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Search of human proteins with 239744384
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744384 PREDICTED: hypothetical protein XP_002343133 [Homo
sapiens]
(263 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239744384 PREDICTED: hypothetical protein XP_002343133 [Homo ... 553 e-158
gi|239750075 PREDICTED: hypothetical protein [Homo sapiens] 551 e-157
gi|239757101 PREDICTED: hypothetical protein [Homo sapiens] 36 0.030
gi|55750053 atrophin-1 [Homo sapiens] 33 0.25
gi|55750041 atrophin-1 [Homo sapiens] 33 0.25
gi|61966923 forkhead box B2 [Homo sapiens] 33 0.25
gi|110431336 zinc finger and SCAN domain containing 1 [Homo sapi... 32 0.43
gi|24497501 forkhead box A1 [Homo sapiens] 31 1.3
gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo ... 31 1.3
gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo ... 31 1.3
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens] 31 1.3
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens] 31 1.3
gi|50511945 cajalin 2 isoform a [Homo sapiens] 30 2.8
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 30 2.8
gi|236460752 Kruppel-like factor 6 isoform C [Homo sapiens] 29 3.7
gi|37655157 Kruppel-like factor 6 isoform A [Homo sapiens] 29 3.7
gi|31317228 early growth response 3 [Homo sapiens] 29 4.8
gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo ... 29 4.8
gi|169211572 PREDICTED: similar to hCG1816473 [Homo sapiens] 29 4.8
gi|239753698 PREDICTED: hypothetical protein [Homo sapiens] 29 4.8
gi|239748278 PREDICTED: hypothetical protein [Homo sapiens] 29 4.8
gi|169211191 PREDICTED: similar to hCG1816473 [Homo sapiens] 29 4.8
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 29 4.8
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 29 4.8
gi|57863310 stromal antigen 3 [Homo sapiens] 28 6.2
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 28 6.2
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens] 28 6.2
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens] 28 6.2
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens] 28 6.2
gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens] 28 6.2
>gi|239744384 PREDICTED: hypothetical protein XP_002343133 [Homo
sapiens]
Length = 263
Score = 553 bits (1424), Expect = e-158
Identities = 263/263 (100%), Positives = 263/263 (100%)
Query: 1 MFLKAMEVPDIRLNRTPLRESRGSLHTSISHCTKSSWPGVPCMHSSMYFSCSSLWQLFAS 60
MFLKAMEVPDIRLNRTPLRESRGSLHTSISHCTKSSWPGVPCMHSSMYFSCSSLWQLFAS
Sbjct: 1 MFLKAMEVPDIRLNRTPLRESRGSLHTSISHCTKSSWPGVPCMHSSMYFSCSSLWQLFAS 60
Query: 61 STLRISRIISLGSMELVVFILHVKRRERGLASRNSSFSLSLPPLPTTKKPPSTGRWDSPG 120
STLRISRIISLGSMELVVFILHVKRRERGLASRNSSFSLSLPPLPTTKKPPSTGRWDSPG
Sbjct: 61 STLRISRIISLGSMELVVFILHVKRRERGLASRNSSFSLSLPPLPTTKKPPSTGRWDSPG 120
Query: 121 VGICSPNHPTQNSDFQNIPDLRRRAHLCRGEGASALGEEGEWLCTHFTEHTEHTARHEAA 180
VGICSPNHPTQNSDFQNIPDLRRRAHLCRGEGASALGEEGEWLCTHFTEHTEHTARHEAA
Sbjct: 121 VGICSPNHPTQNSDFQNIPDLRRRAHLCRGEGASALGEEGEWLCTHFTEHTEHTARHEAA 180
Query: 181 PPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSISCGT 240
PPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSISCGT
Sbjct: 181 PPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSISCGT 240
Query: 241 NVPARHPSPNAGPEQTALGNKHS 263
NVPARHPSPNAGPEQTALGNKHS
Sbjct: 241 NVPARHPSPNAGPEQTALGNKHS 263
>gi|239750075 PREDICTED: hypothetical protein [Homo sapiens]
Length = 263
Score = 551 bits (1420), Expect = e-157
Identities = 262/263 (99%), Positives = 263/263 (100%)
Query: 1 MFLKAMEVPDIRLNRTPLRESRGSLHTSISHCTKSSWPGVPCMHSSMYFSCSSLWQLFAS 60
MFLKAMEVPDIRLNRTPLRESRGSLHTSISHCTKSSWPGVPCMHSSMYFSCSSLWQLFAS
Sbjct: 1 MFLKAMEVPDIRLNRTPLRESRGSLHTSISHCTKSSWPGVPCMHSSMYFSCSSLWQLFAS 60
Query: 61 STLRISRIISLGSMELVVFILHVKRRERGLASRNSSFSLSLPPLPTTKKPPSTGRWDSPG 120
STLRISRIISLGSMELVVFILHVKRRERGLASRNSSFSLSLPPLPTTK+PPSTGRWDSPG
Sbjct: 61 STLRISRIISLGSMELVVFILHVKRRERGLASRNSSFSLSLPPLPTTKQPPSTGRWDSPG 120
Query: 121 VGICSPNHPTQNSDFQNIPDLRRRAHLCRGEGASALGEEGEWLCTHFTEHTEHTARHEAA 180
VGICSPNHPTQNSDFQNIPDLRRRAHLCRGEGASALGEEGEWLCTHFTEHTEHTARHEAA
Sbjct: 121 VGICSPNHPTQNSDFQNIPDLRRRAHLCRGEGASALGEEGEWLCTHFTEHTEHTARHEAA 180
Query: 181 PPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSISCGT 240
PPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSISCGT
Sbjct: 181 PPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSISCGT 240
Query: 241 NVPARHPSPNAGPEQTALGNKHS 263
NVPARHPSPNAGPEQTALGNKHS
Sbjct: 241 NVPARHPSPNAGPEQTALGNKHS 263
>gi|239757101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 309
Score = 36.2 bits (82), Expect = 0.030
Identities = 45/168 (26%), Positives = 57/168 (33%), Gaps = 33/168 (19%)
Query: 92 SRNSSFSLSLPPLPTTKKPPSTGRWDSPGVGICSPNHPTQNSDFQNIPDLRRRAHLCRGE 151
S SSF L PP + KPPS P G +RR C G
Sbjct: 2 SPGSSFPLPEPP-KSEPKPPSMAPQSQPDRG-----------------RVRRLVTNCAGS 43
Query: 152 GASALGEEGEWLCTHFTEHTEHT-ARHEAAPPQPGLTRCSGGCRYPLWGSPLLGPLEAAA 210
G E E T ++ HT AR A + G G PL+ A
Sbjct: 44 GPPGAPRETESARTGTEDYNSHTTARARAIQGRAG-------------GPPLMRRPGPAV 90
Query: 211 SHAVNSWVGGGGDRESLKTLSGRSSISCGTNVP-ARHPSPNAGPEQTA 257
++ W+ G RE+L R + +CG H P A PE A
Sbjct: 91 TYTSYPWLRLRGKREALTWPGSRGATTCGRGRSLCTHALPPARPEGPA 138
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 33.1 bits (74), Expect = 0.25
Identities = 36/146 (24%), Positives = 55/146 (37%), Gaps = 14/146 (9%)
Query: 110 PPSTGRWDSPGVGICSPNHPTQNSDFQNIPDLRRRAHLCRGEGASALGEEGEWLCTHFTE 169
PPSTG + + + +H Q Q +++ + G S G + H E
Sbjct: 463 PPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAF--PHPLE 520
Query: 170 H-TEHTARHEAAPPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLK 228
+ H A A P G R YP GP H+ S+ G + +
Sbjct: 521 GGSSHHAHPYAMSPSLGSLR-----PYPP------GPAHLPPPHSQVSYSQAGPNGPPVS 569
Query: 229 TLSGRSSISCGTNVPARHPSPNAGPE 254
+ S SS + + P HPSP+ GP+
Sbjct: 570 SSSNSSSSTSQGSYPCSHPSPSQGPQ 595
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 33.1 bits (74), Expect = 0.25
Identities = 36/146 (24%), Positives = 55/146 (37%), Gaps = 14/146 (9%)
Query: 110 PPSTGRWDSPGVGICSPNHPTQNSDFQNIPDLRRRAHLCRGEGASALGEEGEWLCTHFTE 169
PPSTG + + + +H Q Q +++ + G S G + H E
Sbjct: 463 PPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAF--PHPLE 520
Query: 170 H-TEHTARHEAAPPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLK 228
+ H A A P G R YP GP H+ S+ G + +
Sbjct: 521 GGSSHHAHPYAMSPSLGSLR-----PYPP------GPAHLPPPHSQVSYSQAGPNGPPVS 569
