Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TATDN2 Sequence: fasta or formatted (761aa) NCBI GI: 225903424
Description:

TatD DNase domain containing 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         52           2
 C cysteine            2.4         18           1
 D aspartate           4.9         37           2
 E glutamate           8.8         67           3
 F phenylalanine       3.5         27           1
 G glycine             5.3         40           2
 H histidine           2.9         22           1
 I isoleucine          2.6         20           2
 K lysine              6.2         47           2
 L leucine             7.2         55           2
 M methionine          1.8         14           1
 N asparagine          2.1         16           2
 P proline             7.6         58           2
 Q glutamine           3.3         25           1
 R arginine            7.4         56           3
 S serine             13.8        105           4
 T threonine           4.5         34           2
 V valine              4.9         37           2
 W tryptophan          1.2          9           1
 Y tyrosine            2.9         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TatD DNase domain containing 2 
TATDN1                0.029   TatD DNase domain containing 1 isoform b 
TATDN1                0.029   TatD DNase domain containing 1 isoform a 
TATDN3                0.016   TatD DNase domain containing 3 isoform 1 
TATDN3                0.015   TatD DNase domain containing 3 isoform 5 
TATDN3                0.014   TatD DNase domain containing 3 isoform 2 
TATDN3                0.014   TatD DNase domain containing 3 isoform 3 
TMEM131               0.012   RW1 protein 
NOLC1                 0.012   nucleolar and coiled-body phosphoprotein 1 
TATDN3                0.011   TatD DNase domain containing 3 isoform 4 
ANKRD11               0.011   ankyrin repeat domain 11 
LOC100133915          0.011   PREDICTED: hypothetical protein 
CEP350                0.011   centrosome-associated protein 350 
DMP1                  0.011   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.011   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
SYDE1                 0.011   synapse defective 1, Rho GTPase, homolog 1 
TNRC18                0.010   trinucleotide repeat containing 18 
HDGF2                 0.010   hepatoma-derived growth factor-related protein 2 iso...
HDGF2                 0.010   hepatoma-derived growth factor-related protein 2 iso...
HNRNPUL2              0.010   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
RERE                  0.009   atrophin-1 like protein isoform b 
RERE                  0.009   atrophin-1 like protein isoform a 
RERE                  0.009   atrophin-1 like protein isoform a 
TNIK                  0.009   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.009   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.009   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.009   TRAF2 and NCK interacting kinase isoform 2 
MARCKS                0.009   myristoylated alanine-rich protein kinase C substra...
NEFH                  0.009   neurofilament, heavy polypeptide 200kDa 
GPATCH8               0.009   G patch domain containing 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press