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Search of human proteins with 223555958
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223555958 transmembrane protein 64 isoform 1 [Homo sapiens]
(380 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223555958 transmembrane protein 64 isoform 1 [Homo sapiens] 753 0.0
gi|226371762 transmembrane protein 64 isoform 2 [Homo sapiens] 629 e-180
gi|34486092 adenylate cyclase 5 [Homo sapiens] 50 4e-06
gi|122937424 one cut homeobox 3 [Homo sapiens] 44 3e-04
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens] 41 0.002
gi|12707580 paired-like homeobox 2b [Homo sapiens] 40 0.003
gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo... 40 0.003
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 40 0.005
gi|4505531 oxysterol binding protein [Homo sapiens] 39 0.008
gi|38373693 Sp3 transcription factor isoform 1 [Homo sapiens] 39 0.010
gi|4504809 jun B proto-oncogene [Homo sapiens] 38 0.017
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 38 0.017
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 38 0.017
gi|4503489 ephrin-B3 precursor [Homo sapiens] 38 0.017
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 37 0.029
gi|157266326 oculocutaneous albinism II [Homo sapiens] 37 0.038
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 37 0.038
gi|239758021 PREDICTED: hypothetical protein [Homo sapiens] 36 0.050
gi|239741335 PREDICTED: hypothetical protein XP_002342177 [Homo ... 36 0.050
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 36 0.050
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 36 0.050
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 36 0.050
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 36 0.050
gi|5031613 growth differentiation factor 11 precursor [Homo sapi... 36 0.066
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 36 0.066
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 36 0.066
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 36 0.066
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso... 36 0.066
gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isof... 36 0.066
gi|4506783 Sin3A-associated protein, 30kDa [Homo sapiens] 36 0.066
>gi|223555958 transmembrane protein 64 isoform 1 [Homo sapiens]
Length = 380
Score = 753 bits (1943), Expect = 0.0
Identities = 380/380 (100%), Positives = 380/380 (100%)
Query: 1 MRSPGGILLQALPRLLQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAA 60
MRSPGGILLQALPRLLQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAA
Sbjct: 1 MRSPGGILLQALPRLLQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAA 60
Query: 61 ASGALLGAYLERHGPPEASELPEPGGALAGGPGSGGGGVVVGVAEVRNWRCCCLGSTCWC 120
ASGALLGAYLERHGPPEASELPEPGGALAGGPGSGGGGVVVGVAEVRNWRCCCLGSTCWC
Sbjct: 61 ASGALLGAYLERHGPPEASELPEPGGALAGGPGSGGGGVVVGVAEVRNWRCCCLGSTCWC 120
Query: 121 RSLVLVCVLAALCFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIV 180
RSLVLVCVLAALCFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIV
Sbjct: 121 RSLVLVCVLAALCFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIV 180
Query: 181 LNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEG 240
LNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEG
Sbjct: 181 LNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEG 240
Query: 241 GSGLKVVALARLTPIPFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTME 300
GSGLKVVALARLTPIPFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTME
