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Search of human proteins with 239744025
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744025 PREDICTED: hypothetical protein XP_002343006 [Homo
sapiens]
(265 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239744025 PREDICTED: hypothetical protein XP_002343006 [Homo ... 534 e-152
gi|239749766 PREDICTED: similar to armadillo repeat containing 4... 373 e-103
gi|239755234 PREDICTED: similar to armadillo repeat containing 4... 306 9e-84
gi|31657114 armadillo repeat containing 4 [Homo sapiens] 303 8e-83
gi|169194585 PREDICTED: similar to hCG1793014 [Homo sapiens] 87 1e-17
gi|169201955 PREDICTED: similar to hCG1793014 [Homo sapiens] 87 1e-17
gi|169192125 PREDICTED: similar to UNCoordinated family member (... 87 1e-17
gi|239744894 PREDICTED: similar to Putative ankyrin repeat domai... 73 3e-13
gi|239757617 PREDICTED: similar to hCG1793014 [Homo sapiens] 72 5e-13
gi|115495445 ankyrin repeat domain 30A [Homo sapiens] 68 7e-12
gi|222537750 ankyrin repeat domain 30B [Homo sapiens] 62 5e-10
gi|209977003 ANKRD26-like family C, member 3 [Homo sapiens] 59 3e-09
gi|224282147 prostate-specific P704P [Homo sapiens] 58 1e-08
gi|52856434 POTE ankyrin domain family, member G [Homo sapiens] 57 1e-08
gi|134133226 protein expressed in prostate, ovary, testis, and p... 55 5e-08
gi|113413200 PREDICTED: similar to protein expressed in prostate... 55 5e-08
gi|239741769 PREDICTED: similar to protein expressed in prostate... 55 5e-08
gi|88953571 PREDICTED: similar to protein expressed in prostate,... 55 5e-08
gi|153791352 prostate, ovary, testis expressed protein on chromo... 55 5e-08
gi|52856430 protein expressed in prostate, ovary, testis, and pl... 55 6e-08
gi|153792284 pote protein [Homo sapiens] 55 6e-08
gi|212549546 ANKRD26-like family B, member 2 [Homo sapiens] 55 6e-08
gi|239747116 PREDICTED: hypothetical protein XP_002343915 isofor... 55 6e-08
gi|239747114 PREDICTED: hypothetical protein XP_002343914 isofor... 55 6e-08
gi|239745058 PREDICTED: hypothetical protein XP_002343353 [Homo ... 55 6e-08
gi|53828703 POTE ankyrin domain family, member A isoform 2 [Homo... 51 9e-07
gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens] 50 2e-06
gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo... 50 2e-06
gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo... 50 2e-06
gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo sap... 49 5e-06
>gi|239744025 PREDICTED: hypothetical protein XP_002343006 [Homo
sapiens]
Length = 265
Score = 534 bits (1376), Expect = e-152
Identities = 265/265 (100%), Positives = 265/265 (100%)
Query: 1 MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEKAA 60
MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEKAA
Sbjct: 1 MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEKAA 60
Query: 61 ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL 120
ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL
Sbjct: 61 ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL 120
Query: 121 EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL 180
EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL
Sbjct: 121 EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL 180
Query: 181 VKYLKIREQSIFSCPSKDFMLATSSMPYPSGTTALMLAVCHGSSEIVGILLQQNIDICAE 240
VKYLKIREQSIFSCPSKDFMLATSSMPYPSGTTALMLAVCHGSSEIVGILLQQNIDICAE
Sbjct: 181 VKYLKIREQSIFSCPSKDFMLATSSMPYPSGTTALMLAVCHGSSEIVGILLQQNIDICAE 240
Query: 241 DMCGMTAGGYAVASRFNPLVFIFKG 265
DMCGMTAGGYAVASRFNPLVFIFKG
Sbjct: 241 DMCGMTAGGYAVASRFNPLVFIFKG 265
>gi|239749766 PREDICTED: similar to armadillo repeat containing 4
[Homo sapiens]
Length = 367
Score = 373 bits (957), Expect = e-103
Identities = 184/185 (99%), Positives = 185/185 (100%)
