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Search of human proteins with 223972685
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223972685 IQ motif and ubiquitin domain containing [Homo
sapiens]
(791 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223972685 IQ motif and ubiquitin domain containing [Homo sapi... 1595 0.0
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 40 0.011
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 40 0.011
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 38 0.032
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 38 0.032
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 38 0.032
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 38 0.032
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 38 0.032
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 38 0.042
gi|54792065 SMT3 suppressor of mif two 3 homolog 1 isoform a pre... 37 0.093
gi|4507801 SMT3 suppressor of mif two 3 homolog 1 isoform a prec... 37 0.093
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap... 35 0.21
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap... 35 0.21
gi|54792067 SMT3 suppressor of mif two 3 homolog 1 isoform b pre... 35 0.27
gi|117968621 MACRO domain containing 2 isoform 1 [Homo sapiens] 35 0.35
gi|74325776 MACRO domain containing 2 isoform 2 [Homo sapiens] 35 0.35
gi|164698460 mannosidase, endo-alpha-like isoform 3 [Homo sapiens] 35 0.35
gi|22749033 mannosidase, endo-alpha-like isoform 2 [Homo sapiens] 35 0.35
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 34 0.46
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 34 0.61
gi|21361639 DIPB protein [Homo sapiens] 34 0.61
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 34 0.61
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 34 0.61
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 34 0.61
gi|110349717 titin isoform novex-2 [Homo sapiens] 33 0.79
gi|110349713 titin isoform novex-1 [Homo sapiens] 33 0.79
gi|110349715 titin isoform N2-B [Homo sapiens] 33 0.79
gi|7662088 Rho guanine nucleotide exchange factor (GEF) 12 [Homo... 33 0.79
gi|51093836 hypothetical protein LOC126859 isoform 1 [Homo sapiens] 33 1.0
gi|51093834 hypothetical protein LOC126859 isoform 2 [Homo sapiens] 33 1.0
>gi|223972685 IQ motif and ubiquitin domain containing [Homo
sapiens]
Length = 791
Score = 1595 bits (4130), Expect = 0.0
Identities = 791/791 (100%), Positives = 791/791 (100%)
Query: 1 MSNQQEKYEAQNIVNSTEESDDAFDTVTIPVPSEEPQESDQTEEHESGIEQFSESHAIHV 60
MSNQQEKYEAQNIVNSTEESDDAFDTVTIPVPSEEPQESDQTEEHESGIEQFSESHAIHV
Sbjct: 1 MSNQQEKYEAQNIVNSTEESDDAFDTVTIPVPSEEPQESDQTEEHESGIEQFSESHAIHV 60
Query: 61 EEQSDQSFSSLEPDNEQLMEEVISPRQVSYTPQHHEKQYAMQRPNDDSLAFLDKIKSVKE 120
EEQSDQSFSSLEPDNEQLMEEVISPRQVSYTPQHHEKQYAMQRPNDDSLAFLDKIKSVKE
Sbjct: 61 EEQSDQSFSSLEPDNEQLMEEVISPRQVSYTPQHHEKQYAMQRPNDDSLAFLDKIKSVKE 120
Query: 121 SLQESVEDSLATVKVVLIPVGQEIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIRYSGKI 180
SLQESVEDSLATVKVVLIPVGQEIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIRYSGKI
Sbjct: 121 SLQESVEDSLATVKVVLIPVGQEIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIRYSGKI 180
Query: 181 LKNNETLVQHGVKPQEIVQVEIFSTNPDLYPVRRIDGLTDVSQIITVTVQTGLDQYQQVP 240
LKNNETLVQHGVKPQEIVQVEIFSTNPDLYPVRRIDGLTDVSQIITVTVQTGLDQYQQVP
Sbjct: 181 LKNNETLVQHGVKPQEIVQVEIFSTNPDLYPVRRIDGLTDVSQIITVTVQTGLDQYQQVP 240
Query: 241 VEIVKSDFHKPFLGGFRHKVTGVEYHNAGTQTVPKRIPERLSIFCRDTQTVFQKKNLQQT 300
