LOC100287401 17077

Name: LOC100287401	Sequence: fasta or formatted (202aa)		NCBI GI: 239742020
Description: PREDICTED: hypothetical protein XP_002342373		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.4 27 5 C cysteine 5.0 10 2 D aspartate 0.5 1 1 E glutamate 1.5 3 1 F phenylalanine 2.0 4 2 G glycine 9.9 20 2 H histidine 2.5 5 1 I isoleucine 2.0 4 1 K lysine 1.0 2 1 L leucine 12.4 25 3 M methionine 2.0 4 1 N asparagine 1.5 3 1 P proline 11.9 24 2 Q glutamine 5.9 12 2 R arginine 10.4 21 3 S serine 8.9 18 2 T threonine 3.5 7 2 V valine 3.5 7 1 W tryptophan 2.5 5 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342373 LOC100291594 0.995 PREDICTED: hypothetical protein XP_002345692 LOC100289769 0.995 PREDICTED: hypothetical protein XP_002346534 CASKIN1 0.033 CASK interacting protein 1 SPRN 0.033 shadow of prion protein HCN2 0.030 hyperpolarization activated cyclic nucleotide-gated... VASP 0.028 vasodilator-stimulated phosphoprotein LOC100289408 0.028 PREDICTED: hypothetical protein LOC100289763 0.028 PREDICTED: hypothetical protein XP_002347867 LOC100289408 0.028 PREDICTED: hypothetical protein XP_002344217 LOC100289681 0.028 PREDICTED: hypothetical protein XP_002343623 COL1A1 0.028 alpha 1 type I collagen preproprotein LOC100292172 0.028 PREDICTED: hypothetical protein CABLES1 0.028 Cdk5 and Abl enzyme substrate 1 isoform 2 FLJ37078 0.028 hypothetical protein LOC222183 CHST2 0.025 carbohydrate (N-acetylglucosamine-6-O) sulfotransfer... COL4A3 0.025 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.025 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.025 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.025 alpha 3 type IV collagen isoform 1 precursor COL1A2 0.025 alpha 2 type I collagen LOC100293980 0.025 PREDICTED: hypothetical protein LOC100290741 0.025 PREDICTED: hypothetical protein XP_002346521 LOC100288445 0.025 PREDICTED: hypothetical protein XP_002342359 COL2A1 0.025 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.025 collagen, type II, alpha 1 isoform 2 precursor [Hom... AGAP2 0.023 centaurin, gamma 1 isoform PIKE-L HOXA13 0.023 homeobox A13 LOC100129036 0.023 PREDICTED: hypothetical protein TAF4 0.023 TBP-associated factor 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.