bits (631), Expect = 1e-66
 Identities = 125/125 (100%), Positives = 125/125 (100%)

Query: 1   MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60
           MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS
Sbjct: 1   MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60

Query: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120
           RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA
Sbjct: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120

Query: 121 MGLFC 125
           MGLFC
Sbjct: 121 MGLFC 125


>gi|239750572 PREDICTED: similar to hCG1639781 [Homo sapiens]
          Length = 125

 Score =  247 bits (631), Expect = 1e-66
 Identities = 125/125 (100%), Positives = 125/125 (100%)

Query: 1   MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60
           MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS
Sbjct: 1   MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60

Query: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120
           RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA
Sbjct: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120

Query: 121 MGLFC 125
           MGLFC
Sbjct: 121 MGLFC 125


>gi|239744873 PREDICTED: hypothetical protein LOC390424 [Homo
           sapiens]
          Length = 125

 Score =  247 bits (631), Expect = 1e-66
 Identities = 125/125 (100%), Positives = 125/125 (100%)

Query: 1   MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60
           MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS
Sbjct: 1   MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60

Query: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120
           RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA
Sbjct: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120

Query: 121 MGLFC 125
           MGLFC
Sbjct: 121 MGLFC 125


>gi|50659069 ATP synthase, H+ transporting, mitochondrial F0
           complex, subunit C1 precursor [Homo sapiens]
          Length = 136

 Score =  202 bits (515), Expect = 4e-53
 Identities = 107/125 (85%), Positives = 110/125 (88%)

Query: 1   MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60
           MQT GAL ISPA   CCT GLIR VSASFLNSP NS KQPSYS+ PL+VARREFQTS+VS
Sbjct: 1   MQTAGALFISPALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQVARREFQTSVVS 60

Query: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120
           RDID AAK IGAGAATVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEA
Sbjct: 61  RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA 120

Query: 121 MGLFC 125
           MGLFC
Sbjct: 121 MGLFC 125


>gi|4885081 ATP synthase, H+ transporting, mitochondrial F0 complex,
           subunit C1 precursor [Homo sapiens]
          Length = 136

 Score =  202 bits (515), Expect = 4e-53
 Identities = 107/125 (85%), Positives = 110/125 (88%)

Query: 1   MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60
           MQT GAL ISPA   CCT GLIR VSASFLNSP NS KQPSYS+ PL+VARREFQTS+VS
Sbjct: 1   MQTAGALFISPALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQVARREFQTSVVS 60

Query: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120
           RDID AAK IGAGAATVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEA
Sbjct: 61  RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA 120

Query: 121 MGLFC 125
           MGLFC
Sbjct: 121 MGLFC 125


>gi|4502301 ATP synthase, H+ transporting, mitochondrial F0 complex,
           subunit C3 precursor [Homo sapiens]
          Length = 142

 Score =  134 bits (338), Expect = 1e-32
 Identities = 79/125 (63%), Positives = 88/125 (70%), Gaps = 14/125 (11%)

Query: 15  LCCTWGLIRT--------VSASFLNSPDNSPKQPSYS------SSPLRVARREFQTSIVS 60
           L CT  LIR         +SAS L+ P+ S      +      +   ++ +REFQTS +S
Sbjct: 7   LACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAIS 66

Query: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120
           RDID AAK IGAGAATVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEA
Sbjct: 67  RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA 126

Query: 121 MGLFC 125
           MGLFC
Sbjct: 127 MGLFC 131


>gi|50659074 ATP synthase, H+ transporting, mitochondrial F0
           complex, subunit C3 precursor [Homo sapiens]
          Length = 142

 Score =  134 bits (338), Expect = 1e-32
 Identities = 79/125 (63%), Positives = 88/125 (70%), Gaps = 14/125 (11%)

Query: 15  LCCTWGLIRT--------VSASFLNSPDNSPKQPSYS------SSPLRVARREFQTSIVS 60
           L CT  LIR         +SAS L+ P+ S      +      +   ++ +REFQTS +S
Sbjct: 7   LACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAIS 66

Query: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120
           RDID AAK IGAGAATVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEA
Sbjct: 67  RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA 126

Query: 121 MGLFC 125
           MGLFC
Sbjct: 127 MGLFC 131


>gi|85794840 ATP synthase, H+ transporting, mitochondrial F0
           complex, subunit C2 isoform b precursor [Homo sapiens]
          Length = 198

