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Search of human proteins with 116256451
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116256451 amine oxidase (flavin containing) domain 1 [Homo
sapiens]
(590 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116256451 amine oxidase (flavin containing) domain 1 [Homo sa... 1216 0.0
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 182 6e-46
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b... 182 6e-46
gi|28559074 spermine oxidase isoform 1 [Homo sapiens] 107 4e-23
gi|28559076 spermine oxidase isoform 2 [Homo sapiens] 105 1e-22
gi|23097272 polyamine oxidase isoform 1 [Homo sapiens] 100 5e-21
gi|28559080 spermine oxidase isoform 4 [Homo sapiens] 94 4e-19
gi|38202207 monoamine oxidase B [Homo sapiens] 67 6e-11
gi|4557735 monoamine oxidase A [Homo sapiens] 59 1e-08
gi|46397310 polyamine oxidase isoform 4 [Homo sapiens] 52 1e-06
gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo sa... 49 1e-05
gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens] 49 1e-05
gi|28559078 spermine oxidase isoform 3 [Homo sapiens] 47 5e-05
gi|46397308 polyamine oxidase isoform 2 [Homo sapiens] 40 0.005
gi|33519426 thioredoxin reductase 1 isoform 2 [Homo sapiens] 36 0.11
gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens] 36 0.11
gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens] 36 0.11
gi|33519430 thioredoxin reductase 1 isoform 2 [Homo sapiens] 36 0.11
gi|33519428 thioredoxin reductase 1 isoform 2 [Homo sapiens] 36 0.11
gi|62865635 squalene epoxidase [Homo sapiens] 36 0.11
gi|229577391 pyridine nucleotide-disulphide oxidoreductase domai... 35 0.15
gi|170172518 microtubule associated monoxygenase, calponin and L... 35 0.19
gi|209862793 microtubule associated monoxygenase, calponin and L... 35 0.19
gi|209862789 microtubule associated monoxygenase, calponin and L... 35 0.19
gi|7662284 microtubule associated monoxygenase, calponin and LIM... 35 0.19
gi|7661950 SH2 domain binding protein 1 [Homo sapiens] 34 0.43
gi|50541961 flavin containing monooxygenase 3 isoform 2 [Homo sa... 33 0.73
gi|50541965 flavin containing monooxygenase 3 isoform 1 [Homo sa... 33 0.73
gi|119703746 electron-transferring-flavoprotein dehydrogenase pr... 33 0.96
gi|5902054 ring finger protein 5 [Homo sapiens] 32 1.3
>gi|116256451 amine oxidase (flavin containing) domain 1 [Homo
sapiens]
Length = 590
Score = 1216 bits (3147), Expect = 0.0
Identities = 590/590 (100%), Positives = 590/590 (100%)
Query: 1 MATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRKCEKAGCTA 60
MATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRKCEKAGCTA
Sbjct: 1 MATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRKCEKAGCTA 60
Query: 61 TCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSN 120
TCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSN
Sbjct: 61 TCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSN 120
Query: 121 GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKPE 180
GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKPE
Sbjct: 121 GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKPE 180
Query: 181 TSDHCSLPEDLEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLINTGVLSVGAD 240
TSDHCSLPEDLEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLINTGVLSVGAD
Sbjct: 181 TSDHCSLPEDLEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLINTGVLSVGAD 240
Query: 241 QYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTV 300
QYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTV
Sbjct: 241 QYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTV 300
Query: 301 GRGAQIVNGCINNPVALMCEQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDI 360
GRGAQIVNGCINNPVALMCEQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDI
Sbjct: 301 GRGAQIVNGCINNPVALMCEQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDI 360
Query: 361 QLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAIN 420
QLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAIN
Sbjct: 361 QLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAIN 420
Query: 421 SLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSV 480
SLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSV
Sbjct: 421 SLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSV 480
Query: 481 IAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKT 540
IAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKT
Sbjct: 481 IAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKT 540
Query: 541 GGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF 590
GGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
Sbjct: 541 GGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF 590
>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
[Homo sapiens]
Length = 876
Score = 182 bits (463), Expect = 6e-46
Identities = 109/287 (37%), Positives = 160/287 (55%), Gaps = 27/287 (9%)
Query: 322 VSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIQLKSPVQCIDY--SGDEVQVT 379
+S + WD ++ F +F G H + GYS + LAEGLDI+L + V+ + Y SG EV
Sbjct: 571 LSLKHWDQDDDF-EFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAV 629
Query: 380 TTDGTG----YSAQKVLVTVPLALL--QKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQ 433
T T Y VL T+PL +L Q A+QF PPL E K A+ +G G + K+ L
Sbjct: 630 NTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLC 689
Query: 434 FPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLD 493
F FWD V + FGHV + + RG +F+++ K +L++++AGEA + +
Sbjct: 690 FDRVFWDPSV---NLFGHVGSTTASRGELFLFWNL---YKAPILLALVAGEAAGIMENIS 743
Query: 494 DKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAED 553
D ++ +C+A L+ +F VP P + V+RW DPW + +YS+V G SG YD++A+
Sbjct: 744 DDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQP 803
Query: 554 IQ------------GTVFFAGEATNRHFPQTVTGAYLSGVREASKIA 588
I +FFAGE T R++P TV GA LSG+REA +IA
Sbjct: 804 ITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIA 850
Score = 73.6 bits (179), Expect = 5e-13
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 217 VERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKV 276
V R+ ++ R GLIN G+ LP K VIIIG+G +GLAAARQL +FG+ V
Sbjct: 269 VHRVHSYLERHGLINFGIYKRIKP---LPTKKTGK-VIIIGSGVSGLAAARQLQSFGMDV 324
Query: 277 TVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQVS 323
T+LEA+DR+GGRV + V GA +V G NP+A++ +QV+
Sbjct: 325 TLLEARDRVGGRVATFRKGNYV-ADLGAMVVTGLGGNPMAVVSKQVN 370
>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
[Homo sapiens]
Length = 852
Score = 182 bits (463), Expect = 6e-46
Identities = 109/287 (37%), Positives = 160/287 (55%), Gaps = 27/287 (9%)
Query: 322 VSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIQLKSPVQCIDY--SGDEVQVT 379
+S + WD ++ F +F G H + GYS + LAEGLDI+L + V+ + Y SG EV
Sbjct: 547 LSLKHWDQDDDF-EFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAV 605
Query: 380 TTDGTG----YSAQKVLVTVPLALL--QKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQ 433
T T Y VL T+PL +L Q A+QF PPL E K A+ +G G + K+ L
Sbjct: 606 NTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLC 665
Query: 434 FPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLD 493
