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Search of human proteins with 226051591
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226051591 zinc finger protein 414 isoform 2 [Homo sapiens]
(312 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226051591 zinc finger protein 414 isoform 2 [Homo sapiens] 662 0.0
gi|226051634 zinc finger protein 414 isoform 1 [Homo sapiens] 655 0.0
gi|13994287 BTE-binding protein 4 [Homo sapiens] 72 5e-13
gi|21361766 zinc finger protein 692 isoform 2 [Homo sapiens] 59 7e-09
gi|209862873 zinc finger protein 692 isoform 1 [Homo sapiens] 59 7e-09
gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapi... 58 9e-09
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap... 58 9e-09
gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapi... 58 9e-09
gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapi... 58 9e-09
gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapi... 58 9e-09
gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapi... 58 9e-09
gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapi... 58 9e-09
gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapi... 58 9e-09
gi|20162554 Kruppel-like factor 14 [Homo sapiens] 58 1e-08
gi|49087132 sal-like 2 [Homo sapiens] 57 3e-08
gi|22902136 osterix [Homo sapiens] 55 1e-07
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 54 1e-07
gi|239747212 PREDICTED: hypothetical protein XP_002346939 [Homo ... 54 2e-07
gi|98961138 ZXD family zinc finger C isoform 2 [Homo sapiens] 54 2e-07
gi|98961133 ZXD family zinc finger C isoform 1 [Homo sapiens] 54 2e-07
gi|118402590 myosin XV [Homo sapiens] 54 2e-07
gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo ... 54 2e-07
gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo ... 54 2e-07
gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo ... 54 2e-07
gi|41349472 PR domain containing 16 isoform 2 [Homo sapiens] 53 3e-07
gi|41349470 PR domain containing 16 isoform 1 [Homo sapiens] 53 3e-07
gi|110431364 GLIS family zinc finger 2 [Homo sapiens] 53 3e-07
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 52 5e-07
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 52 5e-07
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 52 5e-07
>gi|226051591 zinc finger protein 414 isoform 2 [Homo sapiens]
Length = 312
Score = 662 bits (1708), Expect = 0.0
Identities = 312/312 (100%), Positives = 312/312 (100%)
Query: 1 MEEKPSGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGG 60
MEEKPSGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGG
Sbjct: 1 MEEKPSGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGG 60
Query: 61 AGGMQQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSF 120
AGGMQQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSF
Sbjct: 61 AGGMQQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSF 120
Query: 121 PSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCEN 180
PSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCEN
Sbjct: 121 PSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCEN 180
Query: 181 CLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPPAPERPPEVDPASAPGLPFPLLE 240
CLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPPAPERPPEVDPASAPGLPFPLLE
Sbjct: 181 CLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPPAPERPPEVDPASAPGLPFPLLE 240
Query: 241 PFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPASSAAVWKKSQGAGSSPRRP 300
PFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPASSAAVWKKSQGAGSSPRRP
Sbjct: 241 PFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPASSAAVWKKSQGAGSSPRRP 300
Query: 301 QGGSDAPSGACR 312
QGGSDAPSGACR
Sbjct: 301 QGGSDAPSGACR 312
>gi|226051634 zinc finger protein 414 isoform 1 [Homo sapiens]
Length = 390
Score = 655 bits (1690), Expect = 0.0
Identities = 309/309 (100%), Positives = 309/309 (100%)
Query: 1 MEEKPSGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGG 60
MEEKPSGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGG
Sbjct: 1 MEEKPSGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGG 60
Query: 61 AGGMQQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSF 120
AGGMQQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSF
Sbjct: 61 AGGMQQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSF 120
Query: 121 PSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCEN 180
PSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCEN
Sbjct: 121 PSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCEN 180
Query: 181 CLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPPAPERPPEVDPASAPGLPFPLLE 240
CLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPPAPERPPEVDPASAPGLPFPLLE
Sbjct: 181 CLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPPAPERPPEVDPASAPGLPFPLLE 240
Query: 241 PFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPASSAAVWKKSQGAGSSPRRP 300
PFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPASSAAVWKKSQGAGSSPRRP
Sbjct: 241 PFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPASSAAVWKKSQGAGSSPRRP 300
Query: 301 QGGSDAPSG 309
QGGSDAPSG
Sbjct: 301 QGGSDAPSG 309
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 72.4 bits (176), Expect = 5e-13
Identities = 66/234 (28%), Positives = 79/234 (33%), Gaps = 37/234 (15%)
Query: 25 KEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWE-------RGGAGGMQQGSSPAPDSCQP 77
+E SP P P + PGP AA P + RGG G G+SPA S
Sbjct: 48 REAASPGTPGPPPPPPAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASPASSS--- 104
Query: 78 GPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPT 137
S S S P K C P C ++ L HLRTH
Sbjct: 105 ---------SAASSPSSGRAPGAAPSAAAKSHRCPFPDCAKAYYKSSHLKSHLRTHTGE- 154
Query: 138 QSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHV 197
+ F C C + F EL H + H R F C C RF L
Sbjct: 155 -----RPFACDWQGCDKKFARSDELARHHRTHTGEKR-FSCPLCSKRFTRSDHL------ 202
Query: 198 CAEHAQSPAPPPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTG 251
A+HA+ P L R P + P S G P P P+PAP G
Sbjct: 203 -AKHARRHPGFHPDLLRRPGARSTSPSDSLPCSLAGSP----APSPAPSPAPAG 251
Score = 32.0 bits (71), Expect = 0.72
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 229 ASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPASSAAVWK 288
A++PG P P P P P P+L A L+ R P A PASS++
Sbjct: 50 AASPGTPGPPPPPPAASGPGPGAAAAPHLLAASI-LADLRGGPGAAPGGASPASSSS--- 105
Query: 289 KSQGAGSSPRRPQGGSDAPSGACR 312
A SSP + APS A +
Sbjct: 106 ----AASSPSSGRAPGAAPSAAAK 125
>gi|21361766 zinc finger protein 692 isoform 2 [Homo sapiens]
Length = 519
Score = 58.5 bits (140), Expect = 7e-09
Identities = 54/188 (28%), Positives = 75/188 (39%), Gaps = 16/188 (8%)
Query: 15 TAEPSSSETDKE---VLSP-AVPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSP 70
T P ET + SP AVPA + SS S P P + P R QQ +
Sbjct: 234 TCTPKEGETPPAPAALSSPLAVPALSASSLSSRAPPPAEVRVQPQLSRTPQAA-QQTEAL 292
Query: 71 APDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQI-PCSSPGCCLSFPSVRDLAQH 129
A Q P+P + + P R R +++ PC PGC F + + L H
Sbjct: 293 ASTGSQAQSAPTPAWDE----DTAQIGPKRIRKAAKRELMPCDFPGCGRIFSNRQYLNHH 348
Query: 130 LRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHR 189
+ Q + K F C +C ++F + L H KLH R + CE C FRT