VEIVKSDFHKPFLGGFRHKVTGVEYHNAGTQTVPKRIPERLSIFCRDTQTVFQKKNLQQT
Sbjct: 241 VEIVKSDFHKPFLGGFRHKVTGVEYHNAGTQTVPKRIPERLSIFCRDTQTVFQKKNLQQT 300
Query: 301 TNTTSTQMTNIGVYVSNMTDKLVTPGKYFSAAEYHAQRLKAVIVIQTYYRQWHAKIFVEN 360
TNTTSTQMTNIGVYVSNMTDKLVTPGKYFSAAEYHAQRLKAVIVIQTYYRQWHAKIFVEN
Sbjct: 301 TNTTSTQMTNIGVYVSNMTDKLVTPGKYFSAAEYHAQRLKAVIVIQTYYRQWHAKIFVEN 360
Query: 361 LRRQKSLRLEWETQQELRKIREKEEWIKLDYHRRHNPKTNEDFEFLYNALEFWRQEELTR 420
LRRQKSLRLEWETQQELRKIREKEEWIKLDYHRRHNPKTNEDFEFLYNALEFWRQEELTR
Sbjct: 361 LRRQKSLRLEWETQQELRKIREKEEWIKLDYHRRHNPKTNEDFEFLYNALEFWRQEELTR 420
Query: 421 INQSFTGAERKAALCELLEKETQIIASIGRHRYIAYMANQEAAIQAFLDKCSAPKIWRTP 480
INQSFTGAERKAALCELLEKETQIIASIGRHRYIAYMANQEAAIQAFLDKCSAPKIWRTP
Sbjct: 421 INQSFTGAERKAALCELLEKETQIIASIGRHRYIAYMANQEAAIQAFLDKCSAPKIWRTP 480
Query: 481 NGKTIEMDTQFTIRARELQNIYKCIMLKNISQDERLDVLLTLKHTVKEHECKLTQEILEL 540
NGKTIEMDTQFTIRARELQNIYKCIMLKNISQDERLDVLLTLKHTVKEHECKLTQEILEL
Sbjct: 481 NGKTIEMDTQFTIRARELQNIYKCIMLKNISQDERLDVLLTLKHTVKEHECKLTQEILEL 540
Query: 541 IDREVDLMMRGVKHHNLEGLRKRIATLFFHYIKTPLFNPEVAKYLKVPQDPLKFYKKIYF 600
IDREVDLMMRGVKHHNLEGLRKRIATLFFHYIKTPLFNPEVAKYLKVPQDPLKFYKKIYF
Sbjct: 541 IDREVDLMMRGVKHHNLEGLRKRIATLFFHYIKTPLFNPEVAKYLKVPQDPLKFYKKIYF 600
Query: 601 CHSCQLYLPSTEFSVSSTSRRIYRCRNCINLQNEAQKRESFLKYKCLLQQLYYTEADYED 660
CHSCQLYLPSTEFSVSSTSRRIYRCRNCINLQNEAQKRESFLKYKCLLQQLYYTEADYED
Sbjct: 601 CHSCQLYLPSTEFSVSSTSRRIYRCRNCINLQNEAQKRESFLKYKCLLQQLYYTEADYED 660
Query: 661 DSKIAFLMQLQDIQYLTENIWASQSVLSACDNLSDLVMVRWNKSLEWSPWNCILLTKDEA 720
DSKIAFLMQLQDIQYLTENIWASQSVLSACDNLSDLVMVRWNKSLEWSPWNCILLTKDEA
Sbjct: 661 DSKIAFLMQLQDIQYLTENIWASQSVLSACDNLSDLVMVRWNKSLEWSPWNCILLTKDEA 720
Query: 721 AAHLKLTSIEEGYERSFIHKIKHKHILAKNYFSQVPVLASFILDDGEIDEIRWKYHSDTT 780
AAHLKLTSIEEGYERSFIHKIKHKHILAKNYFSQVPVLASFILDDGEIDEIRWKYHSDTT
Sbjct: 721 AAHLKLTSIEEGYERSFIHKIKHKHILAKNYFSQVPVLASFILDDGEIDEIRWKYHSDTT 780
Query: 781 PKIIESQRPPH 791
PKIIESQRPPH
Sbjct: 781 PKIIESQRPPH 791
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 39.7 bits (91), Expect = 0.011
Identities = 56/280 (20%), Positives = 114/280 (40%), Gaps = 36/280 (12%)
Query: 4 QQEKYEAQNIVNSTEESDDA--------FDTVTIPVPSEEPQESDQTEEHESGIEQFSES 55
++EK E +++++ ++ D+ + SEE +E ++ EE E + SE
Sbjct: 241 KEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEE 300
Query: 56 HAIHVEEQSDQSFSSLEPDNEQLMEEVISPRQVSYTPQHHEKQYAMQRPNDDSLAFLDKI 115
EE+ +++ S+ E +EQ EEV S ++S + + + + P +
Sbjct: 301 EEEEEEEEEEETGSNSEEASEQSAEEV-SEEEMSEDEERENENHLLVVPESRFDRDSGES 359
Query: 116 KSVKESLQESVEDSLATVKVVLIPVGQEIVIPFKVDTIL-KYLK--------DHFSHLLG 166
+ +E + E S A + +P ++P ++ L KYL + F L
Sbjct: 360 EEAEEEVGEGTPQSSALTEGDYVP-DSPALLPIELKQELPKYLPALQGCRSVEEFQCLNR 418
Query: 167 IPHSVLQIRYSGKILKNNETLVQHGVKPQE------IVQVEIFST-----NPDLYPVRRI 215
I + Y K K +E + +K ++ I + +T +P++ VR I
Sbjct: 419 IEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREI 478
Query: 216 DGLTDVSQIITVTVQTGLDQYQQVPVEIVKSDFHKPFLGG 255
+++ +I V Y + ++ + +PFL G
Sbjct: 479 VVGSNMDKIYIVM------NYVEHDLKSLMETMKQPFLPG 512
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 39.7 bits (91), Expect = 0.011
Identities = 56/280 (20%), Positives = 114/280 (40%), Gaps = 36/280 (12%)
Query: 4 QQEKYEAQNIVNSTEESDDA--------FDTVTIPVPSEEPQESDQTEEHESGIEQFSES 55
++EK E +++++ ++ D+ + SEE +E ++ EE E + SE
Sbjct: 251 KEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEE 310
Query: 56 HAIHVEEQSDQSFSSLEPDNEQLMEEVISPRQVSYTPQHHEKQYAMQRPNDDSLAFLDKI 115
EE+ +++ S+ E +EQ EEV S ++S + + + + P +