Query: 229 TLSGRSSISCGTNVPARHPSPNAGPE 254
+ S SS + + P HPSP+ GP+
Sbjct: 570 SSSNSSSSTSQGSYPCSHPSPSQGPQ 595
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 33.1 bits (74), Expect = 0.25
Identities = 31/89 (34%), Positives = 32/89 (35%), Gaps = 19/89 (21%)
Query: 115 RWDSPGVGICSPNHPTQNSDFQNIPDLRRR----------AHLCRGEGASALGE-EGEWL 163
R D PG G HP F+N LRRR HL G SA G G L
Sbjct: 77 RPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFKVLRADHTHLHAGSTKSAPGAGPGGHL 136
Query: 164 CTHFTEHTEHTARHEAA--------PPQP 184
H H H H AA PPQP
Sbjct: 137 HPHHHHHPHHHHHHHAAAHHHHHHHPPQP 165
>gi|110431336 zinc finger and SCAN domain containing 1 [Homo
sapiens]
Length = 408
Score = 32.3 bits (72), Expect = 0.43
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 153 ASALGEEGEWLCTHFTEHTEHTARHEAAPPQPGL--TRCSGGCRYPLWGSP---LLGP 205
A AL EE EWL T + + HT AP PGL +R + +W P L GP
Sbjct: 167 APALPEESEWLETTQLQQSLHTRAEAEAPRAPGLLGSRARLPLKPSIWDEPEDLLAGP 224
>gi|24497501 forkhead box A1 [Homo sapiens]
Length = 472
Score = 30.8 bits (68), Expect = 1.3
Identities = 42/155 (27%), Positives = 57/155 (36%), Gaps = 17/155 (10%)
Query: 117 DSPGVGICSPNHPTQNSDFQNIPDLRRRAHL-------CRGEGASALGEEGEWLCTHFTE 169
D PG G HP + F+N LRR+ G G S G G +
Sbjct: 236 DKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQPGAGGGGGSGSGGSGAKGGPESRK 295
Query: 170 HTEHTARHEAAPPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKT 229
+ A P L R G L G+P GP A+ +S G LKT
Sbjct: 296 DPSGASNPSADSP---LHRGVHGKTGQLEGAPAPGP-AASPQTLDHSGATATGGASELKT 351
Query: 230 LSGRSS--ISCG----TNVPARHPSPNAGPEQTAL 258
+ ++ IS G +VPA HP+ P ++ L
Sbjct: 352 PASSTAPPISSGPGALASVPASHPAHGLAPHESQL 386
>gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo
sapiens]
Length = 628
Score = 30.8 bits (68), Expect = 1.3
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 105 PTTKKPPSTGRWDSPGVGICSPNHPTQNSDFQNIPDLRRRAHLC---RGEGASALGEEGE 161
PTT +P +TGR P + S + + + P+ + H+ RG AS
Sbjct: 442 PTTSRPKATGR-RPPSQSLTSSSLSSPDIFDSPSPEEDKEEHISLAHRGVDASKK----- 495
Query: 162 WLCTHFTEHTEHTARHEAA-PPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGG 220
T T + ++A+ PP+PG T +GG G P PL +AA ++S +G
Sbjct: 496 ---TSKTVTISQVSDNKASLPPKPG-TMAAGG------GGP--APLSSAAPSPLSSSLGT 543
Query: 221 GGDRESLKTLSG 232
G R + +L G
Sbjct: 544 AGHRANSPSLFG 555
>gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo
sapiens]
Length = 665
Score = 30.8 bits (68), Expect = 1.3
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 105 PTTKKPPSTGRWDSPGVGICSPNHPTQNSDFQNIPDLRRRAHLC---RGEGASALGEEGE 161
PTT +P +TGR P + S + + + P+ + H+ RG AS
Sbjct: 479 PTTSRPKATGR-RPPSQSLTSSSLSSPDIFDSPSPEEDKEEHISLAHRGVDASKK----- 532
Query: 162 WLCTHFTEHTEHTARHEAA-PPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGG 220
T T + ++A+ PP+PG T +GG G P PL +AA ++S +G
Sbjct: 533 ---TSKTVTISQVSDNKASLPPKPG-TMAAGG------GGP--APLSSAAPSPLSSSLGT 580
Query: 221 GGDRESLKTLSG 232
G R + +L G
Sbjct: 581 AGHRANSPSLFG 592
>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
Length = 733
Score = 30.8 bits (68), Expect = 1.3
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 196 PLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSISCGTNVPARHPSPNAGPEQ 255
