Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239740980
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239740980 PREDICTED: hypothetical protein XP_002344293 [Homo
sapiens]
(616 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239740980 PREDICTED: hypothetical protein XP_002344293 [Homo ... 1288 0.0
gi|239753062 PREDICTED: hypothetical protein [Homo sapiens] 1188 0.0
gi|169171899 PREDICTED: similar to hCG2014367 [Homo sapiens] 1118 0.0
gi|169171130 PREDICTED: hypothetical protein LOC100130600 [Homo ... 1115 0.0
gi|239509024 PREDICTED: similar to hCG2014367 [Homo sapiens] 1115 0.0
gi|169171432 PREDICTED: similar to hCG2014367 [Homo sapiens] 1112 0.0
gi|239747616 PREDICTED: similar to hCG1996386 [Homo sapiens] 509 e-144
gi|169162775 PREDICTED: similar to hCG1996386 [Homo sapiens] 509 e-144
gi|239742769 PREDICTED: hypothetical protein XP_002342619 [Homo ... 462 e-130
gi|112421108 capicua homolog [Homo sapiens] 223 5e-58
gi|169171742 PREDICTED: hypothetical protein LOC442676 [Homo sap... 161 2e-39
gi|169172340 PREDICTED: hypothetical protein LOC442676 [Homo sap... 161 2e-39
gi|169170016 PREDICTED: hypothetical protein LOC442676 [Homo sap... 159 5e-39
gi|239508816 PREDICTED: hypothetical protein LOC442676 [Homo sap... 159 5e-39
gi|14149805 hypothetical protein LOC84080 [Homo sapiens] 37 0.041
gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo sa... 37 0.054
gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo sap... 37 0.054
gi|33946327 nucleoporin 214kDa [Homo sapiens] 36 0.091
gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo sa... 35 0.16
gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo sap... 35 0.16
gi|223633935 hypothetical protein LOC254427 [Homo sapiens] 35 0.27
gi|6912414 hairy/enhancer-of-split related with YRPW motif 2 [Ho... 34 0.35
gi|91982772 mucin 17 [Homo sapiens] 34 0.45
gi|163965366 nascent polypeptide-associated complex alpha subuni... 33 0.59
gi|66529407 tensin [Homo sapiens] 33 0.77
gi|55741655 anoctamin 8 [Homo sapiens] 33 1.0
gi|4885455 SH2B adaptor protein 3 [Homo sapiens] 33 1.0
gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens] 32 1.3
gi|208022661 hypothetical protein LOC57701 [Homo sapiens] 32 1.3
gi|21361411 HMG-box transcription factor 1 [Homo sapiens] 32 1.3
>gi|239740980 PREDICTED: hypothetical protein XP_002344293 [Homo
sapiens]
Length = 616
Score = 1288 bits (3334), Expect = 0.0
Identities = 616/616 (100%), Positives = 616/616 (100%)
Query: 1 MQWLMLPPWLRRGRGGVSPCQEPPARTKCSAPRPAFSEASRGVSMFVWRNVEGHSAAVFS 60
MQWLMLPPWLRRGRGGVSPCQEPPARTKCSAPRPAFSEASRGVSMFVWRNVEGHSAAVFS
Sbjct: 1 MQWLMLPPWLRRGRGGVSPCQEPPARTKCSAPRPAFSEASRGVSMFVWRNVEGHSAAVFS 60
Query: 61 WYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQSLSALRKEQDSSSEKD 120
WYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQSLSALRKEQDSSSEKD
Sbjct: 61 WYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQSLSALRKEQDSSSEKD 120
Query: 121 GRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEM 180
GRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEM
Sbjct: 121 GRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEM 180
Query: 181 QKYNLAFQECNKGSWERSISETGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHS 240
QKYNLAFQECNKGSWERSISETGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHS
Sbjct: 181 QKYNLAFQECNKGSWERSISETGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHS 240
Query: 241 QGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAP 300
QGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAP
Sbjct: 241 QGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAP 300
Query: 301 GEGVYGHTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQRSRAGPLRPQPLGMGAQG 360
GEGVYGHTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQRSRAGPLRPQPLGMGAQG
Sbjct: 301 GEGVYGHTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQRSRAGPLRPQPLGMGAQG 360
Query: 361 RLPRGNPTDMDPTLEDPTAPKCKTRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRL 420
RLPRGNPTDMDPTLEDPTAPKCKTRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRL
Sbjct: 361 RLPRGNPTDMDPTLEDPTAPKCKTRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRL 420
Query: 421 REPETEKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVGVLTAPHLAQTLDAALAA 480
REPETEKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVGVLTAPHLAQTLDAALAA
Sbjct: 421 REPETEKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVGVLTAPHLAQTLDAALAA 480
Query: 481 PPLLLPESHAGGQPQRSQDSQYPLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVH 540
PPLLLPESHAGGQPQRSQDSQYPLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVH
Sbjct: 481 PPLLLPESHAGGQPQRSQDSQYPLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVH 540
Query: 541 TMNCGTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLSPEGLDSEHVDRGR 600
TMNCGTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLSPEGLDSEHVDRGR
Sbjct: 541 TMNCGTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLSPEGLDSEHVDRGR 600
Query: 601 YFSLCQKVAMTVIKPV 616
YFSLCQKVAMTVIKPV
Sbjct: 601 YFSLCQKVAMTVIKPV 616
>gi|239753062 PREDICTED: hypothetical protein [Homo sapiens]
Length = 811
Score = 1188 bits (3073), Expect = 0.0
