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Search of human proteins with 223633995
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223633995 Hsp70 subfamily B suppressor 1-like protein
isoform 3 [Homo sapiens]
(632 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223633995 Hsp70 subfamily B suppressor 1-like protein isoform... 1242 0.0
gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 291 2e-78
gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 187 3e-47
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 43 8e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 40 0.009
gi|150378539 piccolo isoform 1 [Homo sapiens] 40 0.009
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 40 0.009
gi|163937854 ataxin 7-like 1 isoform 1 [Homo sapiens] 39 0.015
gi|211971080 ataxin 7-like 1 isoform 3 [Homo sapiens] 39 0.015
gi|153251840 zinc finger protein 839 [Homo sapiens] 35 0.16
gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo sap... 33 0.80
gi|60115723 ankyrin repeat domain 20 family, member A2 [Homo sap... 33 0.80
gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo sa... 33 0.80
gi|149363679 ankyrin repeat domain 20 family, member A4 [Homo sa... 33 0.80
gi|30795196 LIM homeobox protein 2 [Homo sapiens] 33 1.0
gi|24430212 interleukin 23 receptor precursor [Homo sapiens] 32 1.4
gi|46359075 zinc finger protein 423 [Homo sapiens] 32 1.4
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 32 1.4
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 32 1.4
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 32 1.8
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 32 1.8
gi|38327034 ubiquitination factor E4B isoform 2 [Homo sapiens] 32 1.8
gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens] 32 1.8
gi|237681119 breast cancer 1, early onset isoform 2 [Homo sapiens] 32 2.3
gi|20302168 toll-like receptor 8 [Homo sapiens] 32 2.3
gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens] 32 2.3
gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens] 32 2.3
gi|110611228 utrophin [Homo sapiens] 32 2.3
gi|12056971 anaphase promoting complex subunit 1 [Homo sapiens] 32 2.3
gi|31559815 keratin 26 [Homo sapiens] 32 2.3
>gi|223633995 Hsp70 subfamily B suppressor 1-like protein isoform 3
[Homo sapiens]
Length = 632
Score = 1242 bits (3213), Expect = 0.0
Identities = 632/632 (100%), Positives = 632/632 (100%)
Query: 1 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED 60
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED
Sbjct: 1 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED 60
Query: 61 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL 120
LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL
Sbjct: 61 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL 120
Query: 121 EQDRVQSLKDKNEATVSTGKIAKGVLFSSSEVSADNVQSSYPQSANHLDYSSKPFDFASS 180
EQDRVQSLKDKNEATVSTGKIAKGVLFSSSEVSADNVQSSYPQSANHLDYSSKPFDFASS
Sbjct: 121 EQDRVQSLKDKNEATVSTGKIAKGVLFSSSEVSADNVQSSYPQSANHLDYSSKPFDFASS 180
Query: 181 VGKYGLSHNSSVPTHCLLHRKKKLDTRKSEKKLESCKLTKELSLANLIHDMSRDSCESQP 240
VGKYGLSHNSSVPTHCLLHRKKKLDTRKSEKKLESCKLTKELSLANLIHDMSRDSCESQP
Sbjct: 181 VGKYGLSHNSSVPTHCLLHRKKKLDTRKSEKKLESCKLTKELSLANLIHDMSRDSCESQP 240
Query: 241 SVRLSSTDSLESLLSKNLDADLLRPHASECISKDDSAFKEIPDLKTIIIKGTTPNNSLYI 300
SVRLSSTDSLESLLSKNLDADLLRPHASECISKDDSAFKEIPDLKTIIIKGTTPNNSLYI
Sbjct: 241 SVRLSSTDSLESLLSKNLDADLLRPHASECISKDDSAFKEIPDLKTIIIKGTTPNNSLYI 300
Query: 301 QNNSLSDFQNIPVQDSLGSSNNPLYLTSSLENMTVDNLNASKETEVGNVSLVEQSAKNHT 360
QNNSLSDFQNIPVQDSLGSSNNPLYLTSSLENMTVDNLNASKETEVGNVSLVEQSAKNHT
Sbjct: 301 QNNSLSDFQNIPVQDSLGSSNNPLYLTSSLENMTVDNLNASKETEVGNVSLVEQSAKNHT 360
Query: 361 FKNDNLQFSQCESPSLTELFQEHKENNISQCFTLSDLCNQSSASFTDLSLGSFPLSQLAN 420
FKNDNLQFSQCESPSLTELFQEHKENNISQCFTLSDLCNQSSASFTDLSLGSFPLSQLAN
Sbjct: 361 FKNDNLQFSQCESPSLTELFQEHKENNISQCFTLSDLCNQSSASFTDLSLGSFPLSQLAN 420
Query: 421 RCQSSPGISELTGSLSSLAFHKASPTRDLENLSLSELIAETIDVDNSQIKKESFEVSLSE 480
RCQSSPGISELTGSLSSLAFHKASPTRDLENLSLSELIAETIDVDNSQIKKESFEVSLSE
Sbjct: 421 RCQSSPGISELTGSLSSLAFHKASPTRDLENLSLSELIAETIDVDNSQIKKESFEVSLSE 480
Query: 481 VRSPGIDSNIDLSVLIKNPDFVPKPVVDPSIAPSSRTKVLSSKLGKNSNFAKDNKKNNKG 540
VRSPGIDSNIDLSVLIKNPDFVPKPVVDPSIAPSSRTKVLSSKLGKNSNFAKDNKKNNKG
Sbjct: 481 VRSPGIDSNIDLSVLIKNPDFVPKPVVDPSIAPSSRTKVLSSKLGKNSNFAKDNKKNNKG 540
Query: 541 SLTRKPPFSLSWTKALAARPSAFASTLCLRYPLKSCKRRTLDLYKTFLYSRQVQDVKDKE 600
SLTRKPPFSLSWTKALAARPSAFASTLCLRYPLKSCKRRTLDLYKTFLYSRQVQDVKDKE
Sbjct: 541 SLTRKPPFSLSWTKALAARPSAFASTLCLRYPLKSCKRRTLDLYKTFLYSRQVQDVKDKE 600
Query: 601 ISPLVAITPFDFKSASPDDIVKANQKKAFTRE 632