Query: 1 MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEKAA 60
MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKE+AA
Sbjct: 1 MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEEAA 60
Query: 61 ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL 120
ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL
Sbjct: 61 ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL 120
Query: 121 EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL 180
EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL
Sbjct: 121 EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL 180
Query: 181 VKYLK 185
VKYLK
Sbjct: 181 VKYLK 185
>gi|239755234 PREDICTED: similar to armadillo repeat containing 4
[Homo sapiens]
Length = 362
Score = 306 bits (785), Expect = 9e-84
Identities = 152/165 (92%), Positives = 156/165 (94%)
Query: 21 LEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEKAAALHKDISGSGKRSLEKNQIN 80
L++ N +L GISFNEDQQKEKDQLGKAPKKE+AAALHKDISGSGKRSLEKNQIN
Sbjct: 16 LDVFLPNRNVLGYFKGISFNEDQQKEKDQLGKAPKKEEAAALHKDISGSGKRSLEKNQIN 75
Query: 81 FWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAE 140
FWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAE
Sbjct: 76 FWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAE 135
Query: 141 KIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLK 185
KIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLK
Sbjct: 136 KIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLK 180
>gi|31657114 armadillo repeat containing 4 [Homo sapiens]
Length = 1044
Score = 303 bits (777), Expect = 8e-83
Identities = 153/171 (89%), Positives = 158/171 (92%), Gaps = 3/171 (1%)
Query: 35 IGISFNEDQQKEKDQLGKAPKKEKAAALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSL 94
+GISF+EDQQKEKDQLGKAPKKE+AAAL KDISGS KRSLEKNQINFWRNQMTKRWEPSL
Sbjct: 312 LGISFSEDQQKEKDQLGKAPKKEEAAALRKDISGSDKRSLEKNQINFWRNQMTKRWEPSL 371
Query: 95 NWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESE 154
NWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESE
Sbjct: 372 NWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESE 431
Query: 155 EDEEPPDHRQEASADLPSEYWQIQKLVKYLKIREQS---IFSCPSKDFMLA 202
EDEEPPDHRQEASADLPSEYWQIQKLVKYLK Q+ I C +DF LA
Sbjct: 432 EDEEPPDHRQEASADLPSEYWQIQKLVKYLKGGNQTATVIALCSMRDFSLA 482
Score = 70.9 bits (172), Expect = 1e-12
Identities = 34/35 (97%), Positives = 34/35 (97%)
Query: 1 MGVALRKLTQWTAAGHGTGILEITPLNEVILKEII 35
MGVALRKLTQWTAAGHGTGILEITPLNE ILKEII
Sbjct: 1 MGVALRKLTQWTAAGHGTGILEITPLNEAILKEII 35
>gi|169194585 PREDICTED: similar to hCG1793014 [Homo sapiens]
Length = 366
Score = 87.4 bits (215), Expect = 1e-17
Identities = 42/46 (91%), Positives = 43/46 (93%)
Query: 213 TALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFNP 258
TALMLAVCHGS E V ILLQQ+IDICAEDMCGMTAGGYAVASRFNP
Sbjct: 159 TALMLAVCHGSLERVSILLQQDIDICAEDMCGMTAGGYAVASRFNP 204
>gi|169201955 PREDICTED: similar to hCG1793014 [Homo sapiens]
Length = 366
Score = 87.4 bits (215), Expect = 1e-17
Identities = 42/46 (91%), Positives = 43/46 (93%)
Query: 213 TALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFNP 258
TALMLAVCHGS E V ILLQQ+IDICAEDMCGMTAGGYAVASRFNP
Sbjct: 159 TALMLAVCHGSLERVSILLQQDIDICAEDMCGMTAGGYAVASRFNP 204
>gi|169192125 PREDICTED: similar to UNCoordinated family member
(unc-44) [Homo sapiens]
Length = 393
Score = 87.4 bits (215), Expect = 1e-17
Identities = 42/46 (91%), Positives = 43/46 (93%)
Query: 213 TALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFNP 258
TALMLAVCHGS E V ILLQQ+IDICAEDMCGMTAGGYAVASRFNP
Sbjct: 159 TALMLAVCHGSLERVSILLQQDIDICAEDMCGMTAGGYAVASRFNP 204
>gi|239744894 PREDICTED: similar to Putative ankyrin repeat
domain-containing protein ENSP00000383069 [Homo sapiens]
Length = 197
Score = 72.8 bits (177), Expect = 3e-13