Identities = 576/612 (94%), Positives = 585/612 (95%), Gaps = 2/612 (0%)
Query: 7 PPWLRRGRGGVSPCQEPPARTKCSAPRPAFSEASRGVSMFVWRNVEGHSAAVFSWYSIPF 66
PPWLRRGRGGVSPCQEPPARTK SAPRPAFSEASRGVSMFVWRNVEGHS AVF WYSIPF
Sbjct: 200 PPWLRRGRGGVSPCQEPPARTKYSAPRPAFSEASRGVSMFVWRNVEGHSVAVFPWYSIPF 259
Query: 67 LTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQSLSALRKEQDSSSEKDGRSPNK 126
LTPPCSH RPS LPVTQWPPTRENNLPSWQ LLMSVHQSLSALRKEQDSSSEKDGRSPNK
Sbjct: 260 LTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNK 319
Query: 127 SDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKYNLA 186
DKDHI WPMSG+H+LQQAAPGPG AHQGHPNQDNRT+SQMLSE+WYTLGPNEMQKY+LA
Sbjct: 320 WDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKYDLA 379
Query: 187 FQECNKGSWERSISETGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQGTWLS 246
FQECNKGSWE SISE GTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQ TWLS
Sbjct: 380 FQECNKGSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQETWLS 439
Query: 247 LAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAPGEG-VY 305
LAQAFSHSGVHSLDGREIDRQAL+ELTQVVSGTASYSGPKPSTQ+GAPGHFAAP G VY
Sbjct: 440 LAQAFSHSGVHSLDGREIDRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVY 499
Query: 306 GHTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQRSRAGPLRPQPLGMGAQGRLPRG 365
G TLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQ SRAGPLRP PLGMGAQGRLPRG
Sbjct: 500 GPTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLPRG 559
Query: 366 NPTDMDPTLEDPTAPKCKTRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRLREPET 425
NPTDMDPTLEDPT P+CK RRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRLREPET
Sbjct: 560 NPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRLREPET 619
Query: 426 EKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVGVLTAPHLAQTLDAALAAPPLLL 485
EKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVG LT PHLAQTLDAAL APPL L
Sbjct: 620 EKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVGFLTGPHLAQTLDAALVAPPLPL 679
Query: 486 PESHAGGQPQ-RSQDSQYPLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNC 544
PESHAGG+PQ RSQDSQYPLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNC
Sbjct: 680 PESHAGGRPQRRSQDSQYPLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNC 739
Query: 545 GTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLSPEGLDSEHVDRGRYFSL 604
GTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLS EGLDSEHVD GRYFSL
Sbjct: 740 GTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLSSEGLDSEHVDHGRYFSL 799
Query: 605 CQKVAMTVIKPV 616
CQKVAMTVIKPV
Sbjct: 800 CQKVAMTVIKPV 811
>gi|169171899 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 1118 bits (2891), Expect = 0.0
Identities = 548/584 (93%), Positives = 554/584 (94%), Gaps = 2/584 (0%)
Query: 35 AFSEASRGVSMFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPS 94
A SEAS GVSMFVWRNVE S AVFSWYS+PFLTPPCS+ R SNLPVTQWPPTR NLPS
Sbjct: 11 ASSEASSGVSMFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWPPTRAKNLPS 70
Query: 95 WQPLLMSVHQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQ 154
Q LLMSVHQSLSALRKEQDSSSEKDG SPNK DKDHIRWPMSG HDLQQAAPGPG AHQ
Sbjct: 71 QQLLLMSVHQSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQ 130
Query: 155 GHPNQDNRTVSQMLSERWYTLGPNEMQKYN-LAFQECNKGSWERSISETGTATAPGVSSE 213
GHPNQDNRTVSQMLS+RWYTLGPNE QKY+ LAFQECNKGSWER ISETGTATAPGVSSE
Sbjct: 131 GHPNQDNRTVSQMLSKRWYTLGPNETQKYHDLAFQECNKGSWERRISETGTATAPGVSSE 190
Query: 214 LLSVAAQTLQSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT 273
LLSVAAQTLQSSDTKEQLLWGR AAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT
Sbjct: 191 LLSVAAQTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT 250
Query: 274 QVVSGTASYSGPKPSTQHGAPGHFAAPGEG-VYGHTLSSSYTYSDASSSTLAPTSFLLGP 332
QVVSGTASYSGPKPSTQ+GAPGHFAAP G VYG TLSSSYTYSDASSSTLAPTSFLLGP
Sbjct: 251 QVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGP 310
Query: 333 GAFKAQESGQRSRAGPLRPQPLGMGAQGRLPRGNPTDMDPTLEDPTAPKCKTRRCSSCSP 392
GAF AQESGQ SRAGPLRP PLGMGAQGRLPRGNPTDMDPTLEDPT PKCK RRCSSCSP
Sbjct: 311 GAFNAQESGQGSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPKCKMRRCSSCSP 370
Query: 393 KPNTPKCAMCDGDSFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHYAHIFPSKVC 452
KPNTPKCAMCDGDSFPFACTGGEA+DRLREPETEKALSSSLHATAALQAHYAHIFPSKVC
Sbjct: 371 KPNTPKCAMCDGDSFPFACTGGEAKDRLREPETEKALSSSLHATAALQAHYAHIFPSKVC 430
Query: 453 SAPALTPSPVGVLTAPHLAQTLDAALAAPPLLLPESHAGGQPQRSQDSQYPLRTWTVCGG 512
SAPALTPSPVGVLTAPHLAQTLDAALAAPPL LPESHAGGQPQRSQDSQYPLRTWTVCGG
Sbjct: 431 SAPALTPSPVGVLTAPHLAQTLDAALAAPPLPLPESHAGGQPQRSQDSQYPLRTWTVCGG 490
Query: 513 SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ 572
SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ
Sbjct: 491 SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ 550
Query: 573 GGACGLGGVHAPLLSPEGLDSEHVDRGRYFSLCQKVAMTVIKPV 616
GGACGLGGVHAPLLSPEGLDSEHVD GRYFSLCQKVAMTVIKPV
Sbjct: 551 GGACGLGGVHAPLLSPEGLDSEHVDHGRYFSLCQKVAMTVIKPV 594
>gi|169171130 PREDICTED: hypothetical protein LOC100130600 [Homo
sapiens]
Length = 594
Score = 1115 bits (2883), Expect = 0.0
Identities = 547/584 (93%), Positives = 553/584 (94%), Gaps = 2/584 (0%)
Query: 35 AFSEASRGVSMFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPS 94