 Score =  131 bits (329), Expect = 2e-31
 Identities = 77/110 (70%), Positives = 82/110 (74%), Gaps = 5/110 (4%)

Query: 21  LIRTVSASFLNSPDNSPKQPSYS---SSPLR--VARREFQTSIVSRDIDIAAKLIGAGAA 75
           L R +SA  L  P+    +   S   S PL   V+ R FQTS +SRDID AAK IGAGAA
Sbjct: 78  LSRPLSAVVLKRPEILTDESLSSLAVSCPLTSLVSSRSFQTSAISRDIDTAAKFIGAGAA 137

Query: 76  TVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEAMGLFC 125
           TVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEAMGLFC
Sbjct: 138 TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFC 187


>gi|50593533 ATP synthase, H+ transporting, mitochondrial F0
           complex, subunit C2 isoform a precursor [Homo sapiens]
          Length = 157

 Score =  131 bits (329), Expect = 2e-31
 Identities = 77/110 (70%), Positives = 82/110 (74%), Gaps = 5/110 (4%)

Query: 21  LIRTVSASFLNSPDNSPKQPSYS---SSPLR--VARREFQTSIVSRDIDIAAKLIGAGAA 75
           L R +SA  L  P+    +   S   S PL   V+ R FQTS +SRDID AAK IGAGAA
Sbjct: 37  LSRPLSAVVLKRPEILTDESLSSLAVSCPLTSLVSSRSFQTSAISRDIDTAAKFIGAGAA 96

Query: 76  TVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEAMGLFC 125
           TVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEAMGLFC
Sbjct: 97  TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFC 146


>gi|217416366 major facilitator superfamily domain containing 9
           [Homo sapiens]
          Length = 474

 Score = 30.0 bits (66), Expect = 0.47
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 54  FQTSIVSRDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIG 96
           F  S+V   + +  K +GA     G+ GS  GI ++F S ++G
Sbjct: 58  FGVSMVVPLLSLHVKSLGASPTVAGIVGSSYGILQLFSSTLVG 100


>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
           sapiens]
          Length = 425

 Score = 30.0 bits (66), Expect = 0.47
 Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 23/142 (16%)

Query: 5   GALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVSR--- 61
           G L  S  W +CC  GL R V     + P+++      +   LRV R      I+S    
Sbjct: 80  GGLTHSGLWRICCLEGLKRGVCVKINHFPEDTDYDHDSAEYLLRVVRASSIFPILSAILL 139

Query: 62  ---DIDIAAKLIGAGAATV----GVAGSGAGIGKVFGSLII--------GYARNLSLKQQ 106
               + +AA  +      +    G+    AG+  + G ++         G  R+   K  
Sbjct: 140 LLGGVCVAASRVYKSKRNIILGAGILFVAAGLSNIIGVIVYISANAGEPGPKRDEEKKNH 199

Query: 107 L-----FSYATLGFALSEAMGL 123
                 F +  L F L+E +G+
Sbjct: 200 YSYGWSFYFGGLSFILAEVIGV 221


>gi|4506975 solute carrier family 12 (sodium/potassium/chloride
           transporters), member 2 [Homo sapiens]
          Length = 1212

 Score = 28.5 bits (62), Expect = 1.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 50  ARREFQTSIVSRDIDIAAKLIGAGAATVGVAGSGAG 85
           ++  FQ  +VS +   AA    A AA    AG+GAG
Sbjct: 77  SQSRFQVDLVSENAGRAAAAAAAAAAAAAAAGAGAG 112


>gi|162809334 pregnancy-zone protein [Homo sapiens]
          Length = 1482

 Score = 28.5 bits (62), Expect = 1.4
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 88   KVFGSLIIGYARNLSLKQQLFSYATLG 114
            K  G LI GY R L+ K Q  SY+T G
Sbjct: 1009 KAVGYLITGYQRQLNYKHQDGSYSTFG 1035


>gi|169208819 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 27.7 bits (60), Expect = 2.3
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 19  WGLIRTVSASFLNSPDNSPKQPSYSSSP--LRVARREFQTSIVSRDIDIAAKLIGAGAAT 76
           WG     +A+  ++ D+ P +P+ ++SP   R + R     +++R     A+  G     
Sbjct: 177 WGRAAAAAAARGSNSDSPPGRPAPAASPEHRRPSPRRLPRPLLAR----FARAAGGHGGE 232

