Guide to the Human Genome
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Name: ZNF389 Sequence: fasta or formatted (269aa) NCBI GI: 223468648
Description:

zinc finger protein 389

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         12           1
 C cysteine            5.6         15           1
 D aspartate           2.2          6           1
 E glutamate          10.8         29           2
 F phenylalanine       3.0          8           1
 G glycine             7.4         20           1
 H histidine           8.9         24           2
 I isoleucine          5.6         15           2
 K lysine             10.0         27           2
 L leucine             3.7         10           1
 M methionine          0.7          2           1
 N asparagine          3.0          8           1
 P proline             3.7         10           1
 Q glutamine           5.2         14           1
 R arginine            5.2         14           2
 S serine              7.1         19           2
 T threonine           4.8         13           1
 V valine              3.3          9           1
 W tryptophan          0.0          0           0
 Y tyrosine            5.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 389 
ZNF192                0.599   zinc finger protein 192 
LOC344065             0.573   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.573   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.573   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF570                0.566   zinc finger protein 570 
ZNF135                0.565   zinc finger protein 135 
ZNF34                 0.561   zinc finger protein 34 
LOC647678             0.559   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.559   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.559   PREDICTED: hypothetical protein XP_002343697 
ZNF3                  0.559   zinc finger protein 3 isoform 2 
ZNF383                0.559   zinc finger protein 383 
ZNF23                 0.556   zinc finger protein 23 
ZFP2                  0.556   zinc finger protein 2 homolog 
ZNF420                0.556   zinc finger protein 420 
ZNF347                0.556   zinc finger protein 347 
ZNF79                 0.556   zinc finger protein 79 
ZNF529                0.554   zinc finger protein 529 isoform b 
ZNF529                0.554   zinc finger protein 529 isoform a 
ZNF529                0.554   zinc finger protein 529 isoform a 
ZNF167                0.554   zinc finger protein 167 isoform 1 
ZNF397                0.552   zinc finger protein 397 isoform 1 
ZFP3                  0.552   zinc finger protein-3 
ZNF345                0.552   zinc finger protein 345 
DKFZp686E2433         0.552   hypothetical protein LOC345462 
ZNF502                0.552   zinc finger protein 502 
ZNF502                0.552   zinc finger protein 502 
ZNF502                0.552   zinc finger protein 502 
ZNF502                0.552   zinc finger protein 502 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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