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Search of human proteins with 227497884
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|227497884 brain-enriched guanylate kinase-associated protein
[Homo sapiens]
(593 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|227497884 brain-enriched guanylate kinase-associated protein ... 1193 0.0
gi|13124765 brain-enriched guanylate kinase-associated protein [... 1193 0.0
gi|225690497 tight junction associated protein 1 isoform b [Homo... 172 6e-43
gi|225690495 tight junction associated protein 1 isoform b [Homo... 172 6e-43
gi|225690493 tight junction associated protein 1 isoform b [Homo... 172 6e-43
gi|225690491 tight junction associated protein 1 isoform b [Homo... 172 6e-43
gi|225690489 tight junction associated protein 1 isoform a [Homo... 166 6e-41
gi|225690487 tight junction associated protein 1 isoform a [Homo... 166 6e-41
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 50 4e-06
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 50 4e-06
gi|31982906 cingulin-like 1 [Homo sapiens] 46 8e-05
gi|62414289 vimentin [Homo sapiens] 44 3e-04
gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo sapi... 44 3e-04
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 44 5e-04
gi|46249351 homer 2 isoform 2 [Homo sapiens] 43 7e-04
gi|46249349 homer 2 isoform 1 [Homo sapiens] 43 7e-04
gi|110349797 homer 2 isoform 4 [Homo sapiens] 43 7e-04
gi|110349794 homer 2 isoform 3 [Homo sapiens] 43 7e-04
gi|109255239 centrosomal protein 63 isoform b [Homo sapiens] 43 0.001
gi|22095367 centrosomal protein 63 isoform a [Homo sapiens] 43 0.001
gi|109255236 centrosomal protein 63 isoform d [Homo sapiens] 43 0.001
gi|7705415 hook homolog 1 [Homo sapiens] 43 0.001
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 42 0.001
gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo sap... 42 0.002
gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo sap... 42 0.002
gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo sap... 42 0.002
gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens] 42 0.002
gi|42740897 CTAGE family, member 5 isoform 1 [Homo sapiens] 42 0.002
gi|42740901 CTAGE family, member 5 isoform 4 [Homo sapiens] 42 0.002
gi|42740905 CTAGE family, member 5 isoform 2 [Homo sapiens] 42 0.002
>gi|227497884 brain-enriched guanylate kinase-associated protein
[Homo sapiens]
Length = 593
Score = 1193 bits (3086), Expect = 0.0
Identities = 593/593 (100%), Positives = 593/593 (100%)
Query: 1 MEKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRI 60
MEKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRI
Sbjct: 1 MEKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRI 60
Query: 61 QSNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELY 120
QSNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELY
Sbjct: 61 QSNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELY 120
Query: 121 RKDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEKHGCSLPSPLCHPAYADSVPT 180
RKDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEKHGCSLPSPLCHPAYADSVPT
Sbjct: 121 RKDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEKHGCSLPSPLCHPAYADSVPT 180
Query: 181 CVIAKVLEKPDPASLSSRLSDASARDLAFCDGVEKPGPRPPYKGDIYCSDTALYCPEERR 240
CVIAKVLEKPDPASLSSRLSDASARDLAFCDGVEKPGPRPPYKGDIYCSDTALYCPEERR
Sbjct: 181 CVIAKVLEKPDPASLSSRLSDASARDLAFCDGVEKPGPRPPYKGDIYCSDTALYCPEERR 240
Query: 241 RDRRPSVDAPVTDVGFLRAQNSTDSAAEEEEEAEAAAFPAGFQHEAFPSYAGSLPTSSSY 300
RDRRPSVDAPVTDVGFLRAQNSTDSAAEEEEEAEAAAFPAGFQHEAFPSYAGSLPTSSSY
Sbjct: 241 RDRRPSVDAPVTDVGFLRAQNSTDSAAEEEEEAEAAAFPAGFQHEAFPSYAGSLPTSSSY 300
Query: 301 SSFSATSEEKEHAQASTLTASQQAIYLNSRDELFDRKPPATTYEGSPRFAKATAAVAAPL 360
SSFSATSEEKEHAQASTLTASQQAIYLNSRDELFDRKPPATTYEGSPRFAKATAAVAAPL
Sbjct: 301 SSFSATSEEKEHAQASTLTASQQAIYLNSRDELFDRKPPATTYEGSPRFAKATAAVAAPL 360
Query: 361 EAEVAPGFGRTMSPYPAETFRFPASPGPQQALMPPNLWSLRAKPGTARLPGEDMRGQWRP 420
EAEVAPGFGRTMSPYPAETFRFPASPGPQQALMPPNLWSLRAKPGTARLPGEDMRGQWRP
Sbjct: 361 EAEVAPGFGRTMSPYPAETFRFPASPGPQQALMPPNLWSLRAKPGTARLPGEDMRGQWRP 420
Query: 421 LSVEDIGAYSYPVSAAGRASPCSFSERYYGGAGGSPGKKADGRASPLYASYKADSFSEGD 480
LSVEDIGAYSYPVSAAGRASPCSFSERYYGGAGGSPGKKADGRASPLYASYKADSFSEGD
Sbjct: 421 LSVEDIGAYSYPVSAAGRASPCSFSERYYGGAGGSPGKKADGRASPLYASYKADSFSEGD 480
Query: 481 DLSQGHLAEPCFLRAGGDLSLSPGRSADPLPGYAPSEGGDGDRLGVQLCGTASSPEPEQG 540
DLSQGHLAEPCFLRAGGDLSLSPGRSADPLPGYAPSEGGDGDRLGVQLCGTASSPEPEQG
Sbjct: 481 DLSQGHLAEPCFLRAGGDLSLSPGRSADPLPGYAPSEGGDGDRLGVQLCGTASSPEPEQG 540
Query: 541 SRDSLEPSSMEASPEMHPAARLSPQQAFPRTGGSGLSRKDSLTKAQLYGTLLN 593
SRDSLEPSSMEASPEMHPAARLSPQQAFPRTGGSGLSRKDSLTKAQLYGTLLN
Sbjct: 541 SRDSLEPSSMEASPEMHPAARLSPQQAFPRTGGSGLSRKDSLTKAQLYGTLLN 593
>gi|13124765 brain-enriched guanylate kinase-associated protein
[Homo sapiens]
Length = 593
Score = 1193 bits (3086), Expect = 0.0
Identities = 593/593 (100%), Positives = 593/593 (100%)
Query: 1 MEKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRI 60
MEKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRI
Sbjct: 1 MEKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRI 60
Query: 61 QSNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELY 120
QSNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELY
Sbjct: 61 QSNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELY 120
Query: 121 RKDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEKHGCSLPSPLCHPAYADSVPT 180
RKDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEKHGCSLPSPLCHPAYADSVPT
Sbjct: 121 RKDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEKHGCSLPSPLCHPAYADSVPT 180
Query: 181 CVIAKVLEKPDPASLSSRLSDASARDLAFCDGVEKPGPRPPYKGDIYCSDTALYCPEERR 240
CVIAKVLEKPDPASLSSRLSDASARDLAFCDGVEKPGPRPPYKGDIYCSDTALYCPEERR
Sbjct: 181 CVIAKVLEKPDPASLSSRLSDASARDLAFCDGVEKPGPRPPYKGDIYCSDTALYCPEERR 240
Query: 241 RDRRPSVDAPVTDVGFLRAQNSTDSAAEEEEEAEAAAFPAGFQHEAFPSYAGSLPTSSSY 300
RDRRPSVDAPVTDVGFLRAQNSTDSAAEEEEEAEAAAFPAGFQHEAFPSYAGSLPTSSSY
Sbjct: 241 RDRRPSVDAPVTDVGFLRAQNSTDSAAEEEEEAEAAAFPAGFQHEAFPSYAGSLPTSSSY 300
Query: 301 SSFSATSEEKEHAQASTLTASQQAIYLNSRDELFDRKPPATTYEGSPRFAKATAAVAAPL 360
SSFSATSEEKEHAQASTLTASQQAIYLNSRDELFDRKPPATTYEGSPRFAKATAAVAAPL
Sbjct: 301 SSFSATSEEKEHAQASTLTASQQAIYLNSRDELFDRKPPATTYEGSPRFAKATAAVAAPL 360
Query: 361 EAEVAPGFGRTMSPYPAETFRFPASPGPQQALMPPNLWSLRAKPGTARLPGEDMRGQWRP 420
EAEVAPGFGRTMSPYPAETFRFPASPGPQQALMPPNLWSLRAKPGTARLPGEDMRGQWRP
Sbjct: 361 EAEVAPGFGRTMSPYPAETFRFPASPGPQQALMPPNLWSLRAKPGTARLPGEDMRGQWRP 420
Query: 421 LSVEDIGAYSYPVSAAGRASPCSFSERYYGGAGGSPGKKADGRASPLYASYKADSFSEGD 480
LSVEDIGAYSYPVSAAGRASPCSFSERYYGGAGGSPGKKADGRASPLYASYKADSFSEGD
Sbjct: 421 LSVEDIGAYSYPVSAAGRASPCSFSERYYGGAGGSPGKKADGRASPLYASYKADSFSEGD 480
Query: 481 DLSQGHLAEPCFLRAGGDLSLSPGRSADPLPGYAPSEGGDGDRLGVQLCGTASSPEPEQG 540
DLSQGHLAEPCFLRAGGDLSLSPGRSADPLPGYAPSEGGDGDRLGVQLCGTASSPEPEQG
Sbjct: 481 DLSQGHLAEPCFLRAGGDLSLSPGRSADPLPGYAPSEGGDGDRLGVQLCGTASSPEPEQG 540
Query: 541 SRDSLEPSSMEASPEMHPAARLSPQQAFPRTGGSGLSRKDSLTKAQLYGTLLN 593
SRDSLEPSSMEASPEMHPAARLSPQQAFPRTGGSGLSRKDSLTKAQLYGTLLN
Sbjct: 541 SRDSLEPSSMEASPEMHPAARLSPQQAFPRTGGSGLSRKDSLTKAQLYGTLLN 593
>gi|225690497 tight junction associated protein 1 isoform b [Homo
sapiens]
Length = 547
Score = 172 bits (437), Expect = 6e-43
Identities = 106/254 (41%), Positives = 151/254 (59%), Gaps = 17/254 (6%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQ 61
E++ LQE+ ELR+RL+ T + E LE E + + LE+EL +++EEL+K +K RR+Q
Sbjct: 40 ERMKLLQEENEELRRRLASATRRTEALERELEIGQDCLELELGQSREELDKFKDKFRRLQ 99
Query: 62 SNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELYR 121
++Y A QR NQELEDKL+ + + E +++ L EIV L + LL+AK TI+KL E NE YR
Sbjct: 100 NSYTASQRTNQELEDKLHTLIKKAEMDRKTLDWEIVELTNKLLDAKNTINKLEELNERYR 159
Query: 122 KDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEK-HGCSLPSPLCHPAYADSVPT 180
DCNLA QLL+C++++ R HK ++LP + Q+ V H+ + P P A VPT
Sbjct: 160 LDCNLAVQLLKCNKSHFRNHKFADLPCELQDMVRKHLHSGQEAASPGPAPSLAPGAVVPT 219
Query: 181 CVIAKVLEKPDPASLSSRLSDASARDLA--------FCDGV-------EKPG-PRPPYKG 224
VIA+VLEKP+ L+S S ++ R LA +GV PG P P G
Sbjct: 220 SVIARVLEKPESLLLNSAQSGSAGRPLAEDVFVHVDMSEGVPGDPASPPAPGSPTPQPNG 279
Query: 225 DIYCSDTALYCPEE 238
+ + TA PEE
Sbjct: 280 ECHSLGTARGSPEE 293
>gi|225690495 tight junction associated protein 1 isoform b [Homo
sapiens]
Length = 547
Score = 172 bits (437), Expect = 6e-43
Identities = 106/254 (41%), Positives = 151/254 (59%), Gaps = 17/254 (6%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQ 61
E++ LQE+ ELR+RL+ T + E LE E + + LE+EL +++EEL+K +K RR+Q
Sbjct: 40 ERMKLLQEENEELRRRLASATRRTEALERELEIGQDCLELELGQSREELDKFKDKFRRLQ 99
Query: 62 SNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELYR 121
++Y A QR NQELEDKL+ + + E +++ L EIV L + LL+AK TI+KL E NE YR
Sbjct: 100 NSYTASQRTNQELEDKLHTLIKKAEMDRKTLDWEIVELTNKLLDAKNTINKLEELNERYR 159
Query: 122 KDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEK-HGCSLPSPLCHPAYADSVPT 180
DCNLA QLL+C++++ R HK ++LP + Q+ V H+ + P P A VPT
Sbjct: 160 LDCNLAVQLLKCNKSHFRNHKFADLPCELQDMVRKHLHSGQEAASPGPAPSLAPGAVVPT 219
Query: 181 CVIAKVLEKPDPASLSSRLSDASARDLA--------FCDGV-------EKPG-PRPPYKG 224
VIA+VLEKP+ L+S S ++ R LA +GV PG P P G
Sbjct: 220 SVIARVLEKPESLLLNSAQSGSAGRPLAEDVFVHVDMSEGVPGDPASPPAPGSPTPQPNG 279
Query: 225 DIYCSDTALYCPEE 238
+ + TA PEE
Sbjct: 280 ECHSLGTARGSPEE 293
>gi|225690493 tight junction associated protein 1 isoform b [Homo
sapiens]
Length = 547
Score = 172 bits (437), Expect = 6e-43
Identities = 106/254 (41%), Positives = 151/254 (59%), Gaps = 17/254 (6%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQ 61
E++ LQE+ ELR+RL+ T + E LE E + + LE+EL +++EEL+K +K RR+Q
Sbjct: 40 ERMKLLQEENEELRRRLASATRRTEALERELEIGQDCLELELGQSREELDKFKDKFRRLQ 99
Query: 62 SNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELYR 121
++Y A QR NQELEDKL+ + + E +++ L EIV L + LL+AK TI+KL E NE YR
Sbjct: 100 NSYTASQRTNQELEDKLHTLIKKAEMDRKTLDWEIVELTNKLLDAKNTINKLEELNERYR 159
Query: 122 KDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEK-HGCSLPSPLCHPAYADSVPT 180
DCNLA QLL+C++++ R HK ++LP + Q+ V H+ + P P A VPT
Sbjct: 160 LDCNLAVQLLKCNKSHFRNHKFADLPCELQDMVRKHLHSGQEAASPGPAPSLAPGAVVPT 219
Query: 181 CVIAKVLEKPDPASLSSRLSDASARDLA--------FCDGV-------EKPG-PRPPYKG 224
VIA+VLEKP+ L+S S ++ R LA +GV PG P P G
Sbjct: 220 SVIARVLEKPESLLLNSAQSGSAGRPLAEDVFVHVDMSEGVPGDPASPPAPGSPTPQPNG 279
Query: 225 DIYCSDTALYCPEE 238