Sbjct: 311 EEEEEEEEEEETGSNSEEASEQSAEEV-SEEEMSEDEERENENHLLVVPESRFDRDSGES 369
Query: 116 KSVKESLQESVEDSLATVKVVLIPVGQEIVIPFKVDTIL-KYLK--------DHFSHLLG 166
+ +E + E S A + +P ++P ++ L KYL + F L
Sbjct: 370 EEAEEEVGEGTPQSSALTEGDYVP-DSPALLPIELKQELPKYLPALQGCRSVEEFQCLNR 428
Query: 167 IPHSVLQIRYSGKILKNNETLVQHGVKPQE------IVQVEIFST-----NPDLYPVRRI 215
I + Y K K +E + +K ++ I + +T +P++ VR I
Sbjct: 429 IEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREI 488
Query: 216 DGLTDVSQIITVTVQTGLDQYQQVPVEIVKSDFHKPFLGG 255
+++ +I V Y + ++ + +PFL G
Sbjct: 489 VVGSNMDKIYIVM------NYVEHDLKSLMETMKQPFLPG 522
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 38.1 bits (87), Expect = 0.032
Identities = 54/279 (19%), Positives = 110/279 (39%), Gaps = 34/279 (12%)
Query: 4 QQEKYEAQNIVNSTEESDDA--------FDTVTIPVPSEEPQESDQTEEHESGIEQFSES 55
++EK E +++++ ++ D+ + SEE +E ++ EE E + SE
Sbjct: 242 KEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEE 301
Query: 56 HAIHVEEQSDQSFSSLEPDNEQLMEEVISPRQVSYTPQHHEKQYAMQRPNDDSLAFLDKI 115
EE+ +++ S+ E +EQ EEV S ++S + + + + P +
Sbjct: 302 EEEEEEEEEEETGSNSEEASEQSAEEV-SEEEMSEDEERENENHLLVVPESRFDRDSGES 360
Query: 116 KSVKESLQESVEDSLATVKVVLIPVGQEIVIPFKVDTILKYLK--------DHFSHLLGI 167
+ +E + E S A + +P + + KYL + F L I
Sbjct: 361 EEAEEEVGEGTPQSSALTEGDYVPDSPALSPIELKQELPKYLPALQGCRSVEEFQCLNRI 420
Query: 168 PHSVLQIRYSGKILKNNETLVQHGVKPQE------IVQVEIFST-----NPDLYPVRRID 216
+ Y K K +E + +K ++ I + +T +P++ VR I
Sbjct: 421 EEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIV 480
Query: 217 GLTDVSQIITVTVQTGLDQYQQVPVEIVKSDFHKPFLGG 255
+++ +I V Y + ++ + +PFL G
Sbjct: 481 VGSNMDKIYIVM------NYVEHDLKSLMETMKQPFLPG 513
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 38.1 bits (87), Expect = 0.032
Identities = 54/279 (19%), Positives = 110/279 (39%), Gaps = 34/279 (12%)
Query: 4 QQEKYEAQNIVNSTEESDDA--------FDTVTIPVPSEEPQESDQTEEHESGIEQFSES 55
++EK E +++++ ++ D+ + SEE +E ++ EE E + SE
Sbjct: 251 KEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEE 310
Query: 56 HAIHVEEQSDQSFSSLEPDNEQLMEEVISPRQVSYTPQHHEKQYAMQRPNDDSLAFLDKI 115
EE+ +++ S+ E +EQ EEV S ++S + + + + P +
Sbjct: 311 EEEEEEEEEEETGSNSEEASEQSAEEV-SEEEMSEDEERENENHLLVVPESRFDRDSGES 369
Query: 116 KSVKESLQESVEDSLATVKVVLIPVGQEIVIPFKVDTILKYLK--------DHFSHLLGI 167
+ +E + E S A + +P + + KYL + F L I
Sbjct: 370 EEAEEEVGEGTPQSSALTEGDYVPDSPALSPIELKQELPKYLPALQGCRSVEEFQCLNRI 429
Query: 168 PHSVLQIRYSGKILKNNETLVQHGVKPQE------IVQVEIFST-----NPDLYPVRRID 216
+ Y K K +E + +K ++ I + +T +P++ VR I
Sbjct: 430 EEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIV 489
Query: 217 GLTDVSQIITVTVQTGLDQYQQVPVEIVKSDFHKPFLGG 255
+++ +I V Y + ++ + +PFL G
Sbjct: 490 VGSNMDKIYIVM------NYVEHDLKSLMETMKQPFLPG 522
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 38.1 bits (87), Expect = 0.032
Identities = 54/279 (19%), Positives = 110/279 (39%), Gaps = 34/279 (12%)
Query: 4 QQEKYEAQNIVNSTEESDDA--------FDTVTIPVPSEEPQESDQTEEHESGIEQFSES 55
++EK E +++++ ++ D+ + SEE +E ++ EE E + SE
Sbjct: 219 KEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEE 278
Query: 56 HAIHVEEQSDQSFSSLEPDNEQLMEEVISPRQVSYTPQHHEKQYAMQRPNDDSLAFLDKI 115
EE+ +++ S+ E +EQ EEV S ++S + + + + P +
Sbjct: 279 EEEEEEEEEEETGSNSEEASEQSAEEV-SEEEMSEDEERENENHLLVVPESRFDRDSGES 337
Query: 116 KSVKESLQESVEDSLATVKVVLIPVGQEIVIPFKVDTILKYLK--------DHFSHLLGI 167
+ +E + E S A + +P + + KYL + F L I
Sbjct: 338 EEAEEEVGEGTPQSSALTEGDYVPDSPALSPIELKQELPKYLPALQGCRSVEEFQCLNRI 397
