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Search of human proteins with 222831614
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222831614 hypothetical protein LOC388963 [Homo sapiens]
(588 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222831614 hypothetical protein LOC388963 [Homo sapiens] 1197 0.0
gi|33239445 eukaryotic translation initiation factor 3, subunit ... 38 0.030
gi|83367072 eukaryotic translation initiation factor 3, subunit ... 38 0.030
gi|38045906 von Hippel-Lindau tumor suppressor isoform 2 [Homo s... 34 0.43
gi|4507891 von Hippel-Lindau tumor suppressor isoform 1 [Homo sa... 34 0.43
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 34 0.43
gi|83367077 mucin 16 [Homo sapiens] 33 0.56
gi|194097448 RELT-like 2 [Homo sapiens] 33 0.56
gi|194097446 RELT-like 2 [Homo sapiens] 33 0.56
gi|110349719 titin isoform N2-A [Homo sapiens] 33 0.73
gi|110349717 titin isoform novex-2 [Homo sapiens] 33 0.73
gi|110349713 titin isoform novex-1 [Homo sapiens] 33 0.73
gi|110349715 titin isoform N2-B [Homo sapiens] 33 0.73
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 33 0.73
gi|148612879 polyhomeotic like 3 [Homo sapiens] 33 0.73
gi|151101459 SAPS domain family, member 1 [Homo sapiens] 33 0.73
gi|239735519 SET binding factor 1 [Homo sapiens] 33 0.96
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 33 0.96
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 33 0.96
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 33 0.96
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 33 0.96
gi|40548408 p30 DBC protein [Homo sapiens] 32 1.2
gi|24432106 p30 DBC protein [Homo sapiens] 32 1.2
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 32 1.2
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 32 1.6
gi|239757832 PREDICTED: hypothetical protein [Homo sapiens] 32 1.6
gi|239752343 PREDICTED: hypothetical protein [Homo sapiens] 32 1.6
gi|239746856 PREDICTED: hypothetical protein XP_002343859 [Homo ... 32 1.6
gi|239741997 PREDICTED: hypothetical protein XP_002342369 [Homo ... 32 1.6
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 32 1.6
>gi|222831614 hypothetical protein LOC388963 [Homo sapiens]
Length = 588
Score = 1197 bits (3097), Expect = 0.0
Identities = 588/588 (100%), Positives = 588/588 (100%)
Query: 1 MEMQSPIVQRQERQVRDRGVTRSKAEKVRPPTVPVPQVDIVPGRLSEAEWMALTALEEGE 60
MEMQSPIVQRQERQVRDRGVTRSKAEKVRPPTVPVPQVDIVPGRLSEAEWMALTALEEGE
Sbjct: 1 MEMQSPIVQRQERQVRDRGVTRSKAEKVRPPTVPVPQVDIVPGRLSEAEWMALTALEEGE 60