+ + TA PEE
Sbjct: 280 ECHSLGTARGSPEE 293
>gi|225690491 tight junction associated protein 1 isoform b [Homo
sapiens]
Length = 547
Score = 172 bits (437), Expect = 6e-43
Identities = 106/254 (41%), Positives = 151/254 (59%), Gaps = 17/254 (6%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQ 61
E++ LQE+ ELR+RL+ T + E LE E + + LE+EL +++EEL+K +K RR+Q
Sbjct: 40 ERMKLLQEENEELRRRLASATRRTEALERELEIGQDCLELELGQSREELDKFKDKFRRLQ 99
Query: 62 SNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELYR 121
++Y A QR NQELEDKL+ + + E +++ L EIV L + LL+AK TI+KL E NE YR
Sbjct: 100 NSYTASQRTNQELEDKLHTLIKKAEMDRKTLDWEIVELTNKLLDAKNTINKLEELNERYR 159
Query: 122 KDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEK-HGCSLPSPLCHPAYADSVPT 180
DCNLA QLL+C++++ R HK ++LP + Q+ V H+ + P P A VPT
Sbjct: 160 LDCNLAVQLLKCNKSHFRNHKFADLPCELQDMVRKHLHSGQEAASPGPAPSLAPGAVVPT 219
Query: 181 CVIAKVLEKPDPASLSSRLSDASARDLA--------FCDGV-------EKPG-PRPPYKG 224
VIA+VLEKP+ L+S S ++ R LA +GV PG P P G
Sbjct: 220 SVIARVLEKPESLLLNSAQSGSAGRPLAEDVFVHVDMSEGVPGDPASPPAPGSPTPQPNG 279
Query: 225 DIYCSDTALYCPEE 238
+ + TA PEE
Sbjct: 280 ECHSLGTARGSPEE 293
>gi|225690489 tight junction associated protein 1 isoform a [Homo
sapiens]
Length = 557
Score = 166 bits (420), Expect = 6e-41
Identities = 106/264 (40%), Positives = 151/264 (57%), Gaps = 27/264 (10%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQ 61
E++ LQE+ ELR+RL+ T + E LE E + + LE+EL +++EEL+K +K RR+Q
Sbjct: 40 ERMKLLQEENEELRRRLASATRRTEALERELEIGQDCLELELGQSREELDKFKDKFRRLQ 99
Query: 62 SNYMALQRINQELEDKLYRMG----------QHYEEEKRALSHEIVALNSHLLEAKVTID 111
++Y A QR NQELEDKL+ + + E +++ L EIV L + LL+AK TI+
Sbjct: 100 NSYTASQRTNQELEDKLHTLASLSHSWIFAIKKAEMDRKTLDWEIVELTNKLLDAKNTIN 159
Query: 112 KLSEDNELYRKDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEK-HGCSLPSPLC 170
KL E NE YR DCNLA QLL+C++++ R HK ++LP + Q+ V H+ + P P
Sbjct: 160 KLEELNERYRLDCNLAVQLLKCNKSHFRNHKFADLPCELQDMVRKHLHSGQEAASPGPAP 219
Query: 171 HPAYADSVPTCVIAKVLEKPDPASLSSRLSDASARDLA--------FCDGV-------EK 215
A VPT VIA+VLEKP+ L+S S ++ R LA +GV
Sbjct: 220 SLAPGAVVPTSVIARVLEKPESLLLNSAQSGSAGRPLAEDVFVHVDMSEGVPGDPASPPA 279
Query: 216 PG-PRPPYKGDIYCSDTALYCPEE 238
PG P P G+ + TA PEE
Sbjct: 280 PGSPTPQPNGECHSLGTARGSPEE 303
>gi|225690487 tight junction associated protein 1 isoform a [Homo
sapiens]
Length = 557
Score = 166 bits (420), Expect = 6e-41
Identities = 106/264 (40%), Positives = 151/264 (57%), Gaps = 27/264 (10%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQ 61
E++ LQE+ ELR+RL+ T + E LE E + + LE+EL +++EEL+K +K RR+Q
Sbjct: 40 ERMKLLQEENEELRRRLASATRRTEALERELEIGQDCLELELGQSREELDKFKDKFRRLQ 99
Query: 62 SNYMALQRINQELEDKLYRMG----------QHYEEEKRALSHEIVALNSHLLEAKVTID 111
++Y A QR NQELEDKL+ + + E +++ L EIV L + LL+AK TI+
Sbjct: 100 NSYTASQRTNQELEDKLHTLASLSHSWIFAIKKAEMDRKTLDWEIVELTNKLLDAKNTIN 159
Query: 112 KLSEDNELYRKDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEK-HGCSLPSPLC 170
KL E NE YR DCNLA QLL+C++++ R HK ++LP + Q+ V H+ + P P
Sbjct: 160 KLEELNERYRLDCNLAVQLLKCNKSHFRNHKFADLPCELQDMVRKHLHSGQEAASPGPAP 219
Query: 171 HPAYADSVPTCVIAKVLEKPDPASLSSRLSDASARDLA--------FCDGV-------EK 215
A VPT VIA+VLEKP+ L+S S ++ R LA +GV
Sbjct: 220 SLAPGAVVPTSVIARVLEKPESLLLNSAQSGSAGRPLAEDVFVHVDMSEGVPGDPASPPA 279
Query: 216 PG-PRPPYKGDIYCSDTALYCPEE 238
PG P P G+ + TA PEE
Sbjct: 280 PGSPTPQPNGECHSLGTARGSPEE 303
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 50.4 bits (119), Expect = 4e-06
Identities = 65/249 (26%), Positives = 90/249 (36%), Gaps = 34/249 (13%)
Query: 351 KATAAVAAPLEAEVAPGFGRTMSPYPAETFRFPASPGPQQALMPPNLWSLRAKPGTARLP 410
KA A AA A APG ++P P P SP P + P L L A R P
Sbjct: 7 KAKAGAAARTPAARAPGL---LTPRP------PGSPRPPPPVTPAALRVLGAAGAVGRKP 57
Query: 411 GEDMRGQWRPLSVEDIGAYSYPVSAAGRASPCSFSERYYGGAG--------------GSP 456
+ G ++ + + P +AG +S S G G SP
Sbjct: 58 LAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSP 117
Query: 457 GKKADGRASPLYASYKADSFSEGDDLSQGHLAEP---CFLRAGGDLSLSPGRSADPLPGY 513
G +A G P K S + +++G E L AG S P P
Sbjct: 118 G-RASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM 176
Query: 514 APSEGGDGDRLGVQLCGTASSPE-PEQGSRDSLEPSSMEASPEMHPAARLSPQQAFPRTG 572
A G +G+ ++ P P +G R S+ +S ++ E PAAR P +
Sbjct: 177 ARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRP------SA 230
Query: 573 GSGLSRKDS 581
G GL R S
Sbjct: 231 GGGLQRPAS 239
Score = 33.9 bits (76), Expect = 0.43
Identities = 68/272 (25%), Positives = 94/272 (34%), Gaps = 53/272 (19%)
Query: 339 PATTYEGSPRFAKATAAVAAPLEAE--------VAPGFGRTMSPYPAETF---RFPASPG 387
P ++ G F+ + + +PL AP SP + T R P +PG
Sbjct: 534 PPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPG 593
Query: 388 PQQALMPPNLWSLRAKPGTARLPGEDMRGQWRPLSVEDIGAYSYPVSAAGRASPCSFSER 447
P ++ P L +L PG P R LS D+ +S ++ +
Sbjct: 594 PDTSVSGPRL-TLALAPGP---PPPPSRSPSSTLSGPDLAGHSSSATSTPEELR-GYDSG 648
Query: 448 YYGGAGGSPGKKADGRASPLYASYKADSFSEGDDLSQGHLAEPCFLRAGGDLSL------ 501
GGA SP A+ L A + A ++S G A P R L
Sbjct: 649 PEGGAAASPPPDAE-----LAACHPA-AWSRGP-------APPLAFRGAPGAPLPWPPAT 695
Query: 502 SPG--------------RSADPLPGY---APSEGGDGDRLGVQLCGTASSPEPEQGSRDS 544
PG SA P PG PS G G + ASS P+Q