Sbjct: 349 KKY-----QHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH-SDTRDYICEFCARSFRTSS 402
Query: 190 SLFKHLHV 197
+L H +
Sbjct: 403 NLVIHRRI 410
>gi|209862873 zinc finger protein 692 isoform 1 [Homo sapiens]
Length = 524
Score = 58.5 bits (140), Expect = 7e-09
Identities = 54/188 (28%), Positives = 75/188 (39%), Gaps = 16/188 (8%)
Query: 15 TAEPSSSETDKE---VLSP-AVPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSP 70
T P ET + SP AVPA + SS S P P + P R QQ +
Sbjct: 239 TCTPKEGETPPAPAALSSPLAVPALSASSLSSRAPPPAEVRVQPQLSRTPQAA-QQTEAL 297
Query: 71 APDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQI-PCSSPGCCLSFPSVRDLAQH 129
A Q P+P + + P R R +++ PC PGC F + + L H
Sbjct: 298 ASTGSQAQSAPTPAWDE----DTAQIGPKRIRKAAKRELMPCDFPGCGRIFSNRQYLNHH 353
Query: 130 LRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHR 189
+ Q + K F C +C ++F + L H KLH R + CE C FRT
Sbjct: 354 KKY-----QHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH-SDTRDYICEFCARSFRTSS 407
Query: 190 SLFKHLHV 197
+L H +
Sbjct: 408 NLVIHRRI 415
>gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapiens]
Length = 1955
Score = 58.2 bits (139), Expect = 9e-09
Identities = 46/145 (31%), Positives = 57/145 (39%), Gaps = 22/145 (15%)
Query: 148 SALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAP 207
S C+ + V HS L + C+L T R++F E+ P
Sbjct: 1692 SPAECSLELSPSRPCVLHSSLSRRETPI-----CMLPIETERNIF-------ENFAHPPN 1739
Query: 208 PPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAP--FGLS 265
P A PP P PP PA AP P P + PF+ P P+ P +P P P F LS
Sbjct: 1740 ISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLS 1799
Query: 266 --------PPRLRPFLAAAPGPPAS 282
PP L PF P PP S
Sbjct: 1800 VSTSGPPTPPLLPPFPTPLPPPPPS 1824
Score = 35.8 bits (81), Expect = 0.050
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 223 PPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPAS 282
PP + P++ P P P + P +P PAP P P + +PF L P P P PP +
Sbjct: 1737 PPNISPSACPLPPPPPISP-PSPPPAPA-PLAPPPDISPFSLFCPPPSPPSIPLPLPPPT 1794
Query: 283 SAAVWKKSQGAGSSPRRP 300
+ + G + P P
Sbjct: 1795 FFPLSVSTSGPPTPPLLP 1812
Score = 31.6 bits (70), Expect = 0.95
Identities = 33/137 (24%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 32 VPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVSG 91
+P P S S P P A PP P P P P P +
Sbjct: 1747 LPPPPPISPPSPPPAPAPLAPPP-----DISPFSLFCPPPSPPSIPLPLPPPTFFPLSVS 1801
Query: 92 TSEDLRPP------RRRPPPGKQIPCSSP--GCCLSFPSVRDLAQHLRTHCPPTQSLEGK 143
TS PP PPP IPC P LS V T+ P + ++
Sbjct: 1802 TSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1861
Query: 144 LFRCSALSCTETFPSMQ 160
+ + S + +T P +
Sbjct: 1862 MTQLSTTTVCKTDPQRE 1878
>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 58.2 bits (139), Expect = 9e-09
Identities = 46/145 (31%), Positives = 57/145 (39%), Gaps = 22/145 (15%)
Query: 148 SALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAP 207
S C+ + V HS L + C+L T R++F E+ P
Sbjct: 1669 SPAECSLELSPSRPCVLHSSLSRRETPI-----CMLPIETERNIF-------ENFAHPPN 1716
Query: 208 PPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAP--FGLS 265
P A PP P PP PA AP P P + PF+ P P+ P +P P P F LS
Sbjct: 1717 ISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLS 1776
Query: 266 --------PPRLRPFLAAAPGPPAS 282
PP L PF P PP S
Sbjct: 1777 VSTSGPPTPPLLPPFPTPLPPPPPS 1801
Score = 35.8 bits (81), Expect = 0.050
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 223 PPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPAS 282
PP + P++ P P P + P +P PAP P P + +PF L P P P PP +
Sbjct: 1714 PPNISPSACPLPPPPPISP-PSPPPAPA-PLAPPPDISPFSLFCPPPSPPSIPLPLPPPT 1771
Query: 283 SAAVWKKSQGAGSSPRRP 300
+ + G + P P
Sbjct: 1772 FFPLSVSTSGPPTPPLLP 1789
Score = 31.6 bits (70), Expect = 0.95
Identities = 33/137 (24%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 32 VPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVSG 91
+P P S S P P A PP P P P P P +
Sbjct: 1724 LPPPPPISPPSPPPAPAPLAPPP-----DISPFSLFCPPPSPPSIPLPLPPPTFFPLSVS 1778
Query: 92 TSEDLRPP------RRRPPPGKQIPCSSP--GCCLSFPSVRDLAQHLRTHCPPTQSLEGK 143
TS PP PPP IPC P LS V T+ P + ++
Sbjct: 1779 TSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1838
Query: 144 LFRCSALSCTETFPSMQ 160
+ + S + +T P +
Sbjct: 1839 MTQLSTTTVCKTDPQRE 1855
>gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapiens]
Length = 1935
Score = 58.2 bits (139), Expect = 9e-09
Identities = 46/145 (31%), Positives = 57/145 (39%), Gaps = 22/145 (15%)
Query: 148 SALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAP 207
S C+ + V HS L + C+L T R++F E+ P
Sbjct: 1672 SPAECSLELSPSRPCVLHSSLSRRETPI-----CMLPIETERNIF-------ENFAHPPN 1719
Query: 208 PPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAP--FGLS 265
P A PP P PP PA AP P P + PF+ P P+ P +P P P F LS
Sbjct: 1720 ISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLS 1779
Query: 266 --------PPRLRPFLAAAPGPPAS 282
PP L PF P PP S
Sbjct: 1780 VSTSGPPTPPLLPPFPTPLPPPPPS 1804
Score = 35.8 bits (81), Expect = 0.050
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 223 PPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPAS 282
PP + P++ P P P + P +P PAP P P + +PF L P P P PP +
Sbjct: 1717 PPNISPSACPLPPPPPISP-PSPPPAPA-PLAPPPDISPFSLFCPPPSPPSIPLPLPPPT 1774
Query: 283 SAAVWKKSQGAGSSPRRP 300
+ + G + P P
Sbjct: 1775 FFPLSVSTSGPPTPPLLP 1792
Score = 31.6 bits (70), Expect = 0.95
Identities = 33/137 (24%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 32 VPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVSG 91
+P P S S P P A PP P P P P P +
Sbjct: 1727 LPPPPPISPPSPPPAPAPLAPPP-----DISPFSLFCPPPSPPSIPLPLPPPTFFPLSVS 1781
Query: 92 TSEDLRPP------RRRPPPGKQIPCSSP--GCCLSFPSVRDLAQHLRTHCPPTQSLEGK 143
TS PP PPP IPC P LS V T+ P + ++
Sbjct: 1782 TSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1841
Query: 144 LFRCSALSCTETFPSMQ 160
+ + S + +T P +
Sbjct: 1842 MTQLSTTTVCKTDPQRE 1858
>gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapiens]
Length = 1915
Score = 58.2 bits (139), Expect = 9e-09
Identities = 46/145 (31%), Positives = 57/145 (39%), Gaps = 22/145 (15%)
Query: 148 SALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAP 207
S C+ + V HS L + C+L T R++F E+ P
Sbjct: 1652 SPAECSLELSPSRPCVLHSSLSRRETPI-----CMLPIETERNIF-------ENFAHPPN 1699
Query: 208 PPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAP--FGLS 265
P A PP P PP PA AP P P + PF+ P P+ P +P P P F LS
Sbjct: 1700 ISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLS 1759
Query: 266 --------PPRLRPFLAAAPGPPAS 282
PP L PF P PP S
Sbjct: 1760 VSTSGPPTPPLLPPFPTPLPPPPPS 1784
Score = 35.8 bits (81), Expect = 0.050
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 223 PPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPAS 282
PP + P++ P P P + P +P PAP P P + +PF L P P P PP +
Sbjct: 1697 PPNISPSACPLPPPPPISP-PSPPPAPA-PLAPPPDISPFSLFCPPPSPPSIPLPLPPPT 1754
Query: 283 SAAVWKKSQGAGSSPRRP 300
+ + G + P P
Sbjct: 1755 FFPLSVSTSGPPTPPLLP 1772
Score = 31.6 bits (70), Expect = 0.95
Identities = 33/137 (24%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 32 VPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVSG 91
+P P S S P P A PP P P P P P +
Sbjct: 1707 LPPPPPISPPSPPPAPAPLAPPP-----DISPFSLFCPPPSPPSIPLPLPPPTFFPLSVS 1761