Query: 61 DVVGDILADLLARVMDSAFKVYLTQQCIPFTISQAREAMLQITEWRFLARDEGESAVAED 120
DVVGDILADLLARVMDSAFKVYLTQQCIPFTISQAREAMLQITEWRFLARDEGESAVAED
Sbjct: 61 DVVGDILADLLARVMDSAFKVYLTQQCIPFTISQAREAMLQITEWRFLARDEGESAVAED 120
Query: 121 PTWGEDEEPSACTTDSWAQGSVPVLHASTSEGLENFQGEDPGGVDRIPLGRSWMGRGSQE 180
PTWGEDEEPSACTTDSWAQGSVPVLHASTSEGLENFQGEDPGGVDRIPLGRSWMGRGSQE
Sbjct: 121 PTWGEDEEPSACTTDSWAQGSVPVLHASTSEGLENFQGEDPGGVDRIPLGRSWMGRGSQE 180
Query: 181 QMESWEPSPQLRVTSAPPPTSELFQEAGPGGPVEEADGQSRGLSSAGSLSASFQLSVEEA 240
QMESWEPSPQLRVTSAPPPTSELFQEAGPGGPVEEADGQSRGLSSAGSLSASFQLSVEEA
Sbjct: 181 QMESWEPSPQLRVTSAPPPTSELFQEAGPGGPVEEADGQSRGLSSAGSLSASFQLSVEEA 240
Query: 241 PADDADPSLDPYLVASPQASTGRGHPLGFHLSLEDLYCCMPQLDAAGDRLELRSEGVPCI 300
PADDADPSLDPYLVASPQASTGRGHPLGFHLSLEDLYCCMPQLDAAGDRLELRSEGVPCI
Sbjct: 241 PADDADPSLDPYLVASPQASTGRGHPLGFHLSLEDLYCCMPQLDAAGDRLELRSEGVPCI 300
Query: 301 ASGVLVSYPSVGGATRPSASCQQQRAGHSDVRLSAHHHRMRRKAAVKRLDPARLPCHWVR 360
ASGVLVSYPSVGGATRPSASCQQQRAGHSDVRLSAHHHRMRRKAAVKRLDPARLPCHWVR
Sbjct: 301 ASGVLVSYPSVGGATRPSASCQQQRAGHSDVRLSAHHHRMRRKAAVKRLDPARLPCHWVR 360
Query: 361 PLAEVLVPDSQTRPLEAYRGRQRGEKTKARAEPQALGPGTRVSPAAFFPLRPGIPFRDLD 420
PLAEVLVPDSQTRPLEAYRGRQRGEKTKARAEPQALGPGTRVSPAAFFPLRPGIPFRDLD
Sbjct: 361 PLAEVLVPDSQTRPLEAYRGRQRGEKTKARAEPQALGPGTRVSPAAFFPLRPGIPFRDLD 420
Query: 421 SGPALLFPTLNLGLSSPSLESKLPLPNSRIRFLTTHPVLPDVARSRSPKLWPSVRWPSGW 480
SGPALLFPTLNLGLSSPSLESKLPLPNSRIRFLTTHPVLPDVARSRSPKLWPSVRWPSGW
Sbjct: 421 SGPALLFPTLNLGLSSPSLESKLPLPNSRIRFLTTHPVLPDVARSRSPKLWPSVRWPSGW 480
Query: 481 EGKAELLGELWAGRTRVPPQGLELADREGQDPGRWPRTTPPVLEATSQVMWKPVLLPEAL 540
EGKAELLGELWAGRTRVPPQGLELADREGQDPGRWPRTTPPVLEATSQVMWKPVLLPEAL
Sbjct: 481 EGKAELLGELWAGRTRVPPQGLELADREGQDPGRWPRTTPPVLEATSQVMWKPVLLPEAL 540
Query: 541 KLAPGVSMWNRSTQVLLSSGVPEQEDKEGSTFPPVEQHPIQTGAPKPR 588
KLAPGVSMWNRSTQVLLSSGVPEQEDKEGSTFPPVEQHPIQTGAPKPR
Sbjct: 541 KLAPGVSMWNRSTQVLLSSGVPEQEDKEGSTFPPVEQHPIQTGAPKPR 588
>gi|33239445 eukaryotic translation initiation factor 3, subunit 9
eta, 116kDa [Homo sapiens]
Length = 814
Score = 37.7 bits (86), Expect = 0.030
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 183 ESWEPSPQLRVTSAPPPTSELFQEAGPGGPVEEADGQSRGLSSAGSLSASFQLSVEEAPA 242
E EP Q + + PPP L + AGPG P EA G G A + V PA
Sbjct: 15 ERAEPGQQ-QPAAEPPPAEGLLRPAGPGAP--EAAGTEASSEEVGIAEAGPESEVRTEPA 71
Query: 243 DDADPSLDPYLVASPQAS 260
+A+ + P SP A+
Sbjct: 72 AEAEAASGPSESPSPPAA 89
>gi|83367072 eukaryotic translation initiation factor 3, subunit 9
eta, 116kDa [Homo sapiens]
Length = 814
Score = 37.7 bits (86), Expect = 0.030
