Guide to the Human Genome
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Name: CEP63 Sequence: fasta or formatted (475aa) NCBI GI: 109255236
Description:

centrosomal protein 63 isoform d

Referenced in:

Centrosome

Other entries for this name:
alt prot [495aa] centrosomal protein 63 isoform c
alt prot [541aa] centrosomal protein 63 isoform b
alt prot [703aa] centrosomal protein 63 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         27           2
 C cysteine            1.1          5           1
 D aspartate           2.1         10           1
 E glutamate          15.8         75           2
 F phenylalanine       1.1          5           1
 G glycine             3.2         15           3
 H histidine           3.6         17           1
 I isoleucine          5.3         25           2
 K lysine             10.1         48           2
 L leucine            12.8         61           2
 M methionine          3.8         18           1
 N asparagine          2.7         13           2
 P proline             0.4          2           1
 Q glutamine           9.7         46           3
 R arginine            5.9         28           1
 S serine              7.4         35           3
 T threonine           3.8         18           1
 V valine              3.8         18           1
 W tryptophan          0.6          3           1
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centrosomal protein 63 isoform d 
CEP63                 0.930   centrosomal protein 63 isoform c 
CEP63                 0.905   centrosomal protein 63 isoform b 
CEP63                 0.905   centrosomal protein 63 isoform a 
CCDC67                0.224   coiled-coil domain containing 67 
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH9                  0.078   myosin, heavy polypeptide 9, non-muscle 
CCDC18                0.076   sarcoma antigen NY-SAR-41 
CGNL1                 0.074   cingulin-like 1 
LOC440243             0.071   PREDICTED: Putative golgin subfamily A member 6-lik...
MYH10                 0.070   myosin, heavy polypeptide 10, non-muscle 
EEA1                  0.070   early endosome antigen 1, 162kD 
GOLGA4                0.070   golgi autoantigen, golgin subfamily a, 4 
LOC283767             0.070   golgi autoantigen, golgin subfamily a-like 
CEP250                0.070   centrosomal protein 2 
NUMA1                 0.069   nuclear mitotic apparatus protein 1 
LOC283685             0.067   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CCDC88A               0.067   coiled-coil domain containing 88A isoform 2 
LOC727832             0.067   golgi autoantigen, golgin subfamily a-like 
FAM184A               0.065   hypothetical protein LOC79632 isoform 2 
FAM184A               0.065   hypothetical protein LOC79632 isoform 1 
CCDC88A               0.065   coiled-coil domain containing 88A isoform 1 
MYH7                  0.064   myosin, heavy chain 7, cardiac muscle, beta 
CCDC30                0.064   coiled-coil domain containing 30 
KTN1                  0.063   kinectin 1 isoform c 
CENPE                 0.062   centromere protein E 
LOC283685             0.062   PREDICTED: golgi autoantigen, golgin subfamily a-li...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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