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Search of human proteins with 22749387
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22749387 zinc finger, CCHC domain containing 5 [Homo
sapiens]
(475 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22749387 zinc finger, CCHC domain containing 5 [Homo sapiens] 982 0.0
gi|94421473 paternally expressed 10 isoform RF1 [Homo sapiens] 122 9e-28
gi|94421475 paternally expressed 10 isoform RF1/2 [Homo sapiens] 120 4e-27
gi|167466262 zinc finger, CCHC domain containing 16 [Homo sapiens] 92 1e-18
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens] 79 7e-15
gi|199562283 retrotransposon-like 1 [Homo sapiens] 62 9e-10
gi|6912480 leucine zipper, down-regulated in cancer 1 [Homo sapi... 55 1e-07
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 55 1e-07
gi|110349719 titin isoform N2-A [Homo sapiens] 54 2e-07
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 53 5e-07
gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens] 52 1e-06
gi|118200335 family with sequence similarity 127, member A [Homo... 51 2e-06
gi|118200337 family with sequence similarity 127, member C [Homo... 51 2e-06
gi|239757911 PREDICTED: similar to Family with sequence similari... 51 3e-06
gi|239745855 PREDICTED: hypothetical protein XP_002343606 [Homo ... 51 3e-06
gi|118200333 family with sequence similarity 127, member B isofo... 51 3e-06
gi|75677612 leucine rich repeat containing 37, member A3 [Homo s... 50 4e-06
gi|239740955 PREDICTED: similar to c114 SLIT-like testicular pro... 50 6e-06
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro... 50 6e-06
gi|116325993 c114 SLIT-like testicular protein [Homo sapiens] 50 6e-06
gi|110665701 leucine rich repeat containing 37A [Homo sapiens] 50 6e-06
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 49 8e-06
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H... 48 2e-05
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H... 48 2e-05
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 48 2e-05
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 48 2e-05
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 48 2e-05
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 48 2e-05
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 48 2e-05
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 48 2e-05
>gi|22749387 zinc finger, CCHC domain containing 5 [Homo sapiens]
Length = 475
Score = 982 bits (2538), Expect = 0.0
Identities = 475/475 (100%), Positives = 475/475 (100%)
Query: 1 MVEDLAASYIVLKLENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKE 60
MVEDLAASYIVLKLENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKE
Sbjct: 1 MVEDLAASYIVLKLENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKE 60
Query: 61 PQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPAT 120
PQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPAT
Sbjct: 61 PQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPAT 120
Query: 121 RESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQL 180
RESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQL
Sbjct: 121 RESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQL 180
Query: 181 EFLELPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFPQAPIGLEATDFPLQY 240
EFLELPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFPQAPIGLEATDFPLQY
Sbjct: 181 EFLELPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFPQAPIGLEATDFPLQY 240
Query: 241 TLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLDIQSP 300
TLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLDIQSP
Sbjct: 241 TLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLDIQSP 300
Query: 301 LLEQCESFIPVLQDTFDNPENMKDANQCIHQLCQGEGHVATHFHLIAQELNWDESTLWIQ 360
LLEQCESFIPVLQDTFDNPENMKDANQCIHQLCQGEGHVATHFHLIAQELNWDESTLWIQ
Sbjct: 301 LLEQCESFIPVLQDTFDNPENMKDANQCIHQLCQGEGHVATHFHLIAQELNWDESTLWIQ 360
Query: 361 FQEGLASSIQDELSHTSPATNLSDLITQCISLEEKPDPNPLGKSSSAEGDGPESPPAENQ 420
FQEGLASSIQDELSHTSPATNLSDLITQCISLEEKPDPNPLGKSSSAEGDGPESPPAENQ
Sbjct: 361 FQEGLASSIQDELSHTSPATNLSDLITQCISLEEKPDPNPLGKSSSAEGDGPESPPAENQ 420
Query: 421 PMQAAINCPHISEAEWVRWHKGRLCLYCGYPGHFARDCPVKPHQALQAGNIQACQ 475
PMQAAINCPHISEAEWVRWHKGRLCLYCGYPGHFARDCPVKPHQALQAGNIQACQ
Sbjct: 421 PMQAAINCPHISEAEWVRWHKGRLCLYCGYPGHFARDCPVKPHQALQAGNIQACQ 475
>gi|94421473 paternally expressed 10 isoform RF1 [Homo sapiens]
Length = 325
Score = 122 bits (305), Expect = 9e-28
Identities = 89/282 (31%), Positives = 133/282 (47%), Gaps = 39/282 (13%)
Query: 214 IVVETSAASEFPQAPIGLEATDFPLQYTLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEA 273
I + +AA+ P PI E P F G+ L F+ Q +M + +
Sbjct: 59 IELRGAAAAAAPPPPIEEEC---PEDLPEKFDGNPDMLAPFMAQCQIFMEKSTRDFSVDR 115
Query: 274 ALVSFVGNCFSGRAGWWFQLLLDIQSPLLEQCESFIPVLQDTFDNPENMKDANQCIHQLC 333
V FV + +GRA W L+ L+ +F+ ++ F++P+ + A + I +L
Sbjct: 116 VRVCFVTSMMTGRAARWASAKLERSHYLMHNYPAFMMEMKHVFEDPQRREVAKRKIRRLR 175
Query: 334 QGEGHVATH---FHLIAQELNWDESTLWIQFQEGLASSIQDELSHTSPATNLSDLITQCI 390
QG G V + F +IAQ+L+W+E L Q+ EGL+ IQ+ELSH A +LS LI QCI
Sbjct: 176 QGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHIQEELSHLEVAKSLSALIGQCI 235
Query: 391 SLEEKPDPNPLGKSSSAEGDGPESPPAENQPMQAAINCPHI------------------- 431
+E + L ++++A P SPP A+ PHI
Sbjct: 236 HIERR-----LARAAAAR--KPRSPP-------RALVLPHIASHHQVDPTEPVGGARMRL 281
Query: 432 SEAEWVRWHKGRLCLYCGYPGHFARDCPVKPHQALQAGNIQA 473
++ E R K LCLYCG GH+A +CP K ++ AGN A
Sbjct: 282 TQEEKERRRKLNLCLYCGTGGHYADNCPAKASKSSPAGNSPA 323
>gi|94421475 paternally expressed 10 isoform RF1/2 [Homo sapiens]
Length = 708
Score = 120 bits (300), Expect = 4e-27
Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 39/280 (13%)
Query: 214 IVVETSAASEFPQAPIGLEATDFPLQYTLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEA 273
I + +AA+ P PI E P F G+ L F+ Q +M + +
Sbjct: 59 IELRGAAAAAAPPPPIEEEC---PEDLPEKFDGNPDMLAPFMAQCQIFMEKSTRDFSVDR 115
Query: 274 ALVSFVGNCFSGRAGWWFQLLLDIQSPLLEQCESFIPVLQDTFDNPENMKDANQCIHQLC 333
V FV + +GRA W L+ L+ +F+ ++ F++P+ + A + I +L
Sbjct: 116 VRVCFVTSMMTGRAARWASAKLERSHYLMHNYPAFMMEMKHVFEDPQRREVAKRKIRRLR 175
Query: 334 QGEGHVATH---FHLIAQELNWDESTLWIQFQEGLASSIQDELSHTSPATNLSDLITQCI 390
QG G V + F +IAQ+L+W+E L Q+ EGL+ IQ+ELSH A +LS LI QCI
Sbjct: 176 QGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHIQEELSHLEVAKSLSALIGQCI 235
Query: 391 SLEEKPDPNPLGKSSSAEGDGPESPPAENQPMQAAINCPHI------------------- 431
+E + L ++++A P SPP A+ PHI
Sbjct: 236 HIERR-----LARAAAAR--KPRSPP-------RALVLPHIASHHQVDPTEPVGGARMRL 281
Query: 432 SEAEWVRWHKGRLCLYCGYPGHFARDCPVKPHQALQAGNI 471
++ E R K LCLYCG GH+A +CP K ++ AG +
Sbjct: 282 TQEEKERRRKLNLCLYCGTGGHYADNCPAKASKSSPAGKL 321
>gi|167466262 zinc finger, CCHC domain containing 16 [Homo sapiens]
Length = 310
Score = 92.0 bits (227), Expect = 1e-18
Identities = 78/264 (29%), Positives = 111/264 (42%), Gaps = 19/264 (7%)
Query: 231 LEATDFPLQYTLT----FSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGR 286
L T P+ Y+L F GD EFL Q+ +Y+ P A + + S +
Sbjct: 47 LATTVMPVPYSLEHLTQFHGDPANCSEFLTQVTTYLTALQISNPANDAQIKLFFDYLSQQ 106
Query: 287 AGWWFQLLLDIQSPLLEQCESFIPVLQDTFDNPENMKDANQCIHQLCQGEGHVATH---F 343
+ +S LL+Q E+ I Q +F P + + +G+ F
Sbjct: 107 LESCGIISGPDKSTLLKQYENLILEFQQSFGKPTKQEINPLMNAKFDKGDNSSQQDPATF 166
Query: 344 HLIAQELNWDESTLWIQFQEGLASSIQDELSHTSPATNLSDLITQCISLEEKPDPNPLGK 403
HL+AQ L +E+ QF++ LA QDE S T NL DLITQCI L++K P
Sbjct: 167 HLLAQNLICNETNQSGQFEKALADPNQDEESVTDMMDNLPDLITQCIQLDKKHSDRPELL 226
Query: 404 SSSAEGD------------GPESPPAENQPMQAAINCPHISEAEWVRWHKGRLCLYCGYP 451
S + P PP + P+Q ++ A+ R + +LCLYC
Sbjct: 227 QSETQLPLLASLIQHQALFSPTDPPPKKGPIQLREGQLPLTPAKRARQQETQLCLYCSQS 286
Query: 452 GHFARDCPVKPHQALQAGNIQACQ 475
GHF RDC K +A N A Q
Sbjct: 287 GHFTRDCLAKRSRAPATTNNTAHQ 310
>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
Length = 569
Score = 79.3 bits (194), Expect = 7e-15
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 244 FSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLDIQSPLLE 303
FSGD L EFL+QL +++ +P A V+F+ + F+G A W + SPL
Sbjct: 156 FSGDPVYLAEFLMQLETFIADHEVHFPGGAERVAFLISFFTGEAKDWAISVTQEGSPLHA 215
Query: 304 QCESFIPVLQDTFDNPENMKDANQCIHQLCQGE---GHVATHFHLIAQELNWDESTLWIQ 360
F+ ++ F P + A + I +L QG G A F +AQ L+WD+ L Q
Sbjct: 216 NFPRFLDEIRKEFCGPIPPRVAKKAIRKLKQGHCTLGSYADAFQFLAQFLSWDDCRLQNQ 275
Query: 361 FQEGLASSIQDELSHTSPATNLSDLITQCISLEEK---PDPNPL 401
F +GL+ + EL ++ +L +LI +C+ +E K P P PL
Sbjct: 276 FLKGLSEFFRKELLWSTEMADLDELILECVEIERKVRVPKPIPL 319
>gi|199562283 retrotransposon-like 1 [Homo sapiens]
Length = 1358
Score = 62.4 bits (150), Expect = 9e-10
Identities = 78/336 (23%), Positives = 132/336 (39%), Gaps = 33/336 (9%)
Query: 71 PAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPP--M 128
PA+ AQ+ E P P + + LP + +++E + P +E + PP +
Sbjct: 47 PASGPAQEKKE--PPSGPLQEMEELPTD--LLQDMEEPSSGPR-------KEIEDPPNDL 95
Query: 129 AHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEA-PEYQETAAQLEFLELPP 187
++ G A + A + +P + QEA + +E+ + E P
Sbjct: 96 LQDLEESCNGSHQARGDPLSGASDRMKEASVNPSGAREEQEAHTDLKESGRE----ETPQ 151
Query: 188 PQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFPQAPI----GLEATDFPLQYTLT 243
Q E S A EL A S+ L + A G+ A P
Sbjct: 152 EQNQTEHSTA----ELMAMVRSIISLYFRMQDLKEQQRVAEEILIKGINAGQLPAPKH-- 205
Query: 244 FSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLDIQSPLLE 303
FSGD ++ EF+V ++ ++ + V +V N SG A W + LL SPL+
Sbjct: 206 FSGDRREFHEFIVLCQLTLQSYPRMFYNDRLRVGYVINHLSGLALEWAKALLQENSPLIG 265
Query: 304 QCESFIPVLQDTFDNPENMKDANQCIHQLCQGEGHVAT----HFHLIAQELNWDESTLWI 359
+F+ + + F+ + ++ A + + + QG G AT F + L W + L
Sbjct: 266 DFPAFLEAMSEVFEYRQALRVAEEAMFTIRQG-GRSATEYIDEFQSLVPILGWPDEVLQA 324
Query: 360 QFQEGLASSIQDELSHTSPATNLSDLITQCISLEEK 395
+GL I+ L +L LI + +EEK
Sbjct: 325 HLCQGLNEEIRHYLFRVPQPDSLDSLIVLILQIEEK 360
>gi|6912480 leucine zipper, down-regulated in cancer 1 [Homo
sapiens]
Length = 146
Score = 55.5 bits (132), Expect = 1e-07
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 237 PLQYTLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLD 296
P+ + TF+G+S +LPEF+VQ SYM V + + +A V+F+ + +G A W ++
Sbjct: 50 PVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEEWVVPYIE 109
Query: 297 IQSPLLEQCESFIPVLQDTF--DNPENMKDANQ 327
+ SP+L +F+ ++ F D+ E+ D +
Sbjct: 110 MDSPILGDYRAFLDEMKQCFGWDDDEDDDDEEE 142
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 55.1 bits (131), Expect = 1e-07
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 28 EENAALQAQIPELQKSQAAKEYDLLRKS-SEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQ 86
EE + + PE KS +E K+ S KE K PE E K E K P
Sbjct: 772 EEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEK-------EIPKKEEVKSPV 824
Query: 87 KPPE-PQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQGPANTQ 145
K E PQ++ EPP E ++APA P++ +++ + P P V E + PA +
Sbjct: 825 KEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEK 884
Query: 146 DATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLE 193
E K E +D + P+ +E A++E E P+E E
Sbjct: 885 PKESKVEAKKEEAEDKKKVPTPE-----KEAPAKVEVKEDAKPKEKTE 927
Score = 49.3 bits (116), Expect = 8e-06
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 16/217 (7%)
Query: 29 ENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKP 88
E + ++ E ++ +A +E + E +E + E P A EA +PE KE + P
Sbjct: 462 EETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAA-SPE-KEAKSP 519
Query: 89 PEPQDLLPWEPPAAWELQEAPA-----APESLAPPATRESQKPPMAHEIPTVLEGQGPAN 143
+ + P E + E +EA + +PE PA E++ PP A P E + PA
Sbjct: 520 VKEEAKSPAEAKSP-EKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKS-PEKEEAKSPAE 577
Query: 144 TQDATIAQEPKNSEPQDPPNIEKPQEA--PEYQETAAQLEFL-----ELPPPQEPLEPSN 196
+ A+ P E + P + P++A P +E + E E P E P
Sbjct: 578 VKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEK 637
Query: 197 AQEFLELSAAQESLEGLIVVETSAASEFPQAPIGLEA 233
A+ + A E + + E ++P+ EA
Sbjct: 638 AKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEA 674
Score = 48.5 bits (114), Expect = 1e-05
Identities = 47/181 (25%), Positives = 69/181 (38%), Gaps = 19/181 (10%)
Query: 34 QAQIPELQKSQAAKEYDLLRKS-SEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQ 92
+A+ PE KS +E K+ S KE K PE P EA+ + K P+K