ISPLVAITPFDFKSASPDDIVKANQKKAFTRE
Sbjct: 601 ISPLVAITPFDFKSASPDDIVKANQKKAFTRE 632
>gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1
[Homo sapiens]
Length = 684
Score = 291 bits (744), Expect = 2e-78
Identities = 144/144 (100%), Positives = 144/144 (100%)
Query: 1 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED 60
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED
Sbjct: 1 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED 60
Query: 61 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL 120
LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL
Sbjct: 61 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL 120
Query: 121 EQDRVQSLKDKNEATVSTGKIAKG 144
EQDRVQSLKDKNEATVSTGKIAKG
Sbjct: 121 EQDRVQSLKDKNEATVSTGKIAKG 144
>gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2
[Homo sapiens]
Length = 642
Score = 187 bits (474), Expect = 3e-47
Identities = 102/144 (70%), Positives = 102/144 (70%), Gaps = 42/144 (29%)
Query: 1 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED 60
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPST
Sbjct: 1 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPST------------------------ 36
Query: 61 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL 120
ARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL
Sbjct: 37 ------------------ARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL 78
Query: 121 EQDRVQSLKDKNEATVSTGKIAKG 144
EQDRVQSLKDKNEATVSTGKIAKG
Sbjct: 79 EQDRVQSLKDKNEATVSTGKIAKG 102
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 43.1 bits (100), Expect = 8e-04
Identities = 84/372 (22%), Positives = 141/372 (37%), Gaps = 24/372 (6%)
Query: 121 EQDRVQSLKDKNEATVSTGKIAKGVLFSSSEVSADNVQSSYPQSANHLDYSSKPFDFA-S 179
+ D+ S K K++++ S + S+S S+D+ S S + D S D + S
Sbjct: 536 DNDKSDSGKGKSDSSDSDSSDS-----SNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDS 590
Query: 180 SVGKYGLSHNSSVPTHCLLHRKKKLDTRKSEKKLESCKLTKELSLANLIHDMSRDSCESQ 239
S S NSS + + S+ K +S K + S + D DS +S
Sbjct: 591 SDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDS----DSKSDSSDSN 646
Query: 240 PSVRLSSTDSLESLLSKNLDADLLRPHASECISKDDSAFKEIPDLKTIIIKGTTPNNSLY 299
S ++DS +S S N + S D S D + ++S
Sbjct: 647 SSDSSDNSDSSDSSNSSN--------SSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNS 698
Query: 300 IQNNSLSDFQNIPVQDSLGSSN-NPLYLTSSLENMTVDNLNASKETEVGNVSLVEQSAKN 358
+++ SD + DS SSN N SS + + D+ N+S ++ + S S+ +
Sbjct: 699 SESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDS 758
Query: 359 HTFKNDNLQFSQCESPSLTELFQEHKENNISQCFTLSDLCNQS-SASFTDLSLGSFPLSQ 417
N + +S ++ N+ S SD N S S++ +D S S
Sbjct: 759 SDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDS 818
Query: 418 LANRCQSSPGISELTGSLSSLAFHKASPTRDLENLSLSELIAETIDVDNSQIKKESFEVS 477
++ S S+ + S +S +S + D + S D NS +S + S
Sbjct: 819 DSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSS----NRSDSSNSSDSSDSSDSS 874
Query: 478 LSEVRSPGIDSN 489
S S DSN
Sbjct: 875 NSSDSSDSSDSN 886
Score = 40.8 bits (94), Expect = 0.004
Identities = 72/342 (21%), Positives = 129/342 (37%), Gaps = 15/342 (4%)
Query: 148 SSSEVSADNVQSSYPQSANHLDYSSKPFDFASSVGKYGLSHNSSVPTHCLLHRKKKLDTR 207
S+S S+D+ SS S+N D SS D + S S +S + D+
Sbjct: 804 SNSSDSSDSSDSSDSDSSNSSD-SSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSS 862
Query: 208 KSEKKLESCKLTKELSLANLIHDMSRDSCESQPSVRLSSTDSLESLLSKNLDADLLRPHA 267
S +S + D S S ++ S S+DS S S + D+ +
Sbjct: 863 NSSDSSDSSDSSNS-------SDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSS 915
Query: 268 SECISKDDSAFKEIPDLKTIIIKGTTPNNSLYIQNNSLSDFQNIPVQDSLGSSNNPLYLT 327
S D S D + ++S ++ SD N + S+N +
Sbjct: 916 DSSNSSDSSESSNSSD------NSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSS 969
Query: 328 SSLENMTVDNLNASKETEVGNVSLVEQSAKNHTFKNDNLQFSQCESPSLTELFQEHKENN 387
S + + D+ N+S ++ + S S+ + + + +S + ++ +N
Sbjct: 970 DSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSN 1029
Query: 388 ISQCFTLSDLCNQSSASFTDLSLGSFPLSQLANRCQSSPGISELTGSLSSLAFHKASPTR 447
S SD + S +S + S S S ++ SS S+ + S S ++S +
Sbjct: 1030 SSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDS-SDSSDSSDSSDSSESSDSS 1088
Query: 448 DLENLSLSELIAETIDVDNSQIKKESFEVSLSEVRSPGIDSN 489
D N S S +++ D +S +S + S S S DS+
Sbjct: 1089 DSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSS 1130
Score = 40.4 bits (93), Expect = 0.005
Identities = 95/494 (19%), Positives = 175/494 (35%), Gaps = 17/494 (3%)
Query: 13 DEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYEDLKESSNSVSNHQ 72
D D D + S D S S+ + S S + + D D +SS+S S+
Sbjct: 568 DSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSS 627