Query: 92 TSEDLRPP------RRRPPPGKQIPCSSP--GCCLSFPSVRDLAQHLRTHCPPTQSLEGK 143
TS PP PPP IPC P LS V T+ P + ++
Sbjct: 1762 TSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1821
Query: 144 LFRCSALSCTETFPSMQ 160
+ + S + +T P +
Sbjct: 1822 MTQLSTTTVCKTDPQRE 1838
>gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapiens]
Length = 1952
Score = 58.2 bits (139), Expect = 9e-09
Identities = 46/145 (31%), Positives = 57/145 (39%), Gaps = 22/145 (15%)
Query: 148 SALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAP 207
S C+ + V HS L + C+L T R++F E+ P
Sbjct: 1689 SPAECSLELSPSRPCVLHSSLSRRETPI-----CMLPIETERNIF-------ENFAHPPN 1736
Query: 208 PPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAP--FGLS 265
P A PP P PP PA AP P P + PF+ P P+ P +P P P F LS
Sbjct: 1737 ISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLS 1796
Query: 266 --------PPRLRPFLAAAPGPPAS 282
PP L PF P PP S
Sbjct: 1797 VSTSGPPTPPLLPPFPTPLPPPPPS 1821
Score = 35.8 bits (81), Expect = 0.050
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 223 PPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPAS 282
PP + P++ P P P + P +P PAP P P + +PF L P P P PP +
Sbjct: 1734 PPNISPSACPLPPPPPISP-PSPPPAPA-PLAPPPDISPFSLFCPPPSPPSIPLPLPPPT 1791
Query: 283 SAAVWKKSQGAGSSPRRP 300
+ + G + P P
Sbjct: 1792 FFPLSVSTSGPPTPPLLP 1809
Score = 31.6 bits (70), Expect = 0.95
Identities = 33/137 (24%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 32 VPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVSG 91
+P P S S P P A PP P P P P P +
Sbjct: 1744 LPPPPPISPPSPPPAPAPLAPPP-----DISPFSLFCPPPSPPSIPLPLPPPTFFPLSVS 1798
Query: 92 TSEDLRPP------RRRPPPGKQIPCSSP--GCCLSFPSVRDLAQHLRTHCPPTQSLEGK 143
TS PP PPP IPC P LS V T+ P + ++
Sbjct: 1799 TSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1858
Query: 144 LFRCSALSCTETFPSMQ 160
+ + S + +T P +
Sbjct: 1859 MTQLSTTTVCKTDPQRE 1875
>gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapiens]
Length = 1886
Score = 58.2 bits (139), Expect = 9e-09
Identities = 46/145 (31%), Positives = 57/145 (39%), Gaps = 22/145 (15%)
Query: 148 SALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAP 207
S C+ + V HS L + C+L T R++F E+ P
Sbjct: 1623 SPAECSLELSPSRPCVLHSSLSRRETPI-----CMLPIETERNIF-------ENFAHPPN 1670
Query: 208 PPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAP--FGLS 265
P A PP P PP PA AP P P + PF+ P P+ P +P P P F LS
Sbjct: 1671 ISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLS 1730
Query: 266 --------PPRLRPFLAAAPGPPAS 282
PP L PF P PP S
Sbjct: 1731 VSTSGPPTPPLLPPFPTPLPPPPPS 1755
Score = 35.8 bits (81), Expect = 0.050
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 223 PPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPAS 282
PP + P++ P P P + P +P PAP P P + +PF L P P P PP +
Sbjct: 1668 PPNISPSACPLPPPPPISP-PSPPPAPA-PLAPPPDISPFSLFCPPPSPPSIPLPLPPPT 1725
Query: 283 SAAVWKKSQGAGSSPRRP 300
+ + G + P P
Sbjct: 1726 FFPLSVSTSGPPTPPLLP 1743
Score = 31.6 bits (70), Expect = 0.95
Identities = 33/137 (24%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 32 VPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVSG 91
+P P S S P P A PP P P P P P +
Sbjct: 1678 LPPPPPISPPSPPPAPAPLAPPP-----DISPFSLFCPPPSPPSIPLPLPPPTFFPLSVS 1732
Query: 92 TSEDLRPP------RRRPPPGKQIPCSSP--GCCLSFPSVRDLAQHLRTHCPPTQSLEGK 143
TS PP PPP IPC P LS V T+ P + ++
Sbjct: 1733 TSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1792
Query: 144 LFRCSALSCTETFPSMQ 160
+ + S + +T P +
Sbjct: 1793 MTQLSTTTVCKTDPQRE 1809
>gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapiens]
Length = 1957
Score = 58.2 bits (139), Expect = 9e-09
Identities = 46/145 (31%), Positives = 57/145 (39%), Gaps = 22/145 (15%)
Query: 148 SALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAP 207
S C+ + V HS L + C+L T R++F E+ P
Sbjct: 1694 SPAECSLELSPSRPCVLHSSLSRRETPI-----CMLPIETERNIF-------ENFAHPPN 1741
Query: 208 PPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAP--FGLS 265
P A PP P PP PA AP P P + PF+ P P+ P +P P P F LS
Sbjct: 1742 ISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLS 1801
Query: 266 --------PPRLRPFLAAAPGPPAS 282
PP L PF P PP S
Sbjct: 1802 VSTSGPPTPPLLPPFPTPLPPPPPS 1826
Score = 35.8 bits (81), Expect = 0.050
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 223 PPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPAS 282
PP + P++ P P P + P +P PAP P P + +PF L P P P PP +
Sbjct: 1739 PPNISPSACPLPPPPPISP-PSPPPAPA-PLAPPPDISPFSLFCPPPSPPSIPLPLPPPT 1796
Query: 283 SAAVWKKSQGAGSSPRRP 300
+ + G + P P
Sbjct: 1797 FFPLSVSTSGPPTPPLLP 1814
Score = 31.6 bits (70), Expect = 0.95
Identities = 33/137 (24%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 32 VPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVSG 91
+P P S S P P A PP P P P P P +
Sbjct: 1749 LPPPPPISPPSPPPAPAPLAPPP-----DISPFSLFCPPPSPPSIPLPLPPPTFFPLSVS 1803
Query: 92 TSEDLRPP------RRRPPPGKQIPCSSP--GCCLSFPSVRDLAQHLRTHCPPTQSLEGK 143
TS PP PPP IPC P LS V T+ P + ++
Sbjct: 1804 TSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1863
Query: 144 LFRCSALSCTETFPSMQ 160
+ + S + +T P +
Sbjct: 1864 MTQLSTTTVCKTDPQRE 1880
>gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapiens]
Length = 1962
Score = 58.2 bits (139), Expect = 9e-09
Identities = 46/145 (31%), Positives = 57/145 (39%), Gaps = 22/145 (15%)
Query: 148 SALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAP 207
S C+ + V HS L + C+L T R++F E+ P
Sbjct: 1699 SPAECSLELSPSRPCVLHSSLSRRETPI-----CMLPIETERNIF-------ENFAHPPN 1746
Query: 208 PPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAP--FGLS 265
P A PP P PP PA AP P P + PF+ P P+ P +P P P F LS
Sbjct: 1747 ISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLS 1806
Query: 266 --------PPRLRPFLAAAPGPPAS 282
PP L PF P PP S
Sbjct: 1807 VSTSGPPTPPLLPPFPTPLPPPPPS 1831
Score = 35.8 bits (81), Expect = 0.050
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 223 PPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPAS 282
PP + P++ P P P + P +P PAP P P + +PF L P P P PP +
Sbjct: 1744 PPNISPSACPLPPPPPISP-PSPPPAPA-PLAPPPDISPFSLFCPPPSPPSIPLPLPPPT 1801
Query: 283 SAAVWKKSQGAGSSPRRP 300
+ + G + P P
Sbjct: 1802 FFPLSVSTSGPPTPPLLP 1819
Score = 31.6 bits (70), Expect = 0.95
Identities = 33/137 (24%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 32 VPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVSG 91
+P P S S P P A PP P P P P P +
Sbjct: 1754 LPPPPPISPPSPPPAPAPLAPPP-----DISPFSLFCPPPSPPSIPLPLPPPTFFPLSVS 1808
Query: 92 TSEDLRPP------RRRPPPGKQIPCSSP--GCCLSFPSVRDLAQHLRTHCPPTQSLEGK 143
TS PP PPP IPC P LS V T+ P + ++
Sbjct: 1809 TSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1868
Query: 144 LFRCSALSCTETFPSMQ 160
+ + S + +T P +
Sbjct: 1869 MTQLSTTTVCKTDPQRE 1885
>gi|20162554 Kruppel-like factor 14 [Homo sapiens]
Length = 323
Score = 57.8 bits (138), Expect = 1e-08
Identities = 55/183 (30%), Positives = 66/183 (36%), Gaps = 34/183 (18%)
Query: 18 PSSSETDKEVLSPAVPAAA---PSSSMSEEPGPEQAATPPV-WERGGAGGMQQGSSPAPD 73
P S +T L+PA AAA P SS P A P GG G G+ PAP
Sbjct: 119 PCSVQTPCSELAPASGAAAVCAPESSSDAPAVPSAPAAPGAPAASGGFSGGALGAGPAPA 178
Query: 74 SCQPGPGPSPGLTSIVSGTSEDLRPPRRRP--PPGKQIPCSSPGCCLSFPSVRDLAQHLR 131
