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Search of human proteins with 23397518
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23397518 hypothetical protein LOC169693 [Homo sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23397518 hypothetical protein LOC169693 [Homo sapiens] 348 1e-96
gi|222537714 taxilin beta [Homo sapiens] 30 1.3
gi|46309463 vitamin K epoxide reductase complex, subunit 1-like ... 29 1.7
gi|66346689 dickkopf homolog 3 precursor [Homo sapiens] 29 2.2
gi|40548393 dickkopf homolog 3 precursor [Homo sapiens] 29 2.2
gi|40548389 dickkopf homolog 3 precursor [Homo sapiens] 29 2.2
gi|90819229 cutaneous T-cell lymphoma-associated antigen 1 isofo... 29 2.2
gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens] 28 2.9
gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens] 28 2.9
gi|45504376 synaptotagmin VI [Homo sapiens] 28 2.9
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 28 3.8
gi|215272390 solute carrier family 18 (vesicular monoamine), mem... 28 3.8
gi|208879454 solute carrier family 18 (vesicular monoamine), mem... 28 3.8
gi|4506987 solute carrier family 18 (vesicular monoamine), membe... 28 3.8
gi|24431939 DnaJ (Hsp40) homolog, subfamily C, member 22 [Homo s... 28 3.8
gi|15147240 brother of CDO [Homo sapiens] 28 3.8
gi|122937388 MAX gene associated [Homo sapiens] 28 3.8
gi|39777606 Rho guanine nucleotide exchange factor 1 isoform 1 [... 28 5.0
gi|39777604 Rho guanine nucleotide exchange factor 1 isoform 3 [... 28 5.0
gi|15011972 Rho guanine nucleotide exchange factor 1 isoform 2 [... 28 5.0
gi|148529023 hypothetical protein LOC23172 [Homo sapiens] 27 6.5
gi|23199971 T-cell activation Rho GTPase-activating protein isof... 27 6.5
gi|21314774 T-cell activation Rho GTPase-activating protein isof... 27 6.5
gi|27436974 potassium voltage-gated channel, Shab-related subfam... 27 6.5
gi|89242141 colon cancer-associated protein Mic1 [Homo sapiens] 27 6.5
gi|193290160 CTAGE family, member 4 [Homo sapiens] 27 8.5
gi|224586773 hypothetical protein LOC643854 [Homo sapiens] 27 8.5
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H... 27 8.5
gi|4557265 beta-1-adrenergic receptor [Homo sapiens] 27 8.5
gi|239754950 PREDICTED: hypothetical protein XP_002346164 [Homo ... 27 8.5
>gi|23397518 hypothetical protein LOC169693 [Homo sapiens]
Length = 170
Score = 348 bits (893), Expect = 1e-96
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MQNRTGLILCALALLMGFLMVCLGAFFISWGSIFDCQGSLIAAYLLLPLGFVILLSGIFW 60
MQNRTGLILCALALLMGFLMVCLGAFFISWGSIFDCQGSLIAAYLLLPLGFVILLSGIFW
Sbjct: 1 MQNRTGLILCALALLMGFLMVCLGAFFISWGSIFDCQGSLIAAYLLLPLGFVILLSGIFW 60
Query: 61 SNYRQVTESKGVLRHMLRQHLAHGALPVATVDRPDFYPPAYEESLEVEKQSCPAEREASG 120
SNYRQVTESKGVLRHMLRQHLAHGALPVATVDRPDFYPPAYEESLEVEKQSCPAEREASG
Sbjct: 61 SNYRQVTESKGVLRHMLRQHLAHGALPVATVDRPDFYPPAYEESLEVEKQSCPAEREASG 120
Query: 121 IPPPLYTETGLEFQDGNDSHPEAPPSYRESIAGLVVTAISEDAQRRGQEC 170
IPPPLYTETGLEFQDGNDSHPEAPPSYRESIAGLVVTAISEDAQRRGQEC
Sbjct: 121 IPPPLYTETGLEFQDGNDSHPEAPPSYRESIAGLVVTAISEDAQRRGQEC 170
>gi|222537714 taxilin beta [Homo sapiens]
Length = 684
Score = 29.6 bits (65), Expect = 1.3
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 101 YEESLEVEKQSCPAEREASGIPPPLYTETGLEFQDGNDSHPEAPPSYRESIAGLVVTAIS 160
+ E L E+QS P ++S +P + GLE +DG DS P +E+ V IS
Sbjct: 5 HSEQLSAERQSTPPG-DSSSLP----SHNGLEKEDGQDSPTPVQPPEKEA---SVHPDIS 56
Query: 161 EDAQRR 166
E+ R+
Sbjct: 57 EELNRQ 62