P P GP A +H + G G +L R S CG ++ + P +A PE+
Sbjct: 198 PPAAEPPSGPEAAVNTHCAELYASGPGPAAALCASERRCSPLCGLDLSKKSPPGSAAPER 257
>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
Length = 714
Score = 30.8 bits (68), Expect = 1.3
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 196 PLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSISCGTNVPARHPSPNAGPEQ 255
P P GP A +H + G G +L R S CG ++ + P +A PE+
Sbjct: 179 PPAAEPPSGPEAAVNTHCAELYASGPGPAAALCASERRCSPLCGLDLSKKSPPGSAAPER 238
>gi|50511945 cajalin 2 isoform a [Homo sapiens]
Length = 1248
Score = 29.6 bits (65), Expect = 2.8
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 60 SSTLRISRIISLGSMELVVFILHVKRRERGLASRNSSFSLSLPPLPTTKKPPSTGRWDSP 119
S +L S + GS+++ I+ R R RN ++ +P ++ TG W P
Sbjct: 974 SPSLSQSTYTTGGSLDVPHIIMQGDARRR----RNENYFDDIPRSKLERQMAQTGDWGEP 1029
Query: 120 GVGICSPNHPTQNSDFQ 136
+ + PN T ++ Q
Sbjct: 1030 SITLRPPNEATASTPVQ 1046
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 29.6 bits (65), Expect = 2.8
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Query: 87 ERGLASRNSSFSLSLPPLPTTK------KPPSTGRWDSPGVGICSPN 127
+RGLA + L LPP P K +PP+TG + G C PN
Sbjct: 509 QRGLAVPDGP--LGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPN 553
>gi|236460752 Kruppel-like factor 6 isoform C [Homo sapiens]
Length = 237
Score = 29.3 bits (64), Expect = 3.7
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 94 NSSFSLSLPPLPTTKKPPST------GRWDSPG-VGICSPNHPTQNSDFQNIPDLRRRAH 146
+SS + + P P + PS G SPG V + P + PD RRR H
Sbjct: 141 SSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTSGKPGDKGNGDASPDGRRRVH 200
Query: 147 LCRGEGASALGEEGEWLCTHFTEHT 171
C G + + L H HT
Sbjct: 201 RCHFNGCRKVYTKSSHLKAHQRTHT 225
>gi|37655157 Kruppel-like factor 6 isoform A [Homo sapiens]
Length = 283
Score = 29.3 bits (64), Expect = 3.7
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 94 NSSFSLSLPPLPTTKKPPST------GRWDSPG-VGICSPNHPTQNSDFQNIPDLRRRAH 146
+SS + + P P + PS G SPG V + P + PD RRR H
Sbjct: 141 SSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTSGKPGDKGNGDASPDGRRRVH 200
Query: 147 LCRGEGASALGEEGEWLCTHFTEHT 171
C G + + L H HT
Sbjct: 201 RCHFNGCRKVYTKSSHLKAHQRTHT 225
>gi|31317228 early growth response 3 [Homo sapiens]
Length = 387
Score = 28.9 bits (63), Expect = 4.8
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 16/74 (21%)
Query: 100 SLPPLPTTKKPPSTGRWDSPGVGICSPNHPTQNSDFQNIPDLRRRAHLCRGEGASALGEE 159
SLP P T KP ++ PN P++ L R H C EG
Sbjct: 245 SLPQPPLTLKPIRPRKY---------PNRPSKTP-------LHERPHACPAEGCDRRFSR 288
Query: 160 GEWLCTHFTEHTEH 173
+ L H HT H
Sbjct: 289 SDELTRHLRIHTGH 302
>gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo
sapiens]
Length = 239
Score = 28.9 bits (63), Expect = 4.8
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 179 AAPPQPGLTRCSGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSISC 238
AA PQP TR R +WG PL A + GGGG SL +GR S
Sbjct: 75 AAVPQPA-TRSG---RLGVWGGPLRHSWAPRPRQASQTRGGGGGP--SLPGPAGRPSGRS 128
Query: 239 GTNVPARHPSPNAG 252
+ V AR P+ G
Sbjct: 129 RSRVGARGRLPSGG 142
>gi|169211572 PREDICTED: similar to hCG1816473 [Homo sapiens]
Length = 256
Score = 28.9 bits (63), Expect = 4.8
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 12/98 (12%)