+ Q PRRR P K+ C PGC ++ L H R
Sbjct: 179 ADQA---------------------PRRRSVTPAAKRHQCPFPGCTKAYYKSSHLKSHQR 217
Query: 132 THCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSL 191
TH + F C L C + F EL H + H R F C C +F L
Sbjct: 218 THTGE------RPFSCDWLDCDKKFTRSDELARHYRTHTGEKR-FSCPLCPKQFSRSDHL 270
Query: 192 FKH 194
KH
Sbjct: 271 TKH 273
Score = 30.8 bits (68), Expect = 1.6
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 25/71 (35%)
Query: 45 PGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPP 104
P PE A GGA G + G++ P+S PGPGPS G S+ P
Sbjct: 30 PDPEGA--------GGAAGSEVGAAH-PESALPGPGPS-GPASV---------------P 64
Query: 105 PGKQIPCSSPG 115
Q+P SPG
Sbjct: 65 QLPQVPAPSPG 75
>gi|49087132 sal-like 2 [Homo sapiens]
Length = 1007
Score = 56.6 bits (135), Expect = 3e-08
Identities = 59/227 (25%), Positives = 82/227 (36%), Gaps = 25/227 (11%)
Query: 20 SSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGP 79
+S ++EV + A A A S E +Q++ PP P PDS
Sbjct: 805 ASGAEEEVGTVAAAATAGKEMDSNEKTTQQSSLPP--------------PPPPDSLDQPQ 850
Query: 80 GPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQS 139
G + ++ G E +P R P P G S V +L+ P +S
Sbjct: 851 PMEQGSSGVLGGKEEGGKPERSSSPASALTP---EGEATSVTLVEELSLQEAMRKEPGES 907
Query: 140 LEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCA 199
K C C + FPS L H K H K F C C F +L KH+ +
Sbjct: 908 SSRKA--CEV--CGQAFPSQAALEEHQKTHPKEGPLFTCVFCRQGFLERATLKKHMLLAH 963
Query: 200 EHAQSPAPPPPPALDREPPAPERPPEVDPASAPGL-PFPLLEPFTTP 245
Q AP P + P P + ++ GL PFP + T P
Sbjct: 964 HQVQPFAPHGPQNIAALSLVPGCSPSI---TSTGLSPFPRKDDPTIP 1007
Score = 32.3 bits (72), Expect = 0.55
Identities = 30/93 (32%), Positives = 36/93 (38%), Gaps = 12/93 (12%)
Query: 152 CTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAE---HAQSPAPP 208
C + F S L H + H R +KC C RF T +L H H E H Q P
Sbjct: 378 CAKVFGSDSALQIHLRSH-TGERPYKCNVCGNRFTTRGNLKVHFHRHREKYPHVQMNPHP 436
Query: 209 PPPALDRE------PPAPERPPE--VDPASAPG 233
P LD P PPE + A+ PG
Sbjct: 437 VPEHLDYVITSSGLPYGMSVPPEKAEEEAATPG 469
Score = 30.4 bits (67), Expect = 2.1
Identities = 29/111 (26%), Positives = 39/111 (35%), Gaps = 25/111 (22%)
Query: 2 EEKPSGPI-PDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGG 60
E +P G P ++ T + ++ V P P P E PG A GG
Sbjct: 80 EPRPEGHNNPQVMDTEHSNPPDSGSSV--PTDPTWGPERRGEESPGHFLVAATGT-AAGG 136
Query: 61 AGGM-----QQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPG 106
GG+ + G++P P P P P PP PPPG
Sbjct: 137 GGGLILASPKLGATPLPPESTPAPPP----------------PPPPPPPPG 171
>gi|22902136 osterix [Homo sapiens]
Length = 431
Score = 54.7 bits (130), Expect = 1e-07
Identities = 69/263 (26%), Positives = 92/263 (34%), Gaps = 40/263 (15%)
Query: 5 PSGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGGAG-- 62
P+GP L P T +P PA P+ + + PGP+ V++ G
Sbjct: 183 PTGPAQPPLNPQLP----TYPSDFAPLNPAPYPAPHLLQ-PGPQHVLPQDVYKPKAVGNS 237
Query: 63 GMQQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPP--------------RRRPPPGKQ 108
G +GS A G S G +G S P R++P
Sbjct: 238 GQLEGSGGAKPPRGASTGGSGGYGGSGAGRSSCDCPNCQELERLGAAAAGLRKKPIHS-- 295
Query: 109 IPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKL 168
C PGC + L HLR H + F C+ L C + F EL H +
Sbjct: 296 --CHIPGCGKVYGKASHLKAHLRWHTGE------RPFVCNWLFCGKRFTRSDELERHVRT 347
Query: 169 HYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPPAPERPPEVDP 228
H + + F C C RF L KH E P P PPP+ +E E +
Sbjct: 348 HTREKK-FTCLLCSKRFTRSDHLSKHQRTHGE----PGPGPPPSGPKELGEGRSTGEEEA 402
Query: 229 ASAPGLPFPLLEPFTTPAPAPTG 251
+ P P P TP AP G
Sbjct: 403 SQTPR---PSASP-ATPEKAPGG 421
Score = 28.9 bits (63), Expect = 6.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 5 PSGP--IPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQA 50
PSGP + + +T E +S+T + SPA P AP S PEQ+
Sbjct: 385 PSGPKELGEGRSTGEEEASQTPRPSASPATPEKAPGGS------PEQS 426
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 54.3 bits (129), Expect = 1e-07
Identities = 53/204 (25%), Positives = 72/204 (35%), Gaps = 39/204 (19%)
Query: 107 KQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHS 166
K PC PGC F +L H RTH K F+C C F + + H
Sbjct: 331 KPFPCPFPGCGKVFARSENLKIHKRTHTGE------KPFQCEFEGCDRRFANSSDRKKHM 384
Query: 167 KLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPPAPERPPEV 226
+H Y C+ C + SL KH+ V H SP +P
Sbjct: 385 HVHTSDKPYL-CKMCDKSYTHPSSLRKHMKV---HESSP--------QGSESSPAASSGY 432
Query: 227 DPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPASSAAV 286
+ ++ PGL P EP ++ +P AAA A++AAV
Sbjct: 433 ESSTPPGLVSPSAEPQSSSNLSPAA---------------------AAAAAAAAAAAAAV 471
Query: 287 WKKSQGAGSSPRRPQGGSDAPSGA 310
+G GS GGS SG+
Sbjct: 472 SAVHRGGGSGSGGAGGGSGGGSGS 495
Score = 28.5 bits (62), Expect = 8.0
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 151 SCTETFPSMQELVAHSKLHY-----KPNRYFKCENCLLRFRTHRSLFKHL-HVCAEHAQS 204
SC +TF +M ELV H + + + N E C + ++ +K + H+ +
Sbjct: 272 SCNKTFSTMHELVTHVSVEHVGGPEQSNHVCFWEECPREGKPFKAKYKLVNHIRVHTGEK 331
Query: 205 PAPPPPP 211
P P P P
Sbjct: 332 PFPCPFP 338
>gi|239747212 PREDICTED: hypothetical protein XP_002346939 [Homo
sapiens]
Length = 1158
Score = 53.9 bits (128), Expect = 2e-07
Identities = 53/182 (29%), Positives = 72/182 (39%), Gaps = 32/182 (17%)
Query: 114 PGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPN 173
P C +F + L QH H K F C C +++ L H ++H
Sbjct: 270 PDCGKTFATSSGLKQHKHIHSTV------KPFICEV--CHKSYTQFSNLCRHKRMHADCR 321
Query: 174 RYFKCENCLLRFRTHRSLFKHLHVC-AEHAQSP----AP----PPPPALDREPPAPERPP 224
KC++C F T SL KH C ++ +P AP P P +D+ P+ P
Sbjct: 322 TQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFAPGLPLTPSPMMDKAKPS----P 377
Query: 225 EVDPASA------PGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPG 278
++ AS P P P PF+T AP P P L P G+ PP L P P
Sbjct: 378 SLNHASLGFNEYFPSRPHPGSLPFST-AP----PTFPALTPGFPGIFPPSLYPRPPLLPP 432
Query: 279 PP 280
P
Sbjct: 433 TP 434
Score = 42.0 bits (97), Expect = 7e-04
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Query: 87 SIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFR 146
++ G +E+L+P G+ C C FP+ L QH+ H E + ++
Sbjct: 160 ALYEGLAEELKPEGLGGGSGQAHECKD--CERMFPNKYSLEQHMVIHT------EEREYK 211
Query: 147 CSALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPA 206
C C + F L+ H H R F+CENC+ F +L +H+ A++ A
Sbjct: 212 CD--QCPKAFNWKSNLIRHQMSHDSGKR-FECENCVKVFTDPSNLQRHIRSQHVGARAHA 268
Query: 207 PP 208
P
Sbjct: 269 CP 270
Score = 39.7 bits (91), Expect = 0.003
Identities = 34/121 (28%), Positives = 44/121 (36%), Gaps = 17/121 (14%)
Query: 101 RRPPPGKQIPCSSPG--------CCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSC 152
R PPP P G C FP +L +HLRTH +RC C
Sbjct: 834 RSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQP------YRCKY--C 885
Query: 153 TETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPA 212
+F L H + + + FKC C F +L +HL EH +P P
Sbjct: 886 DRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKK-HEHENAPVSQHPGV 944
Query: 213 L 213
L
Sbjct: 945 L 945
>gi|98961138 ZXD family zinc finger C isoform 2 [Homo sapiens]
Length = 710
Score = 53.9 bits (128), Expect = 2e-07
Identities = 59/224 (26%), Positives = 76/224 (33%), Gaps = 56/224 (25%)
Query: 9 IPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGS 68