>gi|46309463 vitamin K epoxide reductase complex, subunit 1-like 1
[Homo sapiens]
Length = 176
Score = 29.3 bits (64), Expect = 1.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 6 GLILCALALLMGFLMVCLGAFFISWGSIFDCQGSLIAAYLL 46
GLI L LL+G + A + SI GSL AY+L
Sbjct: 91 GLIFYILQLLLGMTASAVAALILMTSSIMSVVGSLYLAYIL 131
>gi|66346689 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 28.9 bits (63), Expect = 2.2
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 103 ESLEVEKQSCPAEREAS--GIPPPLYTETGLEFQDGNDS---HPEAPPSYRESIAGL--- 154
E +E E+ + A E + +PP + ET + + GN++ H E +
Sbjct: 70 EEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITNNQTGQMVFS 129
Query: 155 --VVTAISEDAQRRGQEC 170
V+T++ ++ RR EC
Sbjct: 130 ETVITSVGDEEGRRSHEC 147
>gi|40548393 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 28.9 bits (63), Expect = 2.2
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 103 ESLEVEKQSCPAEREAS--GIPPPLYTETGLEFQDGNDS---HPEAPPSYRESIAGL--- 154
E +E E+ + A E + +PP + ET + + GN++ H E +
Sbjct: 70 EEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITNNQTGQMVFS 129
Query: 155 --VVTAISEDAQRRGQEC 170
V+T++ ++ RR EC
Sbjct: 130 ETVITSVGDEEGRRSHEC 147
>gi|40548389 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 28.9 bits (63), Expect = 2.2
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 103 ESLEVEKQSCPAEREAS--GIPPPLYTETGLEFQDGNDS---HPEAPPSYRESIAGL--- 154
E +E E+ + A E + +PP + ET + + GN++ H E +
Sbjct: 70 EEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITNNQTGQMVFS 129
Query: 155 --VVTAISEDAQRRGQEC 170
V+T++ ++ RR EC
Sbjct: 130 ETVITSVGDEEGRRSHEC 147
>gi|90819229 cutaneous T-cell lymphoma-associated antigen 1 isoform
1 [Homo sapiens]
Length = 745
Score = 28.9 bits (63), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 104 SLEVEKQSCPAEREASG---IPPPLYTETGLEF 133
+L+V S PAE EA+G +PPPL GL F
Sbjct: 641 NLKVPDSSLPAENEATGPGFVPPPLAPIRGLLF 673
>gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens]
Length = 572
Score = 28.5 bits (62), Expect = 2.9
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 15/67 (22%)
Query: 88 VATVDRPDFYPPAYEESLEVEKQSCPAEREASGIPPPLYTETGLEFQDGNDSHPEAPPSY 147
V V P +YPP Y S E + QS P PLY + PPSY
Sbjct: 146 VPPVPPPPYYPPEYTCSSETDAQSITYNGSMDS-PVPLYP-------------TDCPPSY 191
Query: 148 RESIAGL 154
E++ GL
Sbjct: 192 -EAVMGL 197
>gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens]
Length = 668
Score = 28.5 bits (62), Expect = 2.9
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 15/67 (22%)
Query: 88 VATVDRPDFYPPAYEESLEVEKQSCPAEREASGIPPPLYTETGLEFQDGNDSHPEAPPSY 147
V V P +YPP Y S E + QS P PLY + PPSY
Sbjct: 242 VPPVPPPPYYPPEYTCSSETDAQSITYNGSMDS-PVPLYP-------------TDCPPSY 287
Query: 148 RESIAGL 154
E++ GL
Sbjct: 288 -EAVMGL 293
>gi|45504376 synaptotagmin VI [Homo sapiens]
Length = 425
Score = 28.5 bits (62), Expect = 2.9
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 16/84 (19%)
Query: 64 RQVTESKGVLRH-MLRQHLAHGALPVATVDRPDFYPPAYEESLEVEKQSCPAEREASGIP 122
RQ TE RH ++HL + V++VD + PPA E+ + + I
Sbjct: 76 RQTTEPASSTRHTSFKRHLPR-QMHVSSVDYGNELPPAAEQPTSIGR-----------IK 123
Query: 123 PPLYTETGLEFQDGNDSHPEAPPS 146
P LY + + DG D+ EA S
Sbjct: 124 PELYKQKSV---DGEDAKSEATKS 144
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 28.1 bits (61), Expect = 3.8
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 83 HGALPVATVDRPDFYPPAYEESLEVEKQS-CPAEREASGIPPP 124
HG P RP F PP++ L ++ P R +PPP