Sbjct: 701 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLD 760
Query: 93 DLLPWEPPAAWELQEAPA--APESLAPPATRESQKPPMA------------HEIPTVLEG 138
P A E +PA PE P E + P A EIP E
Sbjct: 761 VKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEV 820
Query: 139 QGPA----NTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEP 194
+ P Q+ + + PK +E + P K +E + ++ A + P +E EP
Sbjct: 821 KSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEP 880
Query: 195 S 195
+
Sbjct: 881 A 881
Score = 43.5 bits (101), Expect = 4e-04
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 15/182 (8%)
Query: 26 LMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEP 85
L E+ A + +IP+ ++ ++ + + + + KEP K E PA KT E K+
Sbjct: 803 LKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPA---TPKTEEKKDS 859
Query: 86 QKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQK-----PPMAHEIPTVLEGQG 140
+K P+ P +P + + A P+ A +E + P E P +E +
Sbjct: 860 KKEEAPKKEAP-KPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKE 918
Query: 141 PANTQDAT--IAQEPKNSEPQDPPN-IEKPQEAPEYQETAAQLEFLELPPPQEPLEPSNA 197
A ++ T +EP +++ ++P EK + APE ++T E P ++P + A
Sbjct: 919 DAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTK---EEKAKKPEEKPKTEAKA 975
Query: 198 QE 199
+E
Sbjct: 976 KE 977
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 29/190 (15%)
Query: 12 LKLENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPP 71
+K+++E + V+ +E ++ Q E Q ++ E + EAKE + E
Sbjct: 436 IKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTE----EEEKEAKEEEGKEEE---- 487
Query: 72 AAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHE 131
E ++ +E K PPA E A+PE A +E K P +
Sbjct: 488 -GGEEEEAEGGEEETK----------SPPA-----EEAASPEKEAKSPVKEEAKSPAEAK 531
Query: 132 IPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQL---EFLELPPP 188
P E + PA + A+ P E + PP + P++ E ++ A++ E + P
Sbjct: 532 SPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEK--EEAKSPAEVKSPEKAKSPAK 589
Query: 189 QEPLEPSNAQ 198
+E P+ A+
Sbjct: 590 EEAKSPAEAK 599
Score = 41.2 bits (95), Expect = 0.002
Identities = 48/202 (23%), Positives = 76/202 (37%), Gaps = 20/202 (9%)
Query: 28 EENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQK 87
E + + + PE KS A +E + +EAK P+K P EA+ E K P K
Sbjct: 571 EAKSPAEVKSPEKAKSPAKEE---AKSPAEAKSPEKAKS----PVKEEAKSPAEAKSPVK 623
Query: 88 PPEPQDLLPWEPPAAWE-LQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQGPANTQD 146
P A +E +PE P E++ P A + P E + P
Sbjct: 624 EEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKA-KSPVKAEAKSPEK--- 679
Query: 147 ATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPSNAQEFLELSAA 206
A+ P +E + P + P +E A E + P +E P A+ ++ A
Sbjct: 680 ---AKSPVKAEAKSPEKAKSP-----VKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAK 731
Query: 207 QESLEGLIVVETSAASEFPQAP 228
V E + + E ++P
Sbjct: 732 TPEKAKSPVKEEAKSPEKAKSP 753
Score = 36.6 bits (83), Expect = 0.051
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 23/160 (14%)
Query: 28 EENAALQAQIPELQKS-----QAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEF 82
EE +A P++++ + KE + K EA++ +K+P EA E
Sbjct: 862 EEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEK-----EAPAKVEV 916
Query: 83 KEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRES--QKPPMAHEIPTVLEGQG 140
KE KP E ++ EP A + + A + A P +++ +K E P + +
Sbjct: 917 KEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKP---KTEA 973
Query: 141 PANTQDATIAQEP--------KNSEPQDPPNIEKPQEAPE 172
A D T+++EP + S D + + P++A E
Sbjct: 974 KAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATE 1013
Score = 36.2 bits (82), Expect = 0.067
Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 22/179 (12%)
Query: 34 QAQIPELQKSQAAKEYDLLRKS-----SEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKP 88
+A+ PE KS E K+ +EAK P+K + A + KE K
Sbjct: 659 EAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKS 718
Query: 89 PEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAH--EIPTVLEGQGP-ANTQ 145
PE A ++E PE P E++ P A E L+ + P A T
Sbjct: 719 PE---------KAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTP 769
Query: 146 DATIAQEPKNSEPQDPPN-----IEKPQEAPEYQETAAQLEFLELPPPQEPLEPSNAQE 199
A+ P + P+ + ++ P++A + A+ E+P +E P +E
Sbjct: 770 AKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEE 828
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 54.3 bits (129), Expect = 2e-07
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 37 IPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTP-----EFKEPQKPPEP 91
+PE+QK +E + S + P K+PE PA E P E P+ P P
Sbjct: 9261 VPEVQKEIVTEEKIHVAISKRVEPPPKVPELPEKPAPEEVAPVPIPKKVEPPAPKVPEVP 9320
Query: 92 QDLLPWE-------------PPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEG 138
+ +P E PP E+ + P E + P ++ + PP ++P V
Sbjct: 9321 KKPVPEEKKPVPVPKKEPAAPPKVPEVPKKPVPEEKIPVPVAKKKEAPPA--KVPEV--Q 9376
Query: 139 QGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEP 194
+G + TI + + S P P I K ++ PE ++ + E PPP+ P P
Sbjct: 9377 KGVVTEEKITIVTQREESPPPAVPEIPK-KKVPEERKPVPRKEEEVPPPPKVPALP 9431
Score = 43.9 bits (102), Expect = 3e-04
Identities = 51/216 (23%), Positives = 83/216 (38%), Gaps = 31/216 (14%)
Query: 36 QIPELQKSQAA-KEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDL 94
++PE+ K K+ L+ P K+PE P +K K+P+ PP
Sbjct: 10720 KVPEVPKEVVPEKKVPLVVPKKPEAPPAKVPEV--PKEVVPEKKVAVPKKPEVPPAKVPE 10777
Query: 95 LPWEPPAAWELQEAPAAP---ESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQ 151
+P +P L+E PA P + +PP + +A E E + P + +
Sbjct: 10778 VPKKPV----LEEKPAVPVPERAESPPPEVYEEPEEIAPEEEIAPEEEKPVPVAEEEEPE 10833
Query: 152 EPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPSNAQEFLELSA------ 205
P + P++P I ++ P ++ E PPP+EP EP E +L
Sbjct: 10834 VPPPAVPEEPKKIIPEKKVPVIKKP-------EAPPPKEP-EPEKVIEKPKLKPRPPPPP 10885
Query: 206 -------AQESLEGLIVVETSAASEFPQAPIGLEAT 234
+E + L + E PQ P +E T
Sbjct: 10886 PAPPKEDVKEKIFQLKAIPKKKVPEKPQVPEKVELT 10921
Score = 43.1 bits (100), Expect = 5e-04
Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 23/175 (13%)
Query: 35 AQIPELQKSQAAKEYDLLRKSSEAK-EPQKLPEHMNPPAAWEAQKTP--EFKEPQKPPE- 90
A++PE+ K +E +R E + P K+PE + P +K P K+P+ PP
Sbjct: 10467 AKVPEVPKKIVVEEK--VRVPEEPRVPPTKVPEVLPPKEVVPEKKVPVPPAKKPEAPPPK 10524
Query: 91 ---------PQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQGP 141
P+ +P PP + E P P A +K P A IP E P
Sbjct: 10525 VPEAPKEVVPEKKVPVPPP---KKPEVPPTKVPEVPKAAVPEKKVPEA--IPPKPESP-P 10578
Query: 142 ANTQDATIAQEPKNSEPQDPPNIEK--PQEAPEYQETAAQLEFLELPPPQEPLEP 194
+A P+ P PP + P + PE + + + +PPP++P P
Sbjct: 10579 PEVPEAPKEVVPEKKVPAAPPKKPEVTPVKVPEAPKEVVPEKKVPVPPPKKPEVP 10633
Score = 42.4 bits (98), Expect = 0.001
Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 17/222 (7%)
Query: 15 ENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPE-------- 66
E + + +V ++ + A +PE++K K+ + +K E P K+PE
Sbjct: 10165 EEFVPEEEVLPEVKPKVPVPAPVPEIKKKVTEKKVVIPKK--EEAPPAKVPEVPKKVEEK 10222
Query: 67 HMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEA--PAAPESLAPPATRESQ 124
+ P E +EP++ P ++ +P EPP+ E++E P PE +
Sbjct: 10223 RIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPRVPEVIKKAVPEAPT 10282
Query: 125 KPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLE 184
P E P + + + + K + P P E P++ PE + + E +
Sbjct: 10283 PVPKKVEAPPAKVSK-KIPEEKVPVPVQKKEAPPAKVP--EVPKKVPEKKVLVPKKEAVP 10339
Query: 185 LPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFPQ 226
+ LE + F + +E LE L VVE + E P+
Sbjct: 10340 PAKGRTVLEEKVSVAFRQEVVVKERLE-LEVVE-AEVEEIPE 10379
Score = 40.8 bits (94), Expect = 0.003
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
Query: 37 IPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEF-KEP---QKPPEPQ 92
+P+ +++ AK ++ +K E K P +P+ PP A K PE K+P +K P P
Sbjct: 9967 VPKKKEAPPAKVPEVPKKPEE-KVPVLIPKKEKPPPA----KVPEVPKKPVPEEKVPVPV 10021
Query: 93 DLLPWEPPA-AWELQEAPAAPESLAPPATRESQKPP-MAHEIPTVL--EGQGPANTQDAT 148
PPA E+ + P + + PA ++ + PP E+P L E + P
Sbjct: 10022 PKKVEAPPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKV 10081
Query: 149 IAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFL---ELPPPQEPLEPSNAQ 198
A PK + ++P + P P+ +E + E + E+ P +E + P +
Sbjct: 10082 EAPPPKVPKKREP--VPVPVALPQEEEVLFEEEIVPEEEVLPEEEEVLPEEEE 10132
Score = 39.3 bits (90), Expect = 0.008
Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 10/172 (5%)
Query: 28 EENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQK 87
++ A A++PE+QK +E + E P +PE E + P +E
Sbjct: 9363 KKKEAPPAKVPEVQKGVVTEEKITIVTQREESPPPAVPEIPKKKVPEERKPVPRKEEEVP 9422
Query: 88 PPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLE--------GQ 139
PP LP + P E P APP E K + E V E +
Sbjct: 9423 PPPKVPALP-KKPVPEEKVAVPVPVAKKAPPPRAEVSKKTVVEEKRFVAEEKLSFAVPQR 9481
Query: 140 GPANTQDATIAQEPKNSEPQDPPNIE-KPQEAPEYQETAAQLEFLELPPPQE 190
+ + +E SE ++ +I +E E +E A E+ + P+E
Sbjct: 9482 VEVTRHEVSAEEEWSYSEEEEGVSISVYREEEREEEEEAEVTEYEVMEEPEE 9533
Score = 38.9 bits (89), Expect = 0.010
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 61 PQK-LPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLP------WEPPAAW--ELQEAPAA 111
P+K +PE P + ++ P K P+ P +P++ +P +PP A E+ + P
Sbjct: 9954 PRKPVPEEKKPVPVPKKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVP 10013
Query: 112 PESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAP 171
E + P ++ + PP ++P V + P A + + P P + K + P
Sbjct: 10014 EEKVPVPVPKKVEAPPA--KVPEVPKKPVPEKKVPVP-APKKVEAPPAKVPEVPK-KLIP 10069
Query: 172 EYQETAAQLEFLELPPPQEP 191
E ++ + +E PPP+ P
Sbjct: 10070 EEKKPTPVPKKVEAPPPKVP 10089
Score = 38.5 bits (88), Expect = 0.013
Identities = 50/200 (25%), Positives = 76/200 (38%), Gaps = 16/200 (8%)
Query: 13 KLENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPA 72
++E E R +V ++E A + ++ E K+ + K P K+ PPA
Sbjct: 10408 RVEEEHRVEKVHRVIEVFEAEEVEVFEKPKAPPKGPEISEKIIPPKKPPTKVVPRKEPPA 10467
Query: 73 AW-EAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHE 131
E K +E + PE + P + P +E + PPA + PP E
Sbjct: 10468 KVPEVPKKIVVEEKVRVPEEPRVPPTKVPEVLPPKEVVPEKKVPVPPAKKPEAPPPKVPE 10527
Query: 132 IP--TVLEGQGPANTQDATIAQEPKNSEPQDPPN--IEKPQEA-PEYQETAAQLEFLELP 186
P V E + P P +P+ PP E P+ A PE + A E P
Sbjct: 10528 APKEVVPEKKVPV----------PPPKKPEVPPTKVPEVPKAAVPEKKVPEAIPPKPESP 10577
Query: 187 PPQEPLEPSNAQEFLELSAA 206
PP+ P P ++ AA
Sbjct: 10578 PPEVPEAPKEVVPEKKVPAA 10597
Score = 38.1 bits (87), Expect = 0.018
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 17/193 (8%)
Query: 3 EDLAASYIVLKLENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKE-P 61
+++A V ++ E+ +V + E ++ + E ++ +E + + + P
Sbjct: 9888 KEVAPPVRVPEVPKELEPEEVAFEEEVVTHVEEYLVEEEEEYIHEEEEFITEEEVVPVIP 9947
Query: 62 QKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATR 121
K+PE P PE K+P P+ ++ PPA ++ E P PE P
Sbjct: 9948 VKVPEVPRKP-------VPEEKKPVPVPKKKE----APPA--KVPEVPKKPEEKVPVLIP 9994
Query: 122 ESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLE 181
+ +KPP A ++P V + P + ++ + + P P + K + PE + +
Sbjct: 9995 KKEKPPPA-KVPEVPKKPVPEEKVPVPVPKKVE-APPAKVPEVPK-KPVPEKKVPVPAPK 10051
Query: 182 FLELPPPQEPLEP 194
+E PP + P P
Sbjct: 10052 KVEAPPAKVPEVP 10064
Score = 38.1 bits (87), Expect = 0.018
Identities = 41/147 (27%), Positives = 56/147 (38%), Gaps = 22/147 (14%)
Query: 61 PQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAP---ESLAP 117
P K+PE P AA +K PE P KP P +P P ++ PAAP + P
Sbjct: 10550 PTKVPEV--PKAAVPEKKVPE-AIPPKPESPPPEVPEAPKEVVPEKKVPAAPPKKPEVTP 10606
Query: 118 PATRESQK-----------PPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPN--I 164
E+ K PP E+P + P E +P+ PP
Sbjct: 10607 VKVPEAPKEVVPEKKVPVPPPKKPEVPPTKVPEVPKVAVPEKKVPEAIPPKPESPPPEVF 10666
Query: 165 EKPQEAPEYQETAAQLEFLELPPPQEP 191
E+P+E + A E +E P P P
Sbjct: 10667 EEPEEVALEEPPA---EVVEEPEPAAP 10690
Score = 38.1 bits (87), Expect = 0.018
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 28/141 (19%)
Query: 61 PQKLPEHMNPPAAWEAQKTPEF--KEPQKPP-----EPQDLLPWEPPAAWELQEAPAAPE 113
P K+PE P A +K PE +P+ PP EP+++ EPPA E PE
Sbjct: 10634 PTKVPEV--PKVAVPEKKVPEAIPPKPESPPPEVFEEPEEVALEEPPA-----EVVEEPE 10686
Query: 114 SLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEY 173
APP K P+ P A +A++P+ P P + K + PE
