Guide to the Human Genome
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Name: KIAA1377 Sequence: fasta or formatted (1117aa) NCBI GI: 115387118
Description:

hypothetical protein LOC57562

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         57           3
 C cysteine            1.8         20           1
 D aspartate           3.5         39           2
 E glutamate           8.5         95           3
 F phenylalanine       3.1         35           1
 G glycine             3.5         39           2
 H histidine           2.5         28           2
 I isoleucine          5.7         64           2
 K lysine              8.9         99           2
 L leucine             7.7         86           2
 M methionine          1.0         11           1
 N asparagine          7.3         81           2
 P proline             5.2         58           3
 Q glutamine           6.6         74           3
 R arginine            4.9         55           2
 S serine             11.5        129           3
 T threonine           6.6         74           2
 V valine              4.3         48           1
 W tryptophan          0.6          7           1
 Y tyrosine            1.6         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57562 
KIF20B                0.011   M-phase phosphoprotein 1 
LOC100132733          0.011   PREDICTED: similar to FLJ00310 protein 
DSPP                  0.010   dentin sialophosphoprotein preproprotein 
DST                   0.010   dystonin isoform 4 
DST                   0.010   dystonin isoform 3 
DST                   0.010   dystonin isoform 2 
DST                   0.010   dystonin isoform 1 
DST                   0.010   dystonin isoform 1eA precursor 
WHSC1L1               0.010   WHSC1L1 protein isoform long 
WHSC1L1               0.010   WHSC1L1 protein isoform short 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform b 
ANKRD18A              0.010   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.010   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.010   PREDICTED: ankyrin repeat domain 18A 
CENPF                 0.010   centromere protein F 
CDC2L1                0.009   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.009   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MNS1                  0.009   meiosis-specific nuclear structural 1 
MYH13                 0.009   myosin, heavy polypeptide 13, skeletal muscle [Homo...
TCHH                  0.009   trichohyalin 
GOLGB1                0.009   golgi autoantigen, golgin subfamily b, macrogolgin ...
LOC400352             0.009   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.009   PREDICTED: similar to Putative golgin subfamily A m...
CCDC41                0.009   NY-REN-58 antigen 
CCDC41                0.009   NY-REN-58 antigen 
AKAP9                 0.009   A-kinase anchor protein 9 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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