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 183 ESWEPSPQLRVTSAPPPTSELFQEAGPGGPVEEADGQSRGLSSAGSLSASFQLSVEEAPA 242
E EP Q + + PPP L + AGPG P EA G G A + V PA
Sbjct: 15 ERAEPGQQ-QPAAEPPPAEGLLRPAGPGAP--EAAGTEASSEEVGIAEAGPESEVRTEPA 71
Query: 243 DDADPSLDPYLVASPQAS 260
+A+ + P SP A+
Sbjct: 72 AEAEAASGPSESPSPPAA 89
>gi|38045906 von Hippel-Lindau tumor suppressor isoform 2 [Homo
sapiens]
Length = 172
Score = 33.9 bits (76), Expect = 0.43
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 135 DSWAQGSVPVLHASTSE-GLENFQGEDPGGVDRIPLGRSWMGRGSQEQMESWEPSPQLRV 193
++W + V A E G E GE+ G + P G++E+ME+ P P LR
Sbjct: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRS 65
Query: 194 TSAPPPTSELFQEAGP 209
++ P+ +F P
Sbjct: 66 VNSREPSQVIFCNRSP 81
>gi|4507891 von Hippel-Lindau tumor suppressor isoform 1 [Homo
sapiens]
Length = 213
Score = 33.9 bits (76), Expect = 0.43
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 135 DSWAQGSVPVLHASTSE-GLENFQGEDPGGVDRIPLGRSWMGRGSQEQMESWEPSPQLRV 193
++W + V A E G E GE+ G + P G++E+ME+ P P LR
Sbjct: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRS 65
Query: 194 TSAPPPTSELFQEAGP 209
++ P+ +F P
Sbjct: 66 VNSREPSQVIFCNRSP 81
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 33.9 bits (76), Expect = 0.43
Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 168 PLGRSWMGRGSQEQMESWEPSPQLRVTSAPPPTSELFQEAGPGGPVEEADGQSRGLSSA- 226
P R RGSQ + P R A P + + P P DG+ RGLS A
Sbjct: 124 PAPREEGARGSQRVL----PQAHCRPREALPAAASRPSPSSPLPPARGRDGEERGLSPAL 179
Query: 227 ---GSLSASFQLSVEEAPADDADPSL 249
GSL A + A A +ADP L
Sbjct: 180 GLRGSLRARGRGDSVPAAASEADPFL 205
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.5 bits (75), Expect = 0.56
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Query: 133 TTDSWAQGSVPVLHASTSEGLENFQGEDPGGVDRIPLGRSWMGRGSQEQMESWEPSPQLR 192
T D+ + S+ + H++ S+G + Q + R P SWM S +E PS L
Sbjct: 7921 TLDTSSTTSLTMTHSTISQGFSHSQMSTL--MRRGPEDVSWM---SPPLLEKTRPSFSLM 7975
Query: 193 ---VTSAPPPTSELFQEAGPGGPVEEADGQSRGLSSAGSLSASFQLSVEEAPADDADPSL 249
T++P P S E+ P+ + GL+ + V +PA+ + S+
Sbjct: 7976 SSPATTSPSPVSSTLPESISSSPLPVTSLLTSGLAKTTDMLHKSSEPVTNSPANLSSTSV 8035
Query: 250 DPYLVASPQASTGRGHP 266
+ + T + HP
Sbjct: 8036 EILATSEVTTDTEKTHP 8052
>gi|194097448 RELT-like 2 [Homo sapiens]
Length = 303
Score = 33.5 bits (75), Expect = 0.56
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 12/109 (11%)
Query: 158 GEDPGGVDRIPLGRSWMGRGSQEQMESWEPSPQLRVTSAPP------PTSELFQEAGPGG 211
G+DPGG G+ G + E++ P PQ V ++PP S L A G