Query: 132 NSDFQNIPDLRRRAHLCRGEGASALGEEGEWLCTHFTEHTEHTA------RHEAAPPQPG 185
+SD + + +R R L + LG G W H A R AP P
Sbjct: 53 SSDARQVLLVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAPQAPGGPP 112
Query: 186 LTRCSGGCRYPLWGSPLLGPLEAAASHAVNS-WVGGGG 222
L C +P W SP G LEA + A S W+ G
Sbjct: 113 LPSC-----HPSWESPGQGGLEACPTCAQGSLWLPSAG 145
>gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]
Length = 416
Score = 28.9 bits (63), Expect = 4.8
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 190 SGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSISCGTNVPARHPSP 249
+ G + W S P A A H + G G + ++ S S +VP+R P P
Sbjct: 137 AAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFFS--PSVPSRSPLP 194
Query: 250 NAGPEQT 256
PE+T
Sbjct: 195 EREPERT 201
>gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]
Length = 416
Score = 28.9 bits (63), Expect = 4.8
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 190 SGGCRYPLWGSPLLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSISCGTNVPARHPSP 249
+ G + W S P A A H + G G + ++ S S +VP+R P P
Sbjct: 137 AAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFFS--PSVPSRSPLP 194
Query: 250 NAGPEQT 256
PE+T
Sbjct: 195 EREPERT 201
>gi|169211191 PREDICTED: similar to hCG1816473 [Homo sapiens]
Length = 256
Score = 28.9 bits (63), Expect = 4.8
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 12/98 (12%)
Query: 132 NSDFQNIPDLRRRAHLCRGEGASALGEEGEWLCTHFTEHTEHTA------RHEAAPPQPG 185
+SD + + +R R L + LG G W H A R AP P
Sbjct: 53 SSDARQVLLVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAPQAPGGPP 112
Query: 186 LTRCSGGCRYPLWGSPLLGPLEAAASHAVNS-WVGGGG 222
L C +P W SP G LEA + A S W+ G
Sbjct: 113 LPSC-----HPSWESPGQGGLEACPTCAQGSLWLPSAG 145
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 28.9 bits (63), Expect = 4.8
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 199 GSPLL-GPLEA--AASHAVNSWVGGGGDRESLKTLSGRSSISCGTNVPARHPSPNA 251
GSPL GP+ A + SH ++ GG G + +L G S ++P H P A
Sbjct: 387 GSPLSPGPVRAPLSRSHTLSGGCGGRGSKVALLPAGGALQHSRSMSMPVAHSPPAA 442
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 28.9 bits (63), Expect = 4.8
Identities = 27/91 (29%), Positives = 32/91 (35%), Gaps = 16/91 (17%)
Query: 102 PPLPTTKKPPSTGRWD--------SPGVGICSPNHPTQNSDFQNIPDLRRRAHLCRGEGA 153
PP T P S+GR +PG G P + D + PD R G
Sbjct: 931 PPYSTPPVPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFDGPSPPDTRV------GSRE 984
Query: 154 SALGEEGEWLCTHFTEHTEHTARHEAAPPQP 184
+L G H H H H A PPQP
Sbjct: 985 KSLYHSGPLPPAH--HHPPHHHHHHAPPPQP 1013
>gi|57863310 stromal antigen 3 [Homo sapiens]
Length = 1225
Score = 28.5 bits (62), Expect = 6.2
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 125 SPNHPTQNSDFQNIPDLRRRAHLCRGEGASALGEEGEWLCTHFTEHTEHTARHEAAPPQP 184
SP T + Q +P +RR R EG + E + E + + + PP P
Sbjct: 1057 SPVENTAETSPQVLPSSKRR----RVEGPAKPNRED------VSSSQEESLQLNSIPPTP 1106
Query: 185 GLTRCSGGCRYPLWG 199
LT + R PLWG
Sbjct: 1107 TLTSTAVKSRQPLWG 1121
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 28.5 bits (62), Expect = 6.2
Identities = 34/121 (28%), Positives = 42/121 (34%), Gaps = 22/121 (18%)
Query: 90 LASRNSSFSLSLPPL-----------PTTKKPPSTGRWDSPGVGICSPNHPTQNSDFQNI 138