Sbjct: 10687 PAAPPQVTVPPKKPV------------PEKKAPAVVAKKPE-LPPVKVPEVPK-EVVPEK 10732
Query: 174 QETAAQLEFLELPPPQEPLEP 194
+ + E PP + P P
Sbjct: 10733 KVPLVVPKKPEAPPAKVPEVP 10753
Score = 36.2 bits (82), Expect = 0.067
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 15/197 (7%)
Query: 18 IRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLR-KSSEAKEPQKLPEHMNPPAAWEA 76
I++ + E L+ + +Q+ + +EY+ K E EP + + E
Sbjct: 9717 IKEVTIMEEKERAYTLEEEAVSVQREEEYEEYEEYDYKEFEEYEPTEEYDQYEEYEEREY 9776
Query: 77 QKTPEFKE----PQKP----PEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPP- 127
++ E +E P+KP P P++ +P +P A A PE P + KPP
Sbjct: 9777 ERYEEHEEYITEPEKPIPVKPVPEEPVPTKPKAPPAKVLKKAVPEEKVPVPIPKKLKPPP 9836
Query: 128 --MAHEIPTVLEG--QGPANTQDATIAQEPKNSEPQDPPNIEKPQEAP-EYQETAAQLEF 182
+ E V E + ++ EP P P + ++ P +E A +
Sbjct: 9837 PKVPEEPKKVFEEKIRISITKREKEQVTEPAAKVPMKPKRVVAEEKVPVPRKEVAPPVRV 9896
Query: 183 LELPPPQEPLEPSNAQE 199
E+P EP E + +E
Sbjct: 9897 PEVPKELEPEEVAFEEE 9913
Score = 35.8 bits (81), Expect = 0.087
Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 14/171 (8%)
Query: 26 LMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEP 85
++EE A+ +PE +S + Y+ A E + PE P E ++ PE P
Sbjct: 10783 VLEEKPAVP--VPERAESPPPEVYE--EPEEIAPEEEIAPEEEKPVPVAEEEE-PEVPPP 10837
Query: 86 QKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQGPANTQ 145
P EP+ ++P + + EAP E P + +KP + P + +
Sbjct: 10838 AVPEEPKKIIPEKKVPVIKKPEAPPPKE---PEPEKVIEKPKLKPRPPPPPPAPPKEDVK 10894
Query: 146 DATIAQE--PKNSEPQDPPNIEK----PQEAPEYQETAAQLEFLELPPPQE 190
+ + PK P+ P EK P + P ++ +L P P+E
Sbjct: 10895 EKIFQLKAIPKKKVPEKPQVPEKVELTPLKVPGGEKKVRKLLPERKPEPKE 10945
Score = 33.9 bits (76), Expect = 0.33
Identities = 43/211 (20%), Positives = 80/211 (37%), Gaps = 44/211 (20%)
Query: 15 ENEIRQAQVQWLMEENA--------ALQAQIPELQKSQAAKEYDLLRKSSE---AKEPQK 63
E E+ + ++++EE A A++ E Q+ + + + K E AK P+
Sbjct: 9524 EYEVMEEPEEYVVEEKLHIISKRVEAEPAEVTERQEKKIVLKPKIPAKIEEPPPAKVPEA 9583
Query: 64 ----LPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPA 119
+PE P + +K P K P++P +P PE PP
Sbjct: 9584 PKKIVPEKKVPAPVPKKEKVPPPKVPEEPKKP-------------------VPEKKVPPK 9624
Query: 120 TRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQ 179
+ ++P +P + + TQ+ + E PP P+E + +
Sbjct: 9625 VIKMEEP-----LPAKVTERHMQITQEEKVLVAVTKKEA--PPKARVPEEP---KRAVPE 9674
Query: 180 LEFLELPPPQEPLEPSNAQEFLELSAAQESL 210
+ L+L P +E P+ EF + +E +
Sbjct: 9675 EKVLKLKPKREEEPPAKVTEFRKRVVKEEKV 9705
Score = 33.5 bits (75), Expect = 0.43
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 40/223 (17%)
Query: 35 AQIPELQKSQAAKEYDL--LRKSSEAKEPQKLPEHMNP---PAAWEAQKTPEFKEPQKP- 88
A++PE+ K +E + K EA P K+P+ P P A ++ F+E P
Sbjct: 10058 AKVPEVPKKLIPEEKKPTPVPKKVEAPPP-KVPKKREPVPVPVALPQEEEVLFEEEIVPE 10116
Query: 89 -----------PEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLE 137
PE +++LP E E +E P PE E + PP +P E
Sbjct: 10117 EEVLPEEEEVLPEEEEVLPEEEEVLPEEEEIP--PE--------EEEVPPEEEYVP---E 10163
Query: 138 GQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPSNA 197
+ ++ +PK P P I+K + E + + E E PP + P P
Sbjct: 10164 EEEFVPEEEVLPEVKPKVPVPAPVPEIKK--KVTEKKVVIPKKE--EAPPAKVPEVPKKV 10219
Query: 198 QEFLELSAAQESLEGLIVVETS-----AASEFPQAPIGLEATD 235
+E + +E + + V E + E P+ P +E +
Sbjct: 10220 EEKRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVE 10262
Score = 32.7 bits (73), Expect = 0.74
Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 13/159 (8%)
Query: 81 EFKEPQKPPEPQDLLPWEPPAAWELQE-----APAAPESLAPPATRESQKPPMAHEIPTV 135
E +E ++ E + E P + ++E + A R+ +K + +IP
Sbjct: 9512 EEREEEEEAEVTEYEVMEEPEEYVVEEKLHIISKRVEAEPAEVTERQEKKIVLKPKIPAK 9571
Query: 136 LEGQGPANTQDATIAQEPKNSEPQDPPNIEK--PQEAPEYQETAAQLEFLELPPP----Q 189
+E PA +A P+ P P EK P + PE E + ++PP +
Sbjct: 9572 IEEPPPAKVPEAPKKIVPEKKVPAPVPKKEKVPPPKVPE--EPKKPVPEKKVPPKVIKME 9629
Query: 190 EPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFPQAP 228
EPL + ++++ ++ L + E + P+ P
Sbjct: 9630 EPLPAKVTERHMQITQEEKVLVAVTKKEAPPKARVPEEP 9668
Score = 32.3 bits (72), Expect = 0.96
Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 34/168 (20%)
Query: 51 LLRKSSEAKEPQKLPEHMN-----------PPAAWEAQKTPEF-KEPQKPPEP---QDLL 95
+LRK E +EP+ P+ + PP E + P K +K PEP ++
Sbjct: 10952 VLRKRPEEEEPKVEPKKLEKVKKPAVPEPPPPKPVEEVEVPTVTKRERKIPEPTKVPEIK 11011
Query: 96 PWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEG---QGPANTQDATIAQE 152
P P A E + P A P E + P+A + + G + A ++A +
Sbjct: 11012 PAIPLPAPEPKPKPEAEVKTIKPPPVEPEPTPIAAPVTVPVVGKKAEAKAPKEEAAKPKG 11071
Query: 153 PKNSEPQDPPN---------------IEKPQEAP-EYQETAAQLEFLE 184
P P+ P+ + P EAP YQ A L+F++
Sbjct: 11072 PIKGVPKKTPSPIEAERRKLRPGSGGEKPPDEAPFTYQLKAVPLKFVK 11119
Score = 31.6 bits (70), Expect = 1.6
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 149 IAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPSNA-QEFLELSAAQ 207
+ +EP ++P+ PP + PE + + L+ PPP+ P EP +E + +S +
Sbjct: 9798 VPEEPVPTKPKAPPAKVLKKAVPEEKVPVPIPKKLKPPPPKVPEEPKKVFEEKIRISITK 9857
Query: 208 ESLEGLIVVETSAASEFPQAP 228
E + T A++ P P
Sbjct: 9858 REKEQV----TEPAAKVPMKP 9874
Score = 30.4 bits (67), Expect = 3.7
Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 18/151 (11%)
Query: 51 LLRKSSEAKEPQKLPEHMNPPAAWEAQK--------TPEFKEPQKPPEPQDLLPWEPPAA 102
LL E K P K E +A+K TP + +KPP P L+P + P
Sbjct: 8968 LLPTPEEKKPPPKRIEVTKKAVKKDAKKVVAKPKEMTPREEIVKKPPPPTTLIPAKAPEI 9027
Query: 103 WELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPP 162
++ + + +E QK E V E + + + + EP D
Sbjct: 9028 IDVSSKAEEVKIMTITRKKEVQK-----EKEAVYEKKQAVHKEKRVFIE--SFEEPYDEL 9080
Query: 163 NIE---KPQEAPEYQETAAQLEFLELPPPQE 190
+E +P E P Y+E E +++ +E
Sbjct: 9081 EVEPYTEPFEQPYYEEPDEDYEEIKVEAKKE 9111
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 53.1 bits (126), Expect = 5e-07
Identities = 48/182 (26%), Positives = 68/182 (37%), Gaps = 26/182 (14%)
Query: 56 SEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESL 115
S+ + P + PA + PQ PP PQ L LQE+P +
Sbjct: 675 SKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTTLT-------PLQESPVISKDQ 727
Query: 116 APPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQE 175
+PP + PP H P + P +A A E QDP P APE Q+
Sbjct: 728 SPPPS----PPPSYHPPPP--PTKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQD 781
Query: 176 TAAQLEFLELPPPQ---------EPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFPQ 226
L + PPP+ EP PS + E + AA S + ++ + + P
Sbjct: 782 ----LSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQPPGSPDPPP 837
Query: 227 AP 228
AP
Sbjct: 838 AP 839
Score = 33.1 bits (74), Expect = 0.57
Identities = 33/140 (23%), Positives = 50/140 (35%), Gaps = 13/140 (9%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPP 118
+E + + +PP + P P PP + + E P+A E E P + PP
Sbjct: 718 QESPVISKDQSPPPS-----PPPSYHPPPPPTKKPEVVVEAPSASETAEEPLQDPNWPPP 772
Query: 119 ATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAA 178
PP A E + P + P+ + P P + A TA
Sbjct: 773 -------PPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATAL 825
Query: 179 QLEFLELP-PPQEPLEPSNA 197
Q++ P PP P P+ A
Sbjct: 826 QIQPPGSPDPPPAPPAPAPA 845
Score = 31.6 bits (70), Expect = 1.6
Identities = 53/217 (24%), Positives = 82/217 (37%), Gaps = 34/217 (15%)
Query: 61 PQKLPEHM-NPPAAWEAQKTPEFKEPQKPP------EPQDLLPWEPPAAWELQEAPAAPE 113
P K PE + P+A E + P ++P PP E QDL + P E + A+PE
Sbjct: 743 PTKKPEVVVEAPSASETAEEP-LQDPNWPPPPPPAPEEQDLSMADFPPPEEAFFSVASPE 801
Query: 114 SLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEY 173
P + E P A++ AT Q P PP P A
Sbjct: 802 PAGPSGSPELVSSP-------------AASSSSATALQIQPPGSPDPPPAPPAPAPASSA 848
Query: 174 QETAAQLEFLELPPPQEPLEPSNA----QEFLELSAAQESLEGLIVVET-SAASEFPQAP 228
A+L P +EP+ S +E + SL ++ + + A P
Sbjct: 849 PGHVAKL------PQKEPVGCSKGGGPPREDVGAPLVTPSLLQMVRLRSVGAPGGAPTPA 902
Query: 229 IGLEATDFPLQYTLTFSGDSQKLPEFLVQLYSYMRVR 265
+G A PL+ L SG + +P L++ +R++
Sbjct: 903 LGPSAPQKPLRRAL--SGRASPVPAPSSGLHAAVRLK 937
>gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens]
Length = 1388
Score = 52.0 bits (123), Expect = 1e-06
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 263 RVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLDIQSPLLEQCESFIPVLQDTFDNPENM 322
+++G L +E ++F+ + G A WF L +++ PL + +SF+ Q +D+ +
Sbjct: 1175 QMKGFLDDSER--MAFLVSLHLGAAERWFILQMEVGEPLSHENKSFLRRSQGIYDSLSEI 1232
Query: 323 KDANQCIHQLCQGEGHV---ATHFHLIAQELNWDESTLWIQFQEGLASSIQDELSH--TS 377
+ + QG+ V AT F L+A+ L+W ++ L +F EGL+ ++ ++
Sbjct: 1233 DILSAVLCHPKQGQKSVRQYATDFLLLARHLSWSDAILRTRFLEGLSEAVTTKMGRIFLK 1292
Query: 378 PATNLSDLI-----TQCISLEEKPDP 398
A +L +LI T+C EEK P
Sbjct: 1293 VAGSLKELIDRSLYTECQLAEEKDSP 1318
>gi|118200335 family with sequence similarity 127, member A [Homo
sapiens]
Length = 113
Score = 51.2 bits (121), Expect = 2e-06
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 237 PLQYTLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLD 296
P+ + TF GD+ +LPEF+VQ SYM V + + ++A V+F+ +G A W +
Sbjct: 26 PIPFPETFDGDTDRLPEFIVQTGSYMFVDENTFSSDALKVTFLITRLTGPALQWVIPYIK 85
Query: 297 IQSPLLEQCESFIPVLQDTF 316
+SPLL F+ ++ F
Sbjct: 86 KESPLLNDYRGFLAEMKRVF 105
>gi|118200337 family with sequence similarity 127, member C [Homo
sapiens]
Length = 113
Score = 51.2 bits (121), Expect = 2e-06
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 237 PLQYTLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLD 296
P+ + TF GD+ +LPEF+VQ SYM V + + +A V+F+ +G A W +
Sbjct: 26 PIPFPETFDGDTDRLPEFIVQTSSYMFVDENTFSNDALKVTFLITRLTGPALQWVIPYIK 85
Query: 297 IQSPLLEQCESFIPVLQDTF 316
+SPLL F+ ++ F
Sbjct: 86 KESPLLSDYRGFLAEMKRVF 105
>gi|239757911 PREDICTED: similar to Family with sequence similarity
127, member B [Homo sapiens]
Length = 113
Score = 50.8 bits (120), Expect = 3e-06
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 237 PLQYTLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLD 296
P+ + TF GD+ +LPEF+VQ SYM V + + +A V+F+ +G A W +
Sbjct: 26 PIPFPETFDGDTDRLPEFIVQTCSYMFVDENTFSNDALKVTFLITRLTGPALQWVIPYIR 85
Query: 297 IQSPLLEQCESFIPVLQDTF 316
+SPLL F+ ++ F
Sbjct: 86 KESPLLNDYRGFLAEMKRVF 105
>gi|239745855 PREDICTED: hypothetical protein XP_002343606 [Homo
sapiens]
Length = 870
Score = 50.8 bits (120), Expect = 3e-06
Identities = 57/218 (26%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 20 QAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKL---PEHMNPPAAWEA 76
Q+Q Q L E ++ P + + D SE P + PE NP +
Sbjct: 174 QSQKQTLQNEYSSTDTPYPSSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDI 233
Query: 77 QKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAP-----ESLAPPATRESQKPP---- 127
Q + + + P + LL EP + QEAPA P ESL P S +PP
Sbjct: 234 QSSS--LQQEAPAQLPQLLEEEPSSMQ--QEAPALPPESSMESLTLPNHEVSVQPPGEDQ 289
Query: 128 MAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+ +P + PA+ + TI EP N E P + PE E +A + + P
Sbjct: 290 AYYHLPNITVK--PADVE-VTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEP 346
Query: 188 P-------------QEPLEPSNAQEFLELSAAQESLEG 212
P Q+P++PS + +E S Q+ G
Sbjct: 347 PVSPMEHELSISEQQQPVQPSESSREVESSLTQQETPG 384
Score = 44.7 bits (104), Expect = 2e-04
Identities = 54/215 (25%), Positives = 86/215 (40%), Gaps = 33/215 (15%)
Query: 27 MEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEH----MNPPAAWEAQKTPEF 82
ME ++ Q +Q S++++E + ++ + P + PEH ++PP +
Sbjct: 351 MEHELSISEQQQPVQPSESSREVE--SSLTQQETPGQPPEHHEVTVSPPGHHQTHHLDSP 408
Query: 83 KEPQKPPEPQDLLPWEPPA----AWELQEAPA----APESLAPPATRESQKPPMAHEIPT 134
KPP+ Q + EP A + QEA A + + PPA + PP+ +P
Sbjct: 409 SVSVKPPDVQLTIAAEPSAEVGTSLVHQEATARLSGSGNDVEPPAIQHG-GPPL---LPE 464
Query: 135 VLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEP 194
E GP Q T Q P +P N E P +P QE AA+ PQ E
Sbjct: 465 SSEEAGPLAVQQETSFQSP------EPINNENP--SPTQQEAAAE-------HPQTAEEG 509
Query: 195 SNAQEFLELSAAQESLEGLIVVETSAASEFPQAPI 229
++ E A ++V + S QA +
Sbjct: 510 ESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATV 544
Score = 31.2 bits (69), Expect = 2.1
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 21/146 (14%)
Query: 79 TPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRE--------SQKPPMAH 130
+P+ + P P + L +P W L E L+ P +++ S P
Sbjct: 138 SPQERLPVSPKK----LKKDPAQRWSLAEIIGIARQLSTPQSQKQTLQNEYSSTDTPYPS 193
