TTC39B 15573

Name: TTC39B	Sequence: fasta or formatted (616aa)		NCBI GI: 22749191
Description: tetratricopeptide repeat domain 39B		Referenced in: Tetratricopeptide Domains
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 50 2 C cysteine 2.4 15 2 D aspartate 3.2 20 2 E glutamate 8.6 53 3 F phenylalanine 5.0 31 2 G glycine 4.1 25 2 H histidine 2.1 13 2 I isoleucine 4.5 28 2 K lysine 6.5 40 2 L leucine 14.1 87 2 M methionine 2.1 13 2 N asparagine 3.7 23 2 P proline 2.1 13 1 Q glutamine 5.5 34 2 R arginine 4.2 26 2 S serine 9.3 57 5 T threonine 3.6 22 1 V valine 5.7 35 2 W tryptophan 1.3 8 1 Y tyrosine 3.7 23 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tetratricopeptide repeat domain 39B TTC39A 0.498 tetratricopeptide repeat domain 39A isoform 1 [Homo... TTC39A 0.496 tetratricopeptide repeat domain 39A isoform 2 [Homo... TTC39C 0.146 tetratricopeptide repeat domain 39C isoform 1 [Homo... TTC39C 0.131 tetratricopeptide repeat domain 39C isoform 2 [Homo... TTC7A 0.008 tetratricopeptide repeat domain 7A NPHP3 0.007 nephrocystin 3 VAV3 0.006 vav 3 guanine nucleotide exchange factor isoform 1 ... ADCY10 0.006 adenylate cyclase 10 UBR5 0.006 ubiquitin protein ligase E3 component n-recognin 5 [... LOC730429 0.005 PREDICTED: similar to ubiquitin protein ligase E3 c... LOC730429 0.005 PREDICTED: similar to ubiquitin protein ligase E3 c... IFIT3 0.004 interferon-induced protein with tetratricopeptide re... IFIT3 0.004 interferon-induced protein with tetratricopeptide re... MYST2 0.004 MYST histone acetyltransferase 2 ECT2L 0.004 epithelial cell transforming sequence 2 oncogene-li... GLMN 0.004 glomulin TTC37 0.004 tetratricopeptide repeat domain 37 VPS13A 0.004 vacuolar protein sorting 13A isoform B VPS13A 0.004 vacuolar protein sorting 13A isoform D VPS13A 0.004 vacuolar protein sorting 13A isoform A VPS13A 0.004 vacuolar protein sorting 13A isoform C Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.