Query: 73 LSGFDQARLYSCLDHMREVLGDAVPDEILIEAV----LKNKFDVQKALSGVLEQDRVQSL 128
S D + S D D+ + ++ + D + D S
Sbjct: 628 KSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSS 687
Query: 129 KDKNEATVSTGKIAKGVLFSSSEVSAD-----NVQSSYPQSANHLDYSSKPFDFASSVGK 183
+ + S + SS S+D N SS S+N D S SS
Sbjct: 688 DSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSS 747
Query: 184 YGLSHNSSVPTHCLLHRKKKLDTRKSEKKLESCKLTKELSLANLIHDM-------SRDSC 236
+ + S + + D+ S +S + +N S +S
Sbjct: 748 DSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSS 807
Query: 237 ESQPSVRLSSTDSLESLLSKNLDADLLRPHASECISKDDSAFKEIPDLKTIIIKGTTPNN 296
+S S S +DS S S N ++S+ DS+ D + ++
Sbjct: 808 DSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDS 867
Query: 297 SLYIQNNSLSDFQNIPVQDSLGSSNNPLYLTSSLENMTVDNLNASKETEVGNVSLVEQSA 356
S +++ SD + + +S++ ++S ++ + D+ N+S ++ N S +S+
Sbjct: 868 SDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESS 927
Query: 357 KNHTFKNDNLQFSQCESPSLTELFQEHKENNISQCFTLSDLCNQSSASFTDLSLGSFPL- 415
+ N + + +S ++ +N S SD + +S+ +D S S
Sbjct: 928 NSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSD 987
Query: 416 SQLANRCQSSPGISELTGSLSSLAFHKASPTRDLENLSLSELIAETIDVDNSQIKKESFE 475
S ++ S S + S S +S + D N S S +++ D +S +S +
Sbjct: 988 SSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSD 1047
Query: 476 VSLSEVRSPGIDSN 489
S S S DS+
Sbjct: 1048 SSDSSDSSNSSDSS 1061
Score = 40.4 bits (93), Expect = 0.005
Identities = 85/394 (21%), Positives = 152/394 (38%), Gaps = 25/394 (6%)
Query: 148 SSSEVSADNVQSSYPQSANHLDYSSKPFDFASSVGKYGLSHNSSVPTHCLLHRKKKLDTR 207
S S S+DN SS S+N D SS D ++S S +S+ + D+
Sbjct: 924 SESSNSSDNSNSS--DSSNSSD-SSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSS 980
Query: 208 KSEKKLESCKLTKELSLANLIHDMSRDSCESQPSVRLSSTDSLESLLSKNLDADLLRPHA 267
S +S + D S S S S S+DS +S S + D+ +
Sbjct: 981 NSSDSSDSSDSS----------DSSDSSDSSNSSDSSDSSDSSDS--SNSSDSSNSSDSS 1028
Query: 268 SECISKDDSAFKEIPDLKTIIIKGTTPNNSLYIQNNSLSDFQNIPVQDSLGSSNNPLYLT 327
+ S D S + D ++ ++ +NS + DS SS++
Sbjct: 1029 NSSDSSDSSDSSDSSD--------SSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSD 1080
Query: 328 SSLENMTVDNLNASKETEVGNVSLVEQSAKNHTFKNDNLQFSQCESPSLTELFQEHKENN 387
SS + + D+ N+S ++ + S S+ + + + + +S ++ +N
Sbjct: 1081 SSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSN 1140
Query: 388 ISQCFTLSDLCNQSSASFTDLSLGSFPLSQLANRCQSSPGISELTGSLSSLAFHKASPTR 447
S S+ + S +S + S S S ++ SS S+ + S S +S +
Sbjct: 1141 SSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSS-NSSDSSDSSDSSDSSDSSDSS 1199
Query: 448 DLENLSLSELIAETIDVDNSQIKKESFEVSLSEVRSPGIDSNIDLSVLIKNPDFVPKPVV 507
D + S S +++ D +S +S + S S S DS+ D S + D
Sbjct: 1200 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSS-DSSDSSNSSDSSDSSDS 1258
Query: 508 DPSIAPSSRTKVLSSKLGKNSNFAKDNKKNNKGS 541
S + S+ SK G +N D+ +++GS
Sbjct: 1259 SDSTSDSNDESDSQSKSGNGNNNGSDSDSDSEGS 1292
Score = 38.9 bits (89), Expect = 0.015
Identities = 80/345 (23%), Positives = 128/345 (37%), Gaps = 26/345 (7%)
Query: 148 SSSEVSADNVQSSYPQSANHLDYSSKPFDFASSVGKYGLSHNSSVPTHCLLHRKKKLDTR 207
S S S+D+ S S+N D S+ SS S NSS D+
Sbjct: 839 SDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSD-----SSNSS-------------DSS 880
Query: 208 KSEKKLESCKLTKELSLANLIHDMSRDSCESQPSVRLS-STDSLESLLSKNLDADLLRPH 266
S ES + +N S DS S S S S+DS ES S + D
Sbjct: 881 DSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSES--SNSSDNSNSSDS 938
Query: 267 ASECISKDDSAFKEIPDLKTIIIKGTTPNNSLYIQNNSLSDFQNIPVQDSLGSSNNPLYL 326
++ S D S D + N+S +NS + DS SS++
Sbjct: 939 SNSSDSSDSSDSSNSSDSSN---SSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSS 995
Query: 327 TSSLENMTVDNLNASKETEVGNVSLVEQSAKNHTFKNDNLQFSQCESPSLTELFQEHKEN 386
SS + + D+ ++S ++ N S S+ + + + +S ++ +
Sbjct: 996 DSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSS 1055
Query: 387 NISQCFTLSDLCNQSSASFTDLSLGSFPLSQLANRCQSSPG--ISELTGSLSSLAFHKAS 444
N S SD + S +S + S S S ++ SS S+ + S S +S
Sbjct: 1056 NSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSS 1115
Query: 445 PTRDLENLSLSELIAETIDVDNSQIKKESFEVSLSEVRSPGIDSN 489
+ D N S S +++ D +S +S + S S S DS+
Sbjct: 1116 DSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSS 1160
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 39.7 bits (91), Expect = 0.009
Identities = 83/350 (23%), Positives = 133/350 (38%), Gaps = 65/350 (18%)
Query: 48 PSVEPVEEYDY-EDLKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVL 106
PS+ P +E D + LK+ S S + S D A+L S + + E + DE +
Sbjct: 1378 PSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLESTVLSILEAQASTLADEKSEKKTQ 1437
Query: 107 KNKFDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGVLFSSSEVSADNVQSSYPQSAN 166