A SEAS GVSMFVWRNVE S AVFSWYS+PFLTPPCS+ R SNLPVTQWPPTR NLPS
Sbjct: 11 ASSEASSGVSMFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWPPTRAKNLPS 70
Query: 95 WQPLLMSVHQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQ 154
Q LLMSVHQSLSALRKEQDSSSEKDG SPNK DKDHIRWPMSG HDLQQAAPGPG AHQ
Sbjct: 71 QQLLLMSVHQSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQ 130
Query: 155 GHPNQDNRTVSQMLSERWYTLGPNEMQKYN-LAFQECNKGSWERSISETGTATAPGVSSE 213
GHPNQDNRTVSQMLS+RWYTLGPNE QKY+ LAFQECNKGSWER ISETGTATAPGVSSE
Sbjct: 131 GHPNQDNRTVSQMLSKRWYTLGPNETQKYHDLAFQECNKGSWERRISETGTATAPGVSSE 190
Query: 214 LLSVAAQTLQSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT 273
LLSVAAQTLQSSDTKEQLLWGR AAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT
Sbjct: 191 LLSVAAQTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT 250
Query: 274 QVVSGTASYSGPKPSTQHGAPGHFAAPGEG-VYGHTLSSSYTYSDASSSTLAPTSFLLGP 332
QVVSGTASYSGPKPSTQ+GAPGHFAAP G VYG TLSSSYTYSDASSSTLAPTSFLLGP
Sbjct: 251 QVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGP 310
Query: 333 GAFKAQESGQRSRAGPLRPQPLGMGAQGRLPRGNPTDMDPTLEDPTAPKCKTRRCSSCSP 392
GAF AQESGQ SRAGPLRP PLGMGAQGRLPRGNPTDMDPTLEDPT PKCK RRCSSCSP
Sbjct: 311 GAFNAQESGQGSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPKCKMRRCSSCSP 370
Query: 393 KPNTPKCAMCDGDSFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHYAHIFPSKVC 452
KPNTPKCAMCDGDSFPFACTGGEA+DRLREPETEKALSSSLHATAALQAHYAHIFPSKVC
Sbjct: 371 KPNTPKCAMCDGDSFPFACTGGEAKDRLREPETEKALSSSLHATAALQAHYAHIFPSKVC 430
Query: 453 SAPALTPSPVGVLTAPHLAQTLDAALAAPPLLLPESHAGGQPQRSQDSQYPLRTWTVCGG 512
SAPALTPSPVGVLTAPHLAQTLDAALAAPPL LPESHAGGQPQRSQDSQYPLRTWTVCGG
Sbjct: 431 SAPALTPSPVGVLTAPHLAQTLDAALAAPPLPLPESHAGGQPQRSQDSQYPLRTWTVCGG 490
Query: 513 SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ 572
SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ
Sbjct: 491 SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ 550
Query: 573 GGACGLGGVHAPLLSPEGLDSEHVDRGRYFSLCQKVAMTVIKPV 616
GGACGL GVHAPLLSPEGLDSEHVD GRYFSLCQKVAMTVIKPV
Sbjct: 551 GGACGLRGVHAPLLSPEGLDSEHVDHGRYFSLCQKVAMTVIKPV 594
>gi|239509024 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 1115 bits (2883), Expect = 0.0
Identities = 547/584 (93%), Positives = 553/584 (94%), Gaps = 2/584 (0%)
Query: 35 AFSEASRGVSMFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPS 94
A SEAS GVSMFVWRNVE S AVFSWYS+PFLTPPCS+ R SNLPVTQWPPTR NLPS
Sbjct: 11 ASSEASSGVSMFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWPPTRAKNLPS 70
Query: 95 WQPLLMSVHQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQ 154
Q LLMSVHQSLSALRKEQDSSSEKDG SPNK DKDHIRWPMSG HDLQQAAPGPG AHQ
Sbjct: 71 QQLLLMSVHQSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQ 130
Query: 155 GHPNQDNRTVSQMLSERWYTLGPNEMQKYN-LAFQECNKGSWERSISETGTATAPGVSSE 213
GHPNQDNRTVSQMLS+RWYTLGPNE QKY+ LAFQECNKGSWER ISETGTATAPGVSSE
Sbjct: 131 GHPNQDNRTVSQMLSKRWYTLGPNETQKYHDLAFQECNKGSWERRISETGTATAPGVSSE 190
Query: 214 LLSVAAQTLQSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT 273
LLSVAAQTLQSSDTKEQLLWGR AAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT
Sbjct: 191 LLSVAAQTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT 250
Query: 274 QVVSGTASYSGPKPSTQHGAPGHFAAPGEG-VYGHTLSSSYTYSDASSSTLAPTSFLLGP 332
QVVSGTASYSGPKPSTQ+GAPGHFAAP G VYG TLSSSYTYSDASSSTLAPTSFLLGP
Sbjct: 251 QVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGP 310
Query: 333 GAFKAQESGQRSRAGPLRPQPLGMGAQGRLPRGNPTDMDPTLEDPTAPKCKTRRCSSCSP 392
GAF AQESGQ SRAGPLRP PLGMGAQGRLPRGNPTDMDPTLEDPT PKCK RRCSSCSP
Sbjct: 311 GAFNAQESGQGSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPKCKMRRCSSCSP 370
Query: 393 KPNTPKCAMCDGDSFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHYAHIFPSKVC 452
KPNTPKCAMCDGDSFPFACTGGEA+DRLREPETEKALSSSLHATAALQAHYAHIFPSKVC
Sbjct: 371 KPNTPKCAMCDGDSFPFACTGGEAKDRLREPETEKALSSSLHATAALQAHYAHIFPSKVC 430
Query: 453 SAPALTPSPVGVLTAPHLAQTLDAALAAPPLLLPESHAGGQPQRSQDSQYPLRTWTVCGG 512
SAPALTPSPVGVLTAPHLAQTLDAALAAPPL LPESHAGGQPQRSQDSQYPLRTWTVCGG
Sbjct: 431 SAPALTPSPVGVLTAPHLAQTLDAALAAPPLPLPESHAGGQPQRSQDSQYPLRTWTVCGG 490
Query: 513 SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ 572
SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ
Sbjct: 491 SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ 550
Query: 573 GGACGLGGVHAPLLSPEGLDSEHVDRGRYFSLCQKVAMTVIKPV 616
GGACGL GVHAPLLSPEGLDSEHVD GRYFSLCQKVAMTVIKPV
Sbjct: 551 GGACGLRGVHAPLLSPEGLDSEHVDHGRYFSLCQKVAMTVIKPV 594
>gi|169171432 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 1112 bits (2875), Expect = 0.0
Identities = 546/584 (93%), Positives = 552/584 (94%), Gaps = 2/584 (0%)
Query: 35 AFSEASRGVSMFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPS 94
A SEAS GVSMFVWRNVE S AVFSWYS+PFLTPPCS+ R SNLPVTQWPPTR NLPS
Sbjct: 11 ASSEASSGVSMFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWPPTRAKNLPS 70
Query: 95 WQPLLMSVHQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQ 154
Q LLMSVHQSLSALRKEQDSSSEKDG SPNK DKDHIRWPMSG HDLQQAAPGPG AHQ
Sbjct: 71 QQLLLMSVHQSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQ 130
Query: 155 GHPNQDNRTVSQMLSERWYTLGPNEMQKYN-LAFQECNKGSWERSISETGTATAPGVSSE 213