Sbjct: 696 GPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGE 755
Query: 545 LEPSSMEASPEMHPAAR-LSPQQAFPRTGGSG 575
L +++AS H +R L A GGSG
Sbjct: 756 LPLGALQASVVQHLLSRTLLLAAAEGAAGGSG 787
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 50.4 bits (119), Expect = 4e-06
Identities = 65/249 (26%), Positives = 90/249 (36%), Gaps = 34/249 (13%)
Query: 351 KATAAVAAPLEAEVAPGFGRTMSPYPAETFRFPASPGPQQALMPPNLWSLRAKPGTARLP 410
KA A AA A APG ++P P P SP P + P L L A R P
Sbjct: 7 KAKAGAAARTPAARAPGL---LTPRP------PGSPRPPPPVTPAALRVLGAAGAVGRKP 57
Query: 411 GEDMRGQWRPLSVEDIGAYSYPVSAAGRASPCSFSERYYGGAG--------------GSP 456
+ G ++ + + P +AG +S S G G SP
Sbjct: 58 LAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSP 117
Query: 457 GKKADGRASPLYASYKADSFSEGDDLSQGHLAEP---CFLRAGGDLSLSPGRSADPLPGY 513
G +A G P K S + +++G E L AG S P P
Sbjct: 118 G-RASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM 176
Query: 514 APSEGGDGDRLGVQLCGTASSPE-PEQGSRDSLEPSSMEASPEMHPAARLSPQQAFPRTG 572
A G +G+ ++ P P +G R S+ +S ++ E PAAR P +
Sbjct: 177 ARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRP------SA 230
Query: 573 GSGLSRKDS 581
G GL R S
Sbjct: 231 GGGLQRPAS 239
Score = 33.9 bits (76), Expect = 0.43
Identities = 68/272 (25%), Positives = 94/272 (34%), Gaps = 53/272 (19%)
Query: 339 PATTYEGSPRFAKATAAVAAPLEAE--------VAPGFGRTMSPYPAETF---RFPASPG 387
P ++ G F+ + + +PL AP SP + T R P +PG
Sbjct: 803 PPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPG 862
Query: 388 PQQALMPPNLWSLRAKPGTARLPGEDMRGQWRPLSVEDIGAYSYPVSAAGRASPCSFSER 447
P ++ P L +L PG P R LS D+ +S ++ +
Sbjct: 863 PDTSVSGPRL-TLALAPGP---PPPPSRSPSSTLSGPDLAGHSSSATSTPEELR-GYDSG 917
Query: 448 YYGGAGGSPGKKADGRASPLYASYKADSFSEGDDLSQGHLAEPCFLRAGGDLSL------ 501
GGA SP A+ L A + A ++S G A P R L
Sbjct: 918 PEGGAAASPPPDAE-----LAACHPA-AWSRGP-------APPLAFRGAPGAPLPWPPAT 964
Query: 502 SPG--------------RSADPLPGY---APSEGGDGDRLGVQLCGTASSPEPEQGSRDS 544
PG SA P PG PS G G + ASS P+Q
Sbjct: 965 GPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGE 1024
Query: 545 LEPSSMEASPEMHPAAR-LSPQQAFPRTGGSG 575
L +++AS H +R L A GGSG
Sbjct: 1025 LPLGALQASVVQHLLSRTLLLAAAEGAAGGSG 1056
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 46.2 bits (108), Expect = 8e-05
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 7 LQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQ-------EELEKVTEKLRR 59
L++ +GE+R+ H K E E S R LE EL AQ +E ++++EKL+
Sbjct: 866 LKKYEGEIRQLEEALVHA-RKEEKEAVSARRALENELEAAQGNLSQTTQEQKQLSEKLKE 924
Query: 60 IQSNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDN 117
L+R+ E+E++ + +G+ E+ ++ ++ + A + LE + +D+ E N
Sbjct: 925 ESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQLDEYKEKN 982
Score = 38.9 bits (89), Expect = 0.013
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 8 QEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMAL 67
Q+ E R+R+ +L E L+ L ++ EL K E+L +++
Sbjct: 637 QQNIKEERERMRANLEELRSQHNEKVEENSTLQQRLEESEGELRKNLEELFQVKMEREQH 696
Query: 68 QRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKL----SEDNELYRK 122
Q ++L+D+L M + KR+ E AL LL+AK + L E +L RK
Sbjct: 697 QTEIRDLQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRK 755
Score = 33.5 bits (75), Expect = 0.57
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 11 KGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMALQ-- 68
KG L++ +S +++KL+ ++D+ L + A + +E + + + + +
Sbjct: 764 KGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQDQAGTEMR 823
Query: 69 -RINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDK 112
++ QE +KL + E L +I L +AK T+ K
Sbjct: 824 VKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKAKETLKK 868
>gi|62414289 vimentin [Homo sapiens]
Length = 466
Score = 44.3 bits (103), Expect = 3e-04
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 26 EKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRI-QSNYMALQRINQELEDKLYRMGQH 84
+ + TEF +TR ++EL+ + +K+R + Q N + L + Q R+G
Sbjct: 90 DAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDL 149
Query: 85 YEEEKRALSHEIVALNSHLLEAKVTIDKLSED 116
YEEE R L ++ L + +V D L+ED
Sbjct: 150 YEEEMRELRRQVDQLTNDKARVEVERDNLAED 181
Score = 30.4 bits (67), Expect = 4.8
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 8 QEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQS----- 62
+E+ ELR+++ T+ ++E E D+ + + QEE+ + E +QS
Sbjct: 151 EEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDV 210
Query: 63 NYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTID 111
+ +L R+ +LE K+ + + K+ EI L + + E V ID
Sbjct: 211 DNASLARL--DLERKVESLQEEIAFLKKLHEEEIQELQAQIQEQHVQID 257
>gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo
sapiens]
Length = 434
Score = 44.3 bits (103), Expect = 3e-04
Identities = 33/178 (18%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYL-------------EIELRRAQE 48
+++ + ++ L+K + +++EKLE +H + E+EL+ ++
Sbjct: 49 QRMRKMSQEVCSLKKEKKHDKYRVEKLERSLSKLKHQMAEPLPPEPPAVPSEVELQHLRK 108
Query: 49 ELEKVTEKLRRIQSNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKV 108
ELE+V +L+ + +N+ +++L + +E++ L + L L E +
Sbjct: 109 ELERVAGELQAQVEYNQRISLLNEGQKERLREQEERLQEQQERLPEQEERL-QQLAEPQN 167
