Guide to the Human Genome
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Name: FLT1 Sequence: fasta or formatted (687aa) NCBI GI: 229892220
Description:

fms-related tyrosine kinase 1 isoform 2 precursor

Referenced in:

Receptor Tyrosine Kinases

Other entries for this name:
alt prot [1338aa] fms-related tyrosine kinase 1 isoform 1 precursor
alt prot [733aa] fms-related tyrosine kinase 1 isoform 3 precursor
alt prot [541aa] fms-related tyrosine kinase 1 isoform 4 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         34           2
 C cysteine            2.8         19           1
 D aspartate           3.6         25           1
 E glutamate           4.9         34           2
 F phenylalanine       2.9         20           1
 G glycine             4.9         34           1
 H histidine           2.8         19           1
 I isoleucine          7.7         53           2
 K lysine              7.9         54           3
 L leucine             8.3         57           3
 M methionine          2.2         15           1
 N asparagine          5.7         39           2
 P proline             3.8         26           1
 Q glutamine           3.2         22           2
 R arginine            5.4         37           3
 S serine              8.9         61           3
 T threonine           9.2         63           2
 V valine              6.1         42           2
 W tryptophan          1.2          8           1
 Y tyrosine            3.6         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fms-related tyrosine kinase 1 isoform 2 precursor [... 
FLT1                  0.952   fms-related tyrosine kinase 1 isoform 1 precursor [...
FLT1                  0.952   fms-related tyrosine kinase 1 isoform 3 precursor [...
FLT1                  0.752   fms-related tyrosine kinase 1 isoform 4 precursor [...
FLT4                  0.223   fms-related tyrosine kinase 4 isoform 1 precursor [...
FLT4                  0.223   fms-related tyrosine kinase 4 isoform 2 precursor [...
KDR                   0.222   kinase insert domain receptor precursor 
PDGFRA                0.090   platelet-derived growth factor receptor alpha precurs...
PDGFRB                0.061   platelet-derived growth factor receptor beta precurso...
KIT                   0.050   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncoge...
KIT                   0.050   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene...
PDGFRL                0.049   platelet-derived growth factor receptor-like protein ...
HMCN1                 0.045   hemicentin 1 
CNTN5                 0.043   contactin 5 isoform long 
CNTN5                 0.043   contactin 5 isoform short 
DSCAML1               0.037   Down syndrome cell adhesion molecule like 1 
HMCN2                 0.035   PREDICTED: hemicentin 2 
IGSF10                0.035   immunoglobulin superfamily, member 10 
HMCN2                 0.035   PREDICTED: hemicentin 2 
HMCN2                 0.035   PREDICTED: hemicentin 2 
NEO1                  0.035   neogenin homolog 1 
NCAM1                 0.034   neural cell adhesion molecule 1 isoform 2 
CNTN4                 0.033   contactin 4 isoform a precursor 
NCAM1                 0.032   neural cell adhesion molecule 1 isoform 1 
NCAM1                 0.032   neural cell adhesion molecule 1 isoform 3 
LOC100292387          0.031   PREDICTED: similar to hemicentin 2 
CSF1R                 0.029   colony stimulating factor 1 receptor precursor [Homo...
PXDNL                 0.029   peroxidasin homolog-like 
DSCAM                 0.029   Down syndrome cell adhesion molecule isoform CHD2-42...
ROBO1                 0.029   roundabout 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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