+P A AE + S+ A P + + + E GP A PP AG + S
Sbjct: 81 VPHGGAAAEAAGSQE-------AEPGSRVNLASRPEQGPSGPAAPPGPGVAPAGAVTISS 133
Query: 69 SPAPDSCQPG-------PGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSFP 121
G PGP+ +G + R P+ P C P C L+F
Sbjct: 134 QDLLVRLDRGVLALSAPPGPA------TAGAAAPRRAPQASGPSTPGYRCPEPQCALAFA 187
Query: 122 SVRDLAQHLRTH----------CPPTQSLEG---------------------KLFRCSAL 150
L HL TH CP LEG + F C
Sbjct: 188 KKHQLKVHLLTHGGGQGRRPFKCP----LEGCGWAFTTSYKLKRHLQSHDKLRPFGCPVG 243
Query: 151 SCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKH 194
C + F ++ L AH K H + FKCE C RF TH L H
Sbjct: 244 GCGKKFTTVYNLKAHMKGH-EQESLFKCEVCAERFPTHAKLSSH 286
Score = 50.8 bits (120), Expect = 2e-06
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 111 CSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHY 170
C GC F +V +L H++ H + LF+C C E FP+ +L +H + H+
Sbjct: 240 CPVGGCGKKFTTVYNLKAHMKGH------EQESLFKCEV--CAERFPTHAKLSSHQRSHF 291
Query: 171 KPNRYFKCE--NCLLRFRTHRSLFKH 194
+P R +KC+ C F T +LF H
Sbjct: 292 EPERPYKCDFPGCEKTFITVSALFSH 317
Score = 40.4 bits (93), Expect = 0.002
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 116 CCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRY 175
C FP+ L+ H R+H P + ++C C +TF ++ L +H++ H++
Sbjct: 273 CAERFPTHAKLSSHQRSHFEPERP-----YKCDFPGCEKTFITVSALFSHNRAHFREQEL 327
Query: 176 FKC 178
F C
Sbjct: 328 FSC 330
Score = 40.4 bits (93), Expect = 0.002
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 111 CSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHY 170
CS PGC + L HLR+H + F C + SC TF SM +L+ H + H
Sbjct: 330 CSFPGCSKQYDKACRLKIHLRSHTGE------RPFICDSDSCGWTFTSMSKLLRHRRKH- 382
Query: 171 KPNRYFKC--ENCLLRFRTHRSLFKH 194
+R F C E C F L H
Sbjct: 383 DDDRRFTCPVEGCGKSFTRAEHLKGH 408
Score = 37.4 bits (85), Expect = 0.017
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 105 PGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVA 164
P + C PGC +F +V L H R H E +LF CS C++ + L
Sbjct: 293 PERPYKCDFPGCEKTFITVSALFSHNRAH-----FREQELFSCSFPGCSKQYDKACRLKI 347
Query: 165 HSKLHYKPNRYFKC--ENCLLRFRTHRSLFKH 194
H + H R F C ++C F + L +H
Sbjct: 348 HLRSH-TGERPFICDSDSCGWTFTSMSKLLRH 378
Score = 37.0 bits (84), Expect = 0.023
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 10/100 (10%)
Query: 100 RRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSM 159
RR+ ++ C GC SF L H TH L K F C C F +
Sbjct: 379 RRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITH------LGTKPFECPVEGCCARFSAR 432
Query: 160 QELVAHSKLHYK----PNRYFKCENCLLRFRTHRSLFKHL 195
L HSK H + P C F + S+ H+
Sbjct: 433 SSLYIHSKKHVQDVGAPKSRCPVSTCNRLFTSKHSMKAHM 472
Score = 28.5 bits (62), Expect = 8.0
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 17/73 (23%)
Query: 247 PAPT--------GPFLPYLNPAPFGLSPPRLRPFLAAAP---GPPASSAAVWKKSQGAGS 295
PAPT GP PAP G SP R R L P GP A + + +G
Sbjct: 8 PAPTARGGQHGGGPGPLRRAPAPLGASPARRRLLLVRGPEDGGPGA------RPGEASGP 61
Query: 296 SPRRPQGGSDAPS 308
SP + SD S
Sbjct: 62 SPPPAEDDSDGDS 74
>gi|98961133 ZXD family zinc finger C isoform 1 [Homo sapiens]
Length = 858
Score = 53.9 bits (128), Expect = 2e-07
Identities = 59/224 (26%), Positives = 76/224 (33%), Gaps = 56/224 (25%)
Query: 9 IPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGS 68
+P A AE + S+ A P + + + E GP A PP AG + S
Sbjct: 81 VPHGGAAAEAAGSQE-------AEPGSRVNLASRPEQGPSGPAAPPGPGVAPAGAVTISS 133
Query: 69 SPAPDSCQPG-------PGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSFP 121
G PGP+ +G + R P+ P C P C L+F
Sbjct: 134 QDLLVRLDRGVLALSAPPGPA------TAGAAAPRRAPQASGPSTPGYRCPEPQCALAFA 187
Query: 122 SVRDLAQHLRTH----------CPPTQSLEG---------------------KLFRCSAL 150
L HL TH CP LEG + F C
Sbjct: 188 KKHQLKVHLLTHGGGQGRRPFKCP----LEGCGWAFTTSYKLKRHLQSHDKLRPFGCPVG 243
Query: 151 SCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKH 194
C + F ++ L AH K H + FKCE C RF TH L H
Sbjct: 244 GCGKKFTTVYNLKAHMKGH-EQESLFKCEVCAERFPTHAKLSSH 286
Score = 50.8 bits (120), Expect = 2e-06
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 111 CSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHY 170
C GC F +V +L H++ H + LF+C C E FP+ +L +H + H+
Sbjct: 240 CPVGGCGKKFTTVYNLKAHMKGH------EQESLFKCEV--CAERFPTHAKLSSHQRSHF 291
Query: 171 KPNRYFKCE--NCLLRFRTHRSLFKH 194
+P R +KC+ C F T +LF H
Sbjct: 292 EPERPYKCDFPGCEKTFITVSALFSH 317
Score = 40.4 bits (93), Expect = 0.002
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 116 CCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRY 175
C FP+ L+ H R+H P + ++C C +TF ++ L +H++ H++
Sbjct: 273 CAERFPTHAKLSSHQRSHFEPERP-----YKCDFPGCEKTFITVSALFSHNRAHFREQEL 327
Query: 176 FKC 178
F C
Sbjct: 328 FSC 330
Score = 40.4 bits (93), Expect = 0.002
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 111 CSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHY 170
CS PGC + L HLR+H + F C + SC TF SM +L+ H + H
Sbjct: 330 CSFPGCSKQYDKACRLKIHLRSHTGE------RPFICDSDSCGWTFTSMSKLLRHRRKH- 382
Query: 171 KPNRYFKC--ENCLLRFRTHRSLFKH 194
+R F C E C F L H
Sbjct: 383 DDDRRFTCPVEGCGKSFTRAEHLKGH 408
Score = 37.4 bits (85), Expect = 0.017
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 105 PGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVA 164
P + C PGC +F +V L H R H E +LF CS C++ + L
Sbjct: 293 PERPYKCDFPGCEKTFITVSALFSHNRAH-----FREQELFSCSFPGCSKQYDKACRLKI 347
Query: 165 HSKLHYKPNRYFKC--ENCLLRFRTHRSLFKH 194
H + H R F C ++C F + L +H
Sbjct: 348 HLRSH-TGERPFICDSDSCGWTFTSMSKLLRH 378
Score = 37.0 bits (84), Expect = 0.023
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 10/100 (10%)
Query: 100 RRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSM 159
RR+ ++ C GC SF L H TH L K F C C F +
Sbjct: 379 RRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITH------LGTKPFECPVEGCCARFSAR 432
Query: 160 QELVAHSKLHYK----PNRYFKCENCLLRFRTHRSLFKHL 195
L HSK H + P C F + S+ H+
Sbjct: 433 SSLYIHSKKHVQDVGAPKSRCPVSTCNRLFTSKHSMKAHM 472
Score = 28.5 bits (62), Expect = 8.0
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 17/73 (23%)
Query: 247 PAPT--------GPFLPYLNPAPFGLSPPRLRPFLAAAP---GPPASSAAVWKKSQGAGS 295
PAPT GP PAP G SP R R L P GP A + + +G
Sbjct: 8 PAPTARGGQHGGGPGPLRRAPAPLGASPARRRLLLVRGPEDGGPGA------RPGEASGP 61
Query: 296 SPRRPQGGSDAPS 308
SP + SD S
Sbjct: 62 SPPPAEDDSDGDS 74
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 53.5 bits (127), Expect = 2e-07
Identities = 79/313 (25%), Positives = 103/313 (32%), Gaps = 53/313 (16%)
Query: 10 PDMLATAEPSSSETDKEVLSPAV--PAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQG 67
PD+LA P S A P A+P +S P + P +
Sbjct: 733 PDLLAFPGPRPSFRGSRRRGAAFGFPGASPRASRRRAWSPLASPQPSL-----------R 781
Query: 68 SSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSFPSVRDLA 127
SSP C P PSP L+ PP RRP ++ P P L
Sbjct: 782 SSPGLGYCSPLAPPSPQLSLRTGPFQPPFLPPARRPRSLQESPAPRRAAGRLGPPGSPLP 841
Query: 128 QHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRT 187
R PP R S+L+ P +L P R K + L R
Sbjct: 842 GSPRPPSPPLGLCHSP--RRSSLNLPSRLPHTWR-----RLSEPPTRAVKPQVRLPFHRP 894
Query: 188 HRSLFKHLHVCAEHAQSP-----------APPPPPALDREPPAPERPPEVDPASAPGLPF 236
R+ EH +SP PP P+ D + P +RPP P A
Sbjct: 895 PRA--GAWRAPLEHRESPREPEDSETPWTVPPLAPSWDVDMPPTQRPPSPWPGGAGSR-- 950