Sbjct: 198 GQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQ--VLASPPVQNGGLRDSSLTPRALEGN 255
Query: 212 PVEEADGQSRGLSSAGSLSASFQLSVEEAPADDADPSLDPYLVASPQAS 260
P A+ R AG S L +EA + P + V+ PQ +
Sbjct: 256 PRASAEPTLR----AGGRGPSPGLPTQEANGQPSKPDTSDHQVSLPQGA 300
>gi|194097446 RELT-like 2 [Homo sapiens]
Length = 303
Score = 33.5 bits (75), Expect = 0.56
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 12/109 (11%)
Query: 158 GEDPGGVDRIPLGRSWMGRGSQEQMESWEPSPQLRVTSAPP------PTSELFQEAGPGG 211
G+DPGG G+ G + E++ P PQ V ++PP S L A G
Sbjct: 198 GQDPGGGQGSGGGQPKAGMPAMERLPPERPQPQ--VLASPPVQNGGLRDSSLTPRALEGN 255
Query: 212 PVEEADGQSRGLSSAGSLSASFQLSVEEAPADDADPSLDPYLVASPQAS 260
P A+ R AG S L +EA + P + V+ PQ +
Sbjct: 256 PRASAEPTLR----AGGRGPSPGLPTQEANGQPSKPDTSDHQVSLPQGA 300
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 33.1 bits (74), Expect = 0.73
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
Query: 26 EKVRPPTVPVPQVDIVPGRLSEAEWMALTALEEGEDVVGDILADLLARVMDSAFKVYLTQ 85
+ + PP P+P+V E EW A G ++VG + L + +
Sbjct: 14998 DPISPPGPPIPRVTDTSSTTIELEWEP-PAFNGGGEIVGYFVDKQLVGTNEWSRCTEKMI 15056
Query: 86 QCIPFTISQARE-AMLQITEWRFLARDEGESAVAEDPTWGEDEEPSACTTDSWAQGSVPV 144
+ +T+ + RE A ++ A EG + T E +EP A D +G + +
Sbjct: 15057 KVRQYTVKEIREGADYKLRVSAVNAAGEGPPGETQPVTVAEPQEPPAVELDVSVKGGIQI 15116
Query: 145 LHAST 149
+ T
Sbjct: 15117 MAGKT 15121
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 33.1 bits (74), Expect = 0.73
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
Query: 26 EKVRPPTVPVPQVDIVPGRLSEAEWMALTALEEGEDVVGDILADLLARVMDSAFKVYLTQ 85
+ + PP P+P+V E EW A G ++VG + L + +
Sbjct: 8693 DPISPPGPPIPRVTDTSSTTIELEWEP-PAFNGGGEIVGYFVDKQLVGTNEWSRCTEKMI 8751
Query: 86 QCIPFTISQARE-AMLQITEWRFLARDEGESAVAEDPTWGEDEEPSACTTDSWAQGSVPV 144
+ +T+ + RE A ++ A EG + T E +EP A D +G + +
Sbjct: 8752 KVRQYTVKEIREGADYKLRVSAVNAAGEGPPGETQPVTVAEPQEPPAVELDVSVKGGIQI 8811
Query: 145 LHAST 149
+ T
Sbjct: 8812 MAGKT 8816
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 33.1 bits (74), Expect = 0.73
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
Query: 26 EKVRPPTVPVPQVDIVPGRLSEAEWMALTALEEGEDVVGDILADLLARVMDSAFKVYLTQ 85
+ + PP P+P+V E EW A G ++VG + L + +
Sbjct: 8626 DPISPPGPPIPRVTDTSSTTIELEWEP-PAFNGGGEIVGYFVDKQLVGTNEWSRCTEKMI 8684
Query: 86 QCIPFTISQARE-AMLQITEWRFLARDEGESAVAEDPTWGEDEEPSACTTDSWAQGSVPV 144
+ +T+ + RE A ++ A EG + T E +EP A D +G + +
Sbjct: 8685 KVRQYTVKEIREGADYKLRVSAVNAAGEGPPGETQPVTVAEPQEPPAVELDVSVKGGIQI 8744
Query: 145 LHAST 149
+ T
Sbjct: 8745 MAGKT 8749
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 33.1 bits (74), Expect = 0.73