Query: 131 EIPTVLE---GQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+P L + P ++ +Q E Q+P +E Q + QE AQL P
Sbjct: 194 SLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQL------P 247
Query: 188 PQEPLEPSNAQEFLELSAAQESLEGL 213
EPS+ Q+ + S+E L
Sbjct: 248 QLLEEEPSSMQQEAPALPPESSMESL 273
>gi|118200333 family with sequence similarity 127, member B isoform
1 [Homo sapiens]
Length = 113
Score = 50.8 bits (120), Expect = 3e-06
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 237 PLQYTLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLD 296
P+ + TF GD+ +LPEF+VQ SYM V + + +A V+F+ +G A W +
Sbjct: 26 PIPFPETFDGDTDRLPEFIVQTSSYMFVDENTFSNDALKVTFLITRLTGPALQWVIPYIR 85
Query: 297 IQSPLLEQCESFIPVLQDTF 316
+SPLL F+ ++ F
Sbjct: 86 KESPLLNDYRGFLAEMKRVF 105
>gi|75677612 leucine rich repeat containing 37, member A3 [Homo
sapiens]
Length = 1634
Score = 50.1 bits (118), Expect = 4e-06
Identities = 57/218 (26%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 20 QAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKL---PEHMNPPAAWEA 76
Q+Q Q L E ++ P + + D SE P + PE NP +
Sbjct: 174 QSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDI 233
Query: 77 QKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAP-----ESLAPPATRESQKPP---- 127
Q + + + P + LL EP + QEAPA P ESL P S +PP
Sbjct: 234 QSSS--LQQEAPAQLPQLLEEEPSSMQ--QEAPALPPESSMESLTLPNHEVSVQPPGEDQ 289
Query: 128 MAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+ +P + PA+ + TI EP N E P + PE E +A + + P
Sbjct: 290 AYYHLPNITVK--PADVE-VTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEP 346
Query: 188 P-------------QEPLEPSNAQEFLELSAAQESLEG 212
P Q+P++PS + +E S Q+ G
Sbjct: 347 PVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPG 384
Score = 42.4 bits (98), Expect = 0.001
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 27 MEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEH----MNPPAAWEAQKTPEF 82
ME ++ Q +Q S++++E + ++ + P + PEH ++PP +
Sbjct: 351 MEHELSISEQQQPVQPSESSREVE--SSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASP 408
Query: 83 KEPQKPPEPQDLLPWEPPA----AWELQEAPA----APESLAPPATRESQKPPMAHEIPT 134
KPP+ Q + EP A + QEA + + PPA + PP+ +P
Sbjct: 409 SVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGG-PPL---LPE 464
Query: 135 VLEGQGPANTQDATIAQ--EPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPL 192
E GP Q T Q EP N+E P E E P+ E + P Q P
Sbjct: 465 SSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPE 524
Query: 193 EPS 195
P+
Sbjct: 525 FPN 527
Score = 38.5 bits (88), Expect = 0.013
Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 30/231 (12%)
Query: 2 VEDLAASYIVLKLENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEP 61
+ED+ +S L+ E Q L EE +++Q + P L + + L + P
Sbjct: 230 LEDIQSS----SLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPP 285
Query: 62 QK------LPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESL 115
+ LP PA E T E + + Q P + P E P+A +
Sbjct: 286 GEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVE----PSATQQE 341
Query: 116 APPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQE 175
AP E PPM HE+ ++ E Q P +++ E P E P + PE+ E
Sbjct: 342 API---EPPVPPMEHEL-SISEQQQPVQPSESSREVE------SSPTQQETPGQPPEHHE 391
Query: 176 TA----AQLEFLELPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAAS 222
+ L P ++P + Q L ++A + G +V A +
Sbjct: 392 VTVSPPGHHQTHHLASPSVSVKPPDVQ--LTIAAEPSAEVGTSLVHQEATT 440
Score = 30.0 bits (66), Expect = 4.8
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 21/146 (14%)
Query: 79 TPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRE--------SQKPPMAH 130
+P+ + P P + L +P W L E L+ P +++ S P
Sbjct: 138 SPQERLPVSPKK----LKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPG 193
Query: 131 EIPTVLE---GQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+P L + P ++ +Q E Q+P +E Q + QE AQL P
Sbjct: 194 SLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQL------P 247
Query: 188 PQEPLEPSNAQEFLELSAAQESLEGL 213
EPS+ Q+ + S+E L
Sbjct: 248 QLLEEEPSSMQQEAPALPPESSMESL 273
Score = 29.6 bits (65), Expect = 6.3
Identities = 42/183 (22%), Positives = 60/183 (32%), Gaps = 37/183 (20%)
Query: 71 PAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAP---------ESLAPPATR 121
P W P PPEP W ++ +E+P AP + L P A+
Sbjct: 39 PLEWVKDPLQLTSNPLGPPEP-----WSSHSSHFPRESPHAPTLPADPWDFDHLGPSASS 93
Query: 122 ESQKPPM---------------AHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEK 166
E PP A E+P E Q A+ QD P+ P P ++K
Sbjct: 94 EMPAPPQESTENLVPFLDTWDSAGELPLEPE-QFLASQQDLKDKLSPQERLPVSPKKLKK 152
Query: 167 -PQEAPEYQETAAQLEFLELPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFP 225
P + E + L P Q+ + E S+ G + E S+ P
Sbjct: 153 DPAQRWSLAEIIGIIHQLSTPQSQKQTLQN------EYSSTDTPYPGSLPPELRVKSDEP 206
Query: 226 QAP 228
P
Sbjct: 207 PGP 209
>gi|239740955 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 1 [Homo sapiens]
Length = 1635
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/218 (26%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 20 QAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKL---PEHMNPPAAWEA 76
Q+Q Q L E ++ P + + D SE P + PE NP +
Sbjct: 174 QSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDI 233
Query: 77 QKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAP-----ESLAPPATRESQKPP---- 127
Q + + + P + LL EP + QEAPA P ESL P S +PP
Sbjct: 234 QSSS--LQQEAPAQLPQLLEEEPSSMQ--QEAPALPPESSMESLTLPNHEVSVQPPGEDQ 289
Query: 128 MAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+ +P + PA+ + TI EP N E P + PE E +A + + P
Sbjct: 290 AYYHLPNITVK--PADVE-VTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEP 346
Query: 188 P-------------QEPLEPSNAQEFLELSAAQESLEG 212
P Q+P++PS + +E S Q+ G
Sbjct: 347 PVPPMEHELSISEQQQPVQPSESPREVESSPTQQETPG 384
Score = 41.6 bits (96), Expect = 0.002
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 20/183 (10%)
Query: 27 MEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEH----MNPPAAWEAQKTPEF 82
ME ++ Q +Q S++ +E + ++ + P + PEH ++PP +
Sbjct: 351 MEHELSISEQQQPVQPSESPREVE--SSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASP 408
Query: 83 KEPQKPPEPQDLLPWEPPA----AWELQEAPA----APESLAPPATRESQKPPMAHEIPT 134
KPP+ Q + EP A + QEA + + PPA + PP+ +P
Sbjct: 409 SVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGG-PPL---LPE 464
Query: 135 VLEGQGPANTQDATIAQ--EPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPL 192
E GP Q T Q EP N+E P E E P+ E + P Q P
Sbjct: 465 SSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPE 524
Query: 193 EPS 195
P+
Sbjct: 525 FPN 527
Score = 30.0 bits (66), Expect = 4.8
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 21/146 (14%)
Query: 79 TPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRE--------SQKPPMAH 130
+P+ + P P + L +P W L E L+ P +++ S P
Sbjct: 138 SPQERLPVSPKK----LKKDPAQRWSLAEIIGIIRQLSTPQSQKQTLQNEYSSTDTPYPG 193
Query: 131 EIPTVLE---GQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+P L + P ++ +Q E Q+P +E Q + QE AQL P
Sbjct: 194 SLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQL------P 247
Query: 188 PQEPLEPSNAQEFLELSAAQESLEGL 213
EPS+ Q+ + S+E L
Sbjct: 248 QLLEEEPSSMQQEAPALPPESSMESL 273
Score = 29.6 bits (65), Expect = 6.3
Identities = 42/183 (22%), Positives = 60/183 (32%), Gaps = 37/183 (20%)
Query: 71 PAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAP---------ESLAPPATR 121
P W P PPEP W ++ +E+P AP + L P A+
Sbjct: 39 PLEWVKDPLQLTSNPLGPPEP-----WSSHSSHFPRESPHAPTLPADPWDFDHLGPSASS 93
Query: 122 ESQKPPM---------------AHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEK 166
E PP A E+P E Q A+ QD P+ P P ++K
Sbjct: 94 EMPAPPQESTENLVPFLDTWDSAGELPLEPE-QFLASQQDLKDKLSPQERLPVSPKKLKK 152
Query: 167 -PQEAPEYQETAAQLEFLELPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFP 225
P + E + L P Q+ + E S+ G + E S+ P
Sbjct: 153 DPAQRWSLAEIIGIIRQLSTPQSQKQTLQN------EYSSTDTPYPGSLPPELRVKSDEP 206
Query: 226 QAP 228
P
Sbjct: 207 PGP 209
>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 2 [Homo sapiens]
Length = 1700
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/218 (26%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 20 QAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKL---PEHMNPPAAWEA 76
Q+Q Q L E ++ P + + D SE P + PE NP +
Sbjct: 174 QSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDI 233
Query: 77 QKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAP-----ESLAPPATRESQKPP---- 127
Q + + + P + LL EP + QEAPA P ESL P S +PP
Sbjct: 234 QSSS--LQQEAPAQLPQLLEEEPSSMQ--QEAPALPPESSMESLTLPNHEVSVQPPGEDQ 289
Query: 128 MAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+ +P + PA+ + TI EP N E P + PE E +A + + P
Sbjct: 290 AYYHLPNITVK--PADVE-VTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEP 346
Query: 188 P-------------QEPLEPSNAQEFLELSAAQESLEG 212
P Q+P++PS + +E S Q+ G
Sbjct: 347 PVPPMEHELSISEQQQPVQPSESPREVESSPTQQETPG 384
Score = 41.6 bits (96), Expect = 0.002
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 20/183 (10%)
Query: 27 MEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEH----MNPPAAWEAQKTPEF 82
ME ++ Q +Q S++ +E + ++ + P + PEH ++PP +
Sbjct: 351 MEHELSISEQQQPVQPSESPREVE--SSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASP 408
Query: 83 KEPQKPPEPQDLLPWEPPA----AWELQEAPA----APESLAPPATRESQKPPMAHEIPT 134
KPP+ Q + EP A + QEA + + PPA + PP+ +P
Sbjct: 409 SVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGG-PPL---LPE 464
Query: 135 VLEGQGPANTQDATIAQ--EPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPL 192
E GP Q T Q EP N+E P E E P+ E + P Q P
Sbjct: 465 SSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPE 524
Query: 193 EPS 195
P+
Sbjct: 525 FPN 527
Score = 30.0 bits (66), Expect = 4.8
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 21/146 (14%)
Query: 79 TPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRE--------SQKPPMAH 130
+P+ + P P + L +P W L E L+ P +++ S P
Sbjct: 138 SPQERLPVSPKK----LKKDPAQRWSLAEIIGIIRQLSTPQSQKQTLQNEYSSTDTPYPG 193
Query: 131 EIPTVLE---GQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+P L + P ++ +Q E Q+P +E Q + QE AQL P
Sbjct: 194 SLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQL------P 247
Query: 188 PQEPLEPSNAQEFLELSAAQESLEGL 213
EPS+ Q+ + S+E L
Sbjct: 248 QLLEEEPSSMQQEAPALPPESSMESL 273
Score = 29.6 bits (65), Expect = 6.3
Identities = 42/183 (22%), Positives = 60/183 (32%), Gaps = 37/183 (20%)
Query: 71 PAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAP---------ESLAPPATR 121
P W P PPEP W ++ +E+P AP + L P A+
Sbjct: 39 PLEWVKDPLQLTSNPLGPPEP-----WSSHSSHFPRESPHAPTLPADPWDFDHLGPSASS 93
Query: 122 ESQKPPM---------------AHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEK 166
E PP A E+P E Q A+ QD P+ P P ++K
Sbjct: 94 EMPAPPQESTENLVPFLDTWDSAGELPLEPE-QFLASQQDLKDKLSPQERLPVSPKKLKK 152
Query: 167 -PQEAPEYQETAAQLEFLELPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFP 225
P + E + L P Q+ + E S+ G + E S+ P
Sbjct: 153 DPAQRWSLAEIIGIIRQLSTPQSQKQTLQN------EYSSTDTPYPGSLPPELRVKSDEP 206
Query: 226 QAP 228
P
Sbjct: 207 PGP 209
>gi|116325993 c114 SLIT-like testicular protein [Homo sapiens]
Length = 1700
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/218 (26%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 20 QAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKL---PEHMNPPAAWEA 76
Q+Q Q L E ++ P + + D SE P + PE NP +
Sbjct: 174 QSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDI 233
Query: 77 QKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAP-----ESLAPPATRESQKPP---- 127
Q + + + P + LL EP + QEAPA P ESL P S +PP
Sbjct: 234 QSSS--LQQEAPAQLPQLLEEEPSSMQ--QEAPALPPESSMESLTLPNHEVSVQPPGEDQ 289
Query: 128 MAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+ +P + PA+ + TI EP N E P + PE E +A + + P
Sbjct: 290 AYYHLPNITVK--PADVE-VTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEP 346
Query: 188 P-------------QEPLEPSNAQEFLELSAAQESLEG 212
P Q+P++PS + +E S Q+ G
Sbjct: 347 PVPPMEHELSISEQQQPVQPSESPREVESSPTQQETPG 384
Score = 41.6 bits (96), Expect = 0.002
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 20/183 (10%)
Query: 27 MEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEH----MNPPAAWEAQKTPEF 82