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 213 TALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFN 257
TALMLA+CHGSSEIVG++LQQN+DICA D CGM A YAVA FN
Sbjct: 152 TALMLAICHGSSEIVGMVLQQNVDICAVDTCGMIAERYAVACGFN 196
>gi|239757617 PREDICTED: similar to hCG1793014 [Homo sapiens]
Length = 251
Score = 72.0 bits (175), Expect = 5e-13
Identities = 34/46 (73%), Positives = 39/46 (84%)
Query: 213 TALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFNP 258
TALMLA+CHGSSEIVG++LQ+N+DICAED GM A YAVA FNP
Sbjct: 206 TALMLAMCHGSSEIVGMVLQENVDICAEDTWGMIAERYAVACGFNP 251
>gi|115495445 ankyrin repeat domain 30A [Homo sapiens]
Length = 1341
Score = 68.2 bits (165), Expect = 7e-12
Identities = 32/45 (71%), Positives = 38/45 (84%)
Query: 213 TALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFN 257
TALMLAVCHGSSEIVG+LLQQN+D+ A D+CG+TA YAV F+
Sbjct: 151 TALMLAVCHGSSEIVGMLLQQNVDVFAADICGVTAEHYAVTCGFH 195
>gi|222537750 ankyrin repeat domain 30B [Homo sapiens]
Length = 1392
Score = 62.0 bits (149), Expect = 5e-10
Identities = 31/48 (64%), Positives = 37/48 (77%)
Query: 210 SGTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFN 257
S TALMLA+C GSSEIVG+LLQQN+D+ AED+ G+TA YA A N
Sbjct: 204 SKCTALMLAICEGSSEIVGMLLQQNVDVFAEDIHGITAERYAAACGVN 251
>gi|209977003 ANKRD26-like family C, member 3 [Homo sapiens]
Length = 545
Score = 59.3 bits (142), Expect = 3e-09
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFN 257
G TAL+LAVC GS+ IV +LL+QNID+ ++D+ G TA YAV+SR N
Sbjct: 342 GRTALILAVCCGSASIVSLLLEQNIDVSSQDLSGQTAREYAVSSRHN 388
>gi|224282147 prostate-specific P704P [Homo sapiens]
Length = 508
Score = 57.8 bits (138), Expect = 1e-08
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFN 257
G T L+LAVC GS+ IV +LL+QNID+ ++D+ G TA YAV+SR N
Sbjct: 305 GRTVLILAVCCGSASIVSLLLEQNIDVSSQDLSGQTAREYAVSSRHN 351
>gi|52856434 POTE ankyrin domain family, member G [Homo sapiens]
Length = 508
Score = 57.4 bits (137), Expect = 1e-08
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFN 257
G TAL+LAVC GS+ IV +LL+QNID+ ++D+ G TA YAV+S N
Sbjct: 305 GRTALILAVCCGSASIVSLLLEQNIDVSSQDLSGQTAREYAVSSHHN 351
>gi|134133226 protein expressed in prostate, ovary, testis, and
placenta 2 [Homo sapiens]
Length = 1075
Score = 55.5 bits (132), Expect = 5e-08
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAVC GS+ IV +LL+QNID+ ++D+ G TA YAV+S
Sbjct: 305 GRTALILAVCCGSASIVSLLLEQNIDVSSQDLSGQTAREYAVSS 348
>gi|113413200 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 [Homo sapiens]
Length = 1038
Score = 55.5 bits (132), Expect = 5e-08
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAVC GS+ IV +LL+QNID+ ++D+ G TA YAV+S
Sbjct: 268 GRTALILAVCCGSASIVSLLLEQNIDVSSQDLSGQTAREYAVSS 311
>gi|239741769 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 [Homo sapiens]
Length = 952
Score = 55.5 bits (132), Expect = 5e-08
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAVC GS+ IV +LL+QNID+ ++D+ G TA YAV+S
Sbjct: 305 GRTALILAVCCGSASIVSLLLEQNIDVSSQDLSGQTAREYAVSS 348
>gi|88953571 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 isoform 2 [Homo sapiens]
Length = 1075
Score = 55.5 bits (132), Expect = 5e-08
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAVC GS+ IV +LL+QNID+ ++D+ G TA YAV+S
Sbjct: 305 GRTALILAVCCGSASIVSLLLEQNIDVSSQDLSGQTAREYAVSS 348
>gi|153791352 prostate, ovary, testis expressed protein on
chromosome 2 [Homo sapiens]
Length = 1075
Score = 55.5 bits (132), Expect = 5e-08
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAVC GS+ IV +LL+QNID+ ++D+ G TA YAV+S
Sbjct: 305 GRTALILAVCCGSASIVSLLLEQNIDVSSQDLSGQTAREYAVSS 348
>gi|52856430 protein expressed in prostate, ovary, testis, and
placenta 15 [Homo sapiens]
Length = 581
Score = 55.1 bits (131), Expect = 6e-08