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
Query: 26 EKVRPPTVPVPQVDIVPGRLSEAEWMALTALEEGEDVVGDILADLLARVMDSAFKVYLTQ 85
+ + PP P+P+V E EW A G ++VG + L + +
Sbjct: 8501 DPISPPGPPIPRVTDTSSTTIELEWEP-PAFNGGGEIVGYFVDKQLVGTNEWSRCTEKMI 8559
Query: 86 QCIPFTISQARE-AMLQITEWRFLARDEGESAVAEDPTWGEDEEPSACTTDSWAQGSVPV 144
+ +T+ + RE A ++ A EG + T E +EP A D +G + +
Sbjct: 8560 KVRQYTVKEIREGADYKLRVSAVNAAGEGPPGETQPVTVAEPQEPPAVELDVSVKGGIQI 8619
Query: 145 LHAST 149
+ T
Sbjct: 8620 MAGKT 8624
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 33.1 bits (74), Expect = 0.73
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 19/121 (15%)
Query: 152 GLENFQGEDPGGVDRIPLG--RSWMGRGSQEQMESWEPSPQLR---VTSAPPPTSELFQE 206
GL +G+ P G R+ R+ G G++E+ P+ +AP P+S
Sbjct: 37 GLATGKGQRPPGPGRVRAAQARARRGGGARERPAEGARGPRAARGGARAAPMPSS----- 91
Query: 207 AGPGGPVEEA----DGQSRGLSSAGSLSASFQLSVEEAPADDADPSLDPYLVASPQASTG 262
P GP E A R L+ A S SA SV AP A PS P+ G
Sbjct: 92 -APRGPTEPALRRPSSAERPLAQAPSSSA----SVGRAPGAMASPSRSSEATGKPRGRDG 146
Query: 263 R 263
R
Sbjct: 147 R 147
>gi|148612879 polyhomeotic like 3 [Homo sapiens]
Length = 995
Score = 33.1 bits (74), Expect = 0.73
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 179 QEQMESWEPSPQLRVTSAPPPTSELFQEAGPGGPVEEADGQSR----------GLSSAGS 228
Q+Q + +P T PPP+ G P ++ QS+ L+ + +
Sbjct: 340 QQQQQQIQPITLQNSTQDPPPSQHCIPLQNHGLPPAPSNAQSQHCSPIQSHPSPLTVSPN 399
Query: 229 LSASFQLSVEEAPADDADPSLDPYLVASPQASTGRGHPL 267
S S Q SV +P PS P ++ PQA + HPL
Sbjct: 400 QSQSAQQSVVVSPPPPHSPSQSPTIIIHPQALI-QPHPL 437
>gi|151101459 SAPS domain family, member 1 [Homo sapiens]
Length = 881
Score = 33.1 bits (74), Expect = 0.73
Identities = 41/169 (24%), Positives = 58/169 (34%), Gaps = 41/169 (24%)
Query: 112 EGESAVAEDPTWGEDEEPSACTTDSWAQGSVPVLHASTSEGLENFQGEDPGG------VD 165
+ E ED EDEE C G+ P+ + S G P G D
Sbjct: 669 DSEDEEEEDEEEEEDEEGIGCAARG---GATPLSYPSP--------GPQPPGPSWTATFD 717
Query: 166 RIPLGRSWMGRGS-QEQMESWEPSPQ----------------------LRVTSAPPPTSE 202
+P R S +E++ + P+PQ L++ S P
Sbjct: 718 PVPTDAPTSPRVSGEEELHTGPPAPQGPLSVPQGLPTQSLASPPARDALQLRSQDPTPPS 777
Query: 203 LFQEAGPGGPVEEADGQSRGLSSAGSLSASFQLSVEEAPADDADPSLDP 251
QEA G V E + L S G L A+F + AP+ + DP
Sbjct: 778 APQEATEGSKVTEPSAPCQALVSIGDLQATFH-GIRSAPSSSDSATRDP 825
>gi|239735519 SET binding factor 1 [Homo sapiens]
Length = 1893
Score = 32.7 bits (73), Expect = 0.96
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 433 GLSSPSLESKLPLPNSRIRFLTTHPVLPDVARSRSPK-LWPSVRWPSGWEGKAELLGELW 491