F FWD V + FGHV + + RG +F+++ K +L++++AGEA + +
Sbjct: 666 FDRVFWDPSV---NLFGHVGSTTASRGELFLFWNL---YKAPILLALVAGEAAGIMENIS 719
Query: 494 DKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAED 553
D ++ +C+A L+ +F VP P + V+RW DPW + +YS+V G SG YD++A+
Sbjct: 720 DDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQP 779
Query: 554 IQ------------GTVFFAGEATNRHFPQTVTGAYLSGVREASKIA 588
I +FFAGE T R++P TV GA LSG+REA +IA
Sbjct: 780 ITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIA 826
Score = 73.6 bits (179), Expect = 5e-13
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 217 VERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKV 276
V R+ ++ R GLIN G+ LP K VIIIG+G +GLAAARQL +FG+ V
Sbjct: 249 VHRVHSYLERHGLINFGIYKRIKP---LPTKKTGK-VIIIGSGVSGLAAARQLQSFGMDV 304
Query: 277 TVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQVS 323
T+LEA+DR+GGRV + V GA +V G NP+A++ +QV+
Sbjct: 305 TLLEARDRVGGRVATFRKGNYV-ADLGAMVVTGLGGNPMAVVSKQVN 350
>gi|28559074 spermine oxidase isoform 1 [Homo sapiens]
Length = 555
Score = 107 bits (266), Expect = 4e-23
Identities = 88/321 (27%), Positives = 135/321 (42%), Gaps = 68/321 (21%)
Query: 333 FAQFAGDHTLLTPGYSVIIEKLAEGLD---IQLKSPVQCIDYS----------------G 373
+ + G H ++ G+ ++E LAEG+ IQL PV+CI + G
Sbjct: 225 WTEIPGAHHIIPSGFMRVVELLAEGIPAHVIQLGKPVRCIHWDQASARPRGPEIEPRGEG 284
Query: 374 DEVQVTTTDGTG--------------------------YSAQKVLVTVPLALLQKGAIQF 407
D T G G A V+VTV L +L++ F
Sbjct: 285 DHNHDTGEGGQGGEEPRGGRWDEDEQWSVVVECEDCELIPADHVIVTVSLGVLKRQYTSF 344
Query: 408 -NPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGH---------VPPSAS 457
P L +K+ AI+ LG G +KI L+F FW + F PP
Sbjct: 345 FRPGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQFVWEDEAESHTLTYPPELW 404
Query: 458 KRGL--FAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVP 515
R + F V Y P++ VL I GE + DD+ V + C LR+ +P
Sbjct: 405 YRKICGFDVLYP--PERYGHVLSGWICGEEALVMEKCDDEAVAEICTEMLRQFTGNPNIP 462
Query: 516 DPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGT---------VFFAGEATN 566
P + + W ++P+ + +YS+ + G SG + +A+ + T V F+GEAT+
Sbjct: 463 KPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYTESSKTAPMQVLFSGEATH 522
Query: 567 RHFPQTVTGAYLSGVREASKI 587
R + T GA LSG REA+++
Sbjct: 523 RKYYSTTHGALLSGQREAARL 543
Score = 47.0 bits (110), Expect = 5e-05
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 253 VIIIGAGPAGLAAARQLHNFGI-KVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCI 311
V++IGAG AGLAAA+ L G VTVLEA IGGRV K T GA ++G
Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVK-LGHATFELGATWIHGSH 85
Query: 312 NNPVALMCE 320
NP+ + E
Sbjct: 86 GNPIYHLAE 94
>gi|28559076 spermine oxidase isoform 2 [Homo sapiens]
Length = 502
Score = 105 bits (262), Expect = 1e-22
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Query: 333 FAQFAGDHTLLTPGYSVIIEKLAEGLD---IQLKSPVQCIDYSGDEVQVTTTDGTGYSAQ 389
+ + G H ++ G+ ++E LAEG+ IQL PV+CI + + +
Sbjct: 225 WTEIPGAHHIIPSGFMRVVELLAEGIPAHVIQLGKPVRCIHWDQASARPRGPE------- 277
Query: 390 KVLVTVPLALLQKGAIQF-NPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADF 448
P +L++ F P L +K+ AI+ LG G +KI L+F FW + F
Sbjct: 278 ----IEPRGVLKRQYTSFFRPGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQF 333
Query: 449 FGH---------VPPSASKRGL--FAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQV 497
PP R + F V Y P++ VL I GE + DD+ V
Sbjct: 334 VWEDEAESHTLTYPPELWYRKICGFDVLYP--PERYGHVLSGWICGEEALVMEKCDDEAV 391
Query: 498 LQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGT 557
+ C LR+ +P P + + W ++P+ + +YS+ + G SG + +A+ + T