GHPNQDNRTVSQMLS+RWYTLGPNE QKY+ LAFQECNKGSWER ISETGTATAPGVSSE
Sbjct: 131 GHPNQDNRTVSQMLSKRWYTLGPNETQKYHDLAFQECNKGSWERRISETGTATAPGVSSE 190
Query: 214 LLSVAAQTLQSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT 273
LLSVAAQTLQSSDTKEQLLWGR AAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT
Sbjct: 191 LLSVAAQTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELT 250
Query: 274 QVVSGTASYSGPKPSTQHGAPGHFAAPGEG-VYGHTLSSSYTYSDASSSTLAPTSFLLGP 332
QVVSGTASYSGPKPSTQ+GAPGHFAAP G VYG TLSSSYTYSDASSSTLAPTSFLLGP
Sbjct: 251 QVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGP 310
Query: 333 GAFKAQESGQRSRAGPLRPQPLGMGAQGRLPRGNPTDMDPTLEDPTAPKCKTRRCSSCSP 392
GAF AQESGQ SRAGPLRP PLGMGAQGRLPRGNPTDMDPTLEDPT PKCK RRCSSCSP
Sbjct: 311 GAFNAQESGQGSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPKCKMRRCSSCSP 370
Query: 393 KPNTPKCAMCDGDSFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHYAHIFPSKVC 452
KPNTPKCAMCDGDSFP ACTGGEA+DRLREPETEKALSSSLHATAALQAHYAHIFPSKVC
Sbjct: 371 KPNTPKCAMCDGDSFPSACTGGEAKDRLREPETEKALSSSLHATAALQAHYAHIFPSKVC 430
Query: 453 SAPALTPSPVGVLTAPHLAQTLDAALAAPPLLLPESHAGGQPQRSQDSQYPLRTWTVCGG 512
SAPALTPSPVGVLTAPHLAQTLDAALAAPPL LPESHAGGQPQRSQDSQYPLRTWTVCGG
Sbjct: 431 SAPALTPSPVGVLTAPHLAQTLDAALAAPPLPLPESHAGGQPQRSQDSQYPLRTWTVCGG 490
Query: 513 SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ 572
SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ
Sbjct: 491 SNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ 550
Query: 573 GGACGLGGVHAPLLSPEGLDSEHVDRGRYFSLCQKVAMTVIKPV 616
GGACGL GVHAPLLSPEGLDSEHVD GRYFSLCQKVAMTVIKPV
Sbjct: 551 GGACGLRGVHAPLLSPEGLDSEHVDHGRYFSLCQKVAMTVIKPV 594
>gi|239747616 PREDICTED: similar to hCG1996386 [Homo sapiens]
Length = 441
Score = 509 bits (1312), Expect = e-144
Identities = 275/440 (62%), Positives = 300/440 (68%), Gaps = 69/440 (15%)
Query: 45 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 104
MFVWRNVEGHS AVF WYSIPFLTPPCSH RPS LPVTQWPPTRENNLPSWQ LLMSVHQ
Sbjct: 1 MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ 60
Query: 105 --SLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 162
SLSALRKEQDSSSEKDGRSPNK DKDHI WPMSG+H+LQQAAPGPG AHQGHPNQDNR
Sbjct: 61 AQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR 120
Query: 163 TVSQMLSERWYTLGPNEMQKYNLAFQ--ECNKGSWERSISETGTATAPGVSSELLSVAAQ 220
T+SQMLSE+WYTLGPNEMQKY+LAFQ + + + G A PG S +
Sbjct: 121 TISQMLSEQWYTLGPNEMQKYDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRSVTRARGS 180
Query: 221 -------------------TLQSSDTKEQL----LWGRTAAHSQGTWLSLAQAFSHSGVH 257
LQ ++ ++ G H+ +A H+ +H
Sbjct: 181 GAYQRWALPLPLGCPLNSCQLQPKHSRARIPRSSFCGAERLHTHMASEDIASDEEHTVIH 240
Query: 258 SLDG--REIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAPGEGVYGHTLSSSYTY 315
+G + AL LT ++S + ++ VYG TLSSSYTY
Sbjct: 241 EEEGVMMSLLMMALAPLT-LISSSRTFG-------------------KVYGPTLSSSYTY 280
Query: 316 SDASSSTLAPTSFLLGPGAFKAQESGQRSRAGPLRPQPLGMGAQGRLP------------ 363
SDASSSTLAPTSFLLGPGAFKAQESGQ SRAGPLRP PLGMGAQGRLP
Sbjct: 281 SDASSSTLAPTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLPRRSVSSQWILPP 340
Query: 364 --------RGNPTDMDPTLEDPTAPKCKTRRCSSCSPKPNTPKCAMCDGDSFPFACTGGE 415
RGNPTDMDPTLEDPT P+CK RRCSSCSPKPNTPKCAMCDGDSFPFACTGGE
Sbjct: 341 SGARDLKGRGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDSFPFACTGGE 400
Query: 416 AEDRLREPETEKALSSSLHA 435
AEDRLREPETEKALSSSLHA
Sbjct: 401 AEDRLREPETEKALSSSLHA 420
>gi|169162775 PREDICTED: similar to hCG1996386 [Homo sapiens]
Length = 441
Score = 509 bits (1312), Expect = e-144
Identities = 275/440 (62%), Positives = 300/440 (68%), Gaps = 69/440 (15%)
Query: 45 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 104
MFVWRNVEGHS AVF WYSIPFLTPPCSH RPS LPVTQWPPTRENNLPSWQ LLMSVHQ
Sbjct: 1 MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ 60
Query: 105 --SLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 162
SLSALRKEQDSSSEKDGRSPNK DKDHI WPMSG+H+LQQAAPGPG AHQGHPNQDNR
Sbjct: 61 AQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR 120
Query: 163 TVSQMLSERWYTLGPNEMQKYNLAFQ--ECNKGSWERSISETGTATAPGVSSELLSVAAQ 220
T+SQMLSE+WYTLGPNEMQKY+LAFQ + + + G A PG S +
Sbjct: 121 TISQMLSEQWYTLGPNEMQKYDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRSVTRARGS 180
Query: 221 -------------------TLQSSDTKEQL----LWGRTAAHSQGTWLSLAQAFSHSGVH 257
LQ ++ ++ G H+ +A H+ +H
Sbjct: 181 GAYQRWALPLPLGCPLNSCQLQPKHSRARIPRSSFCGAERLHTHMASEDIASDEEHTVIH 240
Query: 258 SLDG--REIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAPGEGVYGHTLSSSYTY 315
+G + AL LT ++S + ++ VYG TLSSSYTY
Sbjct: 241 EEEGVMMSLLMMALAPLT-LISSSRTFG-------------------KVYGPTLSSSYTY 280
Query: 316 SDASSSTLAPTSFLLGPGAFKAQESGQRSRAGPLRPQPLGMGAQGRLP------------ 363
SDASSSTLAPTSFLLGPGAFKAQESGQ SRAGPLRP PLGMGAQGRLP
Sbjct: 281 SDASSSTLAPTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLPRRSVSSQWILPP 340
Query: 364 --------RGNPTDMDPTLEDPTAPKCKTRRCSSCSPKPNTPKCAMCDGDSFPFACTGGE 415
RGNPTDMDPTLEDPT P+CK RRCSSCSPKPNTPKCAMCDGDSFPFACTGGE
Sbjct: 341 SGARDLKGRGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDSFPFACTGGE 400
Query: 416 AEDRLREPETEKALSSSLHA 435
AEDRLREPETEKALSSSLHA
Sbjct: 401 AEDRLREPETEKALSSSLHA 420
>gi|239742769 PREDICTED: hypothetical protein XP_002342619 [Homo
sapiens]
Length = 351
