Guide to the Human Genome
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Name: ZNF23 Sequence: fasta or formatted (643aa) NCBI GI: 23308737
Description:

zinc finger protein 23

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         20           2
 C cysteine            6.5         42           1
 D aspartate           1.9         12           1
 E glutamate           9.5         61           2
 F phenylalanine       5.3         34           2
 G glycine             8.2         53           2
 H histidine           6.2         40           2
 I isoleucine          5.0         32           2
 K lysine              9.2         59           2
 L leucine             4.8         31           2
 M methionine          0.9          6           1
 N asparagine          4.5         29           3
 P proline             3.6         23           1
 Q glutamine           6.7         43           2
 R arginine            4.2         27           1
 S serine              8.7         56           2
 T threonine           5.3         34           1
 V valine              3.1         20           1
 W tryptophan          0.3          2           1
 Y tyrosine            3.0         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 23 
ZNF420                0.475   zinc finger protein 420 
ZNF665                0.465   zinc finger protein 665 
ZNF160                0.462   zinc finger protein 160 
ZNF160                0.462   zinc finger protein 160 
ZNF160                0.462   zinc finger protein 160 
ZNF184                0.462   zinc finger protein 184 
ZNF347                0.458   zinc finger protein 347 
ZNF546                0.456   zinc finger protein 546 
ZNF268                0.454   zinc finger protein 268 
ZNF470                0.454   zinc finger protein 470 
ZNF30                 0.449   zinc finger protein 30 isoform b 
ZNF30                 0.449   zinc finger protein 30 isoform a 
ZNF30                 0.449   zinc finger protein 30 isoform a 
ZNF780B               0.448   zinc finger protein 780B 
LOC100287429          0.448   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.448   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.448   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.448   zinc finger protein 84 
ZNF84                 0.448   zinc finger protein 84 
ZNF709                0.444   zinc finger protein 709 isoform b 
ZNF709                0.444   zinc finger protein 709 isoform a 
ZNF571                0.439   zinc finger protein 571 
ZNF658                0.439   zinc finger protein 658 
ZNF208                0.439   zinc finger protein 208 
ZNF624                0.439   zinc finger protein 624 
ZNF569                0.438   zinc finger protein 569 
ZNF135                0.435   zinc finger protein 135 
ZNF16                 0.433   zinc finger protein 16 
ZNF16                 0.433   zinc finger protein 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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