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Search of human proteins with 226442751
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226442751 hypothetical protein LOC647309 [Homo sapiens]
(334 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226442751 hypothetical protein LOC647309 [Homo sapiens] 692 0.0
gi|239753662 PREDICTED: hypothetical protein LOC647309 [Homo sap... 205 5e-53
gi|239748317 PREDICTED: hypothetical protein LOC647309 [Homo sap... 205 5e-53
gi|239742215 PREDICTED: hypothetical protein LOC647309 [Homo sap... 205 5e-53
gi|154689780 son of sevenless homolog 2 [Homo sapiens] 36 0.055
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 35 0.094
gi|14165274 golgi-associated microtubule-binding protein HOOK3 [... 34 0.21
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 33 0.27
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 33 0.27
gi|192449449 ubiquitin-conjugating enzyme E2O [Homo sapiens] 33 0.27
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 33 0.27
gi|124249396 coiled-coil domain containing 30 [Homo sapiens] 33 0.47
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 32 0.61
gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens] 32 0.79
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens] 32 0.79
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 32 1.0
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 32 1.0
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 32 1.0
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 32 1.0
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 32 1.0
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 32 1.0
gi|117956403 rabaptin, RAB GTPase binding effector protein 2 [Ho... 32 1.0
gi|45505178 cancer antigen 1 [Homo sapiens] 31 1.4
gi|224586931 protein tyrosine phosphatase, non-receptor type 22 ... 31 1.4
gi|224586929 protein tyrosine phosphatase, non-receptor type 22 ... 31 1.4
gi|148746195 trichohyalin [Homo sapiens] 31 1.4
gi|39930469 brix domain containing 1 [Homo sapiens] 31 1.4
gi|19913410 major vault protein [Homo sapiens] 31 1.8
gi|19913412 major vault protein [Homo sapiens] 31 1.8
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 31 1.8
>gi|226442751 hypothetical protein LOC647309 [Homo sapiens]
Length = 334
Score = 692 bits (1785), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MNTILPCQDQYFVGGQSYNCPYSTTTSESSVDVSTETWVSFWAAGLLDNRELQQAPQAQE 60
MNTILPCQDQYFVGGQSYNCPYSTTTSESSVDVSTETWVSFWAAGLLDNRELQQAPQAQE
Sbjct: 1 MNTILPCQDQYFVGGQSYNCPYSTTTSESSVDVSTETWVSFWAAGLLDNRELQQAPQAQE 60
Query: 61 SFSDSNFPLPDLCSWEEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALV 120
SFSDSNFPLPDLCSWEEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALV
Sbjct: 61 SFSDSNFPLPDLCSWEEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALV 120
Query: 121 KCLEEKAKKLLSSDEFSKAYGKFRKGKRKSKEQRYSPAEIPHPKNAKRNLSSEFANCEEQ 180
KCLEEKAKKLLSSDEFSKAYGKFRKGKRKSKEQRYSPAEIPHPKNAKRNLSSEFANCEEQ
Sbjct: 121 KCLEEKAKKLLSSDEFSKAYGKFRKGKRKSKEQRYSPAEIPHPKNAKRNLSSEFANCEEQ 180
Query: 181 AGPPVDPWVLQTLGLKDLDTIDDTSSANYSALASHPRRVASTFSQFPDDAVDYKNIPRED 240
AGPPVDPWVLQTLGLKDLDTIDDTSSANYSALASHPRRVASTFSQFPDDAVDYKNIPRED
Sbjct: 181 AGPPVDPWVLQTLGLKDLDTIDDTSSANYSALASHPRRVASTFSQFPDDAVDYKNIPRED 240
Query: 241 MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS 300
MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS
Sbjct: 241 MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS 300
Query: 301 PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS 334
PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS
Sbjct: 301 PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS 334
>gi|239753662 PREDICTED: hypothetical protein LOC647309 [Homo
sapiens]
Length = 94
Score = 205 bits (521), Expect = 5e-53
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 241 MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS 300
MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS
Sbjct: 1 MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS 60
Query: 301 PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS 334
PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS
Sbjct: 61 PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS 94
>gi|239748317 PREDICTED: hypothetical protein LOC647309 [Homo
sapiens]
Length = 94
Score = 205 bits (521), Expect = 5e-53
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 241 MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS 300
MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS
Sbjct: 1 MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS 60
Query: 301 PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS 334
PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS
Sbjct: 61 PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS 94
>gi|239742215 PREDICTED: hypothetical protein LOC647309 [Homo
sapiens]
Length = 94
Score = 205 bits (521), Expect = 5e-53
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 241 MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS 300
MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS
Sbjct: 1 MPIDYRGDRTTPLHSTATHGEDFHILSQLSNPPVGLKTLPYYTAHVSPNKTEMAFSTSLS 60
Query: 301 PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS 334
PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS
Sbjct: 61 PHCNVKTHSFHQGQAFVRRDEEGGWKFTWVPKQS 94
>gi|154689780 son of sevenless homolog 2 [Homo sapiens]
Length = 1332
Score = 35.8 bits (81), Expect = 0.055
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 52 LQQAPQAQESFSDSNFPLPDLCSWEEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHL 111
+QQAPQ E FS+ N P W +S+ +Q+ TL EE L + E L
Sbjct: 1 MQQAPQPYEFFSEENSP-----KWRGLLVSALRKVQEQVHPTLSANEESLYYIEELIFQL 55
Query: 112 RQYLNSA---LVKCLEEKAKKLLSS--DEFSKAYGKFRKGKRKSKEQRYSPAEIPHP 163
L A V+ +EE+ +K D+++ A + KRK + P + HP
Sbjct: 56 LNKLCMAQPRTVQDVEERVQKTFPHPIDKWAIADAQSAIEKRKRRNPLLLPVDKIHP 112
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 35.0 bits (79), Expect = 0.094
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 43 AAGLLDNRELQQAPQAQESFSDSNFPLPDLCSWEEAQLSSQLYRNKQLQDTLVQKEEELA 102
++ L + ++L Q +E F + E + S L +N+ L+ T+ +K+ L
Sbjct: 797 SSSLEEQKQLTQLINKKEIFIEKLKERSSKLQEELDKYSQALRKNEILRQTIEEKDRSLG 856
Query: 103 RLHEENNHLRQYL 115
+ EENNHL++ L
Sbjct: 857 SMKEENNHLQEEL 869
Score = 30.4 bits (67), Expect = 2.3
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 80 LSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYL---------NSALVKCLEEKAKKL 130
LSS L KQL + +KE + +L E ++ L++ L N L + +EEK + L
Sbjct: 796 LSSSLEEQKQLTQLINKKEIFIEKLKERSSKLQEELDKYSQALRKNEILRQTIEEKDRSL 855
Query: 131 LSSDEFSKAYGKFRKGKRKSKEQRYSPAEIPHPKNAKRNLSSE 173
S E + + + + ++ R +P P ++ L+SE
Sbjct: 856 GSMKE-ENNHLQEELERLREEQSRTAPVADPKTLDSVTELASE 897
>gi|14165274 golgi-associated microtubule-binding protein HOOK3