Score = 462 bits (1189), Expect = e-130
Identities = 229/263 (87%), Positives = 232/263 (88%), Gaps = 14/263 (5%)
Query: 45 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 104
MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ
Sbjct: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
Query: 105 --SLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 162
SLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR
Sbjct: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
Query: 163 TVSQMLSERWYTLGPNEMQKYNLAFQ--ECNKGSWERSISETGTATAPGVSSELLSVAAQ 220
TVSQMLSERWYTLGPNEMQKYNLAFQ + + + G A PG S
Sbjct: 121 TVSQMLSERWYTLGPNEMQKYNLAFQVKVAHLQQGPKEVQLRGQAHKPGASR-------- 172
Query: 221 TLQSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTA 280
SSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTA
Sbjct: 173 --SSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTA 230
Query: 281 SYSGPKPSTQHGAPGHFAAPGEG 303
SYSGPKPSTQHGAPGHFAAPGEG
Sbjct: 231 SYSGPKPSTQHGAPGHFAAPGEG 253
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 223 bits (567), Expect = 5e-58
Identities = 137/238 (57%), Positives = 153/238 (64%), Gaps = 40/238 (16%)
Query: 104 QSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRT 163
QSLSAL KE+DSSSEKDGRSPNK +KDHIR PM+ + HQ HPNQDNRT
Sbjct: 172 QSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRAL--VHQRHPNQDNRT 229
Query: 164 VSQMLSERWYTLGPNEMQKY-NLAFQE-------------CNKG---------------- 193
VS++L E WY LGP E QKY +LAFQ CNK
Sbjct: 230 VSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLA 289
Query: 194 -----SWERSISETGTATAPGVSSELLSVAAQTLQSSDTKE--QLLWGRTAAHS-QGTWL 245
+ ERS+SETGTA APGVSSELLSVAAQTL SSDTK G H+ G
Sbjct: 290 GGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSSSCGAERLHTVGGPGS 349
Query: 246 SLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAPGEG 303
+ +AFSHSGVHSLDG E+D QAL+ELTQ+VSG ASYSGPKPSTQ+GAPG FAAPGEG
Sbjct: 350 ARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFAAPGEG 407
Score = 103 bits (257), Expect = 5e-22
Identities = 78/208 (37%), Positives = 86/208 (41%), Gaps = 62/208 (29%)
Query: 349 LRPQPLGMGAQGRLPRGNPTDMDPTLEDPTAPKCKTRRCSSCSPKPNTPKCAMCDGDSFP 408
L P + R R N TD+D EDPT+PK K RR SSCS +PNTPK A C+GD F
Sbjct: 1379 LATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFT 1438
Query: 409 FACTGGEAEDRLREPETEKALSSSL------------------------HATAALQAHYA 444
F TG EAED L E E +K SSL ATAA QA YA
Sbjct: 1439 FDRTGTEAEDVLGELEYDKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYA 1498
Query: 445 HIFPSKVC--------------------------------------SAPALTPSPVGVLT 466
IFPSKVC +APA TPSP G
Sbjct: 1499 DIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPVPPPTGTAAAPAPTPSPAGGPD 1558
Query: 467 APHLAQTLDAALAAPPLLLPESHAGGQP 494
+ A AAPPL P GQP
Sbjct: 1559 PTSPSSDSGTAQAAPPLPPPPESGPGQP 1586
Score = 62.4 bits (150), Expect = 1e-09
Identities = 40/66 (60%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 292 GAPGHFAAPGEGVYGHTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQRSRAGPLRP 351
G P A G+G YG SSS + S ASSS A TSF LG G FKAQESGQ S AGPLRP
Sbjct: 516 GPPDPPVAFGKG-YGSAPSSSAS-SPASSSASAATSFSLGSGTFKAQESGQGSTAGPLRP 573
Query: 352 QPLGMG 357
P G G
Sbjct: 574 PPPGAG 579
Score = 51.2 bits (121), Expect = 3e-06
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 9/57 (15%)
Query: 34 PAFSEASRGVSMFVWRNVEGHSAAVFSWYS-IPFLTP--------PCSHTRPSNLPV 81
PA S ASRG+ MFVW NVE S AVF W+S +PFL P P +P++ PV
Sbjct: 10 PASSAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQPASHPV 66
>gi|169171742 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 161 bits (407), Expect = 2e-39
Identities = 90/143 (62%), Positives = 94/143 (65%), Gaps = 25/143 (17%)
Query: 475 DAALAAPPLLLPESHAGGQPQRSQDSQYPLRTWTVC-------GGSNGGQDG--YLLP-- 523
DAAL APPL LPESH P +Q ++ W C G +G LP
Sbjct: 522 DAALDAPPLPLPESHPCLTP--PHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQH 579
Query: 524 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 571
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
Query: 572 QGGACGLGGVHAPLLSPEGLDSE 594
QGGACGLGGVHAPLLSPEGLDSE
Sbjct: 640 QGGACGLGGVHAPLLSPEGLDSE 662
Score = 153 bits (387), Expect = 4e-37
Identities = 90/162 (55%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 69 PPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQSLSALRKEQDSSSEKDGRSPNKSD 128
P HT P PPT E + Q QSLSALRKEQDSSS+KDG SPNK D
Sbjct: 289 PGTPHTLGVVEPGKSPPPTMEEEPWAPQGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWD 348
Query: 129 KDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKY-NLAF 187
KDHIRWPMSG H+LQQAAPG G AHQGHPNQDN TVSQ+LS+RWYTLGPNE QKY + AF
Sbjct: 349 KDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDQAF 408
Query: 188 Q--ECNKGSWERSISETGTATAPGVSSELLSVAAQTLQSSDT 227
Q + + + G A PG S +V + S DT
Sbjct: 409 QVKVAHLQQGPKEVQLRGQAHKPGASR---TVQGLHMASEDT 447
>gi|169172340 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 161 bits (407), Expect = 2e-39
Identities = 90/143 (62%), Positives = 94/143 (65%), Gaps = 25/143 (17%)
Query: 475 DAALAAPPLLLPESHAGGQPQRSQDSQYPLRTWTVC-------GGSNGGQDG--YLLP-- 523
DAAL APPL LPESH P +Q ++ W C G +G LP
Sbjct: 522 DAALDAPPLPLPESHPCLTP--PHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQH 579
