Guide to the Human Genome
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Name: ZNF566 Sequence: fasta or formatted (419aa) NCBI GI: 223890210
Description:

zinc finger protein 566 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [418aa] zinc finger protein 566 isoform 1
alt prot [418aa] zinc finger protein 566 isoform 1
alt prot [418aa] zinc finger protein 566 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.4         10           1
 C cysteine            5.0         21           1
 D aspartate           3.3         14           2
 E glutamate          10.3         43           2
 F phenylalanine       5.3         22           1
 G glycine             5.7         24           2
 H histidine           6.4         27           2
 I isoleucine          5.3         22           2
 K lysine              9.3         39           3
 L leucine             5.5         23           1
 M methionine          1.2          5           1
 N asparagine          3.1         13           1
 P proline             3.6         15           1
 Q glutamine           6.2         26           2
 R arginine            5.7         24           2
 S serine              9.1         38           2
 T threonine           5.5         23           1
 V valine              1.9          8           1
 W tryptophan          1.4          6           1
 Y tyrosine            3.8         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 566 isoform 2 
ZNF566                0.992   zinc finger protein 566 isoform 1 
ZNF566                0.992   zinc finger protein 566 isoform 1 
ZNF566                0.992   zinc finger protein 566 isoform 1 
ZNF383                0.596   zinc finger protein 383 
ZNF582                0.574   zinc finger protein 582 
ZNF565                0.532   zinc finger protein 565 
ZNF565                0.532   zinc finger protein 565 
ZFP14                 0.523   zinc finger protein 14-like 
ZNF790                0.515   zinc finger protein 790 
ZFP82                 0.514   zinc finger protein 82 homolog 
ZFP30                 0.504   zinc finger protein 30 homolog 
ZNF461                0.494   gonadotropin inducible transcription repressor 1 [Ho...
ZNF829                0.489   zinc finger protein 829 
ZNF780A               0.487   zinc finger protein 780A isoform a 
ZNF283                0.487   zinc finger protein 283 
ZNF570                0.486   zinc finger protein 570 
ZNF420                0.483   zinc finger protein 420 
ZNF780B               0.481   zinc finger protein 780B 
ZNF780A               0.480   zinc finger protein 780A isoform b 
ZNF780A               0.480   zinc finger protein 780A isoform b 
ZNF571                0.471   zinc finger protein 571 
ZNF540                0.462   zinc finger protein 540 
ZNF546                0.461   zinc finger protein 546 
ZNF583                0.458   zinc finger protein 583 
ZNF583                0.458   zinc finger protein 583 
ZNF583                0.458   zinc finger protein 583 
ZNF345                0.447   zinc finger protein 345 
ZNF140                0.447   zinc finger protein 140 
ZNF184                0.438   zinc finger protein 184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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