Query: 237 PLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPR------LRPFLAA--APGPPASSAAVWK 288
F+ P P P PFL L P P P R FL PGP +
Sbjct: 951 ---RGFSRPPPVPENPFLQLLGPVPSPTLQPEDPAADMTRVFLGRHHEPGP-------GQ 1000
Query: 289 KSQGAGSSPRRPQ 301
++ AG +P +P+
Sbjct: 1001 LTKSAGPTPEKPE 1013
Score = 41.6 bits (96), Expect = 0.001
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 13/105 (12%)
Query: 204 SPAPPPPPALDREPPAPERPPEVDPASAPGLPFPLLE----PFTTPA---PAPTGPFLPY 256
SP PP P PPAP P + P P+ L P+ PA PAP + +
Sbjct: 662 SPPVPPRPPSSGPPPAPPLSPALSGLPRPASPYGSLRRHPPPWAAPAHVPPAPQASWWAF 721
Query: 257 LNPAPFGLSPPRLRPFLAAAPGPPASSAAVWKKSQG---AGSSPR 298
+ P P + P L A PGP S ++ G+SPR
Sbjct: 722 VEPPAVS---PEVPPDLLAFPGPRPSFRGSRRRGAAFGFPGASPR 763
Score = 40.4 bits (93), Expect = 0.002
Identities = 32/102 (31%), Positives = 38/102 (37%), Gaps = 20/102 (19%)
Query: 205 PAPPPPP------ALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLN 258
PAP P P + PP P RPP P P P L P + P P P+
Sbjct: 645 PAPQPAPRTLSHWSALLSPPVPPRPPSSGPP-----PAPPLSPALSGLPRPASPY----- 694
Query: 259 PAPFGLSPPRLRPFLAAAPGPPASSAAVWKKSQGAGSSPRRP 300
PP P+ A A PPA A+ W + SP P
Sbjct: 695 -GSLRRHPP---PWAAPAHVPPAPQASWWAFVEPPAVSPEVP 732
Score = 36.6 bits (83), Expect = 0.029
Identities = 64/273 (23%), Positives = 84/273 (30%), Gaps = 45/273 (16%)
Query: 47 PEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPG 106
PE+ TP V R + P + QP P ++++S RPP PPP
Sbjct: 619 PEKPGTPIVLRRAQPRARSSNDARRPPAPQPAPRTLSHWSALLSPPVPP-RPPSSGPPPA 677
Query: 107 KQIPCSSPGCCLSFPSVRDLAQH-----LRTHCPPTQSLEGKLFRCSALSCTETFPSMQE 161
+ + G L +H H PP F E P
Sbjct: 678 PPLSPALSGLPRPASPYGSLRRHPPPWAAPAHVPPAPQASWWAFVEPPAVSPEVPPD--- 734
Query: 162 LVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPPAPE 221
LL F R F+ P P A R +P
Sbjct: 735 --------------------LLAFPGPRPSFRGSRRRGAAFGFPG-ASPRASRRRAWSPL 773
Query: 222 RPPEVDPASAPGLPFPLLEPFTTPAP---APTGPFLPYLNPAPFGLSPPRLRPFLAAAPG 278
P+ S+PGL + P P+P TGPF P PF L P R L +P
Sbjct: 774 ASPQPSLRSSPGLGY--CSPLAPPSPQLSLRTGPFQP-----PF-LPPARRPRSLQESPA 825
Query: 279 PPASSAAVWKKSQGAGSSPRRPQGGSDAPSGAC 311
P ++ + SPR P P G C
Sbjct: 826 PRRAAGRLGPPGSPLPGSPRPP----SPPLGLC 854
Score = 28.9 bits (63), Expect = 6.1
Identities = 38/161 (23%), Positives = 50/161 (31%), Gaps = 51/161 (31%)
Query: 202 AQSPAPPPPPALDREPPAPERPP-EVDPAS---APGLPFPL------------------- 238
A++ P P P D PP PP +V P P L +PL
Sbjct: 1025 AETKPPTPAPPKDVTPPKDITPPKDVLPEQKTLRPSLSYPLAACDQTRATWPPWHRWGTL 1084
Query: 239 ------LEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLA----------------AA 276
L P P P P G P F + PR++ +
Sbjct: 1085 PQAAAPLAPIRAPEPLPKGGERRQAAPGRFAVVMPRVQKLSSFQRVGPATLKPQVQPIQD 1144
Query: 277 PGPPASS---AAVWKKSQGAGSSPR---RPQGGSDAPSGAC 311
P P A S + +W ++ G PR PQ P AC
Sbjct: 1145 PKPRACSLRWSCLWLRADAYGPWPRVHTHPQSCHLGPGAAC 1185
>gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo
sapiens]
Length = 218
Score = 53.5 bits (127), Expect = 2e-07
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 208 PPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPP 267
PPPP R+PP P +PP P + P P P P P P P P P+P GL+
Sbjct: 24 PPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPP----KPPSPLGLAQS 79
Query: 268 RLRPFLAAAPGPPASSAAVWKKSQGAGSSP 297
++ F + +P AS AA+ S + P
Sbjct: 80 KVTLFPSISPSSMASLAALASSSLLKSTKP 109
>gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo
sapiens]
Length = 218
Score = 53.5 bits (127), Expect = 2e-07
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 208 PPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPP 267
PPPP R+PP P +PP P + P P P P P P P P P+P GL+
Sbjct: 24 PPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPP----KPPSPLGLAQS 79
Query: 268 RLRPFLAAAPGPPASSAAVWKKSQGAGSSP 297
++ F + +P AS AA+ S + P
Sbjct: 80 KVTLFPSISPSSMASLAALASSSLLKSTKP 109
>gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo
sapiens]
Length = 218
Score = 53.5 bits (127), Expect = 2e-07
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 208 PPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPP 267
PPPP R+PP P +PP P + P P P P P P P P P+P GL+
Sbjct: 24 PPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPP----KPPSPLGLAQS 79
Query: 268 RLRPFLAAAPGPPASSAAVWKKSQGAGSSP 297
++ F + +P AS AA+ S + P
Sbjct: 80 KVTLFPSISPSSMASLAALASSSLLKSTKP 109
>gi|41349472 PR domain containing 16 isoform 2 [Homo sapiens]
Length = 1256
Score = 53.1 bits (126), Expect = 3e-07
Identities = 51/173 (29%), Positives = 70/173 (40%), Gaps = 32/173 (18%)
Query: 114 PGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPN 173
P C +F + L QH H K F C C +++ L H ++H
Sbjct: 369 PDCGKTFATSSGLKQHKHIHSTV------KPFICEV--CHKSYTQFSNLCRHKRMHADCR 420
Query: 174 RYFKCENCLLRFRTHRSLFKHLHVC-AEHAQSP----AP----PPPPALDREPPAPERPP 224
KC++C F T SL KH C ++ +P AP P P +D+ P+ P
Sbjct: 421 TQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFAPGLPLTPSPMMDKAKPS----P 476
Query: 225 EVDPASA------PGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRP 271
++ AS P P P PF+T AP P P L P G+ PP L P
Sbjct: 477 SLNHASLGFNEYFPSRPHPGSLPFST-AP----PTFPALTPGFPGIFPPSLYP 524
Score = 42.0 bits (97), Expect = 7e-04
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Query: 87 SIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFR 146
++ G +E+L+P G+ C C FP+ L QH+ H E + ++
Sbjct: 259 ALYEGLAEELKPEGLGGGSGQAHECKD--CERMFPNKYSLEQHMVIHT------EEREYK 310
Query: 147 CSALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPA 206
C C + F L+ H H R F+CENC+ F +L +H+ A++ A
Sbjct: 311 CD--QCPKAFNWKSNLIRHQMSHDSGKR-FECENCVKVFTDPSNLQRHIRSQHVGARAHA 367
Query: 207 PP 208
P
Sbjct: 368 CP 369
Score = 39.7 bits (91), Expect = 0.003
Identities = 34/121 (28%), Positives = 44/121 (36%), Gaps = 17/121 (14%)
Query: 101 RRPPPGKQIPCSSPG--------CCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSC 152
R PPP P G C FP +L +HLRTH +RC C
Sbjct: 932 RSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQP------YRCKY--C 983
Query: 153 TETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPA 212
+F L H + + + FKC C F +L +HL EH +P P
Sbjct: 984 DRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKK-HEHENAPVSQHPGV 1042
Query: 213 L 213
L
Sbjct: 1043 L 1043
>gi|41349470 PR domain containing 16 isoform 1 [Homo sapiens]
Length = 1275
Score = 53.1 bits (126), Expect = 3e-07
Identities = 51/173 (29%), Positives = 70/173 (40%), Gaps = 32/173 (18%)
Query: 114 PGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLHYKPN 173
P C +F + L QH H K F C C +++ L H ++H
Sbjct: 369 PDCGKTFATSSGLKQHKHIHSTV------KPFICEV--CHKSYTQFSNLCRHKRMHADCR 420
Query: 174 RYFKCENCLLRFRTHRSLFKHLHVC-AEHAQSP----AP----PPPPALDREPPAPERPP 224
KC++C F T SL KH C ++ +P AP P P +D+ P+ P
Sbjct: 421 TQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFAPGLPLTPSPMMDKAKPS----P 476
Query: 225 EVDPASA------PGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRP 271
++ AS P P P PF+T AP P P L P G+ PP L P
Sbjct: 477 SLNHASLGFNEYFPSRPHPGSLPFST-AP----PTFPALTPGFPGIFPPSLYP 524
Score = 42.0 bits (97), Expect = 7e-04
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Query: 87 SIVSGTSEDLRPPRRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFR 146
++ G +E+L+P G+ C C FP+ L QH+ H E + ++
Sbjct: 259 ALYEGLAEELKPEGLGGGSGQAHECKD--CERMFPNKYSLEQHMVIHT------EEREYK 310