Query: 109 TIDKLSEDNELYRKDCNLAAQLLQCSQTYGRVHKVSELPSDFQERVSLHMEKHGCSLP 166
+ +L+ +N + L Q+ + + G+V + L + Q++ L + +LP
Sbjct: 168 SFKELNNEN---KSVLQLEQQVKELQEKLGKVKETERLEAASQQKQQLTAQLSLMALP 222
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 43.5 bits (101), Expect = 5e-04
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 3 KLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQS 62
+L L+++ L + ++E LETE L E +EE ++++ + +QS
Sbjct: 414 QLETLKQEAATLAANNTQLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDLQS 473
Query: 63 NYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELYRK 122
+ L + +ELE G + +L+ E+ LN+ + + + L + + K
Sbjct: 474 SISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELAGLKQ--QAKEK 531
Query: 123 DCNLAAQLLQCSQ-TYGRVHKVSELPSDFQER 153
LA L Q Q + G H+V +L S +++
Sbjct: 532 QAQLAQTLQQQEQASQGLRHQVEQLSSSLKQK 563
Score = 38.9 bits (89), Expect = 0.013
Identities = 45/182 (24%), Positives = 71/182 (39%), Gaps = 30/182 (16%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFDST-RHYLEIELRRAQEELEKVTEKLRRI 60
E+ + E K E R + HK E+ E E + R LE L++ E + TE LRR
Sbjct: 731 EQQRCISELKAETRSLVEQ--HKRERKELEEERAGRKGLEARLQQLGEAHQAETEVLRRE 788
Query: 61 QSNYMALQRINQELEDKLYR------------------MGQHYEEEKRALSHEIVALNSH 102
+ MA Q + ++L + G ++E+ L E
Sbjct: 789 LAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGAMFQEQLMTLKEECEKARQE 848
Query: 103 LLEAKVTIDKLS---------EDNELYRKDCNLAAQLLQCSQTYGRVHKVSELPSDFQER 153
L EAK + + + NEL NLA L Q + R K+++ S QE+
Sbjct: 849 LQEAKEKVAGIESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEK 908
Query: 154 VS 155
++
Sbjct: 909 MA 910
Score = 33.9 bits (76), Expect = 0.43
Identities = 22/111 (19%), Positives = 52/111 (46%)
Query: 13 ELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMALQRINQ 72
+L+ +S + E+LE + L ++ EL + +++ L++ +
Sbjct: 470 DLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAK 529
Query: 73 ELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELYRKD 123
E + +L + Q E+ + L H++ L+S L + + + +++E E R+D
Sbjct: 530 EKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQD 580
Score = 32.7 bits (73), Expect = 0.97
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Query: 8 QEQKGELRKRLSYTTHKLEKLETE-FDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMA 66
Q +K EL +++ +E E ++ E+EL+ E+ +K TEK R+
Sbjct: 642 QREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQ-QKATEK-ERVAQEKDQ 699
Query: 67 LQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELYRKD 123
LQ Q L++ L EEEKR + + + E K L E ++ RK+
Sbjct: 700 LQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKE 756
Score = 32.3 bits (72), Expect = 1.3
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 1 MEKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYL---EIELRRAQEELEKVTEKL 57
++ L+E+ L+ +LS L +L+ + + ++L ++E +
Sbjct: 370 LQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANN 429
Query: 58 RRIQSNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALN---SHLLEAKVTIDKLS 114
++Q+ L+ + E KL H+EEEK+ LS I L S+L +AK +++ S
Sbjct: 430 TQLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQAS 489
Query: 115 E 115
+
Sbjct: 490 Q 490
Score = 30.0 bits (66), Expect = 6.3
Identities = 47/202 (23%), Positives = 71/202 (35%), Gaps = 21/202 (10%)
Query: 394 PPNLWSLRAKPGT---ARLPGEDMRGQWRPLSVEDIGAYSYPVSAAGRASPCSFSERYYG 450
P + SLRA T ARL D ++ + Y ++ R S S
Sbjct: 1842 PASQASLRATSSTQSLARLGSPDYGNS----ALLSLPGYRPTTRSSARRSQAGVS----- 1892
Query: 451 GAGGSPGKKADGRASPLYASYKADSFSEGDDLSQGHLAEPCFLRAGGDLSLSPGRSADPL 510
+G PG+ + + + D ++ +L Q + P L+ L P S +
Sbjct: 1893 -SGAPPGRNSFYMGTCQDEPEQLDDWNRIAELQQRNRVCPPHLKTCYPLESRPSLSLGTI 1951
Query: 511 PGYAPSEGGDGDRLG------VQLCGTASSPEPEQGSRDSLEPSSMEASPEMHPAARLSP 564
G + L +Q+ +Q R SLEP +PE A P
Sbjct: 1952 TDEEMKTGDPQETLRRASMQPIQIAEGTGITTRQQRKRVSLEPHQGPGTPESKKATSCFP 2011
Query: 565 QQAFPRTGGSGLSRKDSLTKAQ 586
+ PR G RK S T+AQ
Sbjct: 2012 RPMTPRDRHEG--RKQSTTEAQ 2031
>gi|46249351 homer 2 isoform 2 [Homo sapiens]
Length = 354
Score = 43.1 bits (100), Expect = 7e-04
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 8 QEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMAL 67
+E+ +L++R+ +L + ETE R EI + + E E V+EKL A
Sbjct: 243 KEKNTQLKRRIEELEAELREKETELKDLRKQSEI-IPQLMSECEYVSEKLE-------AA 294
Query: 68 QRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSE 115
+R NQ LEDK+ + EE K H V L S L ID L +
Sbjct: 295 ERDNQNLEDKVRSLKTDIEESKYRQRHLKVELKSFLEVLDGKIDDLHD 342
>gi|46249349 homer 2 isoform 1 [Homo sapiens]
Length = 343
Score = 43.1 bits (100), Expect = 7e-04
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 8 QEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMAL 67
+E+ +L++R+ +L + ETE R EI + + E E V+EKL A
Sbjct: 232 KEKNTQLKRRIEELEAELREKETELKDLRKQSEI-IPQLMSECEYVSEKLE-------AA 283
Query: 68 QRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSE 115
+R NQ LEDK+ + EE K H V L S L ID L +
Sbjct: 284 ERDNQNLEDKVRSLKTDIEESKYRQRHLKVELKSFLEVLDGKIDDLHD 331
>gi|110349797 homer 2 isoform 4 [Homo sapiens]
Length = 299
Score = 43.1 bits (100), Expect = 7e-04
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 8 QEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMAL 67
