Guide to the Human Genome
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Name: PANX2 Sequence: fasta or formatted (643aa) NCBI GI: 237757297
Description:

pannexin 2 isoform 2

Referenced in:

Gap Junctions and Tight Junctions

Other entries for this name:
alt prot [677aa] pannexin 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         74           2
 C cysteine            1.6         10           1
 D aspartate           4.2         27           2
 E glutamate           5.9         38           2
 F phenylalanine       3.6         23           1
 G glycine             5.3         34           4
 H histidine           2.8         18           2
 I isoleucine          5.3         34           2
 K lysine              5.9         38           2
 L leucine            12.3         79           3
 M methionine          1.2          8           1
 N asparagine          3.6         23           1
 P proline             9.5         61           3
 Q glutamine           3.1         20           1
 R arginine            5.9         38           2
 S serine              5.8         37           3
 T threonine           4.7         30           1
 V valine              4.7         30           2
 W tryptophan          0.8          5           1
 Y tyrosine            2.5         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pannexin 2 isoform 2 
PANX2                 0.983   pannexin 2 isoform 1 
PANX3                 0.094   pannexin 3 
PANX1                 0.080   pannexin 1 
TAF4                  0.023   TBP-associated factor 4 
PTPN23                0.022   protein tyrosine phosphatase, non-receptor type 23 [...
PCLO                  0.021   piccolo isoform 2 
PCLO                  0.021   piccolo isoform 1 
WIPF3                 0.019   WAS/WASL interacting protein family, member 3 [Homo...
RICH2                 0.019   Rho GTPase-activating protein RICH2 
NACA                  0.019   nascent polypeptide-associated complex alpha subuni...
REPS2                 0.017   RALBP1 associated Eps domain containing 2 isoform 2...
REPS2                 0.017   RALBP1 associated Eps domain containing 2 isoform 1...
CASKIN1               0.017   CASK interacting protein 1 
NHSL1                 0.016   NHS-like 1 
OTOG                  0.016   PREDICTED: otogelin isoform 2 
OTOG                  0.016   PREDICTED: otogelin isoform 1 
FLJ22184              0.016   PREDICTED: hypothetical protein LOC80164 
PLXNB1                0.016   plexin B1 
PLXNB1                0.016   plexin B1 
CSTF2T                0.015   cleavage stimulation factor, 3' pre-RNA, subunit 2, ...
SF3A2                 0.015   splicing factor 3a, subunit 2 
OTOG                  0.015   PREDICTED: otogelin isoform 1 
OTOG                  0.015   PREDICTED: otogelin isoform 2 
OTOG                  0.015   PREDICTED: otogelin isoform 2 
OTOG                  0.015   PREDICTED: otogelin isoform 1 
FLJ22184              0.014   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.014   PREDICTED: hypothetical protein FLJ22184 
UNCX                  0.014   UNC homeobox 
KIAA1522              0.014   hypothetical protein LOC57648 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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