Sbjct: 241 GSGLKVVALARLTPIPFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTME 300
Query: 301 DVIAEQSVSGYFVFCLQIIISIGLMFYVVHRAQVELNAAIVACEMELKSSLVKGNQPNTS 360
DVIAEQSVSGYFVFCLQIIISIGLMFYVVHRAQVELNAAIVACEMELKSSLVKGNQPNTS
Sbjct: 301 DVIAEQSVSGYFVFCLQIIISIGLMFYVVHRAQVELNAAIVACEMELKSSLVKGNQPNTS 360
Query: 361 GSSFYNKRTLTFSGGGINVV 380
GSSFYNKRTLTFSGGGINVV
Sbjct: 361 GSSFYNKRTLTFSGGGINVV 380
>gi|226371762 transmembrane protein 64 isoform 2 [Homo sapiens]
Length = 328
Score = 629 bits (1621), Expect = e-180
Identities = 328/380 (86%), Positives = 328/380 (86%), Gaps = 52/380 (13%)
Query: 1 MRSPGGILLQALPRLLQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAA 60
MRSPGGILLQALPRLLQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAA
Sbjct: 1 MRSPGGILLQALPRLLQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAA 60
Query: 61 ASGALLGAYLERHGPPEASELPEPGGALAGGPGSGGGGVVVGVAEVRNWRCCCLGSTCWC 120
ASGALLGAYLERHGPPEASELPEPGGALAGGPGSGGGGVVVGVAEVRNWRCCCLGSTCWC
Sbjct: 61 ASGALLGAYLERHGPPEASELPEPGGALAGGPGSGGGGVVVGVAEVRNWRCCCLGSTCWC 120
Query: 121 RSLVLVCVLAALCFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIV 180
RSLVLVCVLAALCFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIV
Sbjct: 121 RSLVLVCVLAALCFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIV 180
Query: 181 LNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEG 240
LNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEG
Sbjct: 181 LNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEG 240
Query: 241 GSGLKVVALARLTPIPFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTME 300
GSGLKVVALARLTPIPFGLQNAVFSI
Sbjct: 241 GSGLKVVALARLTPIPFGLQNAVFSI---------------------------------- 266
Query: 301 DVIAEQSVSGYFVFCLQIIISIGLMFYVVHRAQVELNAAIVACEMELKSSLVKGNQPNTS 360
IISIGLMFYVVHRAQVELNAAIVACEMELKSSLVKGNQPNTS
Sbjct: 267 ------------------IISIGLMFYVVHRAQVELNAAIVACEMELKSSLVKGNQPNTS 308
Query: 361 GSSFYNKRTLTFSGGGINVV 380
GSSFYNKRTLTFSGGGINVV
Sbjct: 309 GSSFYNKRTLTFSGGGINVV 328
>gi|34486092 adenylate cyclase 5 [Homo sapiens]
Length = 1261
Score = 49.7 bits (117), Expect = 4e-06
Identities = 86/316 (27%), Positives = 128/316 (40%), Gaps = 69/316 (21%)
Query: 35 RGAGGDGPADRLPRGGGASAAAAAAAASG------ALLGAYLERHGPPEASELPEPGGAL 88
RGA G P GGG +AAAAA+A G ++ ER G A++ E GA+
Sbjct: 120 RGAASGGSTRAPPAGGGGGSAAAAASAGGTEVRPRSVEVGLEERRGKGRAADELE-AGAV 178
Query: 89 AGGPGSGGGGVV------VGVAEVRNWRCCCLGSTCWCRSLVLVCVLAALCFASLALVRR 142
GG GSG GG G V + CC L L+ + + F S L R
Sbjct: 179 EGGEGSGDGGSSADSGSGAGPGAVLSLGACC---------LALLQIFRSKKFPSDKLERL 229
Query: 143 YLHHLLLWVESLDSLLGVLLFVVGFIVVSF-----PCGWGYIVLNVAAGYLYGFVLGMGL 197
Y + +S ++L +L +V ++++F P Y+ + AA
Sbjct: 230 YQRYFFRLNQSSLTMLMAVLVLVCLVMLAFHAARPPLQLPYLAVLAAA------------ 277
Query: 198 MMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLS--AVIRVVEGGSGLKVVALARLTPI 255
VGV++ I V+C R AA Q L+ A+I VV L V + L P
Sbjct: 278 --VGVIL---IMAVLCNR------AAFHQDHMGLACYALIAVV-----LAVQVVGLLLPQ 321
Query: 256 PFGLQNAV-----FSITDLSLPNYLMASSV--GLLPTQLLNSYLGTTLRT--MEDVIAEQ 306
P + F T +L M ++V G+L + L +L LRT + + +Q
Sbjct: 322 PRSASEGIWWTVFFIYTIYTLLPVRMRAAVLSGVLLSAL---HLAIALRTNAQDQFLLKQ 378
Query: 307 SVSGYFVFCLQIIISI 322
VS +F I+ +
Sbjct: 379 LVSNVLIFSCTNIVGV 394
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 43.5 bits (101), Expect = 3e-04
Identities = 35/87 (40%), Positives = 37/87 (42%), Gaps = 17/87 (19%)
Query: 18 HAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPE 77
HAAL G AE LP G GG G G G+ +AA A G L A HGP