Query: 147 CSALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPA 206
C C + F L+ H H R F+CENC+ F +L +H+ A++ A
Sbjct: 311 CD--QCPKAFNWKSNLIRHQMSHDSGKR-FECENCVKVFTDPSNLQRHIRSQHVGARAHA 367
Query: 207 PP 208
P
Sbjct: 368 CP 369
Score = 39.7 bits (91), Expect = 0.003
Identities = 34/121 (28%), Positives = 44/121 (36%), Gaps = 17/121 (14%)
Query: 101 RRPPPGKQIPCSSPG--------CCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSC 152
R PPP P G C FP +L +HLRTH +RC C
Sbjct: 932 RSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQP------YRCKY--C 983
Query: 153 TETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPA 212
+F L H + + + FKC C F +L +HL EH +P P
Sbjct: 984 DRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKK-HEHENAPVSQHPGV 1042
Query: 213 L 213
L
Sbjct: 1043 L 1043
>gi|110431364 GLIS family zinc finger 2 [Homo sapiens]
Length = 524
Score = 53.1 bits (126), Expect = 3e-07
Identities = 64/239 (26%), Positives = 83/239 (34%), Gaps = 61/239 (25%)
Query: 110 PCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQELVAHSKLH 169
P P C SF + +L H R+H K + C C + + + + H++ H
Sbjct: 234 PHRCPTCSKSFSRLENLKIHNRSHTGE------KPYVCPYEGCNKRYSNSSDRFKHTRTH 287
Query: 170 YKPNRYF-KCENCLLRFRTHRSLFKHL--------HVCAEHAQSPAPPPPPALDREPPAP 220
Y Y+ K C R+ SL KH+ H E Q PP PP PAP
Sbjct: 288 YVDKPYYCKMPGCHKRYTDPSSLRKHIKAHGHFVSHEQQELLQLRPPPKPPL-----PAP 342
Query: 221 ERPPEVDPA--------------SAPGLPFPLLE-PFTTPA----------------PAP 249
+ P V A PGLP PL P A P
Sbjct: 343 DGGPYVSGAQIIIPNPAALFGGPGLPGLPLPLAPGPLDLSALACGNGGGSGGGGGMGPGL 402
Query: 250 TGPFLPY------LNPAPFGLSPPRLRPFLAAAPGPPASSAAVWKKSQGAGSSPRRPQG 302
GP LP L P+PFG L P ++ G A + +G GS P R G
Sbjct: 403 PGPVLPLNLAKNPLLPSPFGAGGLGL-PVVSLLAGAAGGKA---EGEKGRGSVPTRALG 457
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 52.4 bits (124), Expect = 5e-07
Identities = 80/319 (25%), Positives = 109/319 (34%), Gaps = 70/319 (21%)
Query: 4 KPSGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGGAGG 63
KP +P +++ SSS + S + +++ SSS +++P P PP +
Sbjct: 86 KPKAEVPSSSSSSSSSSSSS-----SSSSSSSSSSSSQAKKPDPP---LPPAF------- 130
Query: 64 MQQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPP-------PGKQIPCSSPGC 116
G+ P P P P G+ + SG +R P PG P +PG
Sbjct: 131 ---GAPPPPLFDAAFPTPQWGIVDL-SGHQHLFGNLKRGGPASGPGVTPGLGAPAGAPGP 186
Query: 117 CLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALS--------CTETFPSMQELVAHSKL 168
L PS C PT+ +G R L C ++F LV H +
Sbjct: 187 -LPAPSQTPPGPPAAAACDPTKDDKGYFRRLKYLMERRFPCGVCQKSFKQSSHLVQHMLV 245
Query: 169 HYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPPAPERPPEVDP 228
H R ++C C + SL +H C + A PP P P PP
Sbjct: 246 H-SGERPYECGVCGRTYNHVSSLIRHRR-CHKDVPPAAGGPPQ------PGPHLPP---- 293
Query: 229 ASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPASSAAVWK 288
GLP P T AP+ PP A P PA SA
Sbjct: 294 ---LGLPAPAASAATAAAPSTVSS------------GPP-------ATPVAPAPSADGSA 331
Query: 289 KSQGAGSSPRRPQGGSDAP 307
G G P GG D P
Sbjct: 332 APAGVGVPP-PATGGGDGP 349
Score = 48.1 bits (113), Expect = 1e-05
Identities = 78/291 (26%), Positives = 98/291 (33%), Gaps = 47/291 (16%)
Query: 37 PSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQP-----GPGPSPGLTSIVSG 91
P++ +PGP PP+ A ++P+ S P P PS ++ +G
Sbjct: 279 PAAGGPPQPGPH---LPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADGSAAPAG 335
Query: 92 TSEDLRPPRRRPPP---GKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCS 148
PPP G P + P C F L QH H K F CS
Sbjct: 336 VGV--------PPPATGGGDGPFACPLCWKVFKKPSHLHQHQIIHTGE------KPFSCS 381
Query: 149 ALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPP 208
C+++F + L H K H C C FR L KH A HA + A
Sbjct: 382 V--CSKSFNRRESLKRHVKTHSADLLRLPCGICGKAFRDASYLLKHQ---AAHAGAGAGG 436
Query: 209 PPPALD-----REPPAPERPPEVDPASAP---GLPFPLLEPFTTPAPAPTGPFLPYLNPA 260
P P + AP+ A AP P + P P PT P PYL P
Sbjct: 437 PRPVYPCDLCGKSYSAPQSLLRHKAAHAPPAAAAEAPKDGAASAPQPPPTFPPGPYLLPP 496
Query: 261 PFGLSPPRLRPFLAAAPGPPASSAAVWKKSQGA-----GSSPRRPQGGSDA 306
PP AAA AV GA G + GGS A
Sbjct: 497 ----DPPTTDSEKAAAAAAAVVYGAVPVPLLGAHPLLLGGAGTSGAGGSGA 543
Score = 42.4 bits (98), Expect = 5e-04
Identities = 50/199 (25%), Positives = 64/199 (32%), Gaps = 17/199 (8%)
Query: 31 AVPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVS 90
A AAAPS+ S P A P G A G P GP P +
Sbjct: 303 AATAAAPSTVSSGPPATPVAPAPSA--DGSAAPAGVGVPPPATGGGDGPFACPLCWKVFK 360
Query: 91 GTSEDLRPPRRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSAL 150
S L + K CS C SF L +H++TH L R
Sbjct: 361 KPSH-LHQHQIIHTGEKPFSCSV--CSKSFNRRESLKRHVKTH-------SADLLRLPCG 410
Query: 151 SCTETFPSMQELVAHSKLHYK-----PNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSP 205
C + F L+ H H P + C+ C + +SL +H A A +
Sbjct: 411 ICGKAFRDASYLLKHQAAHAGAGAGGPRPVYPCDLCGKSYSAPQSLLRHKAAHAPPAAAA 470
Query: 206 APPPPPALDREPPAPERPP 224
P A P P PP
Sbjct: 471 EAPKDGAASAPQPPPTFPP 489
Score = 34.7 bits (78), Expect = 0.11
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 10/103 (9%)
Query: 93 SEDLRPPRRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSC 152
S L RR + CS+ G + S +L +H R H L + +RC C
Sbjct: 916 SSSLAEHRRLHAVARPQRCSACGKTFRYRS--NLLEHQRLH------LGERAYRCE--HC 965
Query: 153 TETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHL 195
+ F + ++ H + H P +C CL F+ KHL
Sbjct: 966 GKGFFYLSSVLRHQRAHEPPRAELRCPACLKAFKDPGYFRKHL 1008
Score = 33.5 bits (75), Expect = 0.25
Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 16/125 (12%)
Query: 100 RRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQS------LEGKLFRCSALSCT 153
R R Q+PC+ G PS Q C P S +G + CS C
Sbjct: 623 RHRQVHRLQLPCALAGAA-GLPST----QGTPGACGPGASGTSAGPTDGLSYACS--DCG 675
Query: 154 ETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPAL 213
E FP + +++H ++H Y C+ C F +L H V + PP P L
Sbjct: 676 EHFPDLFHVMSHKEVHMAEKPY-GCDACGKTFGFIENLMWHKLVHQAAPERLLPPAPGGL 734
Query: 214 DREPP 218
+PP
Sbjct: 735 --QPP 737
Score = 29.3 bits (64), Expect = 4.7
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
Query: 183 LRFRTHRSLFKHLHVCAEHAQS-------PAPPPPPALDREPPAPERPPE 225
L F H+ F+ + + EHA++ P PPP P PP + PP+
Sbjct: 34 LEFLNHQR-FEPMELYGEHAKAVAALPCAPGPPPQPPPQPPPPQYDYPPQ 82
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 52.4 bits (124), Expect = 5e-07
Identities = 80/319 (25%), Positives = 109/319 (34%), Gaps = 70/319 (21%)
Query: 4 KPSGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGGAGG 63
KP +P +++ SSS + S + +++ SSS +++P P PP +
Sbjct: 86 KPKAEVPSSSSSSSSSSSSS-----SSSSSSSSSSSSQAKKPDPP---LPPAF------- 130
Query: 64 MQQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPP-------PGKQIPCSSPGC 116
G+ P P P P G+ + SG +R P PG P +PG
Sbjct: 131 ---GAPPPPLFDAAFPTPQWGIVDL-SGHQHLFGNLKRGGPASGPGVTPGLGAPAGAPGP 186
Query: 117 CLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALS--------CTETFPSMQELVAHSKL 168
L PS C PT+ +G R L C ++F LV H +
Sbjct: 187 -LPAPSQTPPGPPAAAACDPTKDDKGYFRRLKYLMERRFPCGVCQKSFKQSSHLVQHMLV 245
Query: 169 HYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPPAPERPPEVDP 228
H R ++C C + SL +H C + A PP P P PP
Sbjct: 246 H-SGERPYECGVCGRTYNHVSSLIRHRR-CHKDVPPAAGGPPQ------PGPHLPP---- 293
Query: 229 ASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAAPGPPASSAAVWK 288
GLP P T AP+ PP A P PA SA
Sbjct: 294 ---LGLPAPAASAATAAAPSTVSS------------GPP-------ATPVAPAPSADGSA 331
Query: 289 KSQGAGSSPRRPQGGSDAP 307
G G P GG D P
Sbjct: 332 APAGVGVPP-PATGGGDGP 349
Score = 48.1 bits (113), Expect = 1e-05
Identities = 78/291 (26%), Positives = 98/291 (33%), Gaps = 47/291 (16%)
Query: 37 PSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQP-----GPGPSPGLTSIVSG 91
P++ +PGP PP+ A ++P+ S P P PS ++ +G
Sbjct: 279 PAAGGPPQPGPH---LPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADGSAAPAG 335
Query: 92 TSEDLRPPRRRPPP---GKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCS 148
PPP G P + P C F L QH H K F CS
Sbjct: 336 VGV--------PPPATGGGDGPFACPLCWKVFKKPSHLHQHQIIHTGE------KPFSCS 381
Query: 149 ALSCTETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPP 208
C+++F + L H K H C C FR L KH A HA + A
Sbjct: 382 V--CSKSFNRRESLKRHVKTHSADLLRLPCGICGKAFRDASYLLKHQ---AAHAGAGAGG 436
Query: 209 PPPALD-----REPPAPERPPEVDPASAP---GLPFPLLEPFTTPAPAPTGPFLPYLNPA 260
P P + AP+ A AP P + P P PT P PYL P
Sbjct: 437 PRPVYPCDLCGKSYSAPQSLLRHKAAHAPPAAAAEAPKDGAASAPQPPPTFPPGPYLLPP 496
Query: 261 PFGLSPPRLRPFLAAAPGPPASSAAVWKKSQGA-----GSSPRRPQGGSDA 306
PP AAA AV GA G + GGS A
Sbjct: 497 ----DPPTTDSEKAAAAAAAVVYGAVPVPLLGAHPLLLGGAGTSGAGGSGA 543
Score = 42.4 bits (98), Expect = 5e-04
Identities = 50/199 (25%), Positives = 64/199 (32%), Gaps = 17/199 (8%)
Query: 31 AVPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQQGSSPAPDSCQPGPGPSPGLTSIVS 90
A AAAPS+ S P A P G A G P GP P +
Sbjct: 303 AATAAAPSTVSSGPPATPVAPAPSA--DGSAAPAGVGVPPPATGGGDGPFACPLCWKVFK 360
Query: 91 GTSEDLRPPRRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSAL 150
S L + K CS C SF L +H++TH L R
Sbjct: 361 KPSH-LHQHQIIHTGEKPFSCSV--CSKSFNRRESLKRHVKTH-------SADLLRLPCG 410
Query: 151 SCTETFPSMQELVAHSKLHYK-----PNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSP 205
C + F L+ H H P + C+ C + +SL +H A A +
Sbjct: 411 ICGKAFRDASYLLKHQAAHAGAGAGGPRPVYPCDLCGKSYSAPQSLLRHKAAHAPPAAAA 470
Query: 206 APPPPPALDREPPAPERPP 224
P A P P PP
Sbjct: 471 EAPKDGAASAPQPPPTFPP 489
Score = 34.3 bits (77), Expect = 0.15
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 10/103 (9%)
Query: 93 SEDLRPPRRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSC 152
S L RR + CS+ G + S +L +H R H L + +RC C
Sbjct: 916 SSSLAEHRRLHAVARPQRCSACGKTFRYRS--NLLEHQRLH------LGERAYRCE--HC 965
Query: 153 TETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHL 195
+ F + ++ H + H P +C CL F+ KHL
Sbjct: 966 GKGFFYLSSVLRHQRAHEPPRPELRCPACLKAFKDPGYFRKHL 1008
Score = 33.5 bits (75), Expect = 0.25
Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 16/125 (12%)
Query: 100 RRRPPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQS------LEGKLFRCSALSCT 153
R R Q+PC+ G PS Q C P S +G + CS C
Sbjct: 623 RHRQVHRLQLPCALAGAA-GLPST----QGTPGACGPGASGTSAGPTDGLSYACS--DCG 675
Query: 154 ETFPSMQELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPAL 213
E FP + +++H ++H Y C+ C F +L H V + PP P L
Sbjct: 676 EHFPDLFHVMSHKEVHMAEKPY-GCDACGKTFGFIENLMWHKLVHQAAPERLLPPAPGGL 734
Query: 214 DREPP 218
+PP
Sbjct: 735 --QPP 737
Score = 29.3 bits (64), Expect = 4.7
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
Query: 183 LRFRTHRSLFKHLHVCAEHAQS-------PAPPPPPALDREPPAPERPPE 225
L F H+ F+ + + EHA++ P PPP P PP + PP+
Sbjct: 34 LEFLNHQR-FEPMELYGEHAKAVAALPCAPGPPPQPPPQPPPPQYDYPPQ 82
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 52.4 bits (124), Expect = 5e-07
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 10/111 (9%)
Query: 205 PAPPPPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYL----NPA 260
P PPPPP ++ P P++PP P P P P P P P + PA
Sbjct: 59 PIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPA 118
Query: 261 P-FGLSPPRLRPFLAAAPGPPASSAAVWKKSQGAGSSPRRPQGGSDAPSGA 310
P G +PP +A P P +S A G G +P P + AP GA
Sbjct: 119 PGVGSAPPASS---SAPPATPPTSGA--PPGSGPGPTPTPPPAVTSAPPGA 164
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/126 (30%), Positives = 47/126 (37%), Gaps = 32/126 (25%)
Query: 200 EHAQSPAPP-------------PPPALDREPPAPERPPEVDPASAPGLPFPLLEPFTTPA 246
+ Q P PP P P + PPA P P ++ G P P + P
Sbjct: 95 QQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTS-GAP-----PGSGPG 148
Query: 247 PAPTGPFLPYLNPAPFGLSPPRLRPFLAAAP-------GPPASSAAVWKKSQG--AGSSP 297
P PT P P + AP G PP P + P GPP AAV G G P
Sbjct: 149 PTPTPP--PAVTSAPPGAPPP--TPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGP 204
Query: 298 RRPQGG 303
P+GG
Sbjct: 205 GGPKGG 210
Score = 40.0 bits (92), Expect = 0.003
Identities = 32/102 (31%), Positives = 38/102 (37%), Gaps = 6/102 (5%)
Query: 205 PAPPPPPALDREPPAPERP---PEV--DPASAPGL-PFPLLEPFTTPAPAPTGPFLPYLN 258
P P P P ++PP P + P V P APG+ P PA PT P
Sbjct: 87 PPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSG 146
Query: 259 PAPFGLSPPRLRPFLAAAPGPPASSAAVWKKSQGAGSSPRRP 300
P P PP + AP P S+ V AG P P
Sbjct: 147 PGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPP 188
Score = 38.1 bits (87), Expect = 0.010
Identities = 36/118 (30%), Positives = 42/118 (35%), Gaps = 14/118 (11%)
Query: 7 GPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAAT-------PPVWERG 59
GP P + +A P+SS +P A P S P P A T PP
Sbjct: 116 GPAPGV-GSAPPASSSAPPA--TPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSS 172
Query: 60 GAGGM--QQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPG 115
G Q G P P + PGPGP P G P P PG S+PG
Sbjct: 173 GVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMP--GGPKPGGGPGLSTPG 228
Score = 35.4 bits (80), Expect = 0.066
Identities = 35/123 (28%), Positives = 46/123 (37%), Gaps = 21/123 (17%)
Query: 3 EKPSGPIPDMLATAEPSSSETDKEVLS------PAVPAAAPSSSMSEEPGPEQAATPPVW 56
+ P P P P ++ K V++ P V +A P+SS + ATPP
Sbjct: 86 QPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPP------ATPPT- 138
Query: 57 ERGGAGGMQQGSSPAP----DSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCS 112
G G G +P P S PG P +S V T P PPP +P
Sbjct: 139 -SGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGP---PPPPAAVPGP 194
Query: 113 SPG 115
PG
Sbjct: 195 GPG 197
Score = 31.2 bits (69), Expect = 1.2
Identities = 29/110 (26%), Positives = 35/110 (31%), Gaps = 15/110 (13%)
Query: 6 SGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEEPGPEQAATPPVWERGGAGGMQ 65
SGP P + P + + P P P P Q PP
Sbjct: 54 SGPKPPI--PPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPP--------PP 103
Query: 66 QGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRRPPPGKQIPCSSPG 115
Q SS + PGP P G S ++ PP PPG S PG
Sbjct: 104 QDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPG-----SGPG 148
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,263,859
Number of Sequences: 37866
Number of extensions: 1722343
Number of successful extensions: 26607
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 2035
Number of HSP's that attempted gapping in prelim test: 11532
Number of HSP's gapped (non-prelim): 12090
length of query: 312
length of database: 18,247,518
effective HSP length: 102
effective length of query: 210
effective length of database: 14,385,186
effective search space: 3020889060
effective search space used: 3020889060
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.