ME ++ Q +Q S++ +E + ++ + P + PEH ++PP +
Sbjct: 351 MEHELSISEQQQPVQPSESPREVE--SSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASP 408
Query: 83 KEPQKPPEPQDLLPWEPPA----AWELQEAPA----APESLAPPATRESQKPPMAHEIPT 134
KPP+ Q + EP A + QEA + + PPA + PP+ +P
Sbjct: 409 SVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGG-PPL---LPE 464
Query: 135 VLEGQGPANTQDATIAQ--EPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPL 192
E GP Q T Q EP N+E P E E P+ E + P Q P
Sbjct: 465 SSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPE 524
Query: 193 EPS 195
P+
Sbjct: 525 FPN 527
Score = 30.8 bits (68), Expect = 2.8
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 21/146 (14%)
Query: 79 TPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRE--------SQKPPMAH 130
+P+ + P P + L +P W L E L+ P +++ S P
Sbjct: 138 SPQERLPVSPKK----LKKDPAQRWSLAEIIGITRQLSTPQSQKQTLQNEYSSTDTPYPG 193
Query: 131 EIPTVLE---GQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+P L + P ++ +Q E Q+P +E Q + QE AQL P
Sbjct: 194 SLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQL------P 247
Query: 188 PQEPLEPSNAQEFLELSAAQESLEGL 213
EPS+ Q+ + S+E L
Sbjct: 248 QLLEEEPSSMQQEAPALPPESSMESL 273
>gi|110665701 leucine rich repeat containing 37A [Homo sapiens]
Length = 1700
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/218 (26%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 20 QAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKL---PEHMNPPAAWEA 76
Q+Q Q L E ++ P + + D SE P + PE NP +
Sbjct: 174 QSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDI 233
Query: 77 QKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAP-----ESLAPPATRESQKPP---- 127
Q + + + P + LL EP + QEAPA P ESL P S +PP
Sbjct: 234 QSSS--LQQEAPAQLPQLLEEEPSSMQ--QEAPALPPESSMESLTLPNHEVSVQPPGEDQ 289
Query: 128 MAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+ +P + PA+ + TI EP N E P + PE E +A + + P
Sbjct: 290 AYYHLPNITVK--PADVE-VTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEP 346
Query: 188 P-------------QEPLEPSNAQEFLELSAAQESLEG 212
P Q+P++PS + +E S Q+ G
Sbjct: 347 PVPPMEHELSISEQQQPVQPSESPREVESSPTQQETPG 384
Score = 41.6 bits (96), Expect = 0.002
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 20/183 (10%)
Query: 27 MEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEH----MNPPAAWEAQKTPEF 82
ME ++ Q +Q S++ +E + ++ + P + PEH ++PP +
Sbjct: 351 MEHELSISEQQQPVQPSESPREVE--SSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASP 408
Query: 83 KEPQKPPEPQDLLPWEPPA----AWELQEAPA----APESLAPPATRESQKPPMAHEIPT 134
KPP+ Q + EP A + QEA + + PPA + PP+ +P
Sbjct: 409 SVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGG-PPL---LPE 464
Query: 135 VLEGQGPANTQDATIAQ--EPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPL 192
E GP Q T Q EP N+E P E E P+ E + P Q P
Sbjct: 465 SSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPE 524
Query: 193 EPS 195
P+
Sbjct: 525 FPN 527
Score = 30.8 bits (68), Expect = 2.8
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 21/146 (14%)
Query: 79 TPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRE--------SQKPPMAH 130
+P+ + P P + L +P W L E L+ P +++ S P
Sbjct: 138 SPQERLPVSPKK----LKKDPAQRWSLAEIIGITRQLSTPQSQKQTLQNEYSSTDTPYPG 193
Query: 131 EIPTVLE---GQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPP 187
+P L + P ++ +Q E Q+P +E Q + QE AQL P
Sbjct: 194 SLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQL------P 247
Query: 188 PQEPLEPSNAQEFLELSAAQESLEGL 213
EPS+ Q+ + S+E L
Sbjct: 248 QLLEEEPSSMQQEAPALPPESSMESL 273
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 49.3 bits (116), Expect = 8e-06
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 21/213 (9%)
Query: 28 EENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQK 87
E ++ ++ + + S+ +K +E +K H + + Q+ P Q
Sbjct: 702 ESESSSESSSSDSEDSETEMAPKSKKKGHPGREQKKHHHHHHQ----QMQQAPAPVPQQP 757
Query: 88 PPEPQDLLPWEPPAAWELQEAPAAPESL---APPATRESQKPPMAHEIPTVLEGQGPANT 144
PP PQ P PP + P P S+ A PA + S P +A ++P VLE Q P +
Sbjct: 758 PPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVP-VLEPQLPGSV 816
Query: 145 QD------ATIAQEPKNSEPQDPPNIEKPQE--APEY--QETAAQLEFLELPPPQEPLEP 194
D I P +P+ PP++ +P E P + Q L PQ+P P
Sbjct: 817 FDPIGHFTQPILHLP---QPELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRP 873
Query: 195 SNAQEFLELSAAQESLEGLIVVETSAASEFPQA 227
SN L A+ + +T + P A
Sbjct: 874 SNRAAALPPKPARPPAVSPALTQTPLLPQPPMA 906
Score = 37.4 bits (85), Expect = 0.030
Identities = 41/157 (26%), Positives = 57/157 (36%), Gaps = 30/157 (19%)
Query: 43 SQAAKEYDLLRKSSEAKEPQKLPEHMNPPA-----------AWEAQKT-------PEFKE 84
S A + LL + A+ PQ L E PPA + QK P K
Sbjct: 891 SPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKV 950
Query: 85 PQKPPEPQDLLPWEPPAAWELQE--APAAPESLAPPATRESQKPPMAHEIPTVLEGQGPA 142
+PP P P P +LQ+ P P PP ++ Q PP + +
Sbjct: 951 QSQPPPPLPPPP-HPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPM------- 1002
Query: 143 NTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQ 179
Q +T Q+P + Q PP+ Q+ P Q Q
Sbjct: 1003 --QFSTHIQQPPPPQGQQPPHPPPGQQPPPPQPAKPQ 1037
Score = 37.4 bits (85), Expect = 0.030
Identities = 46/192 (23%), Positives = 70/192 (36%), Gaps = 15/192 (7%)
Query: 33 LQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQ 92
+Q + +LQK Q L +++ P LP +P + Q+ P P +P P
Sbjct: 928 MQLYLQQLQKVQPPTPL-LPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPP 986
Query: 93 DLLPWEPPAAWELQEAPAAPESLAPPATRESQ--KPPMAHEIPTVLEGQGPANTQDATIA 150
PP LQ + PP + Q PP + P PA Q
Sbjct: 987 QQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPP----PQPAKPQQVIQH 1042
Query: 151 QEPKNSEPQDPPNIEKPQEAPE----YQETAAQLEFL-ELPPPQEPLEPSNAQEFLELSA 205
DP + +EAP + +Q + L PPQ+ ++P QE S
Sbjct: 1043 HHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPKK-QELRAASV 1101
Query: 206 AQESLEGLIVVE 217
Q + L+VV+
Sbjct: 1102 VQP--QPLVVVK 1111
Score = 35.4 bits (80), Expect = 0.11
Identities = 37/133 (27%), Positives = 48/133 (36%), Gaps = 16/133 (12%)
Query: 64 LPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRES 123
LP+ PP P+ E PP PPA A P+ + P+ R +
Sbjct: 830 LPQPELPP------HLPQPPEHSTPPHLNQHAVVSPPALHN-----ALPQQPSRPSNRAA 878
Query: 124 QKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAP-EYQETAAQLEF 182
PP P V PA TQ + Q P PQ E+P P + L+
Sbjct: 879 ALPPKPARPPAV----SPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQ 934
Query: 183 LELPPPQEPLEPS 195
L+ P PL PS
Sbjct: 935 LQKVQPPTPLLPS 947
>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
sapiens]
Length = 756
Score = 48.1 bits (113), Expect = 2e-05
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 38 PELQKSQAAKEYDLLR---KSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDL 94
PEL + + + D+ S EA + K P++ E TPE PQ PP +
Sbjct: 488 PELSEEEVSTRDDIQFHHFSSEEALQKVKYFVAKEDPSSQEEAHTPEAPPPQ-PPSSERC 546
Query: 95 LPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPK 154
L +P E + PA+R + + P HE T L + P+N + +
Sbjct: 547 LGEMKCTLVRGDSSPRQAELKSGPASRPALEKPHPHEEATTLPEEAPSN--------DER 598
Query: 155 NSEPQDPPNIEKP-QEAPEYQETAAQLEFLELP---PPQEPLEPSNAQEFLELSAAQES 209
E + PPN ++P +E +E A E + L PP+E + P +E + AQ++
Sbjct: 599 TPEEEAPPNEQRPLREEVLPKEGVASKEEVTLKEELPPKEEVAPKEEVPPIERAFAQKT 657
Score = 32.0 bits (71), Expect = 1.3
Identities = 33/138 (23%), Positives = 50/138 (36%), Gaps = 21/138 (15%)
Query: 61 PQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPAT 120
P K PPA A + + P K P P+ L + + P
Sbjct: 356 PDKTATPERPPAPENAPSSKKIPAPDKVPSPEKTL--------------TLGDKASIPGN 401
Query: 121 RESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNS-EPQDPPNIEKPQEAPEYQETAAQ 179
S K P ++PT + P + A P+NS P++ ++KP PE + +
Sbjct: 402 STSGKIPAPDKVPTPEKMVTPEDK-----ASIPENSIIPEETLTVDKP-STPERVFSVEE 455
Query: 180 LEFLELPPPQEPLEPSNA 197
LE PP + P A
Sbjct: 456 SPALEAPPMDKVPNPKMA 473
>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
sapiens]
Length = 645
Score = 48.1 bits (113), Expect = 2e-05
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 38 PELQKSQAAKEYDLLR---KSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDL 94
PEL + + + D+ S EA + K P++ E TPE PQ PP +
Sbjct: 377 PELSEEEVSTRDDIQFHHFSSEEALQKVKYFVAKEDPSSQEEAHTPEAPPPQ-PPSSERC 435
Query: 95 LPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPK 154
L +P E + PA+R + + P HE T L + P+N + +
Sbjct: 436 LGEMKCTLVRGDSSPRQAELKSGPASRPALEKPHPHEEATTLPEEAPSN--------DER 487
Query: 155 NSEPQDPPNIEKP-QEAPEYQETAAQLEFLELP---PPQEPLEPSNAQEFLELSAAQES 209
E + PPN ++P +E +E A E + L PP+E + P +E + AQ++
Sbjct: 488 TPEEEAPPNEQRPLREEVLPKEGVASKEEVTLKEELPPKEEVAPKEEVPPIERAFAQKT 546
Score = 32.0 bits (71), Expect = 1.3
Identities = 33/138 (23%), Positives = 50/138 (36%), Gaps = 21/138 (15%)
Query: 61 PQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPAT 120
P K PPA A + + P K P P+ L + + P
Sbjct: 245 PDKTATPERPPAPENAPSSKKIPAPDKVPSPEKTL--------------TLGDKASIPGN 290
Query: 121 RESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNS-EPQDPPNIEKPQEAPEYQETAAQ 179
S K P ++PT + P + A P+NS P++ ++KP PE + +
Sbjct: 291 STSGKIPAPDKVPTPEKMVTPEDK-----ASIPENSIIPEETLTVDKP-STPERVFSVEE 344
Query: 180 LEFLELPPPQEPLEPSNA 197
LE PP + P A
Sbjct: 345 SPALEAPPMDKVPNPKMA 362
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 47.8 bits (112), Expect = 2e-05
Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 10/146 (6%)
Query: 59 KEPQKL-PEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP 117
KEP P+ P E T + P P EP P +P + AP P+ AP
Sbjct: 315 KEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 374
Query: 118 -------PATRESQKPPMAHEIPTVLEGQGPANTQDA-TIAQEPKNSEPQDPPNIEKPQE 169
P T + P PT + P T+ A T +EP + ++P +
Sbjct: 375 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 434
Query: 170 APEYQETAAQLEFLELPPPQEPLEPS 195
AP + A E P P P EP+
Sbjct: 435 APTTPKKPAPTTPKE-PAPTTPKEPA 459
Score = 47.4 bits (111), Expect = 3e-05
Identities = 45/176 (25%), Positives = 64/176 (36%), Gaps = 30/176 (17%)
Query: 41 QKSQAAKEYDLLRKSS--EAKEPQKLPEHMNPPAAWE----AQKTPEFKEPQKPPEPQDL 94
+K+ +AKE + K+S + K+ P A A TP+ P P EP
Sbjct: 168 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 227
Query: 95 LPWEP--------------PAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQG 140
P EP PA + AP P+ AP T+E PT +
Sbjct: 228 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 287
Query: 141 PANTQDA-TIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPS 195
P T+ A T +EP + P+ P + AP + P P P EP+
Sbjct: 288 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---------PTPTTPKEPA 334
Score = 45.1 bits (105), Expect = 1e-04
Identities = 34/122 (27%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 76 AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTV 135
A TP+ P P EP P EP + AP P+ AP +E+ PT
Sbjct: 435 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 494
Query: 136 LEGQGPANTQD--ATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLE 193
E P + T +E + P++P + AP + AA E P P P E
Sbjct: 495 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE-PAPTTPKE 553
Query: 194 PS 195
P+
Sbjct: 554 PA 555
Score = 43.5 bits (101), Expect = 4e-04
Identities = 39/147 (26%), Positives = 51/147 (34%), Gaps = 17/147 (11%)
Query: 65 PEHMNPPAAWE-AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP------ 117
PE P E A TP+ P P EP P EP + AP P+ AP
Sbjct: 519 PEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGT 578
Query: 118 -------PATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDP--PNIEKPQ 168
PA +KP PT + + + T D PK + P P P P+
Sbjct: 579 APTTLKEPAPTTPKKPAPKELAPTTTK-EPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 637
Query: 169 EAPEYQETAAQLEFLELPPPQEPLEPS 195
E L+ P P P +P+
Sbjct: 638 EPAPTTPKGTAPTTLKEPAPTTPKKPA 664
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/146 (26%), Positives = 51/146 (34%), Gaps = 7/146 (4%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPP 118
KEP P E T P P EP EP + AP P+ AP
Sbjct: 386 KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 445
Query: 119 ATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNI--EKPQE-APEYQE 175
+E PT + P ++ PK + P P + P++ AP E
Sbjct: 446 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPA-PTTPKETAPTTPKKLTPTTPEKLAPTTPE 504