Sbjct: 248 HAALLGRAEDALARGLPGGGGGTGSG-----GAGSGSAAGLLAPLGGLAAA--GAHGP-- 298
Query: 78 ASELPEPGGALAGGPGSGGGGVVVGVA 104
GG GGPG GGG G A
Sbjct: 299 ------HGG--GGGPGGSGGGPSAGAA 317
>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
Length = 681
Score = 40.8 bits (94), Expect = 0.002
Identities = 39/112 (34%), Positives = 48/112 (42%), Gaps = 30/112 (26%)
Query: 15 LLQHAALPGLAELPARWALPRGAGGDGP-------ADRLPRGGGASAAAAAAAASGALLG 67
+L H A P LA LP P+G G GP A R PR GG A+A + S + G
Sbjct: 399 VLNHGAAPLLA-LP-----PQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKEMTG 452
Query: 68 AYL-----ERHGPPEASEL------------PEPGGALAGGPGSGGGGVVVG 102
A L PP+ S+ P PG A AGG G+ G G+ G
Sbjct: 453 ARLWAQDGSEDEPPKDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPG 504
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 40.4 bits (93), Expect = 0.003
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 16/81 (19%)
Query: 28 PARWALPRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELPEPGGA 87
P+ P AG GP +GG A+AAAAAAAA+ A A+ G A
Sbjct: 218 PSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAA-------------AAAAAAGGLA 264
Query: 88 LAGGPGSG---GGGVVVGVAE 105
AGGPG G G G + + +
Sbjct: 265 AAGGPGQGWAPGPGPITSIPD 285
>gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo
sapiens]
Length = 323
Score = 40.0 bits (92), Expect = 0.003
Identities = 37/104 (35%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 25 AELPARWALPRGAG--GDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELP 82
A LPA A P A PA P A+AAAAAAAA+ A+ A L G P +
Sbjct: 196 APLPAATAHPAAAAHAAHHPAVHHPILPPAAAAAAAAAAAAAVSSASLPGSGLPSVGSIR 255
Query: 83 EPGG------ALAGGPGSGGGGVVVGVAEVRNWRCCCLGSTCWC 120
P G A A P GGGG ++W G C C
Sbjct: 256 PPHGLLKSPSAAAAAPLGGGGGGSGASGGFQHWG----GMPCPC 295
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 39.7 bits (91), Expect = 0.005
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
Query: 47 PRGGGASAAAAAAAASGALLGAYLERHG----PPEASELPEPGGALAGG-----PGSGGG 97
P G GA+AAAAAAAA+ A G PP++ +PGG G PG GGG
Sbjct: 184 PGGWGAAAAAAAAAAAAAAAAHLPSMAGGQQPPPQSLLYSQPGGFTVNGMLSAPPGPGGG 243
Query: 98 G 98
G
Sbjct: 244 G 244
Score = 39.7 bits (91), Expect = 0.005
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 49 GGGASAAAAAAAASGALLGAYLE-----RHGPPEASELPEPGGALAGG-------PGSGG 96
GG +AAAAAAAA+ A A+L + PP++ +PGG G PG GG
Sbjct: 185 GGWGAAAAAAAAAAAAAAAAHLPSMAGGQQPPPQSLLYSQPGGFTVNGMLSAPPGPGGGG 244
Query: 97 GG 98
GG
Sbjct: 245 GG 246
Score = 30.4 bits (67), Expect = 2.8
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 46 LPRGGGASAAAAAAAA------SGALLGAYLERHGPPEASELPEPGGALAGGPG 93
LP A+AAAAAAA SG+ +G PP+ P G + GG G
Sbjct: 101 LPHAAAAAAAAAAAAVEASSPWSGSAVGMAGSPQQPPQPPPPPPQGPDVKGGAG 154
>gi|4505531 oxysterol binding protein [Homo sapiens]
Length = 807
Score = 38.9 bits (89), Expect = 0.008
Identities = 26/65 (40%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 34 PRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELPEPGGALAGGPG 93
P GG G D P G AS AAAA G GA G A P P +GG G
Sbjct: 28 PVVGGGGGRGDAGPGSGAASGTVVAAAAGGPGPGA----GGVAAAGPAPAPPTGGSGGSG 83
Query: 94 SGGGG 98
+GG G
Sbjct: 84 AGGSG 88
Score = 33.1 bits (74), Expect = 0.43
Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Query: 35 RGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELPEPGGALAGGPGS 94
RG G GPA GGG + G GP + A AGGPG
Sbjct: 7 RGVVGPGPAAIAALGGGGAGPPVVGGGGGR------GDAGPGSGAASGTVVAAAAGGPGP 60
Query: 95 GGGGV 99
G GGV
Sbjct: 61 GAGGV 65