+E+ +L++R+ +L + ETE R EI + + E E V+EKL A
Sbjct: 188 KEKNTQLKRRIEELEAELREKETELKDLRKQSEI-IPQLMSECEYVSEKLE-------AA 239
Query: 68 QRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSE 115
+R NQ LEDK+ + EE K H V L S L ID L +
Sbjct: 240 ERDNQNLEDKVRSLKTDIEESKYRQRHLKVELKSFLEVLDGKIDDLHD 287
>gi|110349794 homer 2 isoform 3 [Homo sapiens]
Length = 288
Score = 43.1 bits (100), Expect = 7e-04
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 8 QEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMAL 67
+E+ +L++R+ +L + ETE R EI + + E E V+EKL A
Sbjct: 177 KEKNTQLKRRIEELEAELREKETELKDLRKQSEI-IPQLMSECEYVSEKLE-------AA 228
Query: 68 QRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSE 115
+R NQ LEDK+ + EE K H V L S L ID L +
Sbjct: 229 ERDNQNLEDKVRSLKTDIEESKYRQRHLKVELKSFLEVLDGKIDDLHD 276
>gi|109255239 centrosomal protein 63 isoform b [Homo sapiens]
Length = 541
Score = 42.7 bits (99), Expect = 0.001
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 6 ALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQE-------ELEKVTEKLR 58
AL EQ ++ +L KLE +E S +L +L RA + E+E++T ++
Sbjct: 176 ALAEQSEIIQAQLVNRKQKLESVELSSQSEIQHLSSKLERANDTICANELEIERLTMRVN 235
Query: 59 RIQSNYMALQRINQELEDKLY---RMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSE 115
+ M + + Q+ E+KL ++ + +EEKR L + + + + EA++ +KL E
Sbjct: 236 DLVGTSMTVLQEQQQKEEKLRESEKLLEALQEEKRELKAALQSQENLIHEARIQKEKLQE 295
>gi|22095367 centrosomal protein 63 isoform a [Homo sapiens]
Length = 703
Score = 42.7 bits (99), Expect = 0.001
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 6 ALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQE-------ELEKVTEKLR 58
AL EQ ++ +L KLE +E S +L +L RA + E+E++T ++
Sbjct: 176 ALAEQSEIIQAQLVNRKQKLESVELSSQSEIQHLSSKLERANDTICANELEIERLTMRVN 235
Query: 59 RIQSNYMALQRINQELEDKLY---RMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSE 115
+ M + + Q+ E+KL ++ + +EEKR L + + + + EA++ +KL E
Sbjct: 236 DLVGTSMTVLQEQQQKEEKLRESEKLLEALQEEKRELKAALQSQENLIHEARIQKEKLQE 295
>gi|109255236 centrosomal protein 63 isoform d [Homo sapiens]
Length = 475
Score = 42.7 bits (99), Expect = 0.001
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 6 ALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQE-------ELEKVTEKLR 58
AL EQ ++ +L KLE +E S +L +L RA + E+E++T ++
Sbjct: 176 ALAEQSEIIQAQLVNRKQKLESVELSSQSEIQHLSSKLERANDTICANELEIERLTMRVN 235
Query: 59 RIQSNYMALQRINQELEDKLY---RMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSE 115
+ M + + Q+ E+KL ++ + +EEKR L + + + + EA++ +KL E
Sbjct: 236 DLVGTSMTVLQEQQQKEEKLRESEKLLEALQEEKRELKAALQSQENLIHEARIQKEKLQE 295
Score = 32.7 bits (73), Expect = 0.97
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 4 LSALQEQKGELRKRLSYTTHKL-------EKLETEFDSTRHYLEIEL----------RRA 46
L ALQE+K EL+ L + + EKL+ + +T +E ++
Sbjct: 262 LEALQEEKRELKAALQSQENLIHEARIQKEKLQEKVKATNTQHAVEAISLESVSATCKQL 321
Query: 47 QEELEKVTEKLRRIQSNYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEA 106
+EL + E+L+R++++ + ++L++++ + Q Y + EI L L +
Sbjct: 322 SQELMEKYEELKRMEAHNNEYKAEIKKLKEQILQGEQSYSSALEGMKMEISHLTQELHQR 381
Query: 107 KVTI 110
+TI
Sbjct: 382 DITI 385
>gi|7705415 hook homolog 1 [Homo sapiens]
Length = 728
Score = 42.7 bits (99), Expect = 0.001
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 3 KLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQS 62
+++ LQ++K L KL++L+ FD + + AQ +LE++ E+ R+++
Sbjct: 207 QVTTLQDEKNSLVSENEMMNEKLDQLDGSFDDPNTVVAKKYFHAQLQLEQLQEENFRLEA 266
Query: 63 NYMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTID---KLSEDNEL 119
+ +ELE +L QH +E +L+ E AL + + T D KL E+
Sbjct: 267 AKDDYRVHCEELEKQLIEF-QHRNDELTSLAEETRALKDEIDVLRATSDKANKLESTVEI 325
Query: 120 YRK 122
YR+
Sbjct: 326 YRQ 328
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 8 QEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRI---QSNY 64
++Q E+ KRLS++ +L E S R +EL + +L+ +TEK + + Q
Sbjct: 51 EQQYFEIEKRLSHSQERLVNETRECQSLR----LELEKLNNQLKALTEKNKELEIAQDRN 106
Query: 65 MALQ----RINQELEDK---LYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLS-ED 116
+A+Q R +ELE + L R + +E L+ ++ LN L E+ T +L +
Sbjct: 107 IAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKESNTTKGELQLKL 166
Query: 117 NELYRKDCNLAAQLLQCSQTYGRVHKV-----SELPSDFQERVSLHMEK 160
+EL D ++ + + Q +H +EL + E ++L EK
Sbjct: 167 DELQASDVSVKYREKRLEQEKELLHSQNTWLNTELKTKTDELLALGREK 215
Score = 36.6 bits (83), Expect = 0.067
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 23/171 (13%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQ 61
E+ ++QE + EL++ L+ K + LE++ ++ L+ L + E + E+ ++Q
Sbjct: 1468 EQHVSVQEMQ-ELKETLNQAETKSKSLESQVEN----LQKTLSEKETEARNLQEQTVQLQ 1522
Query: 62 SNYMALQRINQELEDKLYR---MGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDN- 117
S L R+ Q+L+D+ + + Q E++ IVA S + D+L+++N
Sbjct: 1523 SE---LSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENE 1579
Query: 118 ELYRKDCNLAAQLLQC--------SQTYGRVHKVSELPSDFQERVSLHMEK 160
EL +++ L Q + SQ GR+ ++ + QER H+E+
Sbjct: 1580 ELKQRNGALDQQKDELDVRITALKSQYEGRISRLERELREHQER---HLEQ 1627
Score = 35.4 bits (80), Expect = 0.15
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQ 61