Query: 176 TAAQLEFLELPP--PQEPLEPSNAQE 199
A EL P P+EP P+ +E
Sbjct: 505 KPAPTTPEELAPTTPEEP-TPTTPEE 529
Score = 40.4 bits (93), Expect = 0.004
Identities = 37/143 (25%), Positives = 51/143 (35%), Gaps = 13/143 (9%)
Query: 55 SSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPES 114
S+ KEP P E T P P EP EP AP P+
Sbjct: 226 STTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP--------APTTPKE 277
Query: 115 LAPPATRESQKPPMAHEIPTVLEGQGPANTQD--ATIAQEPKNSEPQDPPNIEKPQEAPE 172
AP T+E P PT + P + T +EP + P++P + AP
Sbjct: 278 PAPTTTKE-PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 336
Query: 173 YQETAAQLEFLELPPPQEPLEPS 195
+E A + P P P +P+
Sbjct: 337 TKEPAPTTP--KEPAPTAPKKPA 357
Score = 38.9 bits (89), Expect = 0.010
Identities = 40/144 (27%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 61 PQKL----PEHMNPPAAWE-AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESL 115
P+KL PE P E A TPE P P EP P + AP P+
Sbjct: 495 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 554
Query: 116 APPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDP-PNIEKPQEAPEYQ 174
AP +E PT +G P T +EP + P+ P P P E
Sbjct: 555 APTTPKEPAPTTPKETAPTTPKGTAP------TTLKEPAPTTPKKPAPKELAPTTTKEPT 608
Query: 175 ETAAQLEFLELP---PPQEPLEPS 195
T P P P EP+
Sbjct: 609 STTCDKPAPTTPKGTAPTTPKEPA 632
Score = 37.7 bits (86), Expect = 0.023
Identities = 38/138 (27%), Positives = 48/138 (34%), Gaps = 17/138 (12%)
Query: 59 KEPQKL-PEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP 117
KEP P+ P E T P P EP P +P AP P+ AP
Sbjct: 268 KEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKP--------APTTPKEPAP 319
Query: 118 PATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETA 177
+E PT E PA T +EP + P+ P + AP +
Sbjct: 320 TTPKEPTPTTPKEPAPTTKE---PA----PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 372
Query: 178 AQLEFLELPPPQEPLEPS 195
A E P P P EP+
Sbjct: 373 APTTTKE-PSPTTPKEPA 389
Score = 36.2 bits (82), Expect = 0.067
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 15/107 (14%)
Query: 76 AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTV 135
A TP+ P P EP P +P AP PE+ PP T E P E PT
Sbjct: 685 APTTPKETAPTTPKEPAPTTPKKP--------APTTPET-PPPTTSEVSTPTTTKE-PTT 734
Query: 136 LEGQGPANTQDATIAQEPK--NSEPQDP--PNIEKPQEA-PEYQETA 177
+ +T + + PK + P++P P + P PE TA
Sbjct: 735 IHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTA 781
Score = 35.8 bits (81), Expect = 0.087
Identities = 35/142 (24%), Positives = 48/142 (33%), Gaps = 17/142 (11%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQ----KPPEPQDLLPW---EPPAAWELQEAPAA 111
KEP P + KEP K P P++L P EP + + AP
Sbjct: 560 KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTT 619
Query: 112 PESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAP 171
P+ AP +E PT +G P T +EP + P+ P P+E
Sbjct: 620 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAP------TTLKEPAPTTPKKP----APKELA 669
Query: 172 EYQETAAQLEFLELPPPQEPLE 193
+ P P P E
Sbjct: 670 PTTTKGPTSTTSDKPAPTTPKE 691
Score = 33.5 bits (75), Expect = 0.43
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 16/117 (13%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQ----KPPEPQDLLPWE---PPAAWELQEAPAA 111
KEP P + KEP K P P++L P P + + AP
Sbjct: 629 KEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTT 688
Query: 112 PESLAP-----PATRESQKP-PMAHEI--PTVLEGQGPANTQD-ATIAQEPKNSEPQ 159
P+ AP PA +KP P E PT E P T++ TI + P S P+
Sbjct: 689 PKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPE 745
Score = 32.3 bits (72), Expect = 0.96
Identities = 31/117 (26%), Positives = 43/117 (36%), Gaps = 15/117 (12%)
Query: 79 TPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEG 138
TPE P P +P P E + P PE A P T ++ P E
Sbjct: 494 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA-PTTPKAAAPNTPKE------- 545
Query: 139 QGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPS 195
PA T +EP + P++P + AP + A E P P P +P+
Sbjct: 546 --PA----PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKE-PAPTTPKKPA 595
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 47.8 bits (112), Expect = 2e-05
Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 10/146 (6%)
Query: 59 KEPQKL-PEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP 117
KEP P+ P E T + P P EP P +P + AP P+ AP
Sbjct: 356 KEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 415
Query: 118 -------PATRESQKPPMAHEIPTVLEGQGPANTQDA-TIAQEPKNSEPQDPPNIEKPQE 169
P T + P PT + P T+ A T +EP + ++P +
Sbjct: 416 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 475
Query: 170 APEYQETAAQLEFLELPPPQEPLEPS 195
AP + A E P P P EP+
Sbjct: 476 APTTPKKPAPTTPKE-PAPTTPKEPA 500
Score = 47.4 bits (111), Expect = 3e-05
Identities = 45/176 (25%), Positives = 64/176 (36%), Gaps = 30/176 (17%)
Query: 41 QKSQAAKEYDLLRKSS--EAKEPQKLPEHMNPPAAWE----AQKTPEFKEPQKPPEPQDL 94
+K+ +AKE + K+S + K+ P A A TP+ P P EP
Sbjct: 209 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 268
Query: 95 LPWEP--------------PAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQG 140
P EP PA + AP P+ AP T+E PT +
Sbjct: 269 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 328
Query: 141 PANTQDA-TIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPS 195
P T+ A T +EP + P+ P + AP + P P P EP+
Sbjct: 329 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---------PTPTTPKEPA 375
Score = 45.1 bits (105), Expect = 1e-04
Identities = 34/122 (27%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 76 AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTV 135
A TP+ P P EP P EP + AP P+ AP +E+ PT
Sbjct: 476 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 535
Query: 136 LEGQGPANTQD--ATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLE 193
E P + T +E + P++P + AP + AA E P P P E
Sbjct: 536 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE-PAPTTPKE 594
Query: 194 PS 195
P+
Sbjct: 595 PA 596
Score = 43.5 bits (101), Expect = 4e-04
Identities = 39/147 (26%), Positives = 51/147 (34%), Gaps = 17/147 (11%)
Query: 65 PEHMNPPAAWE-AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP------ 117
PE P E A TP+ P P EP P EP + AP P+ AP
Sbjct: 560 PEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGT 619
Query: 118 -------PATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDP--PNIEKPQ 168
PA +KP PT + + + T D PK + P P P P+
Sbjct: 620 APTTLKEPAPTTPKKPAPKELAPTTTK-EPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 678
Query: 169 EAPEYQETAAQLEFLELPPPQEPLEPS 195
E L+ P P P +P+
Sbjct: 679 EPAPTTPKGTAPTTLKEPAPTTPKKPA 705
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/146 (26%), Positives = 51/146 (34%), Gaps = 7/146 (4%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPP 118
KEP P E T P P EP EP + AP P+ AP
Sbjct: 427 KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 486
Query: 119 ATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNI--EKPQE-APEYQE 175
+E PT + P ++ PK + P P + P++ AP E
Sbjct: 487 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPA-PTTPKETAPTTPKKLTPTTPEKLAPTTPE 545
Query: 176 TAAQLEFLELPP--PQEPLEPSNAQE 199
A EL P P+EP P+ +E
Sbjct: 546 KPAPTTPEELAPTTPEEP-TPTTPEE 570
Score = 40.4 bits (93), Expect = 0.004
Identities = 37/143 (25%), Positives = 51/143 (35%), Gaps = 13/143 (9%)
Query: 55 SSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPES 114
S+ KEP P E T P P EP EP AP P+
Sbjct: 267 STTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP--------APTTPKE 318
Query: 115 LAPPATRESQKPPMAHEIPTVLEGQGPANTQD--ATIAQEPKNSEPQDPPNIEKPQEAPE 172
AP T+E P PT + P + T +EP + P++P + AP
Sbjct: 319 PAPTTTKE-PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 377
Query: 173 YQETAAQLEFLELPPPQEPLEPS 195
+E A + P P P +P+
Sbjct: 378 TKEPAPTTP--KEPAPTAPKKPA 398
Score = 38.9 bits (89), Expect = 0.010
Identities = 40/144 (27%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 61 PQKL----PEHMNPPAAWE-AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESL 115
P+KL PE P E A TPE P P EP P + AP P+
Sbjct: 536 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 595
Query: 116 APPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDP-PNIEKPQEAPEYQ 174
AP +E PT +G P T +EP + P+ P P P E
Sbjct: 596 APTTPKEPAPTTPKETAPTTPKGTAP------TTLKEPAPTTPKKPAPKELAPTTTKEPT 649
Query: 175 ETAAQLEFLELP---PPQEPLEPS 195
T P P P EP+
Sbjct: 650 STTCDKPAPTTPKGTAPTTPKEPA 673
Score = 37.7 bits (86), Expect = 0.023
Identities = 38/138 (27%), Positives = 48/138 (34%), Gaps = 17/138 (12%)
Query: 59 KEPQKL-PEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP 117
KEP P+ P E T P P EP P +P AP P+ AP
Sbjct: 309 KEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKP--------APTTPKEPAP 360
Query: 118 PATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETA 177
+E PT E PA T +EP + P+ P + AP +
Sbjct: 361 TTPKEPTPTTPKEPAPTTKE---PA----PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 413
Query: 178 AQLEFLELPPPQEPLEPS 195
A E P P P EP+
Sbjct: 414 APTTTKE-PSPTTPKEPA 430
Score = 36.2 bits (82), Expect = 0.067
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 15/107 (14%)
Query: 76 AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTV 135
A TP+ P P EP P +P AP PE+ PP T E P E PT
Sbjct: 726 APTTPKETAPTTPKEPAPTTPKKP--------APTTPET-PPPTTSEVSTPTTTKE-PTT 775
Query: 136 LEGQGPANTQDATIAQEPK--NSEPQDP--PNIEKPQEA-PEYQETA 177
+ +T + + PK + P++P P + P PE TA
Sbjct: 776 IHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTA 822
Score = 35.8 bits (81), Expect = 0.087
Identities = 35/142 (24%), Positives = 48/142 (33%), Gaps = 17/142 (11%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQ----KPPEPQDLLPW---EPPAAWELQEAPAA 111
KEP P + KEP K P P++L P EP + + AP
Sbjct: 601 KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTT 660
Query: 112 PESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAP 171
P+ AP +E PT +G P T +EP + P+ P P+E
Sbjct: 661 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAP------TTLKEPAPTTPKKP----APKELA 710
Query: 172 EYQETAAQLEFLELPPPQEPLE 193
+ P P P E
Sbjct: 711 PTTTKGPTSTTSDKPAPTTPKE 732
Score = 33.5 bits (75), Expect = 0.43
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 16/117 (13%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQ----KPPEPQDLLPWE---PPAAWELQEAPAA 111
KEP P + KEP K P P++L P P + + AP
Sbjct: 670 KEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTT 729
Query: 112 PESLAP-----PATRESQKP-PMAHEI--PTVLEGQGPANTQD-ATIAQEPKNSEPQ 159
P+ AP PA +KP P E PT E P T++ TI + P S P+
Sbjct: 730 PKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPE 786
Score = 32.3 bits (72), Expect = 0.96
Identities = 31/117 (26%), Positives = 43/117 (36%), Gaps = 15/117 (12%)
Query: 79 TPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEG 138
TPE P P +P P E + P PE A P T ++ P E
Sbjct: 535 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA-PTTPKAAAPNTPKE------- 586
Query: 139 QGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPS 195
PA T +EP + P++P + AP + A E P P P +P+
Sbjct: 587 --PA----PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKE-PAPTTPKKPA 636
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 47.8 bits (112), Expect = 2e-05
Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 10/146 (6%)
Query: 59 KEPQKL-PEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP 117
KEP P+ P E T + P P EP P +P + AP P+ AP
Sbjct: 408 KEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 467
Query: 118 -------PATRESQKPPMAHEIPTVLEGQGPANTQDA-TIAQEPKNSEPQDPPNIEKPQE 169
P T + P PT + P T+ A T +EP + ++P +
Sbjct: 468 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 527
Query: 170 APEYQETAAQLEFLELPPPQEPLEPS 195
AP + A E P P P EP+
Sbjct: 528 APTTPKKPAPTTPKE-PAPTTPKEPA 552
Score = 47.4 bits (111), Expect = 3e-05
Identities = 45/176 (25%), Positives = 64/176 (36%), Gaps = 30/176 (17%)
Query: 41 QKSQAAKEYDLLRKSS--EAKEPQKLPEHMNPPAAWE----AQKTPEFKEPQKPPEPQDL 94
+K+ +AKE + K+S + K+ P A A TP+ P P EP
Sbjct: 261 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 320
Query: 95 LPWEP--------------PAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQG 140
P EP PA + AP P+ AP T+E PT +
Sbjct: 321 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 380