>gi|38373693 Sp3 transcription factor isoform 1 [Homo sapiens]
Length = 781
Score = 38.5 bits (88), Expect = 0.010
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 36 GAGGDGPADRLPR----GGGASAAAAAAAASG----ALLGAYLERHGPPEASELPEPGGA 87
G GG G + L + G GA AAAAAA + ALL A + GPP + E A
Sbjct: 24 GGGGGGHGEYLQQQQQHGNGAVAAAAAAQDTQPSPLALLAATCSKIGPPSPGDDEEEAAA 83
Query: 88 LAGGPGSGG 96
AG P + G
Sbjct: 84 AAGAPAAAG 92
>gi|4504809 jun B proto-oncogene [Homo sapiens]
Length = 347
Score = 37.7 bits (86), Expect = 0.017
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 17/115 (14%)
Query: 2 RSPGGILLQALPRLLQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAAA 61
R+PGG+ L +LL+ + LA+ P R GA G GP GGG S + +
Sbjct: 22 RAPGGLSLHDY-KLLKPSLAVNLAD-PYRSLKAPGARGPGPEG----GGGGSYFSGQGSD 75
Query: 62 SGA---LLGAYLERHGPPEASEL----PEPGGAL----AGGPGSGGGGVVVGVAE 105
+GA L + LER P ++ + P P G GG G G GG GV E
Sbjct: 76 TGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPRGGGSGGGAGGAGGGVTE 130
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 37.7 bits (86), Expect = 0.017
Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 15/63 (23%)
Query: 36 GAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELPEPGGALAGGPGSG 95
G G GPAD + GA+AAAAAAAA+ GA H P + PGS
Sbjct: 323 GGAGKGPADMASQCWGAAAAAAAAAAASG--GAQQRSHHAPMS-------------PGSS 367
Query: 96 GGG 98
GGG
Sbjct: 368 GGG 370
Score = 32.0 bits (71), Expect = 0.95
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 50 GGASAAAAAAAASGALLGAYLERHGP------PEASELPE----PGGALAGGPGSGGG 97
GG +AAAAAA A E GP P EL + GG GG GSGGG
Sbjct: 36 GGEAAAAAAAERGEMKAAAGQESEGPAVGPPQPLGKELQDGAESNGGGGGGGAGSGGG 93
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 37.7 bits (86), Expect = 0.017
Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 15/63 (23%)
Query: 36 GAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELPEPGGALAGGPGSG 95
G G GPAD + GA+AAAAAAAA+ GA H P + PGS
Sbjct: 323 GGAGKGPADMASQCWGAAAAAAAAAAASG--GAQQRSHHAPMS-------------PGSS 367
Query: 96 GGG 98
GGG
Sbjct: 368 GGG 370
Score = 32.0 bits (71), Expect = 0.95
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 50 GGASAAAAAAAASGALLGAYLERHGP------PEASELPE----PGGALAGGPGSGGG 97
GG +AAAAAA A E GP P EL + GG GG GSGGG
Sbjct: 36 GGEAAAAAAAERGEMKAAAGQESEGPAVGPPQPLGKELQDGAESNGGGGGGGAGSGGG 93
>gi|4503489 ephrin-B3 precursor [Homo sapiens]
Length = 340
Score = 37.7 bits (86), Expect = 0.017
Identities = 32/90 (35%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
Query: 18 HAALPGLAELPA---RWALPRGAGGDGPADRLPRGGGASAAAA-----AAAASGALLGAY 69
H+ PG LP A RGA G P +P GA+ A A A GA+ +
Sbjct: 194 HSLEPGKENLPGDPTSNATSRGAEGPLPPPSMPAVAGAAGGLALLLLGVAGAGGAM--CW 251
Query: 70 LERHGPPEASELPEPGGALAGGP-GSGGGG 98
R P S P PG GG G GGGG
Sbjct: 252 RRRRAKPSESRHPGPGSFGRGGSLGLGGGG 281
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 37.0 bits (84), Expect = 0.029
Identities = 31/84 (36%), Positives = 32/84 (38%), Gaps = 22/84 (26%)
Query: 15 LLQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHG 74
LL H + P LA L GAGG G A GGGA G G
Sbjct: 116 LLDHISSPSLA-------LMAGAGGAGAA---AGGGGAHDGPGGGGGPGG--------GG 157
Query: 75 PPEASELPEPGGALAGGPGSGGGG 98
P PGG GGPG GGGG
Sbjct: 158 GPGGG----PGGGGGGGPGGGGGG 177
>gi|157266326 oculocutaneous albinism II [Homo sapiens]
Length = 838
Score = 36.6 bits (83), Expect = 0.038
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 15 LLQHAALPGLAELPA-RWALPRGAGGDGPADRLPRGGGASAAAAAA 59
LLQ + GLAEL A + LPRGAGG P+ PRG ++ A A