[Homo sapiens]
Length = 718
Score = 33.9 bits (76), Expect = 0.21
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 76 EEAQLSSQLYRNKQLQDTLVQK--EEELARLHEENNHLRQYLNSALVKCLEEK-AKKLLS 132
EE Q S Q +K L++K EE L +LHE NN L++ A+++ LE + L
Sbjct: 525 EELQKSLQDQGSKAEDSVLLKKKLEEHLEKLHEANNELQK--KRAIIEDLEPRFNNSSLK 582
Query: 133 SDEFSKAYGKFRKGKRKSKEQRY 155
+E +A K ++ + K E+RY
Sbjct: 583 IEELQEALRK-KEEEMKQMEERY 604
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 33.5 bits (75), Expect = 0.27
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 92 DTLVQKEEELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSDEFSKAYGKFRKGKRKSK 151
D+ ++ + LA L E+ + + L +AL + + K KK E K K K KRK +
Sbjct: 502 DSEEERAQRLAELQEQLKAVHEQL-AALSQPQQNKPKK----KEKDKKEKKKEKHKRKEE 556
Query: 152 --EQRYSPAEIPHPKNAKRNLSSEFANCEEQAGP 183
E + S A+ P PK K+N SS +++ P
Sbjct: 557 VEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAP 590
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 33.5 bits (75), Expect = 0.27
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 92 DTLVQKEEELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSDEFSKAYGKFRKGKRKSK 151
D+ ++ + LA L E+ + + L +AL + + K KK E K K K KRK +
Sbjct: 502 DSEEERAQRLAELQEQLKAVHEQL-AALSQPQQNKPKK----KEKDKKEKKKEKHKRKEE 556
Query: 152 --EQRYSPAEIPHPKNAKRNLSSEFANCEEQAGP 183
E + S A+ P PK K+N SS +++ P
Sbjct: 557 VEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAP 590
>gi|192449449 ubiquitin-conjugating enzyme E2O [Homo sapiens]
Length = 1292
Score = 33.5 bits (75), Expect = 0.27
Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 12/141 (8%)
Query: 111 LRQYLNSALVKCLEEKAKKLLSSDEFSKAYGKFRKGKRKSKEQRYSPAEIPHPKNAKRNL 170
+++ L +V+ + S D + K + K KS+ + SP E P + +
Sbjct: 386 VKRLLKKQVVRIMSCSPDTQCSRDHSMEDPDKKGESKTKSEAESASPEETPDGSASPVEM 445
Query: 171 SSEFANCEEQAGPPVDPWVL------------QTLGLKDLDTIDDTSSANYSALASHPRR 218
E A +AG + P++L Q + D DDTSS SA ++ +
Sbjct: 446 QDEGAEEPHEAGEQLPPFLLKEGRDDRLHSAEQDADDEAADDTDDTSSVTSSASSTTSSQ 505
Query: 219 VASTFSQFPDDAVDYKNIPRE 239
S S+ + KN+ R+
Sbjct: 506 SGSGTSRKKSIPLSIKNLKRK 526
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 33.5 bits (75), Expect = 0.27
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 47 LDNRELQQAPQAQESFSDSNFPLPDLCSWEEAQLSSQLYRNKQLQDTLVQKEEELARLHE 106
LD E QQ Q +++ D+ L E + + ++ L+ L++++EEL R+ E
Sbjct: 497 LDEMEKQQREQVEKNMKDAKDKLES-----EMEDAYHEHQANLLRQDLMRRQEELRRMEE 551
Query: 107 ENNHLRQYLNSALVKCLEEKAKKLLSSDEFSKAYGKFRKGKRKSKEQRYS 156
+N Q ++ EE+ ++ +E + + R+ +E+ YS
Sbjct: 552 LHNQEMQKRKEMQLRQEEERRRR---EEEMMIRQREMEEQMRRQREESYS 598
>gi|124249396 coiled-coil domain containing 30 [Homo sapiens]
Length = 783
Score = 32.7 bits (73), Expect = 0.47
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 51 ELQQAPQAQESFSDSNFPLPDLCSWEEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNH 110
E +Q +ES + +FP EE ++ ++++ + L K EE+ RL EE +H
Sbjct: 147 ERKQKEIPEESVKEGSFPREG--QKEEGSQQNRDMKDEEKEQQLTMKPEEIVRLREELSH 204
Query: 111 LRQYL 115
+ Q L
Sbjct: 205 INQSL 209
>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
Length = 1140
Score = 32.3 bits (72), Expect = 0.61
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 79 QLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSDEFSK 138
Q + R LQ+ L +E ++ L +E HL + + SAL K LE K K++L S
Sbjct: 861 QSKEHICRITDLQEELRHREHHISELDKEVQHLHENI-SALTKELEFKGKEILRIRSESN 919
Query: 139 AYGKFRK---GKRKSKEQRYSPAEIPHPKNAKR 168