G SS + S +P P +R+ L ++P+ +R +P+ W SVR G +G
Sbjct: 1266 GFSSAHMGSHVPSPRARVTTL-SNPMAASASRRTAPRGKWGSVRTSGRSSGLGTDVGSRL 1324
Query: 492 AGRTRV-PPQGLELADREGQDPG 513
AGR + PPQ A+ DPG
Sbjct: 1325 AGRDALAPPQ----ANGGPPDPG 1343
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 32.7 bits (73), Expect = 0.96
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 493 GRTRVPPQGLELADREGQDPGRWPRTTPPVLEATSQVMWKPVLLPEALKLAPGVSMWNRS 552
G + + L+L+D E D + P P ++S P LPE + A S + S
Sbjct: 418 GTSSMLEDDLQLSDSEDSDSEQTPEKPP----SSSAPPSAPQSLPEPVASAHSSSAESES 473
Query: 553 TQVLLSSGVPEQEDKEGSTFPPVEQHPIQTGAPKP 587
T S + E S+ E P++T AP+P
Sbjct: 474 TS---DSDSSSDSESESSSSDSEENEPLETPAPEP 505
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 32.7 bits (73), Expect = 0.96
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 167 IPLGRSWMGR-GSQEQMESWEPSPQLRVTSAPPPTSELFQEAGPGGPV-EEADGQSRGLS 224
I LG GR G + + E EPSP+ V PP++ + + P PV + Q+
Sbjct: 710 IDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAG 769
Query: 225 SAGSLSASFQLSV-EEAPADDADP 247
+ + S S ++V APA P
Sbjct: 770 ATATTSTSSTVTVTAPAPAATGSP 793
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 32.7 bits (73), Expect = 0.96
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 167 IPLGRSWMGR-GSQEQMESWEPSPQLRVTSAPPPTSELFQEAGPGGPV-EEADGQSRGLS 224
I LG GR G + + E EPSP+ V PP++ + + P PV + Q+
Sbjct: 735 IDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAG 794
Query: 225 SAGSLSASFQLSV-EEAPADDADP 247
+ + S S ++V APA P
Sbjct: 795 ATATTSTSSTVTVTAPAPAATGSP 818
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 32.7 bits (73), Expect = 0.96
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 167 IPLGRSWMGR-GSQEQMESWEPSPQLRVTSAPPPTSELFQEAGPGGPV-EEADGQSRGLS 224
I LG GR G + + E EPSP+ V PP++ + + P PV + Q+
Sbjct: 735 IDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAG 794
Query: 225 SAGSLSASFQLSV-EEAPADDADP 247
+ + S S ++V APA P
Sbjct: 795 ATATTSTSSTVTVTAPAPAATGSP 818
>gi|40548408 p30 DBC protein [Homo sapiens]
Length = 923
Score = 32.3 bits (72), Expect = 1.2
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 182 MESWEPSPQLRVTSAPPPTSELFQEAGPGGPVEEADGQSRGLS--SAGSLSASFQLSVEE 239
+E WE Q + A PPT E E P +A Q+ S +A + A+ Q +
Sbjct: 436 LEEWEALCQQKAAEAAPPTQEAQGETEPTEQAPDALEQAADTSRRNAETPEATTQQETDT 495
Query: 240 APADDADPSLDPYLVASP 257
+ P L+P ++A P
Sbjct: 496 DLPEAPPPPLEPAVIARP 513
>gi|24432106 p30 DBC protein [Homo sapiens]
Length = 923
Score = 32.3 bits (72), Expect = 1.2
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 182 MESWEPSPQLRVTSAPPPTSELFQEAGPGGPVEEADGQSRGLS--SAGSLSASFQLSVEE 239