Query: 524 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 571
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
Query: 572 QGGACGLGGVHAPLLSPEGLDSE 594
QGGACGLGGVHAPLLSPEGLDSE
Sbjct: 640 QGGACGLGGVHAPLLSPEGLDSE 662
Score = 155 bits (393), Expect = 8e-38
Identities = 92/164 (56%), Positives = 103/164 (62%), Gaps = 10/164 (6%)
Query: 69 PPCSHTRPSNLPVTQWPPTRENN--LPSWQPLLMSVHQSLSALRKEQDSSSEKDGRSPNK 126
P HT P PPT E P P + QSLSALRKEQDSSS+KDG SPNK
Sbjct: 289 PGTPHTLGVVEPGKSPPPTMEEEPWAPKGSPCWTA--QSLSALRKEQDSSSKKDGHSPNK 346
Query: 127 SDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKY-NL 185
DKDHIRWPMSG H+LQQAAPG G AHQGHPNQDN TVSQ+LS+RWYTLGPNE QKY +L
Sbjct: 347 WDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDL 406
Query: 186 AFQ--ECNKGSWERSISETGTATAPGVSSELLSVAAQTLQSSDT 227
AFQ + + + G A PG S +V + S DT
Sbjct: 407 AFQVKVAHLQQGPKEVQLRGQAHKPGASR---TVQGLHMASEDT 447
>gi|169170016 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 159 bits (403), Expect = 5e-39
Identities = 89/143 (62%), Positives = 93/143 (65%), Gaps = 25/143 (17%)
Query: 475 DAALAAPPLLLPESHAGGQPQRSQDSQYPLRTWTVC-------GGSNGGQDG--YLLP-- 523
DAAL APPL LPESH P +Q ++ W C G +G LP
Sbjct: 522 DAALDAPPLPLPESHPCLTP--PHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQH 579
Query: 524 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 571
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
Query: 572 QGGACGLGGVHAPLLSPEGLDSE 594
QGGACGLGGVH PLLSPEGLDSE
Sbjct: 640 QGGACGLGGVHVPLLSPEGLDSE 662
Score = 155 bits (393), Expect = 8e-38
Identities = 92/164 (56%), Positives = 103/164 (62%), Gaps = 10/164 (6%)
Query: 69 PPCSHTRPSNLPVTQWPPTRENN--LPSWQPLLMSVHQSLSALRKEQDSSSEKDGRSPNK 126
P HT P PPT E P P + QSLSALRKEQDSSS+KDG SPNK
Sbjct: 289 PGTPHTLGVVEPGKSPPPTMEEEPWAPKGSPCWTA--QSLSALRKEQDSSSKKDGHSPNK 346
Query: 127 SDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKY-NL 185
DKDHIRWPMSG H+LQQAAPG G AHQGHPNQDN TVSQ+LS+RWYTLGPNE QKY +L
Sbjct: 347 WDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDL 406
Query: 186 AFQ--ECNKGSWERSISETGTATAPGVSSELLSVAAQTLQSSDT 227
AFQ + + + G A PG S +V + S DT
Sbjct: 407 AFQVKVAHLQQGPKEVQLRGQAHKPGASR---TVQGLHMASEDT 447
>gi|239508816 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 159 bits (403), Expect = 5e-39
Identities = 89/143 (62%), Positives = 93/143 (65%), Gaps = 25/143 (17%)
Query: 475 DAALAAPPLLLPESHAGGQPQRSQDSQYPLRTWTVC-------GGSNGGQDG--YLLP-- 523
DAAL APPL LPESH P +Q ++ W C G +G LP
Sbjct: 522 DAALDAPPLPLPESHPCLTP--PHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQH 579
Query: 524 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 571
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
Query: 572 QGGACGLGGVHAPLLSPEGLDSE 594
QGGACGLGGVH PLLSPEGLDSE
Sbjct: 640 QGGACGLGGVHVPLLSPEGLDSE 662
Score = 155 bits (393), Expect = 8e-38
Identities = 92/164 (56%), Positives = 103/164 (62%), Gaps = 10/164 (6%)
Query: 69 PPCSHTRPSNLPVTQWPPTRENN--LPSWQPLLMSVHQSLSALRKEQDSSSEKDGRSPNK 126
P HT P PPT E P P + QSLSALRKEQDSSS+KDG SPNK
Sbjct: 289 PGTPHTLGVVEPGKSPPPTMEEEPWAPKGSPCWTA--QSLSALRKEQDSSSKKDGHSPNK 346
Query: 127 SDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKY-NL 185
DKDHIRWPMSG H+LQQAAPG G AHQGHPNQDN TVSQ+LS+RWYTLGPNE QKY +L
Sbjct: 347 WDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDL 406
Query: 186 AFQ--ECNKGSWERSISETGTATAPGVSSELLSVAAQTLQSSDT 227
AFQ + + + G A PG S +V + S DT
Sbjct: 407 AFQVKVAHLQQGPKEVQLRGQAHKPGASR---TVQGLHMASEDT 447
>gi|14149805 hypothetical protein LOC84080 [Homo sapiens]
Length = 346
Score = 37.4 bits (85), Expect = 0.041
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 278 GTASYSGPKPSTQHGAPGHFAAPGEG---VYGHTLSSSYTYSDASSSTLAPTSFLLGPGA 334
G + SGP P P ++ P + G+ L SD + T AP +GPGA
Sbjct: 4 GPSRISGPIPPDPTLCPDNYRRPTSAQGRLEGNALKLDLLTSDRALDTTAPRGPCIGPGA 63
Query: 335 FKAQESGQRSRAGP-LRPQPLGMGAQGRLPRGNPTD 369
+ E GQR L+ + + +G L R +P D
Sbjct: 64 GEILERGQRGVGDVLLQLEGISLGPGASLKRKDPKD 99
>gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo
sapiens]
Length = 941
Score = 37.0 bits (84), Expect = 0.054
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 104 QSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRT 163
Q L A EQD +D SP + R PM+ L Q HP DNR
Sbjct: 56 QLLGADGLEQDVGETEDDESPEQ----RARRPMNAF--LLFCKRHRSLVRQEHPRLDNRG 109
Query: 164 VSQMLSERWYTLGPNEMQKY 183
+++L++ W L P E QKY
Sbjct: 110 ATKILADWWAVLDPKEKQKY 129
>gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo
sapiens]
Length = 911
Score = 37.0 bits (84), Expect = 0.054
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 104 QSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRT 163
Q L A EQD +D SP + R PM+ L Q HP DNR
Sbjct: 56 QLLGADGLEQDVGETEDDESPEQ----RARRPMNAF--LLFCKRHRSLVRQEHPRLDNRG 109
Query: 164 VSQMLSERWYTLGPNEMQKY 183
+++L++ W L P E QKY
Sbjct: 110 ATKILADWWAVLDPKEKQKY 129
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 36.2 bits (82), Expect = 0.091
Identities = 50/225 (22%), Positives = 80/225 (35%), Gaps = 38/225 (16%)
Query: 276 VSGTASYSGPKPSTQHGAPGHFAAPGEGVYGHTLSSSYTYSDASSSTLAPTSFLLGPGAF 335
+ +A+ +G PS G+ AAPG G S++++ S ++LAPT
Sbjct: 489 LKSSATVTGEPPSYSSGSDSSKAAPGPG------PSTFSFVPPSKASLAPT--------- 533