Sbjct: 392 AEICTEMLRQFTGNPNIPKPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYT 451
Query: 558 ---------VFFAGEATNRHFPQTVTGAYLSGVREASKI 587
V F+GEAT+R + T GA LSG REA+++
Sbjct: 452 ESSKTAPMQVLFSGEATHRKYYSTTHGALLSGQREAARL 490
Score = 47.0 bits (110), Expect = 5e-05
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 253 VIIIGAGPAGLAAARQLHNFGI-KVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCI 311
V++IGAG AGLAAA+ L G VTVLEA IGGRV K T GA ++G
Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVK-LGHATFELGATWIHGSH 85
Query: 312 NNPVALMCE 320
NP+ + E
Sbjct: 86 GNPIYHLAE 94
>gi|23097272 polyamine oxidase isoform 1 [Homo sapiens]
Length = 511
Score = 100 bits (248), Expect = 5e-21
Identities = 87/290 (30%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 338 GDHTLLTPGYSVIIEKLAEGLD-----------IQLKSPVQCIDYSGD-----------E 375
G++T+L PG K +GL + + PV+ I ++G
Sbjct: 209 GEYTVL-PGLDCTFSKGYQGLTNCMMAALPEDTVVFEKPVKTIHWNGSFQEAAFPGETFP 267
Query: 376 VQVTTTDGTGYSAQKVLVTVPLALLQKGAIQF-NPPLSEKKMKAINSLGAGIIEKIALQF 434
V V DG + A V+VTVPL L++ F +PPL +K +AI +G G KI L+F
Sbjct: 268 VSVECEDGDRFPAHHVIVTVPLGFLREHLDTFFDPPLPAEKAEAIRKIGFGTNNKIFLEF 327
Query: 435 PYRFWDSKVQGADF-FGHVPP---------SASKRGLFAVFYDMDPQKKHSVLMSVIAGE 484
FW+ Q + P A R L F + VL IAG
Sbjct: 328 EEPFWEPDCQLIQLVWEDTSPLEDAAPELQDAWFRKLIG-FVVLPAFASVHVLCGFIAGL 386
Query: 485 AVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSG 544
+ TL D++VL LR + +P P +RW + P+ + +YS+V G +G
Sbjct: 387 ESEFMETLSDEEVLLCLTQVLRRVTGNPRLPAPKSVLRSRWHSAPYTRGSYSYVAVGSTG 446
Query: 545 EAYDIIAEDI-------QGTVFFAGEATNRHFPQTVTGAYLSGVREASKI 587
D++A+ + Q + FAGEAT+R F T GA LSG REA ++
Sbjct: 447 GDLDLLAQPLPADGAGAQLQILFAGEATHRTFYSTTHGALLSGWREADRL 496
Score = 40.4 bits (93), Expect = 0.005
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 253 VIIIGAGPAGLAAARQL--HNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNG- 309
V+++G G AGL AA++L H+ + VLEA R GGR+ ++ F GV V GA ++G
Sbjct: 16 VLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCFGGV-VEVGAHWIHGP 74
Query: 310 CINNPV 315
NPV
Sbjct: 75 SRGNPV 80
>gi|28559080 spermine oxidase isoform 4 [Homo sapiens]
Length = 532
Score = 94.0 bits (232), Expect = 4e-19
Identities = 78/309 (25%), Positives = 126/309 (40%), Gaps = 67/309 (21%)
Query: 333 FAQFAGDHTLLTPGYSVIIEKLAEGLD---IQLKSPVQCIDYSGDEVQVTTTDGTGYSAQ 389
+ + G H ++ G+ ++E LAEG+ IQL PV+CI + + +
Sbjct: 225 WTEIPGAHHIIPSGFMRVVELLAEGIPAHVIQLGKPVRCIHWDQASARPRGPE------- 277
Query: 390 KVLVTVPLALLQKGAIQF-NPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADF 448
P +L++ F P L +K+ AI+ LG G +KI L+F FW + F
Sbjct: 278 ----IEPRGVLKRQYTSFFRPGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQF 333
Query: 449 FGH---------VPPSASKRGL--FAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQV 497
PP R + F V Y P++ VL I GE + DD+ V
Sbjct: 334 VWEDEAESHTLTYPPELWYRKICGFDVLYP--PERYGHVLSGWICGEEALVMEKCDDEAV 391
Query: 498 LQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGT 557
+ C LR+ +P P + + W ++P+ + +YS+ + G SG + +A+ + T
Sbjct: 392 AEICTEMLRQFTGNPNIPKPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYT 451
Query: 558 ---------------------------------------VFFAGEATNRHFPQTVTGAYL 578
V F+GEAT+R + T GA L
Sbjct: 452 ESSKTAHGSSTKQQPGHLFSSKCPEQPLDANRGAVKPMQVLFSGEATHRKYYSTTHGALL 511
Query: 579 SGVREASKI 587
SG REA+++
Sbjct: 512 SGQREAARL 520
Score = 47.0 bits (110), Expect = 5e-05
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 253 VIIIGAGPAGLAAARQLHNFGI-KVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCI 311
V++IGAG AGLAAA+ L G VTVLEA IGGRV K T GA ++G
Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVK-LGHATFELGATWIHGSH 85
Query: 312 NNPVALMCE 320
NP+ + E
Sbjct: 86 GNPIYHLAE 94
>gi|38202207 monoamine oxidase B [Homo sapiens]
Length = 520
Score = 66.6 bits (161), Expect = 6e-11
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 8/252 (3%)
Query: 338 GDHTLLTPGYSVIIEKLAE--GLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTV 395
G G + E++ + G ++L+ PV ID + + V V T + Y A+ V+ +
Sbjct: 205 GQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAI 264
Query: 396 PLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPS 455
P L K I FNPPL + + I + G + K + + FW K D+ G +
Sbjct: 265 PPTLGMK--IHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK----DYCGTMIID 318
Query: 456 ASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVP 515
+ + D P+ ++ +M I + L ++ L++ ++ E
Sbjct: 319 GEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLEAL 378
Query: 516 DPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTG 575
+P Y W + + Y+ G Y + ++FAG T H+ + G
Sbjct: 379 EPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEG 438
Query: 576 AYLSGVREASKI 587
A +G R A +I
Sbjct: 439 AVEAGERAAREI 450
Score = 54.7 bits (130), Expect = 2e-07
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 253 VIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCIN 312
V+++G G +G+AAA+ LH+ G+ V VLEA+DR+GGR + ++ K V G V G
Sbjct: 7 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYV-GPTQ 65
Query: 313 NPVALMCEQVSARSWDHNE 331
N + + +++ ++ NE
Sbjct: 66 NRILRLAKELGLETYKVNE 84
>gi|4557735 monoamine oxidase A [Homo sapiens]
Length = 527
Score = 59.3 bits (142), Expect = 1e-08
Identities = 53/252 (21%), Positives = 92/252 (36%), Gaps = 8/252 (3%)
Query: 338 GDHTLLTPGYSVIIEKLAE--GLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTV 395
G G + E++ + G ++L PV +D S D + + T + Y + V+ +
Sbjct: 214 GQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQSSDNIIIETLNHEHYECKYVINAI 273
Query: 396 PLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPS 455
P L K I F P L ++ + I L G + K + + FW K D+ G +
Sbjct: 274 PPTLTAK--IHFRPELPAERNQLIQRLPMGAVIKCMMYYKEAFWKKK----DYCGCMIIE 327
Query: 456 ASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVP 515
+ D P +M I + L + ++ ++ QE
Sbjct: 328 DEDAPISITLDDTKPDGSLPAIMGFILARKADRLAKLHKEIRKKKICELYAKVLGSQEAL 387
Query: 516 DPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTG 575
P Y W + + Y+ G Y + G +FFAG T + + G
Sbjct: 388 HPVHYEEKNWCEEQYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATKWSGYMEG 447
Query: 576 AYLSGVREASKI 587
A +G R A ++
Sbjct: 448 AVEAGERAAREV 459
Score = 48.9 bits (115), Expect = 1e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 249 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVW 290
H V++IG G +GL+AA+ L +G+ V VLEA+DR+GGR +
Sbjct: 12 HMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTY 53
>gi|46397310 polyamine oxidase isoform 4 [Homo sapiens]
Length = 486
Score = 52.4 bits (124), Expect = 1e-06
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 24/130 (18%)
Query: 338 GDHTLLTPGYSVIIEKLAEGLD-----------IQLKSPVQCIDYSGD-----------E 375
G++T+L PG K +GL + + PV+ I ++G
Sbjct: 209 GEYTVL-PGLDCTFSKGYQGLTNCMMAALPEDTVVFEKPVKTIHWNGSFQEAAFPGETFP 267
Query: 376 VQVTTTDGTGYSAQKVLVTVPLALLQKGAIQF-NPPLSEKKMKAINSLGAGIIEKIALQF 434
V V DG + A V+VTVPL L++ F +PPL +K +AI +G G KI L+F
Sbjct: 268 VSVECEDGDRFPAHHVIVTVPLGFLREHLDTFFDPPLPAEKAEAIRKIGFGTNNKIFLEF 327
Query: 435 PYRFWDSKVQ 444
FW+ Q
Sbjct: 328 EEPFWEPDCQ 337
Score = 40.4 bits (93), Expect = 0.005