Query: 168 PHSVLQIRYSGKILKNNETLVQHGVKPQE------IVQVEIFST-----NPDLYPVRRID 216
+ Y K K +E + +K ++ I + +T +P++ VR I
Sbjct: 398 EEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIV 457
Query: 217 GLTDVSQIITVTVQTGLDQYQQVPVEIVKSDFHKPFLGG 255
+++ +I V Y + ++ + +PFL G
Sbjct: 458 VGSNMDKIYIVM------NYVEHDLKSLMETMKQPFLPG 490
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 38.1 bits (87), Expect = 0.032
Identities = 54/279 (19%), Positives = 110/279 (39%), Gaps = 34/279 (12%)
Query: 4 QQEKYEAQNIVNSTEESDDA--------FDTVTIPVPSEEPQESDQTEEHESGIEQFSES 55
++EK E +++++ ++ D+ + SEE +E ++ EE E + SE
Sbjct: 208 KEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEE 267
Query: 56 HAIHVEEQSDQSFSSLEPDNEQLMEEVISPRQVSYTPQHHEKQYAMQRPNDDSLAFLDKI 115
EE+ +++ S+ E +EQ EEV S ++S + + + + P +
Sbjct: 268 EEEEEEEEEEETGSNSEEASEQSAEEV-SEEEMSEDEERENENHLLVVPESRFDRDSGES 326
Query: 116 KSVKESLQESVEDSLATVKVVLIPVGQEIVIPFKVDTILKYLK--------DHFSHLLGI 167
+ +E + E S A + +P + + KYL + F L I
Sbjct: 327 EEAEEEVGEGTPQSSALTEGDYVPDSPALSPIELKQELPKYLPALQGCRSVEEFQCLNRI 386
Query: 168 PHSVLQIRYSGKILKNNETLVQHGVKPQE------IVQVEIFST-----NPDLYPVRRID 216
+ Y K K +E + +K ++ I + +T +P++ VR I
Sbjct: 387 EEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIV 446
Query: 217 GLTDVSQIITVTVQTGLDQYQQVPVEIVKSDFHKPFLGG 255
+++ +I V Y + ++ + +PFL G
Sbjct: 447 VGSNMDKIYIVM------NYVEHDLKSLMETMKQPFLPG 479
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 38.1 bits (87), Expect = 0.032
Identities = 54/279 (19%), Positives = 110/279 (39%), Gaps = 34/279 (12%)
Query: 4 QQEKYEAQNIVNSTEESDDA--------FDTVTIPVPSEEPQESDQTEEHESGIEQFSES 55
++EK E +++++ ++ D+ + SEE +E ++ EE E + SE
Sbjct: 253 KEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEE 312
Query: 56 HAIHVEEQSDQSFSSLEPDNEQLMEEVISPRQVSYTPQHHEKQYAMQRPNDDSLAFLDKI 115
EE+ +++ S+ E +EQ EEV S ++S + + + + P +
Sbjct: 313 EEEEEEEEEEETGSNSEEASEQSAEEV-SEEEMSEDEERENENHLLVVPESRFDRDSGES 371
Query: 116 KSVKESLQESVEDSLATVKVVLIPVGQEIVIPFKVDTILKYLK--------DHFSHLLGI 167
+ +E + E S A + +P + + KYL + F L I
Sbjct: 372 EEAEEEVGEGTPQSSALTEGDYVPDSPALSPIELKQELPKYLPALQGCRSVEEFQCLNRI 431
Query: 168 PHSVLQIRYSGKILKNNETLVQHGVKPQE------IVQVEIFST-----NPDLYPVRRID 216
+ Y K K +E + +K ++ I + +T +P++ VR I
Sbjct: 432 EEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIV 491
Query: 217 GLTDVSQIITVTVQTGLDQYQQVPVEIVKSDFHKPFLGG 255
+++ +I V Y + ++ + +PFL G
Sbjct: 492 VGSNMDKIYIVM------NYVEHDLKSLMETMKQPFLPG 524
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
3 [Homo sapiens]
Length = 526
Score = 37.7 bits (86), Expect = 0.042
Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 26/242 (10%)
Query: 33 SEEPQESDQTEEHESGIEQFSESHAIHVEEQSDQSFSSLEPDNEQLMEEVISPRQVSYTP 92
SEE +E ++ EE E + SE EE+ +++ S+ E +EQ EEV S ++S
Sbjct: 34 SEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEV-SEEEMSEDE 92
Query: 93 QHHEKQYAMQRPNDDSLAFLDKIKSVKESLQESVEDSLATVKVVLIPVGQEIVIPFKVDT 152
+ + + + P + + +E + E S A + +P +
Sbjct: 93 ERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALSPIELKQE 152
Query: 153 ILKYLK--------DHFSHLLGIPHSVLQIRYSGKILKNNETLVQHGVKPQE------IV 198
+ KYL + F L I + Y K K +E + +K ++ I
Sbjct: 153 LPKYLPALQGCRSVEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPIT 212
Query: 199 QVEIFST-----NPDLYPVRRIDGLTDVSQIITVTVQTGLDQYQQVPVEIVKSDFHKPFL 253
+ +T +P++ VR I +++ +I V Y + ++ + +PFL
Sbjct: 213 SLREINTILKAQHPNIVTVREIVVGSNMDKIYIVM------NYVEHDLKSLMETMKQPFL 266
Query: 254 GG 255
G
Sbjct: 267 PG 268
>gi|54792065 SMT3 suppressor of mif two 3 homolog 1 isoform a