++ ++ +Q++ QSL + E T+S +I + D+ Q P S +
Sbjct: 1438 PHEVSPEQPK----DQEKTQSLSETLEITISEEEIKESQEERKDTFKKDS-QQDIPSSKD 1492
Query: 167 HLDYSS---------KPFDFASSVGKYGLSHNSSVPTHCLLHRKKKLDTRKS---EKKLE 214
H + S +P+D SV + S NS VP RK++ S E K E
Sbjct: 1493 HKEKSEFVDDITTRREPYD---SVEESSESENSPVP-----QRKRRTSVGSSSSDEYKQE 1544
Query: 215 SCKLTKELS--LANLIHDMSRDS----CESQPSVR------LSSTDS------------- 249
+ + E + I +MS D E +R SST+S
Sbjct: 1545 DSQGSGEEEDFIRKQIIEMSADEDASGSEDDEFIRNQLKEISSSTESQKKEETKGKGKIT 1604
Query: 250 ------LESLLSKNLDADLLRPHASECISKDDSAFKEIPDLKTIIIKGTTPNNSLYIQNN 303
L S ++D D R H+ +DD AF E P+LK K +
Sbjct: 1605 AGKHRRLTRKSSTSIDEDAGRRHSWH--DEDDEAFDESPELKYRETKSQESEELVVTGGG 1662
Query: 304 SLSDFQNIPVQDSLGSSNNPLYLTSSLENMTVDNLNASKETEVGNVSLVE 353
L F+ I + ++ Y S + T +L +E E+ SL +
Sbjct: 1663 GLRRFKTIELNSTIADK----YSAESSQKKT--SLYFDEEPELEMESLTD 1706
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 39.7 bits (91), Expect = 0.009
Identities = 83/350 (23%), Positives = 133/350 (38%), Gaps = 65/350 (18%)
Query: 48 PSVEPVEEYDY-EDLKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVL 106
PS+ P +E D + LK+ S S + S D A+L S + + E + DE +
Sbjct: 1378 PSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLESTVLSILEAQASTLADEKSEKKTQ 1437
Query: 107 KNKFDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGVLFSSSEVSADNVQSSYPQSAN 166
++ ++ +Q++ QSL + E T+S +I + D+ Q P S +
Sbjct: 1438 PHEVSPEQPK----DQEKTQSLSETLEITISEEEIKESQEERKDTFKKDS-QQDIPSSKD 1492
Query: 167 HLDYSS---------KPFDFASSVGKYGLSHNSSVPTHCLLHRKKKLDTRKS---EKKLE 214
H + S +P+D SV + S NS VP RK++ S E K E
Sbjct: 1493 HKEKSEFVDDITTRREPYD---SVEESSESENSPVP-----QRKRRTSVGSSSSDEYKQE 1544
Query: 215 SCKLTKELS--LANLIHDMSRDS----CESQPSVR------LSSTDS------------- 249
+ + E + I +MS D E +R SST+S
Sbjct: 1545 DSQGSGEEEDFIRKQIIEMSADEDASGSEDDEFIRNQLKEISSSTESQKKEETKGKGKIT 1604
Query: 250 ------LESLLSKNLDADLLRPHASECISKDDSAFKEIPDLKTIIIKGTTPNNSLYIQNN 303
L S ++D D R H+ +DD AF E P+LK K +
Sbjct: 1605 AGKHRRLTRKSSTSIDEDAGRRHSWH--DEDDEAFDESPELKYRETKSQESEELVVTGGG 1662
Query: 304 SLSDFQNIPVQDSLGSSNNPLYLTSSLENMTVDNLNASKETEVGNVSLVE 353
L F+ I + ++ Y S + T +L +E E+ SL +
Sbjct: 1663 GLRRFKTIELNSTIADK----YSAESSQKKT--SLYFDEEPELEMESLTD 1706
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 39.7 bits (91), Expect = 0.009
Identities = 68/343 (19%), Positives = 143/343 (41%), Gaps = 24/343 (6%)
Query: 57 DYEDLKESSNSVSNHQLSGFDQARLYSCLD-HMREVLGDAVPDEILIEAVLKNKFDVQKA 115
+ E LKE + +G ++ R+ + + + L ++ + +E+ L+NK ++ +
Sbjct: 415 ELEILKEKLRQLKEENNNGKEKLRIMAVKNSEVMAQLTESRQSILKLESELENKDEILR- 473
Query: 116 LSGVLEQDRVQSLKDKNEATVSTGKIAKGVLFSSSEVSADNVQ-SSYPQSANHLDYSSKP 174
D+ + + E V + + E+ + V+ S + + L +
Sbjct: 474 -------DKFSLMNENRELKVRVAAQNERLDLCQQEIESSRVELRSLEKIISQLPLKREL 526
Query: 175 FDFASSVGKYGLSHNSSVPTHCL--LHRKK----KLDTRKSEKKLESCKLTKELSLANLI 228
F F S + KY +S S+ C+ K +L + + K+ E KL L+ AN +
Sbjct: 527 FGFKSYLSKYQMSSFSNKEDRCIGCCEANKLVISELRIKLAIKEAEIQKLHANLT-ANQL 585
Query: 229 HDMSRDSCESQPSVRLSSTDSLESLLSKNLDADLLRPHASECISKDDSAFKE-----IPD 283
+SQ S +LSS ++ L + A+ ++ ++K ++ I +
Sbjct: 586 SQSLITCNDSQESSKLSSLETEPVKLGGHQVAESVKDQNQHTMNKQYEKERQRLVTGIEE 645
Query: 284 LKTIIIKGTTPNNSLYI-QNNSLSDFQNIPVQDSLGSSNNPLYLTSSLENMTVDNLNASK 342
L+T +I+ N+ L + + S FQ I ++ L ++N L S + L K
Sbjct: 646 LRTKLIQIEAENSDLKVNMAHRTSQFQLIQ-EELLEKASNSSKLESEMTKKCSQLLTLEK 704
Query: 343 ETEVGNVSLVEQSAKNHTFKNDNLQFSQCESPSLTELFQEHKE 385
+ E V+ +AKN + + ++ ++ T + EH++
Sbjct: 705 QLEEKIVAYSSIAAKNAELEQELMEKNEKIRSLETNINTEHEK 747
>gi|163937854 ataxin 7-like 1 isoform 1 [Homo sapiens]
Length = 861
Score = 38.9 bits (89), Expect = 0.015
Identities = 57/251 (22%), Positives = 94/251 (37%), Gaps = 39/251 (15%)
Query: 199 HRKKKLDTRKSEKKLESCKLTKELSLANLIHDMSRDSCESQP-SVRLSSTDSLESLLSKN 257
H+ K T KS K K+LS + D S + + +P S SS+ S S L +
Sbjct: 616 HKPSKTKTSKSSK-------VKDLSTRS---DESPSNKKRKPQSSTSSSSSSSSSSLQTS 665
Query: 258 LDADLLRPHASECISKDDSAFKEIPDLKTIIIKGTTPNNSLYIQN--NSLSDFQN----- 310
L + L PH C+ SA + P NSL + N N +S
Sbjct: 666 LSSPLSGPHKKNCVLNASSALNSY--------QAAPPYNSLSVHNSNNGVSPLSAKLEPS 717
Query: 311 ------------IPVQDSLGSSNNPLYLTSSLENMTVDNLNASKETEVGNVSLVEQSAKN 358
+ ++G S++ L+ + +L+ + V ++ L ++
Sbjct: 718 GRTSLPGGPADIVRQVGAVGGSSDSCPLSVPSLALHAGDLSLASHNAVSSLPLSFDKSEG 777
Query: 359 HTFKNDNLQFSQCESPSLTELFQEHKENNISQCFTLSDLCNQSSASFTDLSLGSFPLSQL 418
KN + C+ + + HK+N S + D N +S+ + S LSQ
Sbjct: 778 KKRKNSSSSSKACKITKMPGMNSVHKKNPPSLLAPVPDPVNSTSSRQVGKN-SSLALSQS 836
Query: 419 ANRCQSSPGIS 429
+ SSPG S
Sbjct: 837 SPSSISSPGHS 847
Score = 33.9 bits (76), Expect = 0.47