Sbjct: 19 LLQTSVPSGLAELVAGKRRLPRGAGGADPSHSCPRGAAGQSSWAPA 64
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 36.6 bits (83), Expect = 0.038
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 16 LQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGP 75
L +A PG + + G + A + PRG G + +G +LGA +R P
Sbjct: 2047 LAPSATPGAPRIEQLDGVDDGTDSEAEAVQQPRGQGTPPSGPGVVRAG-VLGAAGDRARP 2105
Query: 76 PE--ASELPEPGGALAGGPGSGGGG 98
PE SE+ + GGPG GG G
Sbjct: 2106 PEDLPSEIVDFVLKNLGGPGDGGAG 2130
>gi|239758021 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 36.2 bits (82), Expect = 0.050
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 70 LERHGPPEAS-ELPEPGGALAGGPGSGGGGVVVGVAEVRNWRCCCLGSTCW 119
LE PPE + + E GG L G G+G GV +GV W CC L CW
Sbjct: 110 LEPQQPPELTLQQEETGGHLGGHLGAGHLGVHLGVHLGGGWHCCWL---CW 157
>gi|239741335 PREDICTED: hypothetical protein XP_002342177 [Homo
sapiens]
Length = 214
Score = 36.2 bits (82), Expect = 0.050
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 70 LERHGPPEAS-ELPEPGGALAGGPGSGGGGVVVGVAEVRNWRCCCLGSTCW 119
LE PPE + + E GG L G G+G GV +GV W CC L CW
Sbjct: 110 LEPQQPPELTLQQEETGGHLGGHLGAGHLGVHLGVHLGGGWHCCWL---CW 157
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 36.2 bits (82), Expect = 0.050
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 52 ASAAAAAAAASGALLGAYLERHGPPEASELPEPGGALAGGPGSGGGG 98
A+AAAAAAAA+ A + + R G S GG GG GSGGGG
Sbjct: 456 AAAAAAAAAAAAAAAVSAVHRGG---GSGSGGAGGGSGGGSGSGGGG 499
Score = 31.2 bits (69), Expect = 1.6
Identities = 27/77 (35%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 22 PGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASEL 81
PGL A P+ + PA A+AAAAAAA S G G S
Sbjct: 438 PGLVSPSAE---PQSSSNLSPA---AAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGG 491
Query: 82 PEPGGALAGGPGSGGGG 98
G GG G GGGG
Sbjct: 492 GSGSGGGGGGAGGGGGG 508
Score = 28.9 bits (63), Expect = 8.0
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 19/62 (30%)
Query: 51 GASAAAAAAAASG---ALLGAYLERHGPPEASEL-----------PEPGGALAG--GPGS 94
G++AAAAAAAA G A +G+Y GPP S PGG G GPG+
Sbjct: 87 GSAAAAAAAAALGPHAAHVGSY---SGPPFNSTRDFLFRSRGFGDSAPGGGQHGLFGPGA 143
Query: 95 GG 96
GG
Sbjct: 144 GG 145
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 36.2 bits (82), Expect = 0.050
Identities = 29/87 (33%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 13 PRLLQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAAASGALLG-AYLE 71
P LL PGL + PA A A A +SAAAA A SG + L
Sbjct: 332 PELLCSFRHPGLYQAPAAAAGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLS 391
Query: 72 RHGPPEASELPEPGGALAGGPGSGGGG 98
H A+ A G G GGGG
Sbjct: 392 CHSSQSAAAAAAAAAAALGSRGGGGGG 418
>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
Length = 330
Score = 36.2 bits (82), Expect = 0.050
Identities = 26/68 (38%), Positives = 28/68 (41%), Gaps = 14/68 (20%)
Query: 32 ALPRGAGGDGP-ADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELPEPGGALAG 90
A GAGG G P G G A A + G L G+Y ALAG
Sbjct: 63 AAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSY-------------NVNMALAG 109
Query: 91 GPGSGGGG 98
GPG GGGG
Sbjct: 110 GPGPGGGG 117
>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 6 [Homo sapiens]
Length = 1093
Score = 36.2 bits (82), Expect = 0.050
Identities = 35/94 (37%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 4 PGGILLQALPRLLQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAAASG 63
P LL L A PGL LP A P G A L AAAAAAAA
Sbjct: 992 PMASLLAGSSTPLLSAGTPGL--LPTASAPPLLPAGALVAPSLGNNTSLMAAAAAAAAVA 1049