precursor [Homo sapiens]
Length = 101
Score = 36.6 bits (83), Expect = 0.093
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 116 KSVKESLQESVEDSLATVKVVLIPVGQ---EIVIPFKVDTILKYLKDHFSHLLGIPHSVL 172
K E L + E +KV+ GQ EI K+ T LK LK+ + G+P + L
Sbjct: 7 KPSTEDLGDKKEGEYIKLKVI----GQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSL 62
Query: 173 QIRYSGKILKNNETLVQHGVKPQEIVQV 200
+ + G+ + +N T + G++ +++++V
Sbjct: 63 RFLFEGQRIADNHTPKELGMEEEDVIEV 90
>gi|4507801 SMT3 suppressor of mif two 3 homolog 1 isoform a
precursor [Homo sapiens]
Length = 101
Score = 36.6 bits (83), Expect = 0.093
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 116 KSVKESLQESVEDSLATVKVVLIPVGQ---EIVIPFKVDTILKYLKDHFSHLLGIPHSVL 172
K E L + E +KV+ GQ EI K+ T LK LK+ + G+P + L
Sbjct: 7 KPSTEDLGDKKEGEYIKLKVI----GQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSL 62
Query: 173 QIRYSGKILKNNETLVQHGVKPQEIVQV 200
+ + G+ + +N T + G++ +++++V
Sbjct: 63 RFLFEGQRIADNHTPKELGMEEEDVIEV 90
>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
sapiens]
Length = 858
Score = 35.4 bits (80), Expect = 0.21
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Query: 12 NIVNSTEESDDAFDTVTIPVPSEEPQESDQTEEHESGIEQFSESHAIHVEEQSDQSFSSL 71
+++ +T+ + F PS Q Q EE ES E + E++ Q+F L
Sbjct: 221 DVLEATQPLEQGFLQQLEEGPSSSGQHQPQQEEEESKPEPERSGLSWSNREKAKQAFKEL 280
Query: 72 EPDN--------EQLMEEVISPRQVSYTPQHHEKQ-----YAMQRPNDDSLAFLDKIKSV 118
D EQ M+ V++ + S P+ EK+ Y QR ++ + K
Sbjct: 281 LRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEA 340
Query: 119 KESLQESVE 127
K++LQ +E
Sbjct: 341 KQTLQHFLE 349
>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
sapiens]
Length = 871
Score = 35.4 bits (80), Expect = 0.21
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Query: 12 NIVNSTEESDDAFDTVTIPVPSEEPQESDQTEEHESGIEQFSESHAIHVEEQSDQSFSSL 71
+++ +T+ + F PS Q Q EE ES E + E++ Q+F L
Sbjct: 227 DVLEATQPLEQGFLQQLEEGPSSSGQHQPQQEEEESKPEPERSGLSWSNREKAKQAFKEL 286
Query: 72 EPDN--------EQLMEEVISPRQVSYTPQHHEKQ-----YAMQRPNDDSLAFLDKIKSV 118
D EQ M+ V++ + S P+ EK+ Y QR ++ + K
Sbjct: 287 LRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEA 346
Query: 119 KESLQESVE 127
K++LQ +E
Sbjct: 347 KQTLQHFLE 355
>gi|54792067 SMT3 suppressor of mif two 3 homolog 1 isoform b
precursor [Homo sapiens]
Length = 76
Score = 35.0 bits (79), Expect = 0.27
Identities = 16/58 (27%), Positives = 34/58 (58%)
Query: 143 EIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIRYSGKILKNNETLVQHGVKPQEIVQV 200
EI K+ T LK LK+ + G+P + L+ + G+ + +N T + G++ +++++V
Sbjct: 8 EIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEV 65
>gi|117968621 MACRO domain containing 2 isoform 1 [Homo sapiens]
Length = 425
Score = 34.7 bits (78), Expect = 0.35
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 2 SNQQEKYEAQNIVNSTEESDDA--FDTVTIPVPSEEPQESD------------------- 40
S++ E Q++ E+S DA +TVT+P P+ E D
Sbjct: 258 SDENGPEEKQSVEEMEEQSQDADGVNTVTVPGPASEEAVEDCKDEDFAKDENITKGGEVT 317
Query: 41 ----QTEEHESGIEQFSESHAIHVEEQSDQSFSSLEPDNEQLMEEVI--SPRQVSYTPQH 94
+ ++H G E S + I +E +S S+ E + + VI P + T
Sbjct: 318 DHSVRDQDHPDGQENDSTKNEIKIETESQSSYMETEELSSNQEDAVIVEQPEVIPLTEDQ 377
Query: 95 HEKQYAMQRPNDDS 108
EK+ + P +D+
Sbjct: 378 EEKE-GEKAPGEDT 390
>gi|74325776 MACRO domain containing 2 isoform 2 [Homo sapiens]
Length = 213
Score = 34.7 bits (78), Expect = 0.35
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 2 SNQQEKYEAQNIVNSTEESDDA--FDTVTIPVPSEEPQESD------------------- 40