Query: 336 KAQESGQRSRAGPLRPQ--PLGMGAQGRLPRGNPTDMDPTLEDPTAPKCKTRRCS-SCSP 392
A P+ P G+ G PTLE P + S
Sbjct: 534 --------PAASPVAPSAASFSFGSSG---------FKPTLESTPVPSVSAPNIAMKPSF 576
Query: 393 KPNTPKCAMCDGDSFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHYAHIF--PSK 450
P+T + + F A T P S+S A + +H + PS
Sbjct: 577 PPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSS 636
Query: 451 VCSAPALTPSPVGVLTAPHLAQTLDAALAAPPLLLPESHAGGQPQ 495
V ++ PSP G +A + + + + P + P + G PQ
Sbjct: 637 VPLKSSVLPSPSG-RSAQGSSSPVPSMVQKSPRITPPAAKPGSPQ 680
>gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 35.4 bits (80), Expect = 0.16
Identities = 33/141 (23%), Positives = 51/141 (36%), Gaps = 15/141 (10%)
Query: 250 AFSHSGVHSLDGREIDRQALR--ELTQVVSGTASYSGPKPSTQHGAPGHFAA-------- 299
A + ++G+ +D +A++ + T+ + P P G P F A
Sbjct: 60 ADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGT 119
Query: 300 ---PGEGVYGHTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQRSRAGPLRPQPLGM 356
P G GH Y+ + SS+ P GP S +RS L GM
Sbjct: 120 RGPPSRG--GHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPSPKRSAPSGLVRSSSGM 177
Query: 357 GAQGRLPRGNPTDMDPTLEDP 377
G + L RG + P +P
Sbjct: 178 GGRAPLSRGRDSYGGPPRREP 198
>gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 35.4 bits (80), Expect = 0.16
Identities = 33/141 (23%), Positives = 51/141 (36%), Gaps = 15/141 (10%)
Query: 250 AFSHSGVHSLDGREIDRQALR--ELTQVVSGTASYSGPKPSTQHGAPGHFAA-------- 299
A + ++G+ +D +A++ + T+ + P P G P F A
Sbjct: 60 ADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGT 119
Query: 300 ---PGEGVYGHTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQRSRAGPLRPQPLGM 356
P G GH Y+ + SS+ P GP S +RS L GM
Sbjct: 120 RGPPSRG--GHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPSPKRSAPSGLVRSSSGM 177
Query: 357 GAQGRLPRGNPTDMDPTLEDP 377
G + L RG + P +P
Sbjct: 178 GGRAPLSRGRDSYGGPPRREP 198
>gi|223633935 hypothetical protein LOC254427 [Homo sapiens]
Length = 435
Score = 34.7 bits (78), Expect = 0.27
Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 8/97 (8%)
Query: 69 PPCSHT--RPSNLPVTQWPPTRENNLPS----WQPLLMSVHQSLSALRKEQDSSSEKDGR 122
PP T P LP T PP RE PS LL SV L +K + + +
Sbjct: 152 PPAPETLLAPPPLPSTPDPPRRELRAPSPPVEHPRLLRSVPTPLVMAQKISERMAGNEAL 211
Query: 123 SPNKSDKDHI--RWPMSGAHDLQQAAPGPGGAHQGHP 157
SP ++ W A + PGPG +H P
Sbjct: 212 SPTSPFREGRPGEWRTPAARGPRSGDPGPGPSHPAQP 248
>gi|6912414 hairy/enhancer-of-split related with YRPW motif 2 [Homo
sapiens]
Length = 337
Score = 34.3 bits (77), Expect = 0.35
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 428 ALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVGVLTAPHLAQTLDAALAAPPLLLPE 487
+LS+++HA AA AH FP A + P P+ A + AA A P L
Sbjct: 259 SLSATVHAAAAAATAAAHSFPLSFAGAFPMLP--------PNAAAAVAAATAISPPLSVS 310
Query: 488 SHAGGQPQRSQDSQYPLRTW 507
+ + Q S + P R W
Sbjct: 311 ATSSPQQTSSGTNNKPYRPW 330
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 33.9 bits (76), Expect = 0.45
Identities = 41/169 (24%), Positives = 62/169 (36%), Gaps = 4/169 (2%)
Query: 200 SETGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSL 259
SE T + V S+ A SS T + T+ S+G+ + S + V S
Sbjct: 408 SEASTTSTIPVDSKTFVTTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVASS 467
Query: 260 DGREIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAPGEGVYGHTLSSSYTYSDAS 319
+ + + TQV + T + S P + + P + P EG T S T AS
Sbjct: 468 EASNLSTTPVDSKTQVTTSTEASSSPPTAEVNSMP--TSTPSEGSTPLTSMSVSTMPVAS 525
Query: 320 S--STLAPTSFLLGPGAFKAQESGQRSRAGPLRPQPLGMGAQGRLPRGN 366
S STL+ T + E+ S P ++G P N
Sbjct: 526 SEASTLSTTPVDTSTPVTTSSEASSSSTTPEGTSIPTSTPSEGSTPLTN 574
Score = 31.2 bits (69), Expect = 2.9
Identities = 62/289 (21%), Positives = 105/289 (36%), Gaps = 24/289 (8%)
Query: 200 SETGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSL 259
SE T + V S + SS T + T+ +++G+ + + + V S
Sbjct: 644 SEASTLSTTPVDSNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLTSMPVNTTLVASS 703
Query: 260 DGREIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAPGEGVYGHTLS--SSYTYSD 317
+ + + T V + T + S P +T GA + P EG T S +
Sbjct: 704 EASTLSTTPVDTSTPVTTSTEASSSP--TTADGASMPTSTPSEGSTPLTSMPVSKTLLTS 761
Query: 318 ASSSTLAPTSFLLGPGAFKAQESGQRSRAGPLRPQPLGMGAQGR-LPRGNPTDMDPTLED 376
+ +STL+ T + E+ P+ ++G L P + P +
Sbjct: 762 SEASTLSTTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSITP-VTS 820
Query: 377 PTAPKCKTRRCSSCSPKPNTPKCAM----CDGDSFPFACTGGEAEDRLREPETEKALSSS 432
P A T S SP + + + +G S P T E R P T +S++
Sbjct: 821 PEASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMP-TSTYSEG----RTPLTSMPVSTT 875
Query: 433 LHATAALQAHYAHIFPSKVCSAPALTPSPVGVLTAPHLAQTLDAALAAP 481
L AT+A+ S + + P T +PV T + T + P
Sbjct: 876 LVATSAI---------STLSTTPVDTSTPVTNSTEARSSPTTSEGTSMP 915
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 33.5 bits (75), Expect = 0.59
Identities = 50/207 (24%), Positives = 66/207 (31%), Gaps = 10/207 (4%)
Query: 284 GPKPSTQHGAPGHFAAPGEGVYGHTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQR 343
GP + GAP AA G + S + + P+ G A G
Sbjct: 976 GPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSP--KGSPAATPFPKGAS 1033
Query: 344 SRAGPLRPQPLGMGAQGRLPRGNPTDMDPTLED----PTAPKCKTRRCSSCSPKPNT--- 396