+ + KR KE A+ KN R
Sbjct: 920 QQIRLHEQDLNKRLEKELDVMTADHLREKNIMR 952
>gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens]
Length = 3661
Score = 32.0 bits (71), Expect = 0.79
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 75 WEEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSD 134
W+E L L ++ + + Q E+E+ R+ + NN LR+ A+++ EK L+
Sbjct: 1962 WDELWLGVLLQQHMYVLRRIQQLEDEVKRV-QNNNTLRKEEKIAIMR---EKHTALMKPI 2017
Query: 135 EFSKAYGKFRKGKRKSKEQRYSPAEIPHPKNAKRNLSSEFANCEEQAGPPVDP 187
F+ + + +PAE PH K + N N E+ P++P
Sbjct: 2018 VFALEH---------VRSITAAPAETPHEKWFQDNYGDAIENALEKLKTPLNP 2061
>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
Length = 1219
Score = 32.0 bits (71), Expect = 0.79
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 77 EAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSDEF 136
+++ S+ KQL+ + EEEL L E L + L+ K +E+++ DE
Sbjct: 705 QSKFKSEKQNRKQLELKVTSLEEELTDLRVEKESLEKNLSERKKKSAQERSQAEEEIDEI 764
Query: 137 SKAY 140
K+Y
Sbjct: 765 RKSY 768
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 31.6 bits (70), Expect = 1.0
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 47 LDNRELQQAPQAQESFSDSNFPLPDLCSWEEAQLS-SQLYRNKQLQDTLVQKEEELARLH 105
LD L++ A D + + C +E QL ++ + +D +Q+++E+ L
Sbjct: 210 LDLHGLREETSAHIERKDKDITILQ-CRLQELQLEFTETQKLTLKKDKFLQEKDEM--LQ 266
Query: 106 EENNHLRQYLNSALVKCLEEKAKKLLSSDEFSKAYGKFRKGKRKSKEQRYSPAEIPHPKN 165
E L Q NS L+K +E K+ + E + ++ K K E + AE+ KN
Sbjct: 267 ELEKKLTQVQNS-LLKKEKELEKQQCMATELEMTVKEAKQDKSKEAECKALQAEVQKLKN 325
Query: 166 A-------KRNLSSEFANCEEQA 181
+ +R + + A C+E+A
Sbjct: 326 SLEEAKQQERLAAQQAAQCKEEA 348
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 31.6 bits (70), Expect = 1.0
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 47 LDNRELQQAPQAQESFSDSNFPLPDLCSWEEAQLS-SQLYRNKQLQDTLVQKEEELARLH 105
LD L++ A D + + C +E QL ++ + +D +Q+++E+ L
Sbjct: 355 LDLHGLREETSAHIERKDKDITILQ-CRLQELQLEFTETQKLTLKKDKFLQEKDEM--LQ 411
Query: 106 EENNHLRQYLNSALVKCLEEKAKKLLSSDEFSKAYGKFRKGKRKSKEQRYSPAEIPHPKN 165
E L Q NS L+K +E K+ + E + ++ K K E + AE+ KN
Sbjct: 412 ELEKKLTQVQNS-LLKKEKELEKQQCMATELEMTVKEAKQDKSKEAECKALQAEVQKLKN 470
Query: 166 A-------KRNLSSEFANCEEQA 181
+ +R + + A C+E+A
Sbjct: 471 SLEEAKQQERLAAQQAAQCKEEA 493
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 31.6 bits (70), Expect = 1.0
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 80 LSSQLYRNKQLQDTLVQKEEE-LARLHEENNHLRQYLNSALVKCLEEKAKKL 130
L S+ + +QL++ L Q+EEE + RLH++ L L K +EE+ ++
Sbjct: 611 LESKQEKMQQLREKLCQEEEEEILRLHQQKEQSLSSLRERLQKAIEEEEARM 662
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 31.6 bits (70), Expect = 1.0
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 51 ELQQAPQAQESFSDSNFPLPDLCSWEEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNH 110
E+Q APQ Q F DS L D + +Q+ +L + L+ K +L+++H+ +
Sbjct: 1052 EIQAAPQPQLDFQDSQESLSD-------EEYAQMQHLARLAENLISKLNDLSKIHQHVSV 1104
Query: 111 LRQYLNSA 118
L +N++
Sbjct: 1105 LMGSVNAS 1112
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 31.6 bits (70), Expect = 1.0
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 84 LYRNKQLQDTLVQKE-----EELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSDEFSK 138
L R ++LQD L +KE E + EE++ L++ + A ++ L+ + +KLL + S+
Sbjct: 231 LSRLEELQDILAKKELPQDLEGARNMIEEHSQLKKKVIKAPIEDLDLEGQKLLQRIQSSE 290
Query: 139 AYGKFRKGKRKSKEQRYSP 157
++ K G + Q P
Sbjct: 291 SFPKKNSGSGNADLQNLLP 309
