LOC100129791 17269

Name: LOC100129791	Sequence: fasta or formatted (338aa)		NCBI GI: 239742533
Description: PREDICTED: hypothetical protein LOC100129791		Referenced in: DNA Transposon and Retrovirus-related Sequences
Other entries for this name: alt mRNA [338aa] PREDICTED: hypothetical protein LOC100129791 alt prot [338aa] PREDICTED: hypothetical protein LOC100129791
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 18 2 C cysteine 1.5 5 1 D aspartate 3.3 11 1 E glutamate 12.7 43 2 F phenylalanine 3.0 10 1 G glycine 3.0 10 1 H histidine 0.6 2 1 I isoleucine 5.9 20 2 K lysine 9.8 33 2 L leucine 8.3 28 2 M methionine 3.6 12 1 N asparagine 5.9 20 2 P proline 3.8 13 3 Q glutamine 6.2 21 1 R arginine 10.7 36 2 S serine 6.5 22 3 T threonine 4.7 16 2 V valine 2.7 9 1 W tryptophan 0.9 3 1 Y tyrosine 1.8 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100129791 LOC100129791 1.000 PREDICTED: hypothetical protein LOC100129791 LOC100129791 0.989 PREDICTED: hypothetical protein LOC100129791 L1TD1 0.217 LINE-1 type transposase domain containing 1 LOC100291103 0.172 PREDICTED: hypothetical protein XP_002348046 LOC100288854 0.172 PREDICTED: hypothetical protein XP_002344210 LOC100291649 0.171 PREDICTED: similar to lactation elevated 1 (predict... RAD50 0.042 RAD50 homolog isoform 2 RAD50 0.042 RAD50 homolog isoform 1 UNC13C 0.042 unc-13 homolog C KIF20B 0.039 M-phase phosphoprotein 1 KIAA0947 0.039 hypothetical protein LOC23379 UACA 0.037 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.037 uveal autoantigen with coiled-coil domains and ankyr... ANKRD26 0.036 ankyrin repeat domain 26 CLIP1 0.034 restin isoform b CLIP1 0.034 restin isoform a PPL 0.034 periplakin GOLGA4 0.033 golgi autoantigen, golgin subfamily a, 4 CENPE 0.033 centromere protein E SMC6 0.033 SMC6 protein SMC6 0.033 SMC6 protein CGNL1 0.031 cingulin-like 1 KTN1 0.031 kinectin 1 isoform a KTN1 0.031 kinectin 1 isoform c KTN1 0.031 kinectin 1 isoform a LOC400352 0.031 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.031 PREDICTED: similar to Putative golgin subfamily A m... KIF5A 0.031 kinesin family member 5A FYCO1 0.031 FYVE and coiled-coil domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.