LOC390424 8496

Name: LOC390424	Sequence: fasta or formatted (125aa)		NCBI GI: 169206305
Description: PREDICTED: similar to hCG1639781		Referenced in: Oxidative Phosphorylation
Other entries for this name: alt mRNA [125aa] PREDICTED: hypothetical protein LOC390424 alt mRNA [125aa] PREDICTED: similar to hCG1639781
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.0 15 2 C cysteine 2.4 3 2 D aspartate 2.4 3 1 E glutamate 1.6 2 1 F phenylalanine 4.8 6 1 G glycine 10.4 13 1 H histidine 0.0 0 0 I isoleucine 7.2 9 2 K lysine 3.2 4 1 L leucine 11.2 14 2 M methionine 1.6 2 1 N asparagine 3.2 4 1 P proline 4.0 5 1 Q glutamine 4.0 5 2 R arginine 4.8 6 2 S serine 12.8 16 3 T threonine 5.6 7 2 V valine 4.8 6 1 W tryptophan 1.6 2 1 Y tyrosine 2.4 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1639781 LOC390424 1.000 PREDICTED: similar to hCG1639781 LOC390424 1.000 PREDICTED: hypothetical protein LOC390424 ATP5G1 0.797 ATP synthase, H+ transporting, mitochondrial F0 comp... ATP5G1 0.797 ATP synthase, H+ transporting, mitochondrial F0 compl... ATP5G3 0.491 ATP synthase, H+ transporting, mitochondrial F0 compl... ATP5G3 0.491 ATP synthase, H+ transporting, mitochondrial F0 comp... ATP5G2 0.477 ATP synthase, H+ transporting, mitochondrial F0 comp... ATP5G2 0.477 ATP synthase, H+ transporting, mitochondrial F0 comp... MFSD9 0.023 major facilitator superfamily domain containing 9 [... CACNG8 0.023 voltage-dependent calcium channel gamma-8 subunit [H... SLC12A2 0.014 solute carrier family 12 (sodium/potassium/chloride t... PZP 0.014 pregnancy-zone protein LOC100131244 0.014 PREDICTED: similar to kinase D-interacting substrat... LOC100131244 0.014 PREDICTED: similar to kinase D-interacting substrat... LOC100131244 0.014 PREDICTED: similar to kinase D-interacting substrat... CACNG4 0.014 voltage-dependent calcium channel gamma-4 subunit [Ho... LOC100293165 0.009 PREDICTED: similar to hCG2006901 FBXO45 0.009 F-box protein 45 PGK2 0.009 phosphoglycerate kinase 2 B4GALT1 0.009 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1... FZD8 0.009 frizzled 8 CAPNS1 0.009 calpain, small subunit 1 CAPNS1 0.009 calpain, small subunit 1 MAP7 0.009 microtubule-associated protein 7 FRMD8 0.009 FERM domain containing 8 FLJ32810 0.005 Rho-type GTPase-activating protein FLJ32810 XIRP1 0.005 xin actin-binding repeat containing 1 GSX2 0.005 GS homeobox 2 CNKSR3 0.005 CNKSR family member 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.