LOC648262 19273

Name: LOC648262	Sequence: fasta or formatted (441aa)		NCBI GI: 239747616
Description: PREDICTED: similar to hCG1996386		Referenced in: SOX Family
Other entries for this name: alt mRNA [441aa] PREDICTED: similar to hCG1996386 alt prot [811aa] PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 34 2 C cysteine 2.3 10 1 D aspartate 4.1 18 1 E glutamate 4.8 21 3 F phenylalanine 2.3 10 1 G glycine 7.3 32 2 H histidine 3.9 17 1 I isoleucine 1.8 8 1 K lysine 3.9 17 1 L leucine 9.8 43 3 M methionine 3.4 15 2 N asparagine 2.5 11 2 P proline 10.4 46 2 Q glutamine 5.4 24 2 R arginine 6.8 30 2 S serine 11.6 51 3 T threonine 5.0 22 2 V valine 3.4 15 1 W tryptophan 2.3 10 2 Y tyrosine 1.6 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1996386 LOC648262 1.000 PREDICTED: similar to hCG1996386 LOC648262 0.600 PREDICTED: hypothetical protein LOC100288667 0.540 PREDICTED: hypothetical protein XP_002344293 LOC100130600 0.534 PREDICTED: similar to hCG2014367 LOC100130600 0.534 PREDICTED: hypothetical protein LOC100130600 LOC100130600 0.534 PREDICTED: similar to hCG2014367 LOC100130600 0.531 PREDICTED: similar to hCG2014367 LOC100289067 0.352 PREDICTED: hypothetical protein XP_002342619 LOC442676 0.261 PREDICTED: hypothetical protein LOC442676 LOC442676 0.261 PREDICTED: hypothetical protein LOC442676 LOC442676 0.261 PREDICTED: hypothetical protein LOC442676 LOC442676 0.259 PREDICTED: hypothetical protein LOC442676 CIC 0.106 capicua homolog BBX 0.018 HMG-BOX transcription factor BBX isoform 1 BBX 0.018 HMG-BOX transcription factor BBX isoform 2 KIAA1191 0.009 hypothetical protein LOC57179 isoform a KIAA1191 0.009 hypothetical protein LOC57179 isoform b KIAA1191 0.009 hypothetical protein LOC57179 isoform a SPRY1 0.009 sprouty homolog 1, antagonist of FGF signaling [Homo... SPRY1 0.009 sprouty homolog 1, antagonist of FGF signaling [Homo... MLL3 0.009 myeloid/lymphoid or mixed-lineage leukemia 3 SOX13 0.009 SRY-box 13 KDM1 0.009 amine oxidase (flavin containing) domain 2 isoform a... KDM1 0.009 amine oxidase (flavin containing) domain 2 isoform b... SALL2 0.009 sal-like 2 TBC1D12 0.009 TBC1 domain family, member 12 DACH2 0.009 dachshund 2 isoform c DACH2 0.009 dachshund 2 isoform b DACH2 0.009 dachshund 2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.