>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
Length = 971
Score = 31.6 bits (70), Expect = 1.0
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 79 QLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSDEFSK 138
Q + R LQ+ L +E ++ L +E HL + + SAL K LE K K++L S
Sbjct: 741 QSKEHICRITDLQEELRHREHHISELDKEVQHLHENI-SALTKELEFKGKEILRIRSESN 799
Query: 139 AYGKFRKGKRKSKEQRYSPAEI 160
+ + + K + P +I
Sbjct: 800 QQIRLEEMEEKYLMRESKPEDI 821
>gi|117956403 rabaptin, RAB GTPase binding effector protein 2 [Homo
sapiens]
Length = 569
Score = 31.6 bits (70), Expect = 1.0
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 21/99 (21%)
Query: 57 QAQESFSDSNFPLPDLCSWEEAQLSSQLYRNKQLQDTLVQKEEELARL------------ 104
Q QE + L D S EAQ+++ +Q Q +KE EL RL
Sbjct: 78 QCQEEVASLQAILKDSISSYEAQITALKQERQQQQQDCEEKERELGRLKQLLSRAYPLDS 137
Query: 105 --------HEENNHLRQYLNSALVKCLEEKAKKLLSSDE 135
HE++ LR+ + + K +EE KLL ++E
Sbjct: 138 LEKQMEKAHEDSEKLREIV-LPMEKEIEELKAKLLRAEE 175
>gi|45505178 cancer antigen 1 [Homo sapiens]
Length = 641
Score = 31.2 bits (69), Expect = 1.4
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 76 EEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSDE 135
E Q + + + ++ TL +KEEE+ RL + L + SAL EK + E
Sbjct: 291 EMQQKNKSVSQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQ---EQE 347
Query: 136 FSKAYGKFRKGKRKSKEQR 154
F +F+K ++++ E+R
Sbjct: 348 FLSLQEEFQKLEKENLEER 366
Score = 29.3 bits (64), Expect = 5.2
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 84 LYRNKQLQDT-LVQKEEELARLHEENNHLRQYLNSALVKCL-----------EEKAKKLL 131
L R K+ Q+ + +EE +L +EN RQ L S L K L E+ K +
Sbjct: 337 LKREKEAQEQEFLSLQEEFQKLEKENLEERQKLKSRLEKLLTQVRNLQFMSENERTKNIK 396
Query: 132 SSDEFSKAYGKFRKGKR---KSKEQRYSP----AEI-------------PHPKNAKRNLS 171
+ ++ + K K+ +S+EQ Y P A++ K NL
Sbjct: 397 LQQQINEVKNENAKLKQQVARSEEQNYVPKFETAQLKDQLEEVLKSDITKDTKTTHSNLL 456
Query: 172 SEFANCEEQAGP 183
+ + CEE+ P
Sbjct: 457 PDCSPCEERLNP 468
Score = 28.5 bits (62), Expect = 8.8
Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 4/115 (3%)
Query: 66 NFPLPDLCSWEEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALVKCLEE 125
N +PD WE++ S Q + + ++QK + R E Q N L K ++E
Sbjct: 147 NCEMPD---WEQSAESLQPVQEDMALNEVLQKLKHTNRKQEVRIQELQCSNLYLEKRVKE 203
Query: 126 KAKKLLSSDEFSKAYGKFRKGKRKSKEQRYS-PAEIPHPKNAKRNLSSEFANCEE 179
K+ F K ++ + E +Y E K +NL AN ++
Sbjct: 204 LQMKITKQQVFIDVINKLKENVEELIEDKYKIILEKNDTKKTLQNLEEVLANTQK 258
>gi|224586931 protein tyrosine phosphatase, non-receptor type 22
(lymphoid) isoform 2 [Homo sapiens]
Length = 691
Score = 31.2 bits (69), Expect = 1.4
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 119 LVKCLEEKAKKLLSSDEFSKAYGKFRKGKRKSKEQRYSPAEIPH-PKNAKRN 169
L K L+E K ++ +EF+ + K ++ K K + P + PKN K+N
Sbjct: 7 LQKFLDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKN 58
>gi|224586929 protein tyrosine phosphatase, non-receptor type 22
(lymphoid) isoform 1 [Homo sapiens]
Length = 807
Score = 31.2 bits (69), Expect = 1.4
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 119 LVKCLEEKAKKLLSSDEFSKAYGKFRKGKRKSKEQRYSPAEIPH-PKNAKRN 169
L K L+E K ++ +EF+ + K ++ K K + P + PKN K+N
Sbjct: 7 LQKFLDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKN 58
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 31.2 bits (69), Expect = 1.4
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 76 EEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSDE 135