Query: 64 ALLGAYLERHGPPEASELPEPGGALAGGPGSGGG 97
A GPP + P +L+G GSGGG
Sbjct: 1050 AA-------GGPPVLTAQTNPFLSLSGAEGSGGG 1076
>gi|5031613 growth differentiation factor 11 precursor [Homo
sapiens]
Length = 407
Score = 35.8 bits (81), Expect = 0.066
Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 34 PRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELPEPGG 86
PRG +GPA AAAAAAA+ A G ER P S PEP G
Sbjct: 20 PRGEAAEGPA-----------AAAAAAAAAAAAGVGGERSSRPAPSVAPEPDG 61
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 35.8 bits (81), Expect = 0.066
Identities = 29/86 (33%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 16 LQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGP 75
LQ AA+ A L A A A G A G G A +GA GA GP
Sbjct: 318 LQEAAVVAAASLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKGP 377
Query: 76 PEASELPEP-----GGALAGGPGSGG 96
+P P GG L PG GG
Sbjct: 378 RSYPVIPVPSKGSFGGVLQKFPGCGG 403
Score = 32.0 bits (71), Expect = 0.95
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 52 ASAAAAAAAASGALLGAYLERHGPPEASELPEPGGALAGGP 92
A AAAAA A G LLG +L PP P P LAG P
Sbjct: 263 AVAAAAAVAGGGGLLGPHL-LGAPPPPPPPPPPLAELAGAP 302
Score = 32.0 bits (71), Expect = 0.95
Identities = 34/104 (32%), Positives = 36/104 (34%), Gaps = 10/104 (9%)
Query: 6 GILLQALPRLLQHAAL----PGLAELPARWALPRG------AGGDGPADRLPRGGGASAA 55
G L P LL+ A L PG A A A P G A G G P GG S
Sbjct: 496 GCALGESPALLRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGPGSGPPPPAGGAGSRD 555
Query: 56 AAAAAASGALLGAYLERHGPPEASELPEPGGALAGGPGSGGGGV 99
A + G G PP S GA A G G G V
Sbjct: 556 ALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRV 599
Score = 31.6 bits (70), Expect = 1.2
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 11/65 (16%)
Query: 34 PRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELPEPGGA-LAGGP 92
P G+GGD A P +AA A AAA+G+ P S +P P L G
Sbjct: 562 PGGSGGDCSAGSTPPADSVAAAGAGAAAAGS----------GPAGSRVPAPHHPHLLEGR 611
Query: 93 GSGGG 97
+GGG
Sbjct: 612 KAGGG 616
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 35.8 bits (81), Expect = 0.066
Identities = 29/86 (33%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 16 LQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGP 75
LQ AA+ A L A A A G A G G A +GA GA GP
Sbjct: 318 LQEAAVVAAASLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKGP 377
Query: 76 PEASELPEP-----GGALAGGPGSGG 96
+P P GG L PG GG
Sbjct: 378 RSYPVIPVPSKGSFGGVLQKFPGCGG 403
Score = 32.0 bits (71), Expect = 0.95
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 52 ASAAAAAAAASGALLGAYLERHGPPEASELPEPGGALAGGP 92
A AAAAA A G LLG +L PP P P LAG P
Sbjct: 263 AVAAAAAVAGGGGLLGPHL-LGAPPPPPPPPPPLAELAGAP 302
Score = 32.0 bits (71), Expect = 0.95
Identities = 34/104 (32%), Positives = 36/104 (34%), Gaps = 10/104 (9%)
Query: 6 GILLQALPRLLQHAAL----PGLAELPARWALPRG------AGGDGPADRLPRGGGASAA 55
G L P LL+ A L PG A A A P G A G G P GG S
Sbjct: 496 GCALGESPALLRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGPGSGPPPPAGGAGSRD 555
Query: 56 AAAAAASGALLGAYLERHGPPEASELPEPGGALAGGPGSGGGGV 99
A + G G PP S GA A G G G V
Sbjct: 556 ALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRV 599
Score = 31.6 bits (70), Expect = 1.2
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 11/65 (16%)
Query: 34 PRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELPEPGGA-LAGGP 92
P G+GGD A P +AA A AAA+G+ P S +P P L G
Sbjct: 562 PGGSGGDCSAGSTPPADSVAAAGAGAAAAGS----------GPAGSRVPAPHHPHLLEGR 611