Identities = 65/275 (23%), Positives = 103/275 (37%), Gaps = 35/275 (12%)
Query: 265 PHASECISKDDSAFKEIPDLKTI--IIKGTT--PNNSLYIQNNSLSDFQNIPVQDSLGSS 320
PH + +S DS FK + I +I + P+ + +++ + D +
Sbjct: 585 PHVAATLSIMDSTFKAPSAVSPIPAVIPSPSHKPSKTKTSKSSKVKDLSTRSDESPSNKK 644
Query: 321 NNPLYLTSSLENMTVDNLNASKETEVGNVSLVEQSAKNHTFKNDNLQFSQCESPSLTELF 380
P TSS + + +L S + + KN + S +P L
Sbjct: 645 RKPQSSTSSSSSSSSSSLQTSLSSPLSG-----PHKKNCVLNASSALNSYQAAPPYNSLS 699
Query: 381 QEHKENNISQCFTLSDLCNQSSASFTDLSLGSFPLSQLANRCQSSPGISELTGSLSSLAF 440
+ N +S LS S T L G + + S L S+ SLA
Sbjct: 700 VHNSNNGVSP---LSAKLEPSGR--TSLPGGPADIVRQVGAVGGSSDSCPL--SVPSLAL 752
Query: 441 HKASPTRDLENLSLSELIAETIDVDNSQIKKESFEVSLSEV----RSPGIDSNIDLSVLI 496
H DL S + + + + D S+ KK S S+ + PG++S V
Sbjct: 753 HAG----DLSLASHNAVSSLPLSFDKSEGKKRKNSSSSSKACKITKMPGMNS-----VHK 803
Query: 497 KNPDFVPKPVVDPSIAPSSRTKVLSSKLGKNSNFA 531
KNP + PV DP + SSR ++GKNS+ A
Sbjct: 804 KNPPSLLAPVPDPVNSTSSR------QVGKNSSLA 832
>gi|211971080 ataxin 7-like 1 isoform 3 [Homo sapiens]
Length = 738
Score = 38.9 bits (89), Expect = 0.015
Identities = 57/251 (22%), Positives = 94/251 (37%), Gaps = 39/251 (15%)
Query: 199 HRKKKLDTRKSEKKLESCKLTKELSLANLIHDMSRDSCESQP-SVRLSSTDSLESLLSKN 257
H+ K T KS K K+LS + D S + + +P S SS+ S S L +
Sbjct: 492 HKPSKTKTSKSSK-------VKDLSTRS---DESPSNKKRKPQSSTSSSSSSSSSSLQTS 541
Query: 258 LDADLLRPHASECISKDDSAFKEIPDLKTIIIKGTTPNNSLYIQN--NSLSDFQN----- 310
L + L PH C+ SA + P NSL + N N +S
Sbjct: 542 LSSPLSGPHKKNCVLNASSALNSY--------QAAPPYNSLSVHNSNNGVSPLSAKLEPS 593
Query: 311 ------------IPVQDSLGSSNNPLYLTSSLENMTVDNLNASKETEVGNVSLVEQSAKN 358
+ ++G S++ L+ + +L+ + V ++ L ++
Sbjct: 594 GRTSLPGGPADIVRQVGAVGGSSDSCPLSVPSLALHAGDLSLASHNAVSSLPLSFDKSEG 653
Query: 359 HTFKNDNLQFSQCESPSLTELFQEHKENNISQCFTLSDLCNQSSASFTDLSLGSFPLSQL 418
KN + C+ + + HK+N S + D N +S+ + S LSQ
Sbjct: 654 KKRKNSSSSSKACKITKMPGMNSVHKKNPPSLLAPVPDPVNSTSSRQVGKN-SSLALSQS 712
Query: 419 ANRCQSSPGIS 429
+ SSPG S
Sbjct: 713 SPSSISSPGHS 723
Score = 33.9 bits (76), Expect = 0.47
Identities = 65/275 (23%), Positives = 103/275 (37%), Gaps = 35/275 (12%)
Query: 265 PHASECISKDDSAFKEIPDLKTI--IIKGTT--PNNSLYIQNNSLSDFQNIPVQDSLGSS 320
PH + +S DS FK + I +I + P+ + +++ + D +
Sbjct: 461 PHVAATLSIMDSTFKAPSAVSPIPAVIPSPSHKPSKTKTSKSSKVKDLSTRSDESPSNKK 520
Query: 321 NNPLYLTSSLENMTVDNLNASKETEVGNVSLVEQSAKNHTFKNDNLQFSQCESPSLTELF 380
P TSS + + +L S + + KN + S +P L
Sbjct: 521 RKPQSSTSSSSSSSSSSLQTSLSSPLSG-----PHKKNCVLNASSALNSYQAAPPYNSLS 575
Query: 381 QEHKENNISQCFTLSDLCNQSSASFTDLSLGSFPLSQLANRCQSSPGISELTGSLSSLAF 440
+ N +S LS S T L G + + S L S+ SLA
Sbjct: 576 VHNSNNGVSP---LSAKLEPSGR--TSLPGGPADIVRQVGAVGGSSDSCPL--SVPSLAL 628
Query: 441 HKASPTRDLENLSLSELIAETIDVDNSQIKKESFEVSLSEV----RSPGIDSNIDLSVLI 496
H DL S + + + + D S+ KK S S+ + PG++S V
Sbjct: 629 HAG----DLSLASHNAVSSLPLSFDKSEGKKRKNSSSSSKACKITKMPGMNS-----VHK 679
Query: 497 KNPDFVPKPVVDPSIAPSSRTKVLSSKLGKNSNFA 531
KNP + PV DP + SSR ++GKNS+ A
Sbjct: 680 KNPPSLLAPVPDPVNSTSSR------QVGKNSSLA 708
>gi|153251840 zinc finger protein 839 [Homo sapiens]
Length = 927
Score = 35.4 bits (80), Expect = 0.16
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 124 RVQSLKDKNEATVSTGKIAKGVLFSSSEVSADNVQSSYPQSANH--LDYSS---KPFDFA 178
R K K+ + T +A G L S + S V+ Q H D SS +P F
Sbjct: 255 RPPKYKAKDYKFIKTEDLADGHLSDSDDYSELCVEEDEDQRERHALFDLSSCSLRPKSFK 314
Query: 179 ------SSVGKYGLSHNSSV-PTHCLLHRKKKLDTRKSEKKLESCKLTKELSLANLIHDM 231
S +GK GL+ + + P H L + L + S L C + LSL +L M
Sbjct: 315 CQTCEKSYIGKGGLARHFKLNPGHGQLDPEMVLSEKASGSTLRGCTEERTLSLTSLGLSM 374
Query: 232 SRDSCE 237
D CE
Sbjct: 375 PADPCE 380
>gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo
sapiens]
Length = 823
Score = 33.1 bits (74), Expect = 0.80
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 197 LLHRKKKLDTRKSEKKLESCKLTKELSLANLIHDMSRDSCESQPSVRLSSTDSLESLLSK 256
+L++K + + + EK+ + K+L +M + + P+ + + ++ L+ +
Sbjct: 454 MLYKKNREELERKEKQYKKEVEAKQLEPTVQSLEMKSKTARNTPNRDFHNHEEMKGLMDE 513
Query: 257 N--LDADLLRPHASECISKDDSAFKEIPDLKTI-IIKGTTPNNSLYIQNN 303
N L AD+ C K+D+ KE LK I I+K T YI+ N
Sbjct: 514 NCILKADIAILRQEICTMKNDNLEKENKYLKDIKIVKETNAALEKYIKLN 563
>gi|60115723 ankyrin repeat domain 20 family, member A2 [Homo
sapiens]
Length = 823
Score = 33.1 bits (74), Expect = 0.80
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 197 LLHRKKKLDTRKSEKKLESCKLTKELSLANLIHDMSRDSCESQPSVRLSSTDSLESLLSK 256
+L++K + + + EK+ + K+L +M + + P+ + + ++ L+ +
Sbjct: 454 MLYKKNREELERKEKQYKKEVEAKQLEPTVQSLEMKSKTARNTPNRDFHNHEEMKGLMDE 513
Query: 257 N--LDADLLRPHASECISKDDSAFKEIPDLKTI-IIKGTTPNNSLYIQNN 303
N L AD+ C K+D+ KE LK I I+K T YI+ N
Sbjct: 514 NCILKADIAILRQEICTMKNDNLEKENKYLKDIKIVKETNAALEKYIKLN 563
>gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo
sapiens]
Length = 823
Score = 33.1 bits (74), Expect = 0.80
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 197 LLHRKKKLDTRKSEKKLESCKLTKELSLANLIHDMSRDSCESQPSVRLSSTDSLESLLSK 256
+L++K + + + EK+ + K+L +M + + P+ + + ++ L+ +
Sbjct: 454 MLYKKNREELERKEKQYKKEVEAKQLEPTVQSLEMKSKTARNTPNWDFHNHEEMKGLMDE 513
Query: 257 N--LDADLLRPHASECISKDDSAFKEIPDLKTI-IIKGTTPNNSLYIQNN 303
N L AD+ C K+D+ KE LK I I+K T YI+ N
Sbjct: 514 NCILKADIAILRQEICTMKNDNLEKENKYLKDIKIVKETNAALEKYIKLN 563
>gi|149363679 ankyrin repeat domain 20 family, member A4 [Homo
sapiens]
Length = 823
Score = 33.1 bits (74), Expect = 0.80
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 197 LLHRKKKLDTRKSEKKLESCKLTKELSLANLIHDMSRDSCESQPSVRLSSTDSLESLLSK 256
+L++K + + + EK+ + K+L +M + + P+ + + ++ L+ +
Sbjct: 454 MLYKKNREELERKEKQYKKEVEAKQLEPTVQSLEMKSKTARNTPNWDFHNHEEMKGLMDE 513
Query: 257 N--LDADLLRPHASECISKDDSAFKEIPDLKTI-IIKGTTPNNSLYIQNN 303
N L AD+ C K+D+ KE LK I I+K T YI+ N
Sbjct: 514 NCILKADIAILRQEICTMKNDNLEKENKYLKDIKIVKETNAALEKYIKLN 563
>gi|30795196 LIM homeobox protein 2 [Homo sapiens]
Length = 406
Score = 32.7 bits (73), Expect = 1.0
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Query: 398 CNQSSASFTDLSLGSFPLSQLANRCQSSPGISELTGSLSSLAFHKASPTRDLENLSLSEL 457
CN++ A D +P SQ R ++S +L S A + +DL+ L+
Sbjct: 246 CNENDAEHLDRDQ-PYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTG 304
Query: 458 IAETIDVDNSQIKKESFEVSLSEVRSPGIDSNIDLSVLIKNPDFVPKPVVDPSIAPSSRT 517
+ + + Q + F +L + G+D + D ++ P + + S++PSS
Sbjct: 305 LTKRVLQVWFQNARAKFRRNLLRQENTGVDKSTDAALQTGTPSGPASELSNASLSPSSTP 364
Query: 518 KVLS 521
L+
Sbjct: 365 TTLT 368
>gi|24430212 interleukin 23 receptor precursor [Homo sapiens]
Length = 629
Score = 32.3 bits (72), Expect = 1.4
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 17/113 (15%)
Query: 274 DDSAFKEIPDLKTII---IKGTTPNNSLYIQNNSLSDFQNIPVQDSLGSSNNPLYLTSSL 330
D++ IPDL T I P S NN ++ P DSL S NNP
Sbjct: 470 DNTTVVYIPDLNTGYKPQISNFLPEGSHLSNNNEITSLTLKPPVDSLDSGNNPRLQKHPN 529
Query: 331 ENMTVDNLNASKET-EVGNVSLVEQSAKNHTFKNDNLQFSQCESPSLTELFQE 382
+V ++N+ T +G +SL+ L +C SP + +E
Sbjct: 530 FAFSVSSVNSLSNTIFLGELSLI-------------LNQGECSSPDIQNSVEE 569
>gi|46359075 zinc finger protein 423 [Homo sapiens]
Length = 1284
Score = 32.3 bits (72), Expect = 1.4
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 171 SSKPFDFASSVGKYGLSHNSSVPTHCLLHRKKKLDTRKSEKK 212
SSKPF +V K G S SS+ +H H+K K KSEK+
Sbjct: 218 SSKPFK--CTVCKRGFSSTSSLQSHMQAHKKNKEHLAKSEKE 257
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 32.3 bits (72), Expect = 1.4
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 6/183 (3%)
Query: 394 LSDLCNQSSASFTDLSLGSFPLSQLANRCQSSPGISELTGSLSSLAFHKASPTRDLENLS 453
L+ L + SA +LG Q + G E +G +SL + + +D E L
Sbjct: 1009 LARLERRHSALQRHSTLGMEIEEQRQKLASLNSGSREQSGLQASLEAEQEALEKDQERLE 1068
Query: 454 --LSELIAETIDVDNSQIKKESFEVSLSEVRSPGIDSNIDLSVLIKNPDFVPKPVVDPSI 511
+ +L + +VD ++K+ +V S + + + S L+ D ++ +
Sbjct: 1069 YEIQQLKQKIYEVDG--VQKDHHGTLEGKVASSSLPVSAEKSHLVPLMDARINAYIEEEV 1126
Query: 512 APSSRT--KVLSSKLGKNSNFAKDNKKNNKGSLTRKPPFSLSWTKALAARPSAFASTLCL 569
+ +V+S +++ KDN+K + G++ RK + +++L A P + +
Sbjct: 1127 QRRLQDLHRVISEGCSTSADTMKDNEKLHNGTIQRKLKYERMVSRSLGANPDDLKDPIKI 1186
Query: 570 RYP 572
P
Sbjct: 1187 SIP 1189
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 32.3 bits (72), Expect = 1.4
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 251 ESLLSKNLDADLLRPHASECISKDDSAFKEIPDLKTIIIKGTTPNNSLYIQNNSLSDFQN 310
+ L S+ D +LR + +++ + PDL+ I+ + + ++ ++Q+ + F
Sbjct: 403 KELSSETFDKTILRALNQGSLKREE---RRHPDLEPILRQLFSSSSQAFLQSQKVHSFFQ 459
Query: 311 IPVQDSLGSSNN---PLYLTSSLENMTVDNLNA-SKETEVGNVSLVEQSAKNHTFKNDNL 366
DSL S NN L + LE++ D+ A S+E +V +++ K HT K+ +
Sbjct: 460 SISSDSLHSINNLQSSLKTSKILEHLKEDSSEASSQEEDVLQHAIIH---KKHTGKSPIV 516
Query: 367 QFSQCESPSLTELFQEHKENN 387
L L ++ E N
Sbjct: 517 NNIGTSCSPLDGLTMQYSEQN 537
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 32.0 bits (71), Expect = 1.8
Identities = 61/299 (20%), Positives = 114/299 (38%), Gaps = 35/299 (11%)
Query: 197 LLHRKKKLDTRKSEKKLESCKL----TKELSLANLIHDMSRDSCESQPSVRLSSTDSLES 252
LL K L+ + + S KL + L L +HDM + R +E
Sbjct: 356 LLETKTMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEME--------RDMDRKKIEE 407
Query: 253 LLSKNLDADLLRPHASECISKDDSAFK--EIPDLKTIIIKGTTPNNSLYIQNNSLSDFQN 310
L+ +N+ ++ + S D+S E+ + P SL + N L+ +
Sbjct: 408 LMEENMTLEMAQKQ-----SMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRL 462
Query: 311 IPVQ---DSLGSSNNPLYLT--------SSLENMTVDNLNASKETEVGNVSLVE--QSAK 357