+E WE Q + A PPT E E P +A Q+ S +A + A+ Q +
Sbjct: 436 LEEWEALCQQKAAEAAPPTQEAQGETEPTEQAPDALEQAADTSRRNAETPEATTQQETDT 495
Query: 240 APADDADPSLDPYLVASP 257
+ P L+P ++A P
Sbjct: 496 DLPEAPPPPLEPAVIARP 513
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 32.3 bits (72), Expect = 1.2
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 25/181 (13%)
Query: 106 RFLARDEGESAVAEDPTWGEDEEPSACTTD--------SWAQGSVPVLHASTSEGLENFQ 157
RFL + + S+ P G + ++ TD + G V + + + + +
Sbjct: 372 RFLGKMDPASSGEGRPVSGHTDTTASAKTDLTSLKNVDPMSSGKVDPVSLGKMDPMCSGK 431
Query: 158 GE--DPGGVDRIPLGRSW-MGRGSQEQMESWEPSP---QLRVTSAPPPTSELFQEAGPGG 211
E PG +R+ +G++ + G ++ + S P R TS+ E +G
Sbjct: 432 PELLSPGQAERVSVGKAGTVSPGKEDPVSSRREDPISAGSRKTSSEKVNPE---SSGKTN 488
Query: 212 PVEEADGQSRGLSSAGSLSASFQLSVEEAPADDADP--SLDPYLVASPQA---STGRGHP 266
PV G R L +AG SA + E A DP S LVAS +A ++G+ P
Sbjct: 489 PVSSGPGDPRSLGTAGPPSA---VKAEPATGGKGDPLSSEKAGLVASGKAAPTASGKAEP 545
Query: 267 L 267
L
Sbjct: 546 L 546
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 32.0 bits (71), Expect = 1.6
Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 158 GEDPGGVDRIPLGRSWMGRGSQEQMESW-EPSPQLRVTSAPPPTSELFQEAGPGGPVEEA 216
G PG D+ G SW G G+Q SW P Q S P E +A GG A
Sbjct: 1713 GARPGPADQSS-GGSWAGTGNQSSGRSWIGPGDQAVDCSKP----EFEDQACGGGSWAGA 1767
Query: 217 DGQSRGLSSAGS 228
Q+ G S AGS
Sbjct: 1768 GSQASGESWAGS 1779
>gi|239757832 PREDICTED: hypothetical protein [Homo sapiens]
Length = 503
Score = 32.0 bits (71), Expect = 1.6
Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 24/167 (14%)
Query: 96 REAMLQITEWRFLARDEGESAVAEDPTWGEDEEPSACTTDSWAQGSVPVLHASTSEGLEN 155
RE+ LQ+ ++ + V E P GE + PS S G V + +
Sbjct: 252 RESYLQVQGPLLISPPRRLTPVVERPAVGELDVPSLKKMQSMVWGKRGVRPSCS------ 305
Query: 156 FQGEDPGGVDRIPLGRSWMGRGSQEQMESWEPSPQL-----------RVTSAPPPTSELF 204
G R PL R +GR ++ +S E +P+L R+++ PP +
Sbjct: 306 ------GAAVRGPLPRGTLGRKVAQEKKSLEGAPELALRGAFPAWGQRLSAVPPDPASFP 359
Query: 205 QEAGPGGPVEEADGQSRGLSSAGSLSASFQLSVEEAPA-DDADPSLD 250
+G G + + SS G A + +A A +D DP+ D
Sbjct: 360 PVSGVGLLGKSVRPKEPKHSSPGKKPAGRKTRESQAAAREDNDPNRD 406
>gi|239752343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 518
Score = 32.0 bits (71), Expect = 1.6
Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 24/167 (14%)
Query: 96 REAMLQITEWRFLARDEGESAVAEDPTWGEDEEPSACTTDSWAQGSVPVLHASTSEGLEN 155
RE+ LQ+ ++ + V E P GE + PS S G V + +
Sbjct: 252 RESYLQVQGPLLISPPRRLTPVVERPAVGELDVPSLKKMQSMVWGKRGVRPSCS------ 305