++L Q++ ++ + + T +LE + + T L EL E+++++ EKL+
Sbjct: 97 KELEIAQDRNIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKESN 156
Query: 62 SNYMALQRINQELE----DKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKL---- 113
+ LQ EL+ YR + E+EK L + LN+ E K D+L
Sbjct: 157 TTKGELQLKLDELQASDVSVKYR-EKRLEQEKELLHSQNTWLNT---ELKTKTDELLALG 212
Query: 114 -SEDNELYRKDCNL 126
+ NE+ CNL
Sbjct: 213 REKGNEILELKCNL 226
Score = 29.6 bits (65), Expect = 8.2
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 29/140 (20%)
Query: 1 MEKLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLR-- 58
+ +L +EQ +L++RL +T +E+ + S L E + +E + + +L+
Sbjct: 938 VSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVRLKES 997
Query: 59 -----RIQSNYMALQRINQELEDKLYR----MGQHYEEEKR------------------A 91
+++ M +++ QEL+D R M Q E K+ A
Sbjct: 998 AEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEALQRASTA 1057
Query: 92 LSHEIVALNSHLLEAKVTID 111
LS+E A +AK+ ++
Sbjct: 1058 LSNEQQARRDCQEQAKIAVE 1077
>gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo
sapiens]
Length = 600
Score = 42.0 bits (97), Expect = 0.002
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 3 KLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQS 62
+LS L EQ L K L + + L+ E + + LR +++E + ++LR +Q
Sbjct: 428 QLSQLHEQCSSLEKELKSEKEQRQALQRELQHEKDTSSL-LRMELQQVEGLKKELRELQD 486
Query: 63 NYMALQRINQELEDKLYRMGQHYEEEK 89
LQ+I +E E L MG H + K
Sbjct: 487 EKAELQKICEEQEQALQEMGLHLSQSK 513
>gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo
sapiens]
Length = 600
Score = 42.0 bits (97), Expect = 0.002
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 3 KLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQS 62
+LS L EQ L K L + + L+ E + + LR +++E + ++LR +Q
Sbjct: 428 QLSQLHEQCSSLEKELKSEKEQRQALQRELQHEKDTSSL-LRMELQQVEGLKKELRELQD 486
Query: 63 NYMALQRINQELEDKLYRMGQHYEEEK 89
LQ+I +E E L MG H + K
Sbjct: 487 EKAELQKICEEQEQALQEMGLHLSQSK 513
>gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo
sapiens]
Length = 708
Score = 42.0 bits (97), Expect = 0.002
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 3 KLSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQS 62
+LS L EQ L K L + + L+ E + + LR +++E + ++LR +Q
Sbjct: 536 QLSQLHEQCSSLEKELKSEKEQRQALQRELQHEKDTSSL-LRMELQQVEGLKKELRELQD 594
Query: 63 NYMALQRINQELEDKLYRMGQHYEEEK 89
LQ+I +E E L MG H + K
Sbjct: 595 EKAELQKICEEQEQALQEMGLHLSQSK 621
>gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens]
Length = 761
Score = 42.0 bits (97), Expect = 0.002
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 11 KGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMALQ-- 68
KG L+K + KL + R+ + I+L + E++TE ++ +Q+ +LQ
Sbjct: 310 KGALKKLIHAA--KLNASLKTLEGERNQIYIQLSEVDKTKEELTEHIKNLQTEQASLQSE 367
Query: 69 -----RINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKL-------SED 116
NQ+L+ KL M + Y+E + L ++ ++ LE + + K+ +E+
Sbjct: 368 NTHFENENQKLQQKLKVMTELYQENEMKLHRKLTVEENYRLEKEEKLSKVDEKISHATEE 427
Query: 117 NELYRK 122
E YRK
Sbjct: 428 LETYRK 433
Score = 37.4 bits (85), Expect = 0.039
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 29/132 (21%)
Query: 4 LSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSN 63
LS L E+K +L ++ S + E E E E E AQ LE EKL R
Sbjct: 82 LSGLIEEKSKLLEKFSLVQKEYEGYEVESSLKDASFEKEATEAQS-LEATCEKLNRS--- 137
Query: 64 YMALQRINQELEDKLYRMGQHYEEEK-----------------RALSHEIVALNSHLLEA 106
N ELED++ + + +EEK ++L E +L S + EA
Sbjct: 138 -------NSELEDEILCLEKELKEEKSKHSEQDELMADISKRIQSLEDESKSLKSQVAEA 190
Query: 107 KVTIDKLSEDNE 118
K+T K+ + NE
Sbjct: 191 KMTF-KIFQMNE 201
Score = 31.2 bits (69), Expect = 2.8
Identities = 65/279 (23%), Positives = 109/279 (39%), Gaps = 56/279 (20%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFD-STRHYLEIELR-------------RAQ 47
E + LQ ++ L+ ++ ++ +KL+ + T Y E E++ +
Sbjct: 352 EHIKNLQTEQASLQSENTHFENENQKLQQKLKVMTELYQENEMKLHRKLTVEENYRLEKE 411
Query: 48 EELEKVTEKLRRIQSNYMALQRINQELEDKLYR-----MGQHYEEEKRALSHEIVALNSH 102
E+L KV EK+ ++ ++LE++L R GQ EK+A + + A N
Sbjct: 412 EKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQGQIISHEKKAHDNWLAARN-- 469
Query: 103 LLEAKVTIDKLSEDNELYRK---DCNLAAQLLQ--------CSQTYGRVHKVSELPSDFQ 151
A+ ++ L ++N R+ + L +LL+ + +GR + P D Q
Sbjct: 470 ---AERNLNDLRKENAHNRQKLTETELKFELLEKDPYALDVPNTAFGRGSRGPGNPLDHQ 526
Query: 152 ERVSLHMEKHGCSLPSPLCHPAYADSVPTCVIAKVLEKPDPASLSSRLSDASARDLAFCD 211
+ G S L P A S D SLS D R +
Sbjct: 527 -----ITNERGESSCDRLTDPHRAPS-------------DTGSLSPPW-DQDRRMMFPPP 567
Query: 212 GVEKP-GPRPPYKGDIYCSDTA-LYCPEERRRDRRPSVD 248
G P PP + D +CS++ L P E R PS+D
Sbjct: 568 GQSYPDSALPPQRQDRFCSNSGRLSGPAELRSFNMPSLD 606
>gi|42740897 CTAGE family, member 5 isoform 1 [Homo sapiens]
Length = 804
Score = 42.0 bits (97), Expect = 0.002
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 11 KGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMALQ-- 68
KG L+K + KL + R+ + I+L + E++TE ++ +Q+ +LQ
Sbjct: 310 KGALKKLIHAA--KLNASLKTLEGERNQIYIQLSEVDKTKEELTEHIKNLQTEQASLQSE 367
Query: 69 -----RINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKL-------SED 116
NQ+L+ KL M + Y+E + L ++ ++ LE + + K+ +E+
Sbjct: 368 NTHFENENQKLQQKLKVMTELYQENEMKLHRKLTVEENYRLEKEEKLSKVDEKISHATEE 427