Sbjct: 208 HGFFPPRLFARPGFLPPSHRGLLTPRRRGFLPPPRHRGFLPPP 250
>gi|215272390 solute carrier family 18 (vesicular monoamine), member
1 isoform b [Homo sapiens]
Length = 493
Score = 28.1 bits (61), Expect = 3.8
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 98 PPAYEESLEVEKQSCPAEREASGIPPPLYTETGLEFQDGNDSHPEAPPSYRE 149
PPA EE L + Q CP E P EF G DS E P + E
Sbjct: 449 PPAKEEKLAILSQDCPMETRMYATQKPT-----KEFPLGEDSDEE--PDHEE 493
>gi|208879454 solute carrier family 18 (vesicular monoamine), member
1 isoform a [Homo sapiens]
Length = 525
Score = 28.1 bits (61), Expect = 3.8
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 98 PPAYEESLEVEKQSCPAEREASGIPPPLYTETGLEFQDGNDSHPEAPPSYRE 149
PPA EE L + Q CP E P EF G DS E P + E
Sbjct: 481 PPAKEEKLAILSQDCPMETRMYATQKPT-----KEFPLGEDSDEE--PDHEE 525
>gi|4506987 solute carrier family 18 (vesicular monoamine), member 1
isoform a [Homo sapiens]
Length = 525
Score = 28.1 bits (61), Expect = 3.8
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 98 PPAYEESLEVEKQSCPAEREASGIPPPLYTETGLEFQDGNDSHPEAPPSYRE 149
PPA EE L + Q CP E P EF G DS E P + E
Sbjct: 481 PPAKEEKLAILSQDCPMETRMYATQKPT-----KEFPLGEDSDEE--PDHEE 525
>gi|24431939 DnaJ (Hsp40) homolog, subfamily C, member 22 [Homo
sapiens]
Length = 341
Score = 28.1 bits (61), Expect = 3.8
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 9 LCALALLMGFLMVCLGAFFISWGSIFDCQGSLIAAYLLLPLGFVILLSG 57
LC A + ++ G+F ++W S F G L+ LLLP LL G
Sbjct: 201 LCNTAATLSYVAETFGSF-LNWFSFFPLLGRLMEFVLLLPYRIWRLLMG 248
>gi|15147240 brother of CDO [Homo sapiens]
Length = 1114
Score = 28.1 bits (61), Expect = 3.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 97 YPPAYEESLEVEKQSCPAEREASGIPPPLYT 127
YPP + + + QS E ASGIPPP T
Sbjct: 233 YPPEAQTIIVTKGQSLILECVASGIPPPRVT 263
>gi|122937388 MAX gene associated [Homo sapiens]
Length = 3114
Score = 28.1 bits (61), Expect = 3.8
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 113 PAEREASGIPPPLYTETGLEFQDGNDSHPEAPPSYRESIAGLVVTAISEDA 163
PAE E+ PP L+ +TGLE + D+ P + + GL V S DA
Sbjct: 3004 PAEPESVSSPPTLHMKTGLENSNSTDTLWRPMP--KLAPLGLKVANPSSDA 3052
>gi|39777606 Rho guanine nucleotide exchange factor 1 isoform 1
[Homo sapiens]
Length = 927
Score = 27.7 bits (60), Expect = 5.0
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 13/74 (17%)
Query: 90 TVDRPDFYPPAYEESLEVEKQSCPAEREASGIPPPLYTETGLEFQD------------GN 137
++D PD P A + LE+ S + PP T+ G E + G
Sbjct: 345 SLDSPDREPGA-DAPLELGDSSPQGPMSLESLAPPESTDEGAETESPEPGDEGEPGRSGL 403
Query: 138 DSHPEAPPSYRESI 151
+ PE PP +RE +
Sbjct: 404 ELEPEEPPGWRELV 417
>gi|39777604 Rho guanine nucleotide exchange factor 1 isoform 3
[Homo sapiens]
Length = 879
Score = 27.7 bits (60), Expect = 5.0
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 13/74 (17%)
Query: 90 TVDRPDFYPPAYEESLEVEKQSCPAEREASGIPPPLYTETGLEFQD------------GN 137
++D PD P A + LE+ S + PP T+ G E + G
Sbjct: 297 SLDSPDREPGA-DAPLELGDSSPQGPMSLESLAPPESTDEGAETESPEPGDEGEPGRSGL 355
Query: 138 DSHPEAPPSYRESI 151
+ PE PP +RE +
Sbjct: 356 ELEPEEPPGWRELV 369
>gi|15011972 Rho guanine nucleotide exchange factor 1 isoform 2
[Homo sapiens]
Length = 912
Score = 27.7 bits (60), Expect = 5.0
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 13/74 (17%)
Query: 90 TVDRPDFYPPAYEESLEVEKQSCPAEREASGIPPPLYTETGLEFQD------------GN 137
++D PD P A + LE+ S + PP T+ G E + G
Sbjct: 330 SLDSPDREPGA-DAPLELGDSSPQGPMSLESLAPPESTDEGAETESPEPGDEGEPGRSGL 388
Query: 138 DSHPEAPPSYRESI 151
+ PE PP +RE +