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 253 VIIIGAGPAGLAAARQL--HNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNG- 309
V+++G G AGL AA++L H+ + VLEA R GGR+ ++ F GV V GA ++G
Sbjct: 16 VLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCFGGV-VEVGAHWIHGP 74
Query: 310 CINNPV 315
NPV
Sbjct: 75 SRGNPV 80
>gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo
sapiens]
Length = 567
Score = 49.3 bits (116), Expect = 1e-05
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Query: 234 VLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVW 290
V++ G ++ L P+ VI++GAG AGL AA+ L + G KVT+LEA +RIGGR++
Sbjct: 48 VVTWGLNRTLKPQ-----RVIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIF 99
Score = 32.7 bits (73), Expect = 0.96
Identities = 62/258 (24%), Positives = 103/258 (39%), Gaps = 22/258 (8%)
Query: 340 HTLLTPGYSVIIEKLAEGLD--IQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 397
++ + G+ ++ L L + L +PV + +V V KVL +
Sbjct: 259 YSRIVGGWDLLPRALLSSLSGLVLLNAPVVAMTQGPHDVHVQIETSPPARNLKVLKADVV 318
Query: 398 ALLQKGA----IQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFW-DSKVQGADFFGHV 452
L G I F+PPL +A+ L K+ L F FW + ++G GH
Sbjct: 319 LLTASGPAVKRITFSPPLPRHMQEALRRLHYVPATKVFLSFRRPFWREEHIEG----GH- 373
Query: 453 PPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKE- 511
S + R +FY P++ +L S +A A+ L ++ L+ + + L
Sbjct: 374 --SNTDRPSRMIFYP-PPREGALLLASYTWSDAAAAFAGLSREEALRLALDDVAALHGPV 430
Query: 512 -QEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFP 570
+++ D T V RW+ D Q + V+ + G ++FAGE T +P
Sbjct: 431 VRQLWDGTG-VVKRWAEDQHSQGGF-VVQPPALWQTEKDDWTVPYGRIYFAGEHT--AYP 486
Query: 571 Q-TVTGAYLSGVREASKI 587
V A S +R A KI
Sbjct: 487 HGWVETAVKSALRAAIKI 504
>gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens]
Length = 589
Score = 49.3 bits (116), Expect = 1e-05
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Query: 234 VLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVW 290
V++ G ++ L P+ VI++GAG AGL AA+ L + G KVT+LEA +RIGGR++
Sbjct: 70 VVTWGLNRTLKPQ-----RVIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIF 121
Score = 32.7 bits (73), Expect = 0.96
Identities = 62/258 (24%), Positives = 103/258 (39%), Gaps = 22/258 (8%)
Query: 340 HTLLTPGYSVIIEKLAEGLD--IQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 397
++ + G+ ++ L L + L +PV + +V V KVL +
Sbjct: 281 YSRIVGGWDLLPRALLSSLSGLVLLNAPVVAMTQGPHDVHVQIETSPPARNLKVLKADVV 340
Query: 398 ALLQKGA----IQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFW-DSKVQGADFFGHV 452
L G I F+PPL +A+ L K+ L F FW + ++G GH
Sbjct: 341 LLTASGPAVKRITFSPPLPRHMQEALRRLHYVPATKVFLSFRRPFWREEHIEG----GH- 395
Query: 453 PPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKE- 511
S + R +FY P++ +L S +A A+ L ++ L+ + + L
Sbjct: 396 --SNTDRPSRMIFYP-PPREGALLLASYTWSDAAAAFAGLSREEALRLALDDVAALHGPV 452
Query: 512 -QEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFP 570
+++ D T V RW+ D Q + V+ + G ++FAGE T +P
Sbjct: 453 VRQLWDGTG-VVKRWAEDQHSQGGF-VVQPPALWQTEKDDWTVPYGRIYFAGEHT--AYP 508
Query: 571 Q-TVTGAYLSGVREASKI 587
V A S +R A KI
Sbjct: 509 HGWVETAVKSALRAAIKI 526
>gi|28559078 spermine oxidase isoform 3 [Homo sapiens]
Length = 190
Score = 47.0 bits (110), Expect = 5e-05
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 253 VIIIGAGPAGLAAARQLHNFGI-KVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCI 311
V++IGAG AGLAAA+ L G VTVLEA IGGRV K T GA ++G
Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVK-LGHATFELGATWIHGSH 85
Query: 312 NNPVALMCE 320
NP+ + E
Sbjct: 86 GNPIYHLAE 94
Score = 36.2 bits (82), Expect = 0.087