Query: 141 PANTQDA-TIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPS 195
P T+ A T +EP + P+ P + AP + P P P EP+
Sbjct: 381 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---------PTPTTPKEPA 427
Score = 45.1 bits (105), Expect = 1e-04
Identities = 34/122 (27%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 76 AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTV 135
A TP+ P P EP P EP + AP P+ AP +E+ PT
Sbjct: 528 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 587
Query: 136 LEGQGPANTQD--ATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLE 193
E P + T +E + P++P + AP + AA E P P P E
Sbjct: 588 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE-PAPTTPKE 646
Query: 194 PS 195
P+
Sbjct: 647 PA 648
Score = 43.5 bits (101), Expect = 4e-04
Identities = 39/147 (26%), Positives = 51/147 (34%), Gaps = 17/147 (11%)
Query: 65 PEHMNPPAAWE-AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP------ 117
PE P E A TP+ P P EP P EP + AP P+ AP
Sbjct: 612 PEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGT 671
Query: 118 -------PATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDP--PNIEKPQ 168
PA +KP PT + + + T D PK + P P P P+
Sbjct: 672 APTTLKEPAPTTPKKPAPKELAPTTTK-EPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 730
Query: 169 EAPEYQETAAQLEFLELPPPQEPLEPS 195
E L+ P P P +P+
Sbjct: 731 EPAPTTPKGTAPTTLKEPAPTTPKKPA 757
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/146 (26%), Positives = 51/146 (34%), Gaps = 7/146 (4%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPP 118
KEP P E T P P EP EP + AP P+ AP
Sbjct: 479 KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 538
Query: 119 ATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNI--EKPQE-APEYQE 175
+E PT + P ++ PK + P P + P++ AP E
Sbjct: 539 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPA-PTTPKETAPTTPKKLTPTTPEKLAPTTPE 597
Query: 176 TAAQLEFLELPP--PQEPLEPSNAQE 199
A EL P P+EP P+ +E
Sbjct: 598 KPAPTTPEELAPTTPEEP-TPTTPEE 622
Score = 40.4 bits (93), Expect = 0.004
Identities = 37/143 (25%), Positives = 51/143 (35%), Gaps = 13/143 (9%)
Query: 55 SSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPES 114
S+ KEP P E T P P EP EP AP P+
Sbjct: 319 STTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP--------APTTPKE 370
Query: 115 LAPPATRESQKPPMAHEIPTVLEGQGPANTQD--ATIAQEPKNSEPQDPPNIEKPQEAPE 172
AP T+E P PT + P + T +EP + P++P + AP
Sbjct: 371 PAPTTTKE-PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 429
Query: 173 YQETAAQLEFLELPPPQEPLEPS 195
+E A + P P P +P+
Sbjct: 430 TKEPAPTTP--KEPAPTAPKKPA 450
Score = 38.9 bits (89), Expect = 0.010
Identities = 40/144 (27%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 61 PQKL----PEHMNPPAAWE-AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESL 115
P+KL PE P E A TPE P P EP P + AP P+
Sbjct: 588 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 647
Query: 116 APPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDP-PNIEKPQEAPEYQ 174
AP +E PT +G P T +EP + P+ P P P E
Sbjct: 648 APTTPKEPAPTTPKETAPTTPKGTAP------TTLKEPAPTTPKKPAPKELAPTTTKEPT 701
Query: 175 ETAAQLEFLELP---PPQEPLEPS 195
T P P P EP+
Sbjct: 702 STTCDKPAPTTPKGTAPTTPKEPA 725
Score = 37.7 bits (86), Expect = 0.023
Identities = 38/138 (27%), Positives = 48/138 (34%), Gaps = 17/138 (12%)
Query: 59 KEPQKL-PEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP 117
KEP P+ P E T P P EP P +P AP P+ AP
Sbjct: 361 KEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKP--------APTTPKEPAP 412
Query: 118 PATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETA 177
+E PT E PA T +EP + P+ P + AP +
Sbjct: 413 TTPKEPTPTTPKEPAPTTKE---PA----PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 465
Query: 178 AQLEFLELPPPQEPLEPS 195
A E P P P EP+
Sbjct: 466 APTTTKE-PSPTTPKEPA 482
Score = 36.2 bits (82), Expect = 0.067
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 15/107 (14%)
Query: 76 AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTV 135
A TP+ P P EP P +P AP PE+ PP T E P E PT
Sbjct: 778 APTTPKETAPTTPKEPAPTTPKKP--------APTTPET-PPPTTSEVSTPTTTKE-PTT 827
Query: 136 LEGQGPANTQDATIAQEPK--NSEPQDP--PNIEKPQEA-PEYQETA 177
+ +T + + PK + P++P P + P PE TA
Sbjct: 828 IHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTA 874
Score = 35.8 bits (81), Expect = 0.087
Identities = 35/142 (24%), Positives = 48/142 (33%), Gaps = 17/142 (11%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQ----KPPEPQDLLPW---EPPAAWELQEAPAA 111
KEP P + KEP K P P++L P EP + + AP
Sbjct: 653 KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTT 712
Query: 112 PESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAP 171
P+ AP +E PT +G P T +EP + P+ P P+E
Sbjct: 713 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAP------TTLKEPAPTTPKKP----APKELA 762
Query: 172 EYQETAAQLEFLELPPPQEPLE 193
+ P P P E
Sbjct: 763 PTTTKGPTSTTSDKPAPTTPKE 784
Score = 33.5 bits (75), Expect = 0.43
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 16/117 (13%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQ----KPPEPQDLLPWE---PPAAWELQEAPAA 111
KEP P + KEP K P P++L P P + + AP
Sbjct: 722 KEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTT 781
Query: 112 PESLAP-----PATRESQKP-PMAHEI--PTVLEGQGPANTQD-ATIAQEPKNSEPQ 159
P+ AP PA +KP P E PT E P T++ TI + P S P+
Sbjct: 782 PKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPE 838
Score = 32.3 bits (72), Expect = 0.96
Identities = 31/117 (26%), Positives = 43/117 (36%), Gaps = 15/117 (12%)
Query: 79 TPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEG 138
TPE P P +P P E + P PE A P T ++ P E
Sbjct: 587 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA-PTTPKAAAPNTPKE------- 638
Query: 139 QGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPS 195
PA T +EP + P++P + AP + A E P P P +P+
Sbjct: 639 --PA----PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKE-PAPTTPKKPA 688
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 47.8 bits (112), Expect = 2e-05
Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 10/146 (6%)
Query: 59 KEPQKL-PEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP 117
KEP P+ P E T + P P EP P +P + AP P+ AP
Sbjct: 449 KEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 508
Query: 118 -------PATRESQKPPMAHEIPTVLEGQGPANTQDA-TIAQEPKNSEPQDPPNIEKPQE 169
P T + P PT + P T+ A T +EP + ++P +
Sbjct: 509 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 568
Query: 170 APEYQETAAQLEFLELPPPQEPLEPS 195
AP + A E P P P EP+
Sbjct: 569 APTTPKKPAPTTPKE-PAPTTPKEPA 593
Score = 47.4 bits (111), Expect = 3e-05
Identities = 45/176 (25%), Positives = 64/176 (36%), Gaps = 30/176 (17%)
Query: 41 QKSQAAKEYDLLRKSS--EAKEPQKLPEHMNPPAAWE----AQKTPEFKEPQKPPEPQDL 94
+K+ +AKE + K+S + K+ P A A TP+ P P EP
Sbjct: 302 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 361
Query: 95 LPWEP--------------PAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQG 140
P EP PA + AP P+ AP T+E PT +
Sbjct: 362 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 421
Query: 141 PANTQDA-TIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPS 195
P T+ A T +EP + P+ P + AP + P P P EP+
Sbjct: 422 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE---------PTPTTPKEPA 468
Score = 45.1 bits (105), Expect = 1e-04
Identities = 34/122 (27%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 76 AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTV 135
A TP+ P P EP P EP + AP P+ AP +E+ PT
Sbjct: 569 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 628
Query: 136 LEGQGPANTQD--ATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLE 193
E P + T +E + P++P + AP + AA E P P P E
Sbjct: 629 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE-PAPTTPKE 687
Query: 194 PS 195
P+
Sbjct: 688 PA 689
Score = 43.5 bits (101), Expect = 4e-04
Identities = 39/147 (26%), Positives = 51/147 (34%), Gaps = 17/147 (11%)
Query: 65 PEHMNPPAAWE-AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP------ 117
PE P E A TP+ P P EP P EP + AP P+ AP
Sbjct: 653 PEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGT 712
Query: 118 -------PATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDP--PNIEKPQ 168
PA +KP PT + + + T D PK + P P P P+
Sbjct: 713 APTTLKEPAPTTPKKPAPKELAPTTTK-EPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 771
Query: 169 EAPEYQETAAQLEFLELPPPQEPLEPS 195
E L+ P P P +P+
Sbjct: 772 EPAPTTPKGTAPTTLKEPAPTTPKKPA 798
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/146 (26%), Positives = 51/146 (34%), Gaps = 7/146 (4%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPP 118
KEP P E T P P EP EP + AP P+ AP
Sbjct: 520 KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 579
Query: 119 ATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNI--EKPQE-APEYQE 175
+E PT + P ++ PK + P P + P++ AP E
Sbjct: 580 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPA-PTTPKETAPTTPKKLTPTTPEKLAPTTPE 638
Query: 176 TAAQLEFLELPP--PQEPLEPSNAQE 199
A EL P P+EP P+ +E
Sbjct: 639 KPAPTTPEELAPTTPEEP-TPTTPEE 663
Score = 40.4 bits (93), Expect = 0.004
Identities = 37/143 (25%), Positives = 51/143 (35%), Gaps = 13/143 (9%)
Query: 55 SSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPES 114
S+ KEP P E T P P EP EP AP P+
Sbjct: 360 STTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP--------APTTPKE 411
Query: 115 LAPPATRESQKPPMAHEIPTVLEGQGPANTQD--ATIAQEPKNSEPQDPPNIEKPQEAPE 172
AP T+E P PT + P + T +EP + P++P + AP
Sbjct: 412 PAPTTTKE-PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 470
Query: 173 YQETAAQLEFLELPPPQEPLEPS 195
+E A + P P P +P+
Sbjct: 471 TKEPAPTTP--KEPAPTAPKKPA 491
Score = 38.9 bits (89), Expect = 0.010
Identities = 40/144 (27%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 61 PQKL----PEHMNPPAAWE-AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESL 115
P+KL PE P E A TPE P P EP P + AP P+
Sbjct: 629 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 688
Query: 116 APPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDP-PNIEKPQEAPEYQ 174
AP +E PT +G P T +EP + P+ P P P E
Sbjct: 689 APTTPKEPAPTTPKETAPTTPKGTAP------TTLKEPAPTTPKKPAPKELAPTTTKEPT 742
Query: 175 ETAAQLEFLELP---PPQEPLEPS 195
T P P P EP+
Sbjct: 743 STTCDKPAPTTPKGTAPTTPKEPA 766
Score = 37.7 bits (86), Expect = 0.023
Identities = 38/138 (27%), Positives = 48/138 (34%), Gaps = 17/138 (12%)
Query: 59 KEPQKL-PEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAP 117
KEP P+ P E T P P EP P +P AP P+ AP
Sbjct: 402 KEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKP--------APTTPKEPAP 453
Query: 118 PATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETA 177
+E PT E PA T +EP + P+ P + AP +
Sbjct: 454 TTPKEPTPTTPKEPAPTTKE---PA----PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 506
Query: 178 AQLEFLELPPPQEPLEPS 195
A E P P P EP+
Sbjct: 507 APTTTKE-PSPTTPKEPA 523
Score = 36.2 bits (82), Expect = 0.067
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 15/107 (14%)
Query: 76 AQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTV 135
A TP+ P P EP P +P AP PE+ PP T E P E PT
Sbjct: 819 APTTPKETAPTTPKEPAPTTPKKP--------APTTPET-PPPTTSEVSTPTTTKE-PTT 868
Query: 136 LEGQGPANTQDATIAQEPK--NSEPQDP--PNIEKPQEA-PEYQETA 177
+ +T + + PK + P++P P + P PE TA
Sbjct: 869 IHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTA 915
Score = 35.8 bits (81), Expect = 0.087
Identities = 35/142 (24%), Positives = 48/142 (33%), Gaps = 17/142 (11%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQ----KPPEPQDLLPW---EPPAAWELQEAPAA 111
KEP P + KEP K P P++L P EP + + AP
Sbjct: 694 KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTT 753
Query: 112 PESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAP 171
P+ AP +E PT +G P T +EP + P+ P P+E
Sbjct: 754 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAP------TTLKEPAPTTPKKP----APKELA 803
Query: 172 EYQETAAQLEFLELPPPQEPLE 193
+ P P P E
Sbjct: 804 PTTTKGPTSTTSDKPAPTTPKE 825
Score = 33.5 bits (75), Expect = 0.43
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 16/117 (13%)
Query: 59 KEPQKLPEHMNPPAAWEAQKTPEFKEPQ----KPPEPQDLLPWE---PPAAWELQEAPAA 111
KEP P + KEP K P P++L P P + + AP