Sbjct: 389 ELEPEEPPGWRELV 402
>gi|148529023 hypothetical protein LOC23172 [Homo sapiens]
Length = 415
Score = 27.3 bits (59), Expect = 6.5
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 64 RQVTESKGVLRH--MLRQHLAHGALPVATVDRPDFYPPAYEESLEVEKQSCPAEREASGI 121
RQ+T+ K L+Q + +P ++D P F P E +S + EAS
Sbjct: 246 RQITQRKNEKEQERRLQQAVLSRQMPSESLD-PAFSPRMPSSGFAAEGRSTLGDAEASD- 303
Query: 122 PPPLYTETGLEFQDGNDSH 140
PPP Y++ Q+ SH
Sbjct: 304 PPPPYSDFHPNNQESTLSH 322
>gi|23199971 T-cell activation Rho GTPase-activating protein isoform
a [Homo sapiens]
Length = 553
Score = 27.3 bits (59), Expect = 6.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 133 FQDGNDSHPEAPPSYRESIAGLVVTAISEDAQRRG 167
FQ + P +PPSY E++ G ++ ++Q G
Sbjct: 404 FQGADWERPGSPPSYEEAMQGPAARLVASESQTVG 438
>gi|21314774 T-cell activation Rho GTPase-activating protein isoform
b [Homo sapiens]
Length = 731
Score = 27.3 bits (59), Expect = 6.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 133 FQDGNDSHPEAPPSYRESIAGLVVTAISEDAQRRG 167
FQ + P +PPSY E++ G ++ ++Q G
Sbjct: 582 FQGADWERPGSPPSYEEAMQGPAARLVASESQTVG 616
>gi|27436974 potassium voltage-gated channel, Shab-related
subfamily, member 2 [Homo sapiens]
Length = 911
Score = 27.3 bits (59), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 98 PPAYEESLEVEKQSCPAEREA 118
P AYEE +E+E+ CP E+ A
Sbjct: 567 PSAYEEEIEMEEVVCPQEQLA 587
>gi|89242141 colon cancer-associated protein Mic1 [Homo sapiens]
Length = 657
Score = 27.3 bits (59), Expect = 6.5
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 72 VLRHMLRQHLAHGALPVATV--DRPDFYPPAYEESLEVEKQSCPAERE 117
+L L+ H+ + P+A + FYPPA++ SL++ K+ A E
Sbjct: 517 MLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKRLSTANDE 564
>gi|193290160 CTAGE family, member 4 [Homo sapiens]
Length = 777
Score = 26.9 bits (58), Expect = 8.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 104 SLEVEKQSCPAEREASG---IPPPLYTETG 130
+L V S PAE EA+G IPPPL +G
Sbjct: 674 NLNVPDSSLPAENEATGPGLIPPPLAPISG 703
>gi|224586773 hypothetical protein LOC643854 [Homo sapiens]
Length = 777
Score = 26.9 bits (58), Expect = 8.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 104 SLEVEKQSCPAEREASG---IPPPLYTETG 130
+L V S PAE EA+G IPPPL +G
Sbjct: 674 NLNVPDSSLPAENEATGPGLIPPPLAPISG 703
>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
sapiens]
Length = 1560
Score = 26.9 bits (58), Expect = 8.5
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 102 EESLEVEK--QSCPAEREASGIPPPLYTETGLEFQDGNDSHPEAP 144
EE LE E + PA +G P + GLE +G S P AP
Sbjct: 1495 EEELEEETGGEGPPAPIPTTGSPSTQENQNGLEPAEGTTSGPSAP 1539
>gi|4557265 beta-1-adrenergic receptor [Homo sapiens]
Length = 477
Score = 26.9 bits (58), Expect = 8.5
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 1 MQNRTGLILCALA---LLMGFLMVCLGAFFISWG 31
+Q T L + +LA L+MG L+V GA + WG
Sbjct: 89 LQTLTNLFIMSLASADLVMGLLVVPFGATIVVWG 122
>gi|239754950 PREDICTED: hypothetical protein XP_002346164 [Homo
sapiens]
Length = 104
Score = 26.9 bits (58), Expect = 8.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 109 KQSCPAEREASGIPPPLYTETGLE 132
+ SCP RE + PPP + T L+
Sbjct: 56 RNSCPPHRERTARPPPRHARTRLQ 79
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,088,290
Number of Sequences: 37866
Number of extensions: 320269
Number of successful extensions: 1080
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1063
Number of HSP's gapped (non-prelim): 36
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.