S++ E Q++ E+S DA +TVT+P P+ E D
Sbjct: 23 SDENGPEEKQSVEEMEEQSQDADGVNTVTVPGPASEEAVEDCKDEDFAKDENITKGGEVT 82
Query: 41 ----QTEEHESGIEQFSESHAIHVEEQSDQSFSSLEPDNEQLMEEVI--SPRQVSYTPQH 94
+ ++H G E S + I +E +S S+ E + + VI P + T
Sbjct: 83 DHSVRDQDHPDGQENDSTKNEIKIETESQSSYMETEELSSNQEDAVIVEQPEVIPLTEDQ 142
Query: 95 HEKQYAMQRPNDDS 108
EK+ + P +D+
Sbjct: 143 EEKE-GEKAPGEDT 155
>gi|164698460 mannosidase, endo-alpha-like isoform 3 [Homo sapiens]
Length = 457
Score = 34.7 bits (78), Expect = 0.35
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Query: 326 GKYFSAAEYHAQRLKAVIVIQTYYRQWH--------------AKIFVENLRRQKSLRLEW 371
GKY+ A A ++ IV T + +WH +++++ L Q SL LE
Sbjct: 381 GKYYETALQAALTVRPEIVSITSFNEWHEGTQIEKAIPKKTPTRLYLDYLPHQPSLYLEL 440
Query: 372 ETQQELRKIREKEEWI 387
+ I+EKE+W+
Sbjct: 441 TRRWAEHFIKEKEQWL 456
>gi|22749033 mannosidase, endo-alpha-like isoform 2 [Homo sapiens]
Length = 235
Score = 34.7 bits (78), Expect = 0.35
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Query: 326 GKYFSAAEYHAQRLKAVIVIQTYYRQWH--------------AKIFVENLRRQKSLRLEW 371
GKY+ A A ++ IV T + +WH +++++ L Q SL LE
Sbjct: 159 GKYYETALQAALTVRPEIVSITSFNEWHEGTQIEKAIPKKTPTRLYLDYLPHQPSLYLEL 218
Query: 372 ETQQELRKIREKEEWI 387
+ I+EKE+W+
Sbjct: 219 TRRWAEHFIKEKEQWL 234
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 34.3 bits (77), Expect = 0.46
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 19/128 (14%)
Query: 359 ENLRRQKSLRLEWETQQELRKIREKEE--------WIKLDYHRRHNPKTNEDFEFLYNAL 410
E + Q+ +R + E +QE KIRE+E+ W + + R K E +
Sbjct: 398 EKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEK------ 451
Query: 411 EFWRQEELTRINQSFTGAERKAALCELLEKETQIIASIGRHRYIAYMANQEAAIQAFLDK 470
+ WRQEE + E++ E+ +E +I R M QE I+
Sbjct: 452 KMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIHEQEEIWRQKEKMHEQEEKIRK---- 507
Query: 471 CSAPKIWR 478
K+WR
Sbjct: 508 -QEEKVWR 514
Score = 30.4 bits (67), Expect = 6.7
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 350 RQWHAKIFVENLRRQKSLRLEWETQQELR----KIREKEEWIKLDYHRRHNPKTNEDFEF 405
RQ KI + R+++ ++ W ++++R KIRE+E+ + + H + + E
Sbjct: 413 RQEEEKIREQEKRQEQEAKM-WRQEEKIREQEEKIREQEKKMWRQEEKIHEQEKIREEEK 471
Query: 406 LYNALEFWRQEE 417
E WRQEE
Sbjct: 472 RQEQEEMWRQEE 483
Score = 30.0 bits (66), Expect = 8.7
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 18/72 (25%)
Query: 359 ENLRRQKSLRLEWETQQELR----------KIREKEEWIKLDYHRRHNPKTNEDFEFLYN 408
E +RRQ+ + WE ++++R KIRE+EE R+ K E +
Sbjct: 377 EKMRRQEEMM--WEKEEKIRELEEKMHEQEKIREQEE------KRQEEEKIREQEKRQEQ 428
Query: 409 ALEFWRQEELTR 420
+ WRQEE R
Sbjct: 429 EAKMWRQEEKIR 440
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 33.9 bits (76), Expect = 0.61
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 359 ENLRRQKSLRLEWETQQELRKIREKEE--------WIKLDYHRRHNPKTNEDFEFLYNAL 410
E + Q+ +R + E +QE KIRE+E+ W + + R K E E
Sbjct: 445 EKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEE------ 498
Query: 411 EFWRQEELTRINQSFTGAERKAALCELLEKETQI 444
+ WRQEE + E++ E+ +E +I
Sbjct: 499 KMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKI 532
Score = 32.7 bits (73), Expect = 1.3
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 350 RQWHAKIFVENLRRQKSLRLEWETQQELR----KIREKEEWIKLDYHRRHNPKTNEDFEF 405
RQ KI + R+++ ++ W ++++R KIRE+EE + + H + + E
Sbjct: 460 RQEEEKIREQEKRQEQEAKM-WRQEEKIREQEEKIREQEEKMWRQEEKIHEQEKIREEEK 518
Query: 406 LYNALEFWRQEELTR 420
E WRQEE R
Sbjct: 519 RQEQEEMWRQEEKIR 533
Score = 30.0 bits (66), Expect = 8.7