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAVC GS+ IV +LL+QN+D+ ++D+ G TA YAV+S
Sbjct: 305 GRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTAREYAVSS 348
>gi|153792284 pote protein [Homo sapiens]
Length = 584
Score = 55.1 bits (131), Expect = 6e-08
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAVC GS+ IV +LL+QN+D+ ++D+ G TA YAV+S
Sbjct: 305 GRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTAREYAVSS 348
>gi|212549546 ANKRD26-like family B, member 2 [Homo sapiens]
Length = 542
Score = 55.1 bits (131), Expect = 6e-08
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAVC GS+ IV +LL+QN+D+ ++D+ G TA YAV+S
Sbjct: 305 GRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTAREYAVSS 348
>gi|239747116 PREDICTED: hypothetical protein XP_002343915 isoform 2
[Homo sapiens]
Length = 551
Score = 55.1 bits (131), Expect = 6e-08
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAVC GS+ IV +LL+QN+D+ ++D+ G TA YAV+S
Sbjct: 272 GRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTAREYAVSS 315
>gi|239747114 PREDICTED: hypothetical protein XP_002343914 isoform 1
[Homo sapiens]
Length = 584
Score = 55.1 bits (131), Expect = 6e-08
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAVC GS+ IV +LL+QN+D+ ++D+ G TA YAV+S
Sbjct: 305 GRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTAREYAVSS 348
>gi|239745058 PREDICTED: hypothetical protein XP_002343353 [Homo
sapiens]
Length = 544
Score = 55.1 bits (131), Expect = 6e-08
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAVC GS+ IV +LL+QN+D+ ++D+ G TA YAV+S
Sbjct: 268 GRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTAREYAVSS 311
>gi|53828703 POTE ankyrin domain family, member A isoform 2 [Homo
sapiens]
Length = 498
Score = 51.2 bits (121), Expect = 9e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVAS 254
G TAL+LAV GS+ IV +LLQQNID+ ++D+ G TA YAV+S
Sbjct: 231 GRTALILAVRCGSASIVSLLLQQNIDVFSQDVFGQTAEDYAVSS 274
>gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens]
Length = 917
Score = 50.1 bits (118), Expect = 2e-06
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFNPL 259
G TAL+LA +GS+ +V LLQ NID+ +D+ G TA YAVAS+F +
Sbjct: 204 GRTALILAARNGSTSVVYQLLQHNIDVFCQDISGWTAEDYAVASKFQAI 252
>gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo
sapiens]
Length = 917
Score = 50.1 bits (118), Expect = 2e-06
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFNPL 259
G TAL+LA +GS+ +V LLQ NID+ +D+ G TA YAVAS+F +
Sbjct: 204 GRTALILAARNGSTSVVYQLLQHNIDVFCQDISGWTAEDYAVASKFQAI 252
>gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo
sapiens]
Length = 917
Score = 50.1 bits (118), Expect = 2e-06
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 211 GTTALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVASRFNPL 259
G TAL+LA +GS+ +V LLQ NID+ +D+ G TA YAVAS+F +
Sbjct: 204 GRTALILAARNGSTSVVYQLLQHNIDVFCQDISGWTAEDYAVASKFQAI 252
>gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo
sapiens]
Length = 823
Score = 48.9 bits (115), Expect = 5e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 213 TALMLAVCHGSSEIVGILLQQNIDICAEDMCGMTAGGYAVA 253
+ALMLAV + S IV ILL+QNID+ A+DMCG A YA++
Sbjct: 201 SALMLAVYYDSPGIVNILLKQNIDVFAQDMCGRDAEDYAIS 241
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,579,970
Number of Sequences: 37866
Number of extensions: 486849
Number of successful extensions: 3030
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 2621
Number of HSP's gapped (non-prelim): 549
length of query: 265
length of database: 18,247,518
effective HSP length: 100
effective length of query: 165
effective length of database: 14,460,918
effective search space: 2386051470
effective search space used: 2386051470
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.