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Search of human proteins with 22212943
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
(238 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens] 494 e-140
gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens] 400 e-112
gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens] 183 1e-46
gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo s... 152 2e-37
gi|33359701 ubiquitin-conjugating enzyme E2G 2 isoform 2 [Homo s... 142 3e-34
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens] 115 3e-26
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap... 115 4e-26
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens] 100 8e-22
gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo sapi... 97 9e-21
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s... 97 1e-20
gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 95 5e-20
gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 95 5e-20
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s... 95 6e-20
gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo sa... 93 2e-19
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s... 92 5e-19
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 92 5e-19
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 92 5e-19
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 92 5e-19
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 92 5e-19
gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 92 5e-19
gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 92 5e-19
gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sa... 92 5e-19
gi|35494003 ubiquitin-conjugating enzyme E2I [Homo sapiens] 91 7e-19
gi|35493996 ubiquitin-conjugating enzyme E2I [Homo sapiens] 91 7e-19
gi|35493987 ubiquitin-conjugating enzyme E2I [Homo sapiens] 91 7e-19
gi|4507785 ubiquitin-conjugating enzyme E2I [Homo sapiens] 91 7e-19
gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens] 90 1e-18
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa... 90 1e-18
gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens] 89 3e-18
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s... 87 1e-17
>gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
Length = 238
Score = 494 bits (1271), Expect = e-140
Identities = 238/238 (100%), Positives = 238/238 (100%)
Query: 1 MAQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKA 60
MAQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKA
Sbjct: 1 MAQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKA 60
Query: 61 HIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNV 120
HIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNV
Sbjct: 61 HIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNV 120
Query: 121 RTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKDG 180
RTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKDG
Sbjct: 121 RTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKDG 180
Query: 181 VKVPTTLAEYCIKTKVPSNDNSSDLLYDDLYDDDIDDEDEEEEDADCYDDDDSGNEES 238
VKVPTTLAEYCIKTKVPSNDNSSDLLYDDLYDDDIDDEDEEEEDADCYDDDDSGNEES
Sbjct: 181 VKVPTTLAEYCIKTKVPSNDNSSDLLYDDLYDDDIDDEDEEEEDADCYDDDDSGNEES 238
>gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens]
Length = 236
Score = 400 bits (1027), Expect = e-112
Identities = 193/240 (80%), Positives = 211/240 (87%), Gaps = 6/240 (2%)
Query: 1 MAQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKA 60
MA+ + SSQKAL+LELK LQEEPVEGFR+TLVDE DLYNWEVAIFGPPNT YEGGYFKA
Sbjct: 1 MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKA 60
Query: 61 HIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNV 120
+KFPIDYPYSPP FRFLTKMWHPNIYE GDVCISILHPPVDDPQSGELPSERWNPTQNV
Sbjct: 61 RLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNV 120
Query: 121 RTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKDG 180
RTILLSVISLLNEPNTFSPANVDASVM+RKW++SKGKD+EY +IIRKQV TK +AE+DG
Sbjct: 121 RTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDG 180
Query: 181 VKVPTTLAEYCIKTKVPSNDNSSDLLYDDLYDDDIDDEDEEEEDADCY--DDDDSGNEES 238
VKVPTTLAEYC+KTK P+ D SDL YDD Y+ D E EEE D+ C+ D+DDSG EES
Sbjct: 181 VKVPTTLAEYCVKTKAPAPDEGSDLFYDDYYE---DGEVEEEADS-CFGDDEDDSGTEES 236
>gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens]
Length = 170
Score = 183 bits (464), Expect = 1e-46
Identities = 89/164 (54%), Positives = 116/164 (70%), Gaps = 3/164 (1%)
Query: 6 MTSSQKALML--ELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIK 63
MT Q AL+L +L L + PVEGF L+D++DLY WEV I GPP+TLYEGG FKAH+
Sbjct: 1 MTELQSALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLT 60
Query: 64 FPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTI 123
FP DYP PP +F+T++WHPN+ +NGDVCISILH P +D E P ERW P V TI
Sbjct: 61 FPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETI 120
Query: 124 LLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRK 167
++SVIS+L +PN SPANVDA+ +R+ R+ + K ++ A +RK
Sbjct: 121 MISVISMLADPNGDSPANVDAAKEWREDRNGEFK-RKVARCVRK 163
>gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo
sapiens]
Length = 165
Score = 152 bits (385), Expect = 2e-37
Identities = 81/159 (50%), Positives = 99/159 (62%), Gaps = 7/159 (4%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K LM E K L P EG ++E + + WE I GP +T +E G F A + FP+DYP
Sbjct: 7 KRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPL 66
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
SPP RF +M+HPNIY +G VCISILH P DDP E +ERW+P Q+V ILLSV+S+
Sbjct: 67 SPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSM 126
Query: 131 LNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQV 169
L EPN S ANVDAS M WRD D+E I KQ+
Sbjct: 127 LAEPNDESGANVDASKM---WRD----DREQFYKIAKQI 158
>gi|33359701 ubiquitin-conjugating enzyme E2G 2 isoform 2 [Homo
sapiens]
Length = 137
Score = 142 bits (357), Expect = 3e-34
Identities = 72/137 (52%), Positives = 90/137 (65%), Gaps = 7/137 (5%)
Query: 33 VDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDV 92
++E + + WE I GP +T +E G F A + FP+DYP SPP RF +M+HPNIY +G V
Sbjct: 1 MNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRV 60
Query: 93 CISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWR 152
CISILH P DDP E +ERW+P Q+V ILLSV+S+L EPN S ANVDAS M WR
Sbjct: 61 CISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKM---WR 117
Query: 153 DSKGKDKEYAEIIRKQV 169
D D+E I KQ+