EE +L +L +QL+ ++ E+L + EE ++ L + EE+ +LL +E
Sbjct: 524 EEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREE 583
Query: 136 FSKAYGKFRKGKRKSKEQRYSPAEIPHPKNAKR 168
+ + ++ + + EQR E+ + +R
Sbjct: 584 -ERRQQRLKREQEERLEQRLKREEVERLEQEER 615
Score = 31.2 bits (69), Expect = 1.4
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 86 RNKQLQDTLVQKEEELARLHEENNHL----RQYLNSALVKCLEEKAKKLLSSDEFSKAYG 141
R + +D L Q+EE+L R E L RQY + L+++ ++LL + ++
Sbjct: 1018 RQYRKKDELQQEEEQLLREEREKRRLQERERQYREE---EELQQEEEQLLGEERETRRRQ 1074
Query: 142 KFRKGKRKSKEQRYSPAEIPHPKNAKRNLSSEFANCEEQ 180
+ + RK +E + ++ + KR C E+
Sbjct: 1075 ELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREE 1113
Score = 30.4 bits (67), Expect = 2.3
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 76 EEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSDE 135
EE QL Q K LQ+ + +EL R E LRQ ++ +E+ +K+L ++
Sbjct: 1696 EEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQEQLR-RQERYRKILEEEQ 1754
Query: 136 FSKAYGKFRKGKRKSKEQRYSPAEIPHPKNAKRNLSSE 173
+ + ++ +R+ +++++ E + ++ L S+
Sbjct: 1755 L-RPEREEQQLRRQERDRKFREEEQLRQEREEQQLRSQ 1791
>gi|39930469 brix domain containing 1 [Homo sapiens]
Length = 306
Score = 31.2 bits (69), Expect = 1.4
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 101 LARLHEENNHLRQYLNSALVKCLEEKAKKLLSSDEFSKAYGKFRKGK--------RKSKE 152
L R H ++ L + L+ + K L+ K KK +S D F YG+ K RK K
Sbjct: 225 LRRTHLASDDLYK-LSMKMPKALKPKKKKNISHDTFGTTYGRIHMQKQDLSKLQTRKMKG 283
Query: 153 QRYSPAE---IPHPKNAKR 168
+ PAE H K +KR
Sbjct: 284 LKKRPAERITEDHEKKSKR 302
>gi|19913410 major vault protein [Homo sapiens]
Length = 893
Score = 30.8 bits (68), Expect = 1.8
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 96 QKEEELARLHEENNHLRQYLNS-ALVKCLEEKAKKLLSSDEFSKAYGKFRKGKRKSKEQR 154
+ E AR+ E + L+ L + AL E + +++ E Y + + SK Q+
Sbjct: 727 ESRAEAARIEGEGSVLQAKLKAQALAIETEAELQRVQKVRELELVYARAQLELEVSKAQQ 786
Query: 155 YSPAEIPHPKNAKRNLSSEFANCEEQAGPPVDPWVLQTLGLKDLDTIDDTSSAN 208
+ E+ K + AGP + +LQ+LGLK D ++ N
Sbjct: 787 LAEVEVKKFKQMTEAIGPSTIRDLAVAGPEMQVKLLQSLGLKSTLITDGSTPIN 840
>gi|19913412 major vault protein [Homo sapiens]
Length = 893
Score = 30.8 bits (68), Expect = 1.8
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 96 QKEEELARLHEENNHLRQYLNS-ALVKCLEEKAKKLLSSDEFSKAYGKFRKGKRKSKEQR 154
+ E AR+ E + L+ L + AL E + +++ E Y + + SK Q+
Sbjct: 727 ESRAEAARIEGEGSVLQAKLKAQALAIETEAELQRVQKVRELELVYARAQLELEVSKAQQ 786
Query: 155 YSPAEIPHPKNAKRNLSSEFANCEEQAGPPVDPWVLQTLGLKDLDTIDDTSSAN 208
+ E+ K + AGP + +LQ+LGLK D ++ N
Sbjct: 787 LAEVEVKKFKQMTEAIGPSTIRDLAVAGPEMQVKLLQSLGLKSTLITDGSTPIN 840
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 30.8 bits (68), Expect = 1.8
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 76 EEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALVKCLEEKAKKLLSSDE 135
EE + +L R ++ + +EEE A+ E N LR +A ++ EE+ K+ +
Sbjct: 825 EERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQ 884
Query: 136 FSKAYGKFRKGKRKS------KEQRYSPAEIPHPKNAKRNLSSEFANCEEQA 181
K + R+ ++++ ++Q+ A++ P ++ S C+ QA
Sbjct: 885 RQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQSQA 936
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,832,043
Number of Sequences: 37866
Number of extensions: 634326
Number of successful extensions: 2326
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 2226
Number of HSP's gapped (non-prelim): 205
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.