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 18/72 (25%)
Query: 359 ENLRRQKSLRLEWETQQELR----------KIREKEEWIKLDYHRRHNPKTNEDFEFLYN 408
E +RRQ+ + WE ++++R KIRE+EE R+ K E +
Sbjct: 424 EKMRRQEEMM--WEKEEKIRELEEKMHEQEKIREQEE------KRQEEEKIREQEKRQEQ 475
Query: 409 ALEFWRQEELTR 420
+ WRQEE R
Sbjct: 476 EAKMWRQEEKIR 487
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 33.9 bits (76), Expect = 0.61
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 29 IPVPSEEPQESDQTEEHESGIEQFSESHAIHVEEQSDQSFSSLEPDNEQLMEE 81
+ V E ES+ EE ES E SE + EE D+S E D+E+ ME+
Sbjct: 83 VKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMED 135
Score = 33.9 bits (76), Expect = 0.61
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 2 SNQQEKYEAQNIVNSTEESDDAFDTVTIPVPSEEPQESDQTEEHESGIEQFSESHAIHVE 61
S +E+ E++ + EES+D D SEE E + +E ES E+ ++
Sbjct: 99 SESEEESESEEESETEEESEDESDE-----ESEEDSEEEMEDEQESEAEEDNQEEGESEA 153
Query: 62 EQSDQSFSSLEPDNEQLMEEV 82
E ++ S +P+ E E V
Sbjct: 154 EGETEAESEFDPEIEMEAERV 174
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 33.9 bits (76), Expect = 0.61
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 13/76 (17%)
Query: 40 DQTEEHESGIEQFSESHAIHVEEQSDQ-------------SFSSLEPDNEQLMEEVISPR 86
++T+ HE+ I+ + HA +EE S+Q + LE DN++L EV +
Sbjct: 1185 EETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLEKNKQGLETDNKELACEVKVLQ 1244
Query: 87 QVSYTPQHHEKQYAMQ 102
QV +H K+ Q
Sbjct: 1245 QVKAESEHKRKKLDAQ 1260
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 33.9 bits (76), Expect = 0.61
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 8/114 (7%)
Query: 15 NSTEESDDAFDTVTIPVPSEEPQESDQTEEHESGIEQFSESHAIHVEEQSDQSFSSLEPD 74
N ++ + T P EP E EE + E + I +EE+ ++ +L P
Sbjct: 1262 NKERKTGFKLNLYTPPETPMEPDEQVTVEEQKETSEGKTSPSPIRIEEEVKETGEALLPQ 1321
Query: 75 NEQLMEEVISPRQVSYTPQHHEKQYAMQRPNDDSLAFLDKIKSVKESLQESVED 128
E EE +P + +P ++P DD + ++ + +E +E E+
Sbjct: 1322 EENRREETCAPVSPNTSPG--------EKPEDDLIKPEEEEEEEEEEEEEEEEE 1367
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 33.9 bits (76), Expect = 0.61
Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 37 QESDQTEEHESGIEQFSESHAIHVEEQSDQSFSSLEPDNEQLMEEVISPRQVSYTPQHHE 96
++S + E S IE F + +EE ++ LE NE++M++V++
Sbjct: 3558 EKSLRIEAFVSEIESFFNT----IEENCSKNEKRLEEQNEEMMKKVLAQYDEKAQSFEEV 3613
Query: 97 KQYAMQRPNDDSLAFLDKIKSVKESLQESVEDSLATVKVVLIPVGQEI 144
K+ M+ ++ + FL + + K++L+ V ++ + V + +EI
Sbjct: 3614 KKKKMEFLHEQMVHFLQSMDTAKDTLETIVREAEELDEAVFLTSFEEI 3661
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 33.5 bits (75), Expect = 0.79
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 22/159 (13%)
Query: 4 QQEKYEAQNIVNSTEESDDAFDTVTIPVPSEEPQESDQTEEHES------GIEQFSES-- 55
Q K + N+ +S F I +P EEP+ + E IEQ +
Sbjct: 3970 QPLKEPSPNLQLQIVQSQKTFSKEGILMP-EEPETQAVLSDTEKIFPSAMSIEQINSLTV 4028
Query: 56 ---HAIHVEEQSDQSFSSLEPDNEQLM----EEVISPRQVSYTPQHHEKQYAMQRPNDDS 108
+ E + + SS+EP + EEV+SP++ + + + E++ +Q+ S
Sbjct: 4029 EPLKTLLAEPEGNYPQSSIEPPMHSYLTSVAEEVLSPKEKTVSDTNREQRVTLQKQEAQS 4088
Query: 109 LAFLDKIKSVKESLQESVEDSLATVKVVLIPVGQEIVIP 147
L +SL E +SL + V++ V E ++P
Sbjct: 4089 ALIL------SQSLAEGHVESLQSPDVMISQVNYEPLVP 4121
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 33.5 bits (75), Expect = 0.79
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 22/159 (13%)
Query: 4 QQEKYEAQNIVNSTEESDDAFDTVTIPVPSEEPQESDQTEEHES------GIEQFSES-- 55
Q K + N+ +S F I +P EEP+ + E IEQ +
Sbjct: 3903 QPLKEPSPNLQLQIVQSQKTFSKEGILMP-EEPETQAVLSDTEKIFPSAMSIEQINSLTV 3961