Query: 93 GSGGG 97
+GGG
Sbjct: 612 KAGGG 616
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 35.8 bits (81), Expect = 0.066
Identities = 29/86 (33%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 16 LQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGP 75
LQ AA+ A L A A A G A G G A +GA GA GP
Sbjct: 318 LQEAAVVAAASLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKGP 377
Query: 76 PEASELPEP-----GGALAGGPGSGG 96
+P P GG L PG GG
Sbjct: 378 RSYPVIPVPSKGSFGGVLQKFPGCGG 403
Score = 32.0 bits (71), Expect = 0.95
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 52 ASAAAAAAAASGALLGAYLERHGPPEASELPEPGGALAGGP 92
A AAAAA A G LLG +L PP P P LAG P
Sbjct: 263 AVAAAAAVAGGGGLLGPHL-LGAPPPPPPPPPPLAELAGAP 302
Score = 32.0 bits (71), Expect = 0.95
Identities = 34/104 (32%), Positives = 36/104 (34%), Gaps = 10/104 (9%)
Query: 6 GILLQALPRLLQHAAL----PGLAELPARWALPRG------AGGDGPADRLPRGGGASAA 55
G L P LL+ A L PG A A A P G A G G P GG S
Sbjct: 496 GCALGESPALLRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGPGSGPPPPAGGAGSRD 555
Query: 56 AAAAAASGALLGAYLERHGPPEASELPEPGGALAGGPGSGGGGV 99
A + G G PP S GA A G G G V
Sbjct: 556 ALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRV 599
Score = 31.6 bits (70), Expect = 1.2
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 11/65 (16%)
Query: 34 PRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELPEPGGA-LAGGP 92
P G+GGD A P +AA A AAA+G+ P S +P P L G
Sbjct: 562 PGGSGGDCSAGSTPPADSVAAAGAGAAAAGS----------GPAGSRVPAPHHPHLLEGR 611
Query: 93 GSGGG 97
+GGG
Sbjct: 612 KAGGG 616
>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
isoform B' [Homo sapiens]
Length = 240
Score = 35.8 bits (81), Expect = 0.066
Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 24 LAELPARWALP-RGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELP 82
+ + PA A P RG GG P+G G AAAAAAA+ ++ GA + PP P
Sbjct: 120 MPQAPAGLAGPVRGVGGPSQQVMTPQGRGT-VAAAAAAATASIAGAPTQY--PPGRGGPP 176
Query: 83 EPGGALAGGPGSGG 96
P G A PG G
Sbjct: 177 PPMGRGAPPPGMMG 190
>gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isoform
B [Homo sapiens]
Length = 231
Score = 35.8 bits (81), Expect = 0.066
Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 24 LAELPARWALP-RGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELP 82
+ + PA A P RG GG P+G G AAAAAAA+ ++ GA + PP P
Sbjct: 120 MPQAPAGLAGPVRGVGGPSQQVMTPQGRGT-VAAAAAAATASIAGAPTQY--PPGRGGPP 176
Query: 83 EPGGALAGGPGSGG 96
P G A PG G
Sbjct: 177 PPMGRGAPPPGMMG 190
>gi|4506783 Sin3A-associated protein, 30kDa [Homo sapiens]
Length = 220
Score = 35.8 bits (81), Expect = 0.066
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 44 DRLPRGGGASAAAAAAAASGALLGAYLERHGPPEASELPEPGG-ALAGGPGSGGGG 98
D + RGG A+AA AA A+ A + G +E+P G + AG PG+ G G
Sbjct: 7 DEMSRGGDAAAAVAAVVAAAAAAASAGNGTGAGTGAEVPGAGAVSAAGPPGAAGPG 62
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.140 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,113,367
Number of Sequences: 37866
Number of extensions: 787487
Number of successful extensions: 9007
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 241
Number of HSP's that attempted gapping in prelim test: 7340
Number of HSP's gapped (non-prelim): 1260
length of query: 380
length of database: 18,247,518
effective HSP length: 104
effective length of query: 276
effective length of database: 14,309,454
effective search space: 3949409304
effective search space used: 3949409304
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.