Query: 117 NELYRK 122
E YRK
Sbjct: 428 LETYRK 433
Score = 37.4 bits (85), Expect = 0.039
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 29/132 (21%)
Query: 4 LSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSN 63
LS L E+K +L ++ S + E E E E E AQ LE EKL R
Sbjct: 82 LSGLIEEKSKLLEKFSLVQKEYEGYEVESSLKDASFEKEATEAQS-LEATCEKLNRS--- 137
Query: 64 YMALQRINQELEDKLYRMGQHYEEEK-----------------RALSHEIVALNSHLLEA 106
N ELED++ + + +EEK ++L E +L S + EA
Sbjct: 138 -------NSELEDEILCLEKELKEEKSKHSEQDELMADISKRIQSLEDESKSLKSQVAEA 190
Query: 107 KVTIDKLSEDNE 118
K+T K+ + NE
Sbjct: 191 KMTF-KIFQMNE 201
Score = 30.0 bits (66), Expect = 6.3
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 19/119 (15%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFD-STRHYLEIELR-------------RAQ 47
E + LQ ++ L+ ++ ++ +KL+ + T Y E E++ +
Sbjct: 352 EHIKNLQTEQASLQSENTHFENENQKLQQKLKVMTELYQENEMKLHRKLTVEENYRLEKE 411
Query: 48 EELEKVTEKLRRIQSNYMALQRINQELEDKLYR-----MGQHYEEEKRALSHEIVALNS 101
E+L KV EK+ ++ ++LE++L R GQ EK+A + + A N+
Sbjct: 412 EKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQGQIISHEKKAHDNWLAARNA 470
>gi|42740901 CTAGE family, member 5 isoform 4 [Homo sapiens]
Length = 775
Score = 42.0 bits (97), Expect = 0.002
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 11 KGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMALQ-- 68
KG L+K + KL + R+ + I+L + E++TE ++ +Q+ +LQ
Sbjct: 281 KGALKKLIHAA--KLNASLKTLEGERNQIYIQLSEVDKTKEELTEHIKNLQTEQASLQSE 338
Query: 69 -----RINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKL-------SED 116
NQ+L+ KL M + Y+E + L ++ ++ LE + + K+ +E+
Sbjct: 339 NTHFENENQKLQQKLKVMTELYQENEMKLHRKLTVEENYRLEKEEKLSKVDEKISHATEE 398
Query: 117 NELYRK 122
E YRK
Sbjct: 399 LETYRK 404
Score = 37.4 bits (85), Expect = 0.039
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 29/132 (21%)
Query: 4 LSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSN 63
LS L E+K +L ++ S + E E E E E AQ LE EKL R
Sbjct: 53 LSGLIEEKSKLLEKFSLVQKEYEGYEVESSLKDASFEKEATEAQS-LEATCEKLNRS--- 108
Query: 64 YMALQRINQELEDKLYRMGQHYEEEK-----------------RALSHEIVALNSHLLEA 106
N ELED++ + + +EEK ++L E +L S + EA
Sbjct: 109 -------NSELEDEILCLEKELKEEKSKHSEQDELMADISKRIQSLEDESKSLKSQVAEA 161
Query: 107 KVTIDKLSEDNE 118
K+T K+ + NE
Sbjct: 162 KMTF-KIFQMNE 172
Score = 30.0 bits (66), Expect = 6.3
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 19/119 (15%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFD-STRHYLEIELR-------------RAQ 47
E + LQ ++ L+ ++ ++ +KL+ + T Y E E++ +
Sbjct: 323 EHIKNLQTEQASLQSENTHFENENQKLQQKLKVMTELYQENEMKLHRKLTVEENYRLEKE 382
Query: 48 EELEKVTEKLRRIQSNYMALQRINQELEDKLYR-----MGQHYEEEKRALSHEIVALNS 101
E+L KV EK+ ++ ++LE++L R GQ EK+A + + A N+
Sbjct: 383 EKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQGQIISHEKKAHDNWLAARNA 441
>gi|42740905 CTAGE family, member 5 isoform 2 [Homo sapiens]
Length = 792
Score = 42.0 bits (97), Expect = 0.002
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 11 KGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSNYMALQ-- 68
KG L+K + KL + R+ + I+L + E++TE ++ +Q+ +LQ
Sbjct: 298 KGALKKLIHAA--KLNASLKTLEGERNQIYIQLSEVDKTKEELTEHIKNLQTEQASLQSE 355
Query: 69 -----RINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKL-------SED 116
NQ+L+ KL M + Y+E + L ++ ++ LE + + K+ +E+
Sbjct: 356 NTHFENENQKLQQKLKVMTELYQENEMKLHRKLTVEENYRLEKEEKLSKVDEKISHATEE 415
Query: 117 NELYRK 122
E YRK
Sbjct: 416 LETYRK 421
Score = 37.4 bits (85), Expect = 0.039
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 29/132 (21%)
Query: 4 LSALQEQKGELRKRLSYTTHKLEKLETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSN 63
LS L E+K +L ++ S + E E E E E AQ LE EKL R
Sbjct: 70 LSGLIEEKSKLLEKFSLVQKEYEGYEVESSLKDASFEKEATEAQS-LEATCEKLNRS--- 125
Query: 64 YMALQRINQELEDKLYRMGQHYEEEK-----------------RALSHEIVALNSHLLEA 106
N ELED++ + + +EEK ++L E +L S + EA
Sbjct: 126 -------NSELEDEILCLEKELKEEKSKHSEQDELMADISKRIQSLEDESKSLKSQVAEA 178
Query: 107 KVTIDKLSEDNE 118
K+T K+ + NE
Sbjct: 179 KMTF-KIFQMNE 189
Score = 30.0 bits (66), Expect = 6.3
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 19/119 (15%)
Query: 2 EKLSALQEQKGELRKRLSYTTHKLEKLETEFD-STRHYLEIELR-------------RAQ 47
E + LQ ++ L+ ++ ++ +KL+ + T Y E E++ +
Sbjct: 340 EHIKNLQTEQASLQSENTHFENENQKLQQKLKVMTELYQENEMKLHRKLTVEENYRLEKE 399
Query: 48 EELEKVTEKLRRIQSNYMALQRINQELEDKLYR-----MGQHYEEEKRALSHEIVALNS 101
E+L KV EK+ ++ ++LE++L R GQ EK+A + + A N+
Sbjct: 400 EKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQGQIISHEKKAHDNWLAARNA 458
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,635,457
Number of Sequences: 37866
Number of extensions: 1485741
Number of successful extensions: 8231
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 563
Number of HSP's that attempted gapping in prelim test: 6382
Number of HSP's gapped (non-prelim): 2234
length of query: 593
length of database: 18,247,518
effective HSP length: 108
effective length of query: 485
effective length of database: 14,157,990
effective search space: 6866625150
effective search space used: 6866625150
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.