+ S NS+ ++SLPP P + P G PG G P +D Q
Sbjct: 614 ITSPNSAHAVSLPPAAPISYRLAEQQPLLRHPAPPGPGPGPGPG------PGPGADMQRS 667
Query: 139 PDLRRRAHLCRG--EGASALGEE-GEWLCTHFT--EHTEHTARHEAAPPQPGLTRCSGGC 193
D G G ALG G + F E E+ E APP P R G
Sbjct: 668 YDSYYYPAAGPGPRRGTCALGGSLGSLPASPFRIPEDDEYETTQECAPPPPPRPRARGAS 727
Query: 194 R 194
R
Sbjct: 728 R 728
>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
Length = 852
Score = 28.5 bits (62), Expect = 6.2
Identities = 34/121 (28%), Positives = 42/121 (34%), Gaps = 22/121 (18%)
Query: 90 LASRNSSFSLSLPPL-----------PTTKKPPSTGRWDSPGVGICSPNHPTQNSDFQNI 138
+ S NS+ ++SLPP P + P G PG G P +D Q
Sbjct: 622 ITSPNSAHAVSLPPAAPISYRLAEQQPLLRHPAPPGPGPGPGPG------PGPGADMQRS 675
Query: 139 PDLRRRAHLCRG--EGASALGEE-GEWLCTHFT--EHTEHTARHEAAPPQPGLTRCSGGC 193
D G G ALG G + F E E+ E APP P R G
Sbjct: 676 YDSYYYPAAGPGPRRGTCALGGSLGSLPASPFRIPEDDEYETTQECAPPPPPRPRARGAS 735
Query: 194 R 194
R
Sbjct: 736 R 736
>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
Length = 858
Score = 28.5 bits (62), Expect = 6.2
Identities = 34/121 (28%), Positives = 42/121 (34%), Gaps = 22/121 (18%)
Query: 90 LASRNSSFSLSLPPL-----------PTTKKPPSTGRWDSPGVGICSPNHPTQNSDFQNI 138
+ S NS+ ++SLPP P + P G PG G P +D Q
Sbjct: 628 ITSPNSAHAVSLPPAAPISYRLAEQQPLLRHPAPPGPGPGPGPG------PGPGADMQRS 681
Query: 139 PDLRRRAHLCRG--EGASALGEE-GEWLCTHFT--EHTEHTARHEAAPPQPGLTRCSGGC 193
D G G ALG G + F E E+ E APP P R G
Sbjct: 682 YDSYYYPAAGPGPRRGTCALGGSLGSLPASPFRIPEDDEYETTQECAPPPPPRPRARGAS 741
Query: 194 R 194
R
Sbjct: 742 R 742
>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
Length = 850
Score = 28.5 bits (62), Expect = 6.2
Identities = 34/121 (28%), Positives = 42/121 (34%), Gaps = 22/121 (18%)
Query: 90 LASRNSSFSLSLPPL-----------PTTKKPPSTGRWDSPGVGICSPNHPTQNSDFQNI 138
+ S NS+ ++SLPP P + P G PG G P +D Q
Sbjct: 620 ITSPNSAHAVSLPPAAPISYRLAEQQPLLRHPAPPGPGPGPGPG------PGPGADMQRS 673
Query: 139 PDLRRRAHLCRG--EGASALGEE-GEWLCTHFT--EHTEHTARHEAAPPQPGLTRCSGGC 193
D G G ALG G + F E E+ E APP P R G
Sbjct: 674 YDSYYYPAAGPGPRRGTCALGGSLGSLPASPFRIPEDDEYETTQECAPPPPPRPRARGAS 733
Query: 194 R 194
R
Sbjct: 734 R 734
>gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens]
Length = 434
Score = 28.5 bits (62), Expect = 6.2
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 21/104 (20%)
Query: 162 WLCTH--------FT----EHTEHTARHEAAPPQPGLTRCSGGCRYPLWGSPLLGPLEAA 209
WLC H FT E + RH A +P + G + P +P+ P A
Sbjct: 261 WLCGHVHRNILSKFTGQAVELFDEEFRHLYASSKPVM-----GLKSPRLVAPV-PPGAAP 314
Query: 210 ASHAVNSWVGGGGDRESLKTLSGRSSISCGTNVPARHPSPNAGP 253
A+ ++S G DR S SGRS+ G++ R S ++GP
Sbjct: 315 ANGRLSSSSGSASDRTSSNPFSGRSA---GSHPGTRSVSASSGP 355
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,606,528
Number of Sequences: 37866
Number of extensions: 635796
Number of successful extensions: 2190
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2170
Number of HSP's gapped (non-prelim): 47
length of query: 263
length of database: 18,247,518
effective HSP length: 100
effective length of query: 163
effective length of database: 14,460,918
effective search space: 2357129634
effective search space used: 2357129634
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.