Guide to the Human Genome
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Name: IQUB Sequence: fasta or formatted (791aa) NCBI GI: 223972685
Description:

IQ motif and ubiquitin domain containing

Referenced in:

Additional Interaction Domain Families
Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         36           3
 C cysteine            1.5         12           1
 D aspartate           4.9         39           2
 E glutamate           9.0         71           2
 F phenylalanine       3.9         31           2
 G glycine             2.5         20           2
 H histidine           3.7         29           2
 I isoleucine          7.5         59           2
 K lysine              7.3         58           2
 L leucine             9.0         71           2
 M methionine          1.5         12           2
 N asparagine          4.0         32           2
 P proline             3.9         31           2
 Q glutamine           7.2         57           2
 R arginine            5.1         40           2
 S serine              6.8         54           2
 T threonine           6.2         49           2
 V valine              6.1         48           2
 W tryptophan          1.3         10           1
 Y tyrosine            4.0         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   IQ motif and ubiquitin domain containing 
CDC2L2                0.010   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.010   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
SUMO1                 0.008   SMT3 suppressor of mif two 3 homolog 1 isoform a pre...
SUMO1                 0.008   SMT3 suppressor of mif two 3 homolog 1 isoform a prec...
PRPF40B               0.006   Huntingtin interacting protein C isoform 2 
PRPF40B               0.006   Huntingtin interacting protein C isoform 1 
SUMO1                 0.006   SMT3 suppressor of mif two 3 homolog 1 isoform b pre...
MACROD2               0.006   MACRO domain containing 2 isoform 1 
MACROD2               0.006   MACRO domain containing 2 isoform 2 
MANEAL                0.006   mannosidase, endo-alpha-like isoform 3 
MANEAL                0.006   mannosidase, endo-alpha-like isoform 2 
LOC727832             0.006   golgi autoantigen, golgin subfamily a-like 
LOC440243             0.006   PREDICTED: Putative golgin subfamily A member 6-lik...
TRIM44                0.006   DIPB protein 
MYH10                 0.006   myosin, heavy polypeptide 10, non-muscle 
MYST4                 0.006   MYST histone acetyltransferase (monocytic leukemia)...
CMYA5                 0.006   cardiomyopathy associated 5 
TTN                   0.005   titin isoform novex-2 
TTN                   0.005   titin isoform novex-1 
TTN                   0.005   titin isoform N2-B 
ARHGEF12              0.005   Rho guanine nucleotide exchange factor (GEF) 12 [Homo...
C1orf125              0.005   hypothetical protein LOC126859 isoform 1 
C1orf125              0.005   hypothetical protein LOC126859 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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