Sbjct: 763 KEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTT 822
Query: 112 PESLAP-----PATRESQKP-PMAHEI--PTVLEGQGPANTQD-ATIAQEPKNSEPQ 159
P+ AP PA +KP P E PT E P T++ TI + P S P+
Sbjct: 823 PKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPE 879
Score = 32.3 bits (72), Expect = 0.96
Identities = 31/117 (26%), Positives = 43/117 (36%), Gaps = 15/117 (12%)
Query: 79 TPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEG 138
TPE P P +P P E + P PE A P T ++ P E
Sbjct: 628 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA-PTTPKAAAPNTPKE------- 679
Query: 139 QGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPS 195
PA T +EP + P++P + AP + A E P P P +P+
Sbjct: 680 --PA----PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKE-PAPTTPKKPA 729
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 47.8 bits (112), Expect = 2e-05
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 15/160 (9%)
Query: 38 PELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNP---PAAWEAQKTPEFKEPQKPPEPQDL 94
P+ + + + + L S + +EP P P P E+ +P+ +EP P P+
Sbjct: 790 PQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPE-- 847
Query: 95 LPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPK 154
E + EL++ P +P PP E + P E+P P + + EP
Sbjct: 848 ---ESHLSPELEKPPLSPRPEKPP--EEPGQCPAPEELPLF---PPPGEPSLSPLLGEPA 899
Query: 155 NSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEP 194
SEP +PP P+E P L +PP +PL P
Sbjct: 900 LSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPP--DPLPP 937
Score = 43.5 bits (101), Expect = 4e-04
Identities = 42/145 (28%), Positives = 54/145 (37%), Gaps = 14/145 (9%)
Query: 55 SSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPES 114
S + KEP L P Q P+ + P P LLP PP +E+P +P
Sbjct: 403 SMQPKEPGPLQCEAKPLGKAGVQLEPQLEAPLNEEMP--LLP--PP-----EESPLSP-- 451
Query: 115 LAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQ 174
PP + PP A + E + +A P P PP E P P
Sbjct: 452 --PPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPES 509
Query: 175 ETAAQLEFLELPPPQEPLEPSNAQE 199
+ LE L PP+E PS A E
Sbjct: 510 SPFSPLEESPLSPPEES-PPSPALE 533
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 13/179 (7%)
Query: 1 MVEDLAASYIVLKLENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKE 60
M L AS + L +E+ + + + ++ + Q Q P Q+ Q +++ LL A +
Sbjct: 3236 MESSLVASELPLLIEDLLEHEKKELQKKQQLSAQLQ-PAQQQQQQQQQHSLLSAPGPA-Q 3293
Query: 61 PQKLPEHMNPP--AAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPP 118
LP + P A + Q + ++P PQ L+P +PP A A + LAP
Sbjct: 3294 AMSLPHEGSSPSLAGSQQQLSLGLAGARQPGLPQPLMPTQPP-------AHALQQRLAPS 3346
Query: 119 ATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETA 177
S + M G P + ++Q+P + P P KPQ+ Q+ A
Sbjct: 3347 MAMVSNQGHMLSGQHGGQAGLVPQQSSQPVLSQKPMGTMP--PSMCMKPQQLAMQQQLA 3403
Score = 41.2 bits (95), Expect = 0.002
Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 12/168 (7%)
Query: 36 QIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKT-PEFKEPQKPPEPQDL 94
++P +A++ +S + P++ P M+PP EA + P F+E P P++
Sbjct: 560 ELPTSPPPEASRLSPPPEESPMSPPPEESP--MSPPP--EASRLFPPFEESPLSPPPEES 615
Query: 95 LPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEI-PTVLEGQGPANTQDATIAQEP 153
PP A L P PP PP + P + + +++ ++ P
Sbjct: 616 PLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPP 675
Query: 154 KNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQE------PLEPS 195
+ S PP + PE T+ E PP E PLE S
Sbjct: 676 EESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEES 723
Score = 40.8 bits (94), Expect = 0.003
Identities = 52/207 (25%), Positives = 70/207 (33%), Gaps = 8/207 (3%)
Query: 28 EENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMN---PPAAWEAQKTPEFKE 84
+E LQ + L K+ E L +E PE PP PE
Sbjct: 407 KEPGPLQCEAKPLGKAGVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASR 466
Query: 85 PQKPPE--PQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMA--HEIPTVLEGQG 140
PPE P LP + L+E+P +P P + + P + E P +
Sbjct: 467 LSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEES 526
Query: 141 PANTQDATIAQEPKNSEPQDPPNIEKP-QEAPEYQETAAQLEFLELPPPQEPLEPSNAQE 199
P + T P + P PP E P PE T+ E L PP E S E
Sbjct: 527 PPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPE 586
Query: 200 FLELSAAQESLEGLIVVETSAASEFPQ 226
+S E+ E S S P+
Sbjct: 587 ESPMSPPPEASRLFPPFEESPLSPPPE 613
Score = 40.8 bits (94), Expect = 0.003
Identities = 47/178 (26%), Positives = 63/178 (35%), Gaps = 13/178 (7%)
Query: 61 PQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWEL----QEAPAAPE--- 113
P++LP PP A PE PPE + P PP A L +E+P +P
Sbjct: 558 PEELPTSP-PPEASRLSPPPEESPMSPPPEESPMSP--PPEASRLFPPFEESPLSPPPEE 614
Query: 114 ---SLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEA 170
S P A+R S P + P E + + ++ P S PP
Sbjct: 615 SPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPP 674
Query: 171 PEYQETAAQLEFLELPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFPQAP 228
PE T+ E L PP E S E S E + +E S P+ P
Sbjct: 675 PEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPEEP 732
Score = 38.5 bits (88), Expect = 0.013
Identities = 33/138 (23%), Positives = 50/138 (36%), Gaps = 16/138 (11%)
Query: 70 PPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMA 129
PP A + +P F+E P P++L PP A L P PP PP A
Sbjct: 539 PPEA--SPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEA 596
Query: 130 HEI-PTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQ--------- 179
+ P E +++ ++ P+ S PP + P P + +
Sbjct: 597 SRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPE-DSPMSPPPEESPMSPPPEVSRLSP 655
Query: 180 ---LEFLELPPPQEPLEP 194
+ L PP + PL P
Sbjct: 656 LPVVSRLSPPPEESPLSP 673
Score = 38.5 bits (88), Expect = 0.013
Identities = 44/175 (25%), Positives = 65/175 (37%), Gaps = 9/175 (5%)
Query: 61 PQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLL---PWEPPAAWELQEAPAAP---ES 114
P + ++PP P + P PP L P + P + +++PA+P +S
Sbjct: 655 PLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDS 714
Query: 115 LAPPATRESQKPPMAHEIPTVLEGQGP-ANTQDATIAQEPKNSEPQDPPNIEKPQEAPEY 173
L ES P+ E +GP + + P+ EP P E+P +P+
Sbjct: 715 LMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQP 774
Query: 174 QE--TAAQLEFLELPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFPQ 226
+E A E L P E S E L LS E V E S P+
Sbjct: 775 EEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPE 829
Score = 36.2 bits (82), Expect = 0.067
Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 26/150 (17%)
Query: 52 LRKSSEAKEPQKLPEHMNPPAAWEA----QKTPEFKEPQKPPEPQDLLPWEPPAAWELQE 107
L +S + P++ P ++PP +++P + PP P P PP
Sbjct: 489 LEESPLSPPPEESP--LSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPP------- 539
Query: 108 APAAPESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKP 167
A+P L+PP ES P E+PT + +A+ P P PP E P
Sbjct: 540 PEASP--LSPP-FEESPLSPPPEELPT-------SPPPEASRLSPPPEESPMSPPPEESP 589
Query: 168 QE-APEYQETAAQLEFLELPPPQE--PLEP 194
PE E L PP E PL P
Sbjct: 590 MSPPPEASRLFPPFEESPLSPPPEESPLSP 619
Score = 35.4 bits (80), Expect = 0.11
Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 20/155 (12%)
Query: 14 LENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAA 73
LE + WL + +A L P LL++ S A EP + +
Sbjct: 4845 LEGKSPDTGPDWLKQFDAVL----PGYTLKSQLDILSLLKQESPAPEPPTQHSYTYNVSN 4900
Query: 74 WEAQK--TPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHE 131
+ ++ P +EP PP P P PP E L T +PP+
Sbjct: 4901 LDVRQLSAPPPEEPSPPPSPLAPSPASPPT-----------EPLVELPTEPLAEPPVPSP 4949
Query: 132 IPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEK 166
+P P + + A+ P+ E PP ++K
Sbjct: 4950 LPL---ASSPESARPKPRARPPEEGEDSRPPRLKK 4981
Score = 34.7 bits (78), Expect = 0.19
Identities = 40/155 (25%), Positives = 54/155 (34%), Gaps = 42/155 (27%)
Query: 78 KTPE-FKEPQKPP----EPQD----LLPWEPPAAWELQEAPAAPESL-----------AP 117
KTP+ FK P P EPQ L P EPP A L +P + + P
Sbjct: 2322 KTPDVFKAPLTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQP 2381
Query: 118 PATRESQKPP-------MAHEIPTVLEGQGPANTQDATIAQEPKNSEP------------ 158
P T Q PP +P+ + PA+ Q + +Q P P
Sbjct: 2382 PLTPRPQPPPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPSPVT 2441
Query: 159 ---QDPPNIEKPQEAPEYQETAAQLEFLELPPPQE 190
Q P +P P+ ++ A L P P E
Sbjct: 2442 PRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQPPE 2476
Score = 33.9 bits (76), Expect = 0.33
Identities = 37/123 (30%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 88 PPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDA 147
PPEP D EP A + + P+ + + + P+ E + G A Q
Sbjct: 374 PPEPGDTPTDEPDALYVACQGQ--PKGGHVTSMQPKEPGPLQCEAKPL----GKAGVQLE 427
Query: 148 TIAQEPKNSE-PQDPPNIEKP-QEAPEYQETAAQLEFLELPPPQEPLEPSNAQEFLELSA 205
+ P N E P PP E P PE T+ E L PP E L S E L LS
Sbjct: 428 PQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSR 487
Query: 206 AQE 208
E
Sbjct: 488 PLE 490
Score = 29.3 bits (64), Expect = 8.2
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 374 SHTSPATN-LSDLITQCISLEEKPDPNPLGKSSSAEGDGPES-PPAENQPMQAAINCPHI 431
S SP T L +L T+ ++ P P PL S + P + PP E + + P +
Sbjct: 4924 SPASPPTEPLVELPTEPLAEPPVPSPLPLASSPESARPKPRARPPEEGEDSRP----PRL 4979
Query: 432 SEAEWVRWHKGRLCL 446
+ + VRW + RL L
Sbjct: 4980 KKWKGVRWKRLRLLL 4994
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 47.8 bits (112), Expect = 2e-05
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 46/210 (21%)
Query: 15 ENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAW 74
E E+ + + + EE L+ ++ +L+ A E + A P LP + PP
Sbjct: 939 EGELEEEEEEEDEEEEEELE-EVEDLEFGTAGGEVE-----EGAPPPPTLPPALPPP--- 989
Query: 75 EAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPA-------TRESQKP- 126
++P +P+ PEP LL E P E + A AP +LAP A RE + P
Sbjct: 990 ---ESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTAP-TLAPEALPSQGEVEREGESPA 1045
Query: 127 --PMAHEI--------PTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQE- 175
P E+ PT+LE + T+D + +P P + +E EA QE
Sbjct: 1046 AGPPPQELVEEEPSAPPTLLEEE----TEDGSDKVQPPPETPAE-EEMETETEAEALQEK 1100
Query: 176 ----TAAQL-EFLELPP----PQEPLEPSN 196
TAA L +F++ PP P P EP +
Sbjct: 1101 EQDDTAAMLADFIDCPPDDEKPPPPTEPDS 1130
Score = 38.9 bits (89), Expect = 0.010
Identities = 45/170 (26%), Positives = 63/170 (37%), Gaps = 17/170 (10%)
Query: 61 PQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPAT 120
P+ LP PP + TP P PP +P A E +E PAAP L PP
Sbjct: 792 PEGLPPLPPPPPSGA---TPPPIAPTGPPTASPPVP----AKEEPEELPAAPGPLPPPPP 844
Query: 121 RESQKP-----PMAHEIPTVLEGQG--PANTQDATIAQEPKNSEPQDPPNIEKPQEAPEY 173
P P +P G G PA +D T+ + E ++ E+ +E E
Sbjct: 845 PPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEE---EEEEEEEEE 901
Query: 174 QETAAQLEFLELPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASE 223
+E + +F E +E +E E E EG + E E
Sbjct: 902 EEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDE 951
Score = 29.6 bits (65), Expect = 6.3
Identities = 49/208 (23%), Positives = 76/208 (36%), Gaps = 29/208 (13%)
Query: 28 EENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQK 87
EE + + E ++ +E D E +E ++ E E ++ E ++ ++
Sbjct: 894 EEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEE 953
Query: 88 PPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIP-----TVLEGQGPA 142
E +++ E A E A P PPA + PP P +LE + P
Sbjct: 954 EEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPG 1013
Query: 143 NTQD------ATIAQEPKNS------EPQDPPNIEKPQEAPEYQETAAQLEFLE------ 184
++ T+A E S E + P PQE E +E +A LE
Sbjct: 1014 TEEERGADTAPTLAPEALPSQGEVEREGESPAAGPPPQELVE-EEPSAPPTLLEEETEDG 1072
Query: 185 ----LPPPQEPLEPSNAQEFLELSAAQE 208
PPP+ P E E E A QE
Sbjct: 1073 SDKVQPPPETPAEEEMETE-TEAEALQE 1099
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,633,388
Number of Sequences: 37866
Number of extensions: 1262058
Number of successful extensions: 8367
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 648
Number of HSP's that attempted gapping in prelim test: 6151
Number of HSP's gapped (non-prelim): 2093
length of query: 475
length of database: 18,247,518
effective HSP length: 106
effective length of query: 369
effective length of database: 14,233,722
effective search space: 5252243418
effective search space used: 5252243418
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.