Query: 77  VGVAGSGAGIGKVFGSLIIGYARNLSL 103
            G AG  +G  +  GS      R++SL
Sbjct: 233 AGSAGKNSGRHRAQGSERPELGRSMSL 259


>gi|169208593 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 27.7 bits (60), Expect = 2.3
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 19  WGLIRTVSASFLNSPDNSPKQPSYSSSP--LRVARREFQTSIVSRDIDIAAKLIGAGAAT 76
           WG     +A+  ++ D+ P +P+ ++SP   R + R     +++R     A+  G     
Sbjct: 177 WGRAAAAAAARGSNSDSPPGRPAPAASPEHRRPSPRRLPRPLLAR----FARAAGGHGGE 232

Query: 77  VGVAGSGAGIGKVFGSLIIGYARNLSL 103
            G AG  +G  +  GS      R++SL
Sbjct: 233 AGSAGKNSGRHRAQGSERPELGRSMSL 259


>gi|169208169 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 27.7 bits (60), Expect = 2.3
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 19  WGLIRTVSASFLNSPDNSPKQPSYSSSP--LRVARREFQTSIVSRDIDIAAKLIGAGAAT 76
           WG     +A+  ++ D+ P +P+ ++SP   R + R     +++R     A+  G     
Sbjct: 177 WGRAAAAAAARGSNSDSPPGRPAPAASPEHRRPSPRRLPRPLLAR----FARAAGGHGGE 232

Query: 77  VGVAGSGAGIGKVFGSLIIGYARNLSL 103
            G AG  +G  +  GS      R++SL
Sbjct: 233 AGSAGKNSGRHRAQGSERPELGRSMSL 259


>gi|7656948 voltage-dependent calcium channel gamma-4 subunit [Homo
           sapiens]
          Length = 327

 Score = 27.7 bits (60), Expect = 2.3
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 10/100 (10%)

Query: 5   GALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVSRDID 64
           G L  S  W +CC  G+ +       + P+++      S   LR+ R      I+S  + 
Sbjct: 59  GDLTHSGLWRVCCIEGIYKGHCFRINHFPEDNDYDHDSSEYLLRIVRASSVFPILSTILL 118

Query: 65  IAAKL-IGAG---------AATVGVAGSGAGIGKVFGSLI 94
           +   L IGAG           + G+    AG+  + G ++
Sbjct: 119 LLGGLCIGAGRIYSRKNNIVLSAGILFVAAGLSNIIGIIV 158


>gi|239756239 PREDICTED: similar to hCG2006901 [Homo sapiens]
          Length = 262

 Score = 27.3 bits (59), Expect = 3.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 4   TGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPK 38
           T A  +   W   C W  +R+V A FL S + S K
Sbjct: 120 TAASQMRQVWEATCLWRRLRSVRADFLVSTEPSLK 154


>gi|157743247 F-box protein 45 [Homo sapiens]
          Length = 286

 Score = 27.3 bits (59), Expect = 3.1
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 4/53 (7%)

Query: 65  IAAKLIGAGAAT--VGVAGSGAGIGKVFGSLIIGYARNLSLK--QQLFSYATL 113
           +AA   GAGAA+   G +G GAG G   GS   G    L  +  + +FSY  L
Sbjct: 1   MAAPAPGAGAASGGAGCSGGGAGAGAGSGSGAAGAGGRLPSRVLELVFSYLEL 53


>gi|31543397 phosphoglycerate kinase 2 [Homo sapiens]
          Length = 417

 Score = 26.9 bits (58), Expect = 4.0
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 11  PAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVSRDIDIAAKLI 70
           P+   C   G    V  S L  PD  P    YS +P+ V  +    S++ +D+      +
Sbjct: 45  PSIKYCLDNGAKAVVLMSHLGRPDGVPMPDKYSLAPVAVELK----SLLGKDVLFLKDCV 100

Query: 71  GA 72
           GA
Sbjct: 101 GA 102


>gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1,
          membrane-bound form [Homo sapiens]
          Length = 398

 Score = 26.6 bits (57), Expect = 5.2
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 58 IVSRDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYAR 99
          +  RD+    +L+G      G + S A IG+  G L  G AR
Sbjct: 42 LAGRDLSRLPQLVGVSTPLQGGSNSAAAIGQSSGELRTGGAR 83


>gi|13994190 frizzled 8 [Homo sapiens]
          Length = 694

 Score = 26.6 bits (57), Expect = 5.2
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 3/47 (6%)

