Guide to the Human Genome
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Name: LOC729549 Sequence: fasta or formatted (393aa) NCBI GI: 169192125
Description:

PREDICTED: similar to UNCoordinated family member (unc-44)

Not currently referenced in the text

Other entries for this name:
alt prot {366aa} PREDICTED: similar to hCG1793014
alt prot {366aa} PREDICTED: similar to hCG1793014
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         44           2
 C cysteine            3.8         15           1
 D aspartate           3.8         15           1
 E glutamate           4.8         19           2
 F phenylalanine       2.8         11           2
 G glycine             8.4         33           2
 H histidine           2.3          9           2
 I isoleucine          3.8         15           1
 K lysine              4.6         18           1
 L leucine            10.7         42           3
 M methionine          2.0          8           1
 N asparagine          3.6         14           1
 P proline             7.1         28           4
 Q glutamine           2.3          9           2
 R arginine            7.9         31           2
 S serine              6.6         26           1
 T threonine           4.1         16           1
 V valine              6.4         25           2
 W tryptophan          1.5          6           1
 Y tyrosine            2.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to UNCoordinated family member (... 
LOC729549             0.903   PREDICTED: similar to hCG1793014 
LOC729549             0.900   PREDICTED: similar to hCG1793014 
LOC100132257          0.294   PREDICTED: similar to Putative ankyrin repeat domai...
LOC730465             0.293   PREDICTED: similar to hCG1793014 
ANKRD30A              0.288   ankyrin repeat domain 30A 
ANKRD30B              0.264   ankyrin repeat domain 30B 
LOC729722             0.224   PREDICTED: ankyrin repeat domain-containing protein...
LOC730465             0.224   PREDICTED: similar to Putative ankyrin repeat domai...
LOC729722             0.224   PREDICTED: ankyrin repeat domain-containing protein...
LOC100132257          0.215   PREDICTED: similar to Putative ankyrin repeat domai...
ANKRD20A1             0.205   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.205   ankyrin repeat domain 20 family, member A4 
ANKRD20A3             0.204   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.204   ankyrin repeat domain 20 family, member A2 
ANKRD20A5             0.201   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.201   PREDICTED: ankyrin repeat domain 20 family, member ...
POTEH                 0.193   ANKRD26-like family C, member 3 
P704P                 0.192   prostate-specific P704P 
POTEG                 0.190   POTE ankyrin domain family, member G 
ANKRD18B              0.190   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.190   PREDICTED: ankyrin repeat domain 18B 
POTEA                 0.188   POTE ankyrin domain family, member A isoform 2 [Homo...
ANKRD18B              0.188   PREDICTED: ankyrin repeat domain 18B 
POTEF                 0.187   prostate, ovary, testis expressed protein on chromo...
POTEE                 0.186   protein expressed in prostate, ovary, testis, and p...
LOC100287399          0.182   PREDICTED: hypothetical protein XP_002343353 
LOC653781             0.182   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.182   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.182   PREDICTED: similar to protein expressed in prostate,...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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