+ P P G A LP+G PT TL P P K + P+
Sbjct: 1034 TPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGG 1093
Query: 397 PKCAMCDGDSFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHYAHIFPSKVCSAPA 456
P G P A T + L P + A ++ + + A P + PA
Sbjct: 1094 PATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPA 1153
Query: 457 LT-PSPVGVLTAPHLAQTLDAALAAPP 482
T PSP G L P A PP
Sbjct: 1154 ATPPSPKGGLATPPPKGAPTTPAATPP 1180
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 33.1 bits (74), Expect = 0.77
Identities = 74/313 (23%), Positives = 114/313 (36%), Gaps = 44/313 (14%)
Query: 70 PCSHTRPSNLPVTQWPPTREN---NLPSW--QPLLMSVHQSLSALRKEQDSSSEKDGRSP 124
P S + P+ LP T PP + +LP QPLL + R ++ +G
Sbjct: 814 PASSSLPAFLPTTHSPPGPQQPPASLPGLTAQPLLSPKEATSDPSRTPEEEPLNLEGLVA 873
Query: 125 NKSDKDHIR--WPMSGAHDLQQAAPGPGGAHQGHPNQDN------RTVSQMLS-ERWYTL 175
++ R P L++ A G P + R+ Q +S E T+
Sbjct: 874 HRVAGVQAREKQPAEPPAPLRRRAASDGQYENQSPEATSPRSPGVRSPVQCVSPELALTI 933
Query: 176 GPN--------EMQKYNLAFQECNKGSWERSISETGTATAPGVSSELLSVAAQTLQSSDT 227
N + Y AF+E +G+ S +G + PG++ LS A L+ +
Sbjct: 934 ALNPGGRPKEPHLHSYKEAFEEM-EGTSPSSPPPSGVRSPPGLAKTPLS--ALGLKPHNP 990
Query: 228 KEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKP 287
+ LL H G Q G ++ + E V A + P
Sbjct: 991 ADILL------HPTGVTRRRIQPEEDEG-------KVVVRLSEEPRSYVESVARTAVAGP 1037
Query: 288 STQHGAPGHFAAPGEGVYGHTL---SSSYTYSDASSSTLAPTSFLLGPGAFKAQE--SGQ 342
Q P F+AP YGH + + + S S S L+ +S +L + SG+
Sbjct: 1038 RAQDSEPKSFSAPATQAYGHEIPLRNGTLGGSFVSPSPLSTSSPILSADSTSVGSFPSGE 1097
Query: 343 RSRAGPLRP-QPL 354
S GP P QPL
Sbjct: 1098 SSDQGPRTPTQPL 1110
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 32.7 bits (73), Expect = 1.0
Identities = 38/139 (27%), Positives = 45/139 (32%), Gaps = 31/139 (22%)
Query: 309 LSSSYTYSDASSSTLAPTSFLLG---PGAFKAQESGQRSRAGPLRPQPLGMGAQGRLPRG 365
L S T D+ S P +F G P E G G RP R+ R
Sbjct: 1030 LKSPETRRDSERSHSPPKAFHAGKLFPFGGTRAEPGSNGAGGQARPDGTPSSGSSRVQRS 1089
Query: 366 NPTD--MDPTLEDPT--------------APKCKTRRCSSCSPKPNTP---------KCA 400
P D + LE P AP +TRR S +P P P C
Sbjct: 1090 GPVDEALAEELEAPRPEEEGSGTALAPVGAPALRTRRSRSPAPPPPMPLPRPPTPPAGCW 1149
Query: 401 MCDGDSFPFACTGGEAEDR 419
DG P+ C G A R
Sbjct: 1150 QWDG---PWGCGGEGAAPR 1165
>gi|4885455 SH2B adaptor protein 3 [Homo sapiens]
Length = 575
Score = 32.7 bits (73), Expect = 1.0
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
Query: 119 KDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPN 178
+DGR+P + +D R P + A PGPG A G P R+ ++ R GP
Sbjct: 80 RDGRAPGRDYRDTGRGPPAKAE--ASPEPGPGPAAPGLPKA--RSSEELAPPR--PPGPC 133
Query: 179 EMQKYNLAFQECNKGSWERSISETGTATAPGVSSELLSVAAQ 220
Q + + + + + TA APG E A+
Sbjct: 134 SFQHFRRSLRHIFRRRSAGELPAAHTAAAPGTPGEAAETPAR 175
>gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
Length = 1834
Score = 32.3 bits (72), Expect = 1.3
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 12/89 (13%)
Query: 71 CSHTRP-SNLPVTQWPPTRENNLPSWQPLLMSVHQSLSALRKEQDSSSEKDGRSPNKSDK 129
C H P S +P+ W NL PL S S R+ +++ +D RSP D
Sbjct: 1427 CWHMEPLSPIPIDHW------NLERTGPLSTS-----SPSRRMNEAADSRDCRSPGLLDT 1475
Query: 130 DHIRWPMSGAHDLQQAAPGPGGAHQGHPN 158
IR + LQ+ + G G P+
Sbjct: 1476 TPIRGSCTTQRKLQEKSSGAGSLGNSRPS 1504
>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
Length = 1334
Score = 32.3 bits (72), Expect = 1.3
Identities = 66/275 (24%), Positives = 96/275 (34%), Gaps = 40/275 (14%)
Query: 347 GPLRPQPLGMGAQGRLP---RGNPTDMDPTLEDPTAPKCKTRRC----SSCSPKPNTPKC 399
GPL P P +LP +P+ P L P P+ C S SP P +
Sbjct: 446 GPLLPSPARGLKFLKLPPTSEKSPSPGGPQLS-PQLPRNSRIPCRNSGSDGSPSPLLARR 504
Query: 400 AMCDGD----------SFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHYAHIFPS 449
+ G+ + P C +LR P++ ALS++L + Y +I
Sbjct: 505 GLGGGELSPEGAQGLPTSPSPCYTTPDSTQLRPPQS--ALSTTLSPGPVVSPCYENILDL 562
Query: 450 KVCS----APALTPSPVGVLTAPHLA-------QTLDAALAAPPLLLPESHAGGQPQR-- 496
+ +P PSP+ V T P L + L + P LPES+ G PQ
Sbjct: 563 SRSTFRGPSPEPPPSPLQVPTYPQLTLEVPQAPEVLRSPGVPPSPCLPESYPYGSPQEKS 622
Query: 497 ----SQDSQYPLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHF 552
+S +P R Q P PG + L A + + G A
Sbjct: 623 LDKAGSESPHPGRRTPGNSSKKPSQGSGRRPGDPGSTPLRDRL-AALGKLKTGPEGALGS 681
Query: 553 SENSSCWGYKMECEEGLGPQGGACG--LGGVHAPL 585
+N E G G G + G + +H PL
Sbjct: 682 EKNGVPARPGTEKTRGPGKSGESAGDMVPSIHRPL 716
>gi|21361411 HMG-box transcription factor 1 [Homo sapiens]
Length = 514
Score = 32.3 bits (72), Expect = 1.3
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 154 QGHPNQDNRTVSQMLSERWYTLGPNEMQKYNLAF-------QECNKGSWERSISETGT 204
Q +P +DNR +S +L +RW + E + Y L + N W+R + +G+
Sbjct: 454 QMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDCWKRKRTNSGS 511
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,398,078
Number of Sequences: 37866
Number of extensions: 1685137
Number of successful extensions: 4851
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 4694
Number of HSP's gapped (non-prelim): 208
length of query: 616
length of database: 18,247,518
effective HSP length: 108
effective length of query: 508
effective length of database: 14,157,990
effective search space: 7192258920
effective search space used: 7192258920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.