Query: 156 FQGEDPGGVDRIPLGRSWMGRGSQEQMESWEPSPQL-----------RVTSAPPPTSELF 204
G R PL R +GR ++ +S E +P+L R+++ PP +
Sbjct: 306 ------GAAVRGPLPRGTLGRKVAQEKKSLEGAPELALRGAFPAWGQRLSAVPPDPASFP 359
Query: 205 QEAGPGGPVEEADGQSRGLSSAGSLSASFQLSVEEAPA-DDADPSLD 250
+G G + + SS G A + +A A +D DP+ D
Sbjct: 360 PVSGVGLLGKSVRPKEPKHSSPGKKPAGRKTRESQAAAREDNDPNRD 406
>gi|239746856 PREDICTED: hypothetical protein XP_002343859 [Homo
sapiens]
Length = 518
Score = 32.0 bits (71), Expect = 1.6
Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 24/167 (14%)
Query: 96 REAMLQITEWRFLARDEGESAVAEDPTWGEDEEPSACTTDSWAQGSVPVLHASTSEGLEN 155
RE+ LQ+ ++ + V E P GE + PS S G V + +
Sbjct: 252 RESYLQVQGPLLISPPRRLTPVVERPAVGELDVPSLKKMQSMVWGKRGVRPSCS------ 305
Query: 156 FQGEDPGGVDRIPLGRSWMGRGSQEQMESWEPSPQL-----------RVTSAPPPTSELF 204
G R PL R +GR ++ +S E +P+L R+++ PP +
Sbjct: 306 ------GAAVRGPLPRGTLGRKVAQEKKSLEGAPELALRGAFPAWGQRLSAVPPDPASFP 359
Query: 205 QEAGPGGPVEEADGQSRGLSSAGSLSASFQLSVEEAPA-DDADPSLD 250
+G G + + SS G A + +A A +D DP+ D
Sbjct: 360 PVSGVGLLGKSVRPKEPKHSSPGKKPAGRKTRESQAAAREDNDPNRD 406
>gi|239741997 PREDICTED: hypothetical protein XP_002342369 [Homo
sapiens]
Length = 268
Score = 32.0 bits (71), Expect = 1.6
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 169 LGRSWMGRGSQEQMESWEPSPQLRVTSAPPPTSELFQEAGPG--GPVEEADGQSRGLSSA 226
LGRSW+G ++ + + LR+ P+ + PG GPV R L++A
Sbjct: 73 LGRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVFWV--SERALATA 130
Query: 227 GS-------LSASFQLSVEEAPADDADPSLDP 251
GS +FQ S + +D PS P
Sbjct: 131 GSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSP 162
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 32.0 bits (71), Expect = 1.6
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 171 RSWMGRGSQEQMESWEPSPQLRVTSAPPPTSELFQEA--GPGGPVEEADGQSRGLSSAGS 228
+S +G +E++ P P +PP + +E GP G E + + G SA S
Sbjct: 460 QSKQSKGLEERLSP--PLPHEERAQSPPRSLATEEEPPQGPEGQPEWKEAEELGEDSAAS 517
Query: 229 LSASFQLSVEEAPADDA 245
LS L E+AP+ A
Sbjct: 518 LSLQLSLQREQAPSPPA 534
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,419,200
Number of Sequences: 37866
Number of extensions: 1508725
Number of successful extensions: 4219
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 4163
Number of HSP's gapped (non-prelim): 145
length of query: 588
length of database: 18,247,518
effective HSP length: 108
effective length of query: 480
effective length of database: 14,157,990
effective search space: 6795835200
effective search space used: 6795835200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.