Query: 56 ---HAIHVEEQSDQSFSSLEPDNEQLM----EEVISPRQVSYTPQHHEKQYAMQRPNDDS 108
+ E + + SS+EP + EEV+SP++ + + + E++ +Q+ S
Sbjct: 3962 EPLKTLLAEPEGNYPQSSIEPPMHSYLTSVAEEVLSPKEKTVSDTNREQRVTLQKQEAQS 4021
Query: 109 LAFLDKIKSVKESLQESVEDSLATVKVVLIPVGQEIVIP 147
L +SL E +SL + V++ V E ++P
Sbjct: 4022 ALIL------SQSLAEGHVESLQSPDVMISQVNYEPLVP 4054
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 33.5 bits (75), Expect = 0.79
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 22/159 (13%)
Query: 4 QQEKYEAQNIVNSTEESDDAFDTVTIPVPSEEPQESDQTEEHES------GIEQFSES-- 55
Q K + N+ +S F I +P EEP+ + E IEQ +
Sbjct: 3778 QPLKEPSPNLQLQIVQSQKTFSKEGILMP-EEPETQAVLSDTEKIFPSAMSIEQINSLTV 3836
Query: 56 ---HAIHVEEQSDQSFSSLEPDNEQLM----EEVISPRQVSYTPQHHEKQYAMQRPNDDS 108
+ E + + SS+EP + EEV+SP++ + + + E++ +Q+ S
Sbjct: 3837 EPLKTLLAEPEGNYPQSSIEPPMHSYLTSVAEEVLSPKEKTVSDTNREQRVTLQKQEAQS 3896
Query: 109 LAFLDKIKSVKESLQESVEDSLATVKVVLIPVGQEIVIP 147
L +SL E +SL + V++ V E ++P
Sbjct: 3897 ALIL------SQSLAEGHVESLQSPDVMISQVNYEPLVP 3929
>gi|7662088 Rho guanine nucleotide exchange factor (GEF) 12 [Homo
sapiens]
Length = 1544
Score = 33.5 bits (75), Expect = 0.79
Identities = 37/141 (26%), Positives = 56/141 (39%), Gaps = 37/141 (26%)
Query: 6 EKYEAQNIVNSTEESDDAFDTVTIPVPSEEPQESDQTEEHESGIEQFSESHAIHVEEQSD 65
EK Q+++ S T IP+P P E D EE S ++ EEQ
Sbjct: 1119 EKTVWQDLICRMAASVKEQSTKPIPLPQSTPGEGDNDEEDPSKLK----------EEQHG 1168
Query: 66 QSFSSLE-PDNEQLMEEVISPRQVSYTPQHH----------------EKQYAMQRPNDDS 108
S + L+ PD + +E + +S PQ H E+Q+A ++ D +
Sbjct: 1169 ISVTGLQSPDRDLGLESTL----ISSKPQSHSLSTSGKSEVRDLFVAERQFAKEQHTDGT 1224
Query: 109 LAFLDKIKSVKESLQESVEDS 129
L K V E Q ++ DS
Sbjct: 1225 L------KEVGEDYQIAIPDS 1239
>gi|51093836 hypothetical protein LOC126859 isoform 1 [Homo sapiens]
Length = 1012
Score = 33.1 bits (74), Expect = 1.0
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 23/125 (18%)
Query: 422 NQSFTGAERKAALCELLEKETQIIASIGRHRYIAYMANQEAAIQAFLDKCSAPKIWRTPN 481
NQ +TG + L +L+KE I M E Q +D ++
Sbjct: 239 NQEYTGPTKMHKLLHILKKEQTIYN----------MIFHELIRQVSVDCADRGELLSKVR 288
Query: 482 GKTIEMDTQFTIRARELQNIYKCIMLKNISQDERLDVLLTLKHTVKE----------HEC 531
+ ++M Q AR++ + YK ++ + + L+ L KH ++E H+
Sbjct: 289 ERYVQMLDQI---ARQMIDFYKDLVTQRVMDQRILEELYNFKHVIEELTRELCLVRAHDV 345
Query: 532 KLTQE 536
KLT+E
Sbjct: 346 KLTKE 350
>gi|51093834 hypothetical protein LOC126859 isoform 2 [Homo sapiens]
Length = 938
Score = 33.1 bits (74), Expect = 1.0
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 23/125 (18%)
Query: 422 NQSFTGAERKAALCELLEKETQIIASIGRHRYIAYMANQEAAIQAFLDKCSAPKIWRTPN 481
NQ +TG + L +L+KE I M E Q +D ++
Sbjct: 239 NQEYTGPTKMHKLLHILKKEQTIYN----------MIFHELIRQVSVDCADRGELLSKVR 288
Query: 482 GKTIEMDTQFTIRARELQNIYKCIMLKNISQDERLDVLLTLKHTVKE----------HEC 531
+ ++M Q AR++ + YK ++ + + L+ L KH ++E H+
Sbjct: 289 ERYVQMLDQI---ARQMIDFYKDLVTQRVMDQRILEELYNFKHVIEELTRELCLVRAHDV 345
Query: 532 KLTQE 536
KLT+E
Sbjct: 346 KLTKE 350
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,754,313
Number of Sequences: 37866
Number of extensions: 1255664
Number of successful extensions: 5027
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 4824
Number of HSP's gapped (non-prelim): 227
length of query: 791
length of database: 18,247,518
effective HSP length: 110
effective length of query: 681
effective length of database: 14,082,258
effective search space: 9590017698
effective search space used: 9590017698
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.