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 545 EAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKI 587
E D+ E +Q V F+GEAT+R + T GA LSG REA+++
Sbjct: 138 EFSDLYNEPMQ--VLFSGEATHRKYYSTTHGALLSGQREAARL 178
>gi|46397308 polyamine oxidase isoform 2 [Homo sapiens]
Length = 325
Score = 40.4 bits (93), Expect = 0.005
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 253 VIIIGAGPAGLAAARQL--HNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNG- 309
V+++G G AGL AA++L H+ + VLEA R GGR+ ++ F GV V GA ++G
Sbjct: 16 VLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCFGGV-VEVGAHWIHGP 74
Query: 310 CINNPV 315
NPV
Sbjct: 75 SRGNPV 80
>gi|33519426 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 35.8 bits (81), Expect = 0.11
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 244 LPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLE 280
LPK Y + +IIIG G GLAAA++ +G KV VL+
Sbjct: 7 LPKSY-DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLD 42
>gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens]
Length = 649
Score = 35.8 bits (81), Expect = 0.11
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 244 LPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLE 280
LPK Y + +IIIG G GLAAA++ +G KV VL+
Sbjct: 157 LPKSY-DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLD 192
>gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens]
Length = 551
Score = 35.8 bits (81), Expect = 0.11
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 244 LPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLE 280
LPK Y + +IIIG G GLAAA++ +G KV VL+
Sbjct: 59 LPKSY-DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLD 94
>gi|33519430 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 35.8 bits (81), Expect = 0.11
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 244 LPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLE 280
LPK Y + +IIIG G GLAAA++ +G KV VL+
Sbjct: 7 LPKSY-DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLD 42
>gi|33519428 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 35.8 bits (81), Expect = 0.11
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 244 LPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLE 280
LPK Y + +IIIG G GLAAA++ +G KV VL+
Sbjct: 7 LPKSY-DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLD 42
>gi|62865635 squalene epoxidase [Homo sapiens]
Length = 574
Score = 35.8 bits (81), Expect = 0.11
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 12/96 (12%)
Query: 226 RKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLE----A 281
RKG + +G ++ VII+GAG G A A L G KVTV+E
Sbjct: 99 RKGTNISETSLIGTAACTSTSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKE 158
Query: 282 KDRI--------GGRVWDDKSFKGVTVGRGAQIVNG 309
DRI G V D G AQ+VNG
Sbjct: 159 PDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNG 194
>gi|229577391 pyridine nucleotide-disulphide oxidoreductase domain 2
[Homo sapiens]
Length = 581
Score = 35.4 bits (80), Expect = 0.15
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 254 IIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVN 308
++IGAG GL AA L G+ V E + IGG ++ G R + +++
Sbjct: 38 VVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLLS 92
>gi|170172518 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 3 [Homo sapiens]
Length = 966
Score = 35.0 bits (79), Expect = 0.19
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 250 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKD 283
N +IIGAGP GL A L G KV V+E +D
Sbjct: 86 NTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRD 119