+ ++ SL + L T S + M +N SK+ E+ +V+ QS +
Sbjct: 463 LKLEMENQSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKKVEILENEIVQEKQSLQ 522
Query: 358 NHTFKNDNLQFSQCESPSLTELFQEHKENNISQCFTLSDLCNQSSASFTDLSLGSFPLSQ 417
N + +L + + E +E+ E I ++ NQ+ +S S S
Sbjct: 523 NCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARV 582
Query: 418 LANRCQSS---PGISELTGSLSSLAFHKASPTRDLENLSLSELIAETIDVDNSQIKKES 473
++ I E + LS + F K ++LE+ AE ++ + ++KE+
Sbjct: 583 KDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKEN 641
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 32.0 bits (71), Expect = 1.8
Identities = 61/299 (20%), Positives = 114/299 (38%), Gaps = 35/299 (11%)
Query: 197 LLHRKKKLDTRKSEKKLESCKL----TKELSLANLIHDMSRDSCESQPSVRLSSTDSLES 252
LL K L+ + + S KL + L L +HDM + R +E
Sbjct: 356 LLETKTMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEME--------RDMDRKKIEE 407
Query: 253 LLSKNLDADLLRPHASECISKDDSAFK--EIPDLKTIIIKGTTPNNSLYIQNNSLSDFQN 310
L+ +N+ ++ + S D+S E+ + P SL + N L+ +
Sbjct: 408 LMEENMTLEMAQKQ-----SMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRL 462
Query: 311 IPVQ---DSLGSSNNPLYLT--------SSLENMTVDNLNASKETEVGNVSLVE--QSAK 357
+ ++ SL + L T S + M +N SK+ E+ +V+ QS +
Sbjct: 463 LKLEMENQSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKKVEILENEIVQEKQSLQ 522
Query: 358 NHTFKNDNLQFSQCESPSLTELFQEHKENNISQCFTLSDLCNQSSASFTDLSLGSFPLSQ 417
N + +L + + E +E+ E I ++ NQ+ +S S S
Sbjct: 523 NCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARV 582
Query: 418 LANRCQSS---PGISELTGSLSSLAFHKASPTRDLENLSLSELIAETIDVDNSQIKKES 473
++ I E + LS + F K ++LE+ AE ++ + ++KE+
Sbjct: 583 KDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKEN 641
>gi|38327034 ubiquitination factor E4B isoform 2 [Homo sapiens]
Length = 1173
Score = 32.0 bits (71), Expect = 1.8
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 416 SQLANRCQSSPGISELTGSLSSLAFHKASPTRDLENLSLSELIAETIDVDNSQIKKESFE 475
S +A+R QSS G+S L+ +SP+ LE S S ++++D+D +K +
Sbjct: 70 SGVAHRSQSSEGVSSLS----------SSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQ 119
Query: 476 VSL-SEVRSPGIDSN 489
V + S + + +D N
Sbjct: 120 VDVDSGIENMEVDEN 134
>gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens]
Length = 1302
Score = 32.0 bits (71), Expect = 1.8
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 416 SQLANRCQSSPGISELTGSLSSLAFHKASPTRDLENLSLSELIAETIDVDNSQIKKESFE 475
S +A+R QSS G+S L+ +SP+ LE S S ++++D+D +K +
Sbjct: 70 SGVAHRSQSSEGVSSLS----------SSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQ 119
Query: 476 VSL-SEVRSPGIDSN 489
V + S + + +D N
Sbjct: 120 VDVDSGIENMEVDEN 134
>gi|237681119 breast cancer 1, early onset isoform 2 [Homo sapiens]
Length = 1884
Score = 31.6 bits (70), Expect = 2.3
Identities = 60/265 (22%), Positives = 104/265 (39%), Gaps = 29/265 (10%)
Query: 150 SEVSADNVQSSY---PQSANHLDYSSKPFDFASSVGKYGLSHNSSVPTHCLLHRKKKLDT 206
S +S +N++ + S+N + S + SS+ + G S + ++ +R KL+
Sbjct: 1024 STISRNNIRENVFKEASSSNINEVGSSTNEVGSSINEIG-SSDENIQAELGRNRGPKLNA 1082
Query: 207 RKSEKKLESCKLTKELSLANLIHDMSRDSCESQPSVRLSSTDSLESLLSKNLDADLLRPH 266
L+ + L +N H + E + V+ +TD L+S NL+ + H
Sbjct: 1083 MLRLGVLQPEVYKQSLPGSNCKHPEIKKQ-EYEEVVQTVNTDFSPYLISDNLEQPMGSSH 1141
Query: 267 ASECISK------DDSAFKEIPDLKTIIIKGTTPNNSLYIQNNSLSDFQNIPVQDSL--G 318
AS+ S+ DD KE IK ++ S +Q LS + L G
Sbjct: 1142 ASQVCSETPDDLLDDGEIKEDTSFAENDIKESSAVFSKSVQKGELSRSPSPFTHTHLAQG 1201
Query: 319 SSNNPLYLTSSLENMTVDN--LNASKETEVGNVSLVEQSAKNHTFKNDNLQFSQCESPSL 376
L SS EN++ ++ L + G V+ + + H S
Sbjct: 1202 YRRGAKKLESSEENLSSEDEELPCFQHLLFGKVNNIPSQSTRH-------------STVA 1248
Query: 377 TELFQEHKENN-ISQCFTLSDLCNQ 400
TE ++ E N +S +L+D NQ
Sbjct: 1249 TECLSKNTEENLLSLKNSLNDCSNQ 1273
>gi|20302168 toll-like receptor 8 [Homo sapiens]
Length = 1041
Score = 31.6 bits (70), Expect = 2.3
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 278 FKEIPDLKTIIIKGTTPNNSLYIQNNSLSDFQNIPVQDSLGSSNNPLYLTSSLENMTVDN 337
F+ +PD+ + + + L S ++F IP L +NN L D
Sbjct: 501 FENLPDIACLNLSANSNAQVL-----SGTEFSAIPHVKYLDLTNNRL-----------DF 544
Query: 338 LNASKETEVGNVSLVEQSAKNHTFK----NDNLQFSQCESPSLTELFQEHKENNISQCFT 393
NAS TE+ ++ +++ S +H F+ +L+F Q +L L H NNI +T
Sbjct: 545 DNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQ-NFTNLKVLNLSH--NNI---YT 598
Query: 394 LSDLCNQSSASFTDLSLGSFPLSQLANRCQSS-----PGISELTGSLSSLAFHKASPTRD 448
L+D N S S +L L L N + G+ LT SL K P
Sbjct: 599 LTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEA 658
Query: 449 LENL--SLSEL 457
NL SL+EL
Sbjct: 659 FLNLPASLTEL 669
>gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens]
Length = 1816