Query: 71  GAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFAL 117
           GAG A  G   +GAG G   G    G    L   +Q   Y T G AL
Sbjct: 352 GAGGAAAGAGAAGAGAGGPGGR---GEYEELGAVEQHVRYETTGPAL 395


>gi|4502565 calpain, small subunit 1 [Homo sapiens]
          Length = 268

 Score = 26.6 bits (57), Expect = 5.2
 Identities = 13/28 (46%), Positives = 14/28 (50%)

Query: 69 LIGAGAATVGVAGSGAGIGKVFGSLIIG 96
          L G G    G  G G G+G V G LI G
Sbjct: 8  LKGGGGGGGGGGGLGGGLGNVLGGLISG 35


>gi|51599151 calpain, small subunit 1 [Homo sapiens]
          Length = 268

 Score = 26.6 bits (57), Expect = 5.2
 Identities = 13/28 (46%), Positives = 14/28 (50%)

Query: 69 LIGAGAATVGVAGSGAGIGKVFGSLIIG 96
          L G G    G  G G G+G V G LI G
Sbjct: 8  LKGGGGGGGGGGGLGGGLGNVLGGLISG 35


>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
          Length = 749

 Score = 26.6 bits (57), Expect = 5.2
 Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 10/83 (12%)

Query: 26  SASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVSRDIDIAAKLIGAGAATVGVAGSGAG 85
           SA+ LNSPD +           R+    +++S+V+R +      +    +T  ++G  A 
Sbjct: 203 SATLLNSPDRAR----------RLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGEAAS 252

Query: 86  IGKVFGSLIIGYARNLSLKQQLF 108
              +       ++RN   + +LF
Sbjct: 253 CSPIIMPYKAAHSRNSMDRPKLF 275


>gi|13994263 FERM domain containing 8 [Homo sapiens]
          Length = 464

 Score = 26.6 bits (57), Expect = 5.2
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 31  NSPDNSPKQPSYSSSPLRVARREFQTSIVSRDIDIAAKLIGAGAATVGVAGSGAGIGKVF 90
           +S   SP  PS S +P++  +   Q S+VS  I           +T+     G GI +V 
Sbjct: 382 DSATGSPSDPSSSLAPVQRPKLRRQGSVVSSRIQ--------HLSTIDYVEDGKGIRRVK 433

Query: 91  GSLIIG-YARNLSLKQQLFSYATLGFALSE 119
                  ++R LSL Q  ++    G +L +
Sbjct: 434 PKRTTSFFSRQLSLGQGSYTVVQPGDSLEQ 463


>gi|221307575 Rho-type GTPase-activating protein FLJ32810 [Homo
           sapiens]
          Length = 874

 Score = 26.2 bits (56), Expect = 6.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 91  GSLIIGYARNLSLKQQLFSYATLGF 115
           GSL+IG  RNLS+  Q FS +   F
Sbjct: 43  GSLLIGALRNLSMAVQKFSQSLQDF 67


>gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens]
          Length = 1843

 Score = 26.2 bits (56), Expect = 6.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 28  SFLNSPDNSPKQPSYSSSPLRVARREFQT 56
           SF NS D  P +P      +R AR  F+T
Sbjct: 134 SFANSTDQEPTRPQPGGGDVRAARWLFET 162


>gi|18959212 GS homeobox 2 [Homo sapiens]
          Length = 304

 Score = 26.2 bits (56), Expect = 6.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 73  GAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYA 111
           G+   G  G+GAG+    GS + G A  L L +  FS A
Sbjct: 74  GSVGAGSGGAGAGVTGAGGSGVAGAAGALPLLKSQFSSA 112


>gi|74316006 CNKSR family member 3 [Homo sapiens]
          Length = 555

 Score = 26.2 bits (56), Expect = 6.8
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 8/54 (14%)

Query: 22  IRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVSRDIDIAAKLIGAGAA 75
           +R  S +  N   +  K P+Y  +  R A  EF TS+V        +LIGA  A
Sbjct: 88  LRASSHNLQNYISSRRKSPAYDGNTSRKAPNEFLTSVV--------ELIGAAKA 133


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,091,839
Number of Sequences: 37866
Number of extensions: 162107
Number of successful extensions: 740
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 710
Number of HSP's gapped (non-prelim): 43
length of query: 125
length of database: 18,247,518
effective HSP length: 90
effective length of query: 35
effective length of database: 14,839,578
effective search space: 519385230
effective search space used: 519385230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.