>gi|209862793 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 2 [Homo sapiens]
Length = 1073
Score = 35.0 bits (79), Expect = 0.19
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 250 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKD 283
N +IIGAGP GL A L G KV V+E +D
Sbjct: 86 NTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRD 119
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 35.0 bits (79), Expect = 0.19
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 250 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKD 283
N +IIGAGP GL A L G KV V+E +D
Sbjct: 86 NTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRD 119
>gi|7662284 microtubule associated monoxygenase, calponin and LIM
domain containing 2 [Homo sapiens]
Length = 1124
Score = 35.0 bits (79), Expect = 0.19
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 241 QYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKD 283
+Y K N +I+G GP GL A +L G KV V+E +D
Sbjct: 77 EYKRGKSCTNTKCLIVGGGPCGLRTAIELAYLGAKVVVVEKRD 119
>gi|7661950 SH2 domain binding protein 1 [Homo sapiens]
Length = 1173
Score = 33.9 bits (76), Expect = 0.43
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 7 RTKKKASFDH-----SPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRK 52
R+KK FD + D LP+ ++ K +E EDE+GG KK ++
Sbjct: 910 RSKKGGEFDEFVNDDTDDDLPISKKKKRRKGSGSEQEGEDEEGGERKKKKR 960
>gi|50541961 flavin containing monooxygenase 3 isoform 2 [Homo
sapiens]
Length = 532
Score = 33.1 bits (74), Expect = 0.73
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 251 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGC 310
K V IIGAG +GLA+ R G++ T E + IGG +W K GR + +
Sbjct: 3 KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGG-LW--KFSDHAEEGRASIYKSVF 59
Query: 311 INNPVALMC 319
N+ +MC
Sbjct: 60 SNSSKEMMC 68
>gi|50541965 flavin containing monooxygenase 3 isoform 1 [Homo
sapiens]
Length = 532
Score = 33.1 bits (74), Expect = 0.73
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 251 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGC 310
K V IIGAG +GLA+ R G++ T E + IGG +W K GR + +
Sbjct: 3 KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGG-LW--KFSDHAEEGRASIYKSVF 59
Query: 311 INNPVALMC 319
N+ +MC
Sbjct: 60 SNSSKEMMC 68
>gi|119703746 electron-transferring-flavoprotein dehydrogenase
precursor [Homo sapiens]
Length = 617
Score = 32.7 bits (73), Expect = 0.96
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 11/55 (20%)
Query: 253 VIIIGAGPAGLAAARQL------HNFGIKVTVLEAKDRIG-----GRVWDDKSFK 296
V+I+GAGPAGL+AA +L H I+V ++E +IG G D +FK
Sbjct: 71 VVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFK 125
>gi|5902054 ring finger protein 5 [Homo sapiens]
Length = 180
Score = 32.3 bits (72), Expect = 1.3
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 10/66 (15%)
Query: 40 EDEDGGSEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHY 99
E+EDGG E R+ AG T C +C +A E CG +C C +
Sbjct: 5 EEEDGGPEGPNRERGGAGATFECNICLETAREAVVS----------VCGHLYCWPCLHQW 54
Query: 100 YRSHKD 105
+ +
Sbjct: 55 LETRPE 60
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,109,076
Number of Sequences: 37866
Number of extensions: 1096008
Number of successful extensions: 2897
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2817
Number of HSP's gapped (non-prelim): 70
length of query: 590
length of database: 18,247,518
effective HSP length: 108
effective length of query: 482
effective length of database: 14,157,990
effective search space: 6824151180
effective search space used: 6824151180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.