Score = 31.6 bits (70), Expect = 2.3
Identities = 60/265 (22%), Positives = 104/265 (39%), Gaps = 29/265 (10%)
Query: 150 SEVSADNVQSSY---PQSANHLDYSSKPFDFASSVGKYGLSHNSSVPTHCLLHRKKKLDT 206
S +S +N++ + S+N + S + SS+ + G S + ++ +R KL+
Sbjct: 977 STISRNNIRENVFKEASSSNINEVGSSTNEVGSSINEIG-SSDENIQAELGRNRGPKLNA 1035
Query: 207 RKSEKKLESCKLTKELSLANLIHDMSRDSCESQPSVRLSSTDSLESLLSKNLDADLLRPH 266
L+ + L +N H + E + V+ +TD L+S NL+ + H
Sbjct: 1036 MLRLGVLQPEVYKQSLPGSNCKHPEIKKQ-EYEEVVQTVNTDFSPYLISDNLEQPMGSSH 1094
Query: 267 ASECISK------DDSAFKEIPDLKTIIIKGTTPNNSLYIQNNSLSDFQNIPVQDSL--G 318
AS+ S+ DD KE IK ++ S +Q LS + L G
Sbjct: 1095 ASQVCSETPDDLLDDGEIKEDTSFAENDIKESSAVFSKSVQKGELSRSPSPFTHTHLAQG 1154
Query: 319 SSNNPLYLTSSLENMTVDN--LNASKETEVGNVSLVEQSAKNHTFKNDNLQFSQCESPSL 376
L SS EN++ ++ L + G V+ + + H S
Sbjct: 1155 YRRGAKKLESSEENLSSEDEELPCFQHLLFGKVNNIPSQSTRH-------------STVA 1201
Query: 377 TELFQEHKENN-ISQCFTLSDLCNQ 400
TE ++ E N +S +L+D NQ
Sbjct: 1202 TECLSKNTEENLLSLKNSLNDCSNQ 1226
>gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens]
Length = 1863
Score = 31.6 bits (70), Expect = 2.3
Identities = 60/265 (22%), Positives = 104/265 (39%), Gaps = 29/265 (10%)
Query: 150 SEVSADNVQSSY---PQSANHLDYSSKPFDFASSVGKYGLSHNSSVPTHCLLHRKKKLDT 206
S +S +N++ + S+N + S + SS+ + G S + ++ +R KL+
Sbjct: 1024 STISRNNIRENVFKEASSSNINEVGSSTNEVGSSINEIG-SSDENIQAELGRNRGPKLNA 1082
Query: 207 RKSEKKLESCKLTKELSLANLIHDMSRDSCESQPSVRLSSTDSLESLLSKNLDADLLRPH 266
L+ + L +N H + E + V+ +TD L+S NL+ + H
Sbjct: 1083 MLRLGVLQPEVYKQSLPGSNCKHPEIKKQ-EYEEVVQTVNTDFSPYLISDNLEQPMGSSH 1141
Query: 267 ASECISK------DDSAFKEIPDLKTIIIKGTTPNNSLYIQNNSLSDFQNIPVQDSL--G 318
AS+ S+ DD KE IK ++ S +Q LS + L G
Sbjct: 1142 ASQVCSETPDDLLDDGEIKEDTSFAENDIKESSAVFSKSVQKGELSRSPSPFTHTHLAQG 1201
Query: 319 SSNNPLYLTSSLENMTVDN--LNASKETEVGNVSLVEQSAKNHTFKNDNLQFSQCESPSL 376
L SS EN++ ++ L + G V+ + + H S
Sbjct: 1202 YRRGAKKLESSEENLSSEDEELPCFQHLLFGKVNNIPSQSTRH-------------STVA 1248
Query: 377 TELFQEHKENN-ISQCFTLSDLCNQ 400
TE ++ E N +S +L+D NQ
Sbjct: 1249 TECLSKNTEENLLSLKNSLNDCSNQ 1273
>gi|110611228 utrophin [Homo sapiens]
Length = 3433
Score = 31.6 bits (70), Expect = 2.3
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 305 LSDFQNIPVQDSLGSSNNPLYLTSSLENMTVDNLNASKETE-VGNVSLVEQSAKNHTFKN 363
LS +P Q S+ + P Y+ + D+ ++ + + +++ V SA K
Sbjct: 2810 LSTSVQLPWQRSISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKI 2869
Query: 364 DNLQFSQC----ESPSLTELFQEHKENNISQCFTLSDLCNQSSASFTDL 408
LQ + C E + E+F++HK N Q ++ D+ N + ++ L
Sbjct: 2870 RRLQKALCLDLLELSTTNEIFKQHKLNQNDQLLSVPDVINCLTTTYDGL 2918
>gi|12056971 anaphase promoting complex subunit 1 [Homo sapiens]
Length = 1944
Score = 31.6 bits (70), Expect = 2.3
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 28/130 (21%)
Query: 348 NVSLVEQSAKNHTFK-----NDNLQFSQCES-PSLTELFQEH-----------KENNISQ 390
N+S QS K H+ N N F E+ P + EL +H K + S+
Sbjct: 370 NISSHNQSPKRHSISHSPNSNSNGSFLAPETEPIVPELCIDHLWTETITNIREKNSQASK 429
Query: 391 CFTLSDLCNQSSASFTDLSLGSFPLSQLANRC----QSSPGISELTGSLSSLAFHKASPT 446
F SDLC Q F SQL RC +S+ + GS++++ A+P
Sbjct: 430 VFITSDLCGQKFLCF-------LVESQLQLRCVKFQESNDKTQLIFGSVTNIPAKDAAPV 482
Query: 447 RDLENLSLSE 456
++ + + E
Sbjct: 483 EKIDTMLVLE 492
>gi|31559815 keratin 26 [Homo sapiens]
Length = 468
Score = 31.6 bits (70), Expect = 2.3
Identities = 45/212 (21%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 278 FKEIPDLKTIIIKGTTPNNSLYIQNNS---LSDFQNIPVQDSLGSSNNPLYLTSSLENMT 334
F I DLK I T N S+ +QN++ +D + ++ L ++ TS L +
Sbjct: 138 FSVIEDLKRQITSATICNASIVLQNDNARLTADDFRLKYENELALHHSVEADTSGLRRVL 197
Query: 335 VDNLNASKETEVGNVSLVEQSA---KNHTFKNDNLQFSQCESPSLTELFQEHKENNISQC 391
+ + + E+ +L E+ K+H + + LQ++ + ++ E N +
Sbjct: 198 DELTLCTTDLEIQCETLSEELTYLKKSHEEEMEVLQYTAGGNVNV--------EMNATPG 249
Query: 392 FTLSDLCNQSSASFTDLSLGSFPLSQLANRCQSSPGISELTGSL-SSLAFHKASPTRDLE 450
L+ L N A + DL+ NR + +E + +L ++ H+ + T
Sbjct: 250 VDLTVLLNNMRAEYEDLA--------EQNRKDAEAWFNERSATLQQQISDHEGAATAARN 301
Query: 451 NLSLSELIAETIDVDNSQIK--KESFEVSLSE 480
L+ + +T++++ + K S+E SL+E
Sbjct: 302 ELTELKRNLQTLEIELQSLMAVKHSYECSLAE 333
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,509,973
Number of Sequences: 37866
Number of extensions: 972994
Number of successful extensions: 2644
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 2604
Number of HSP's gapped (non-prelim): 79
length of query: 632
length of database: 18,247,518
effective HSP length: 108
effective length of query: 524
effective length of database: 14,157,990
effective search space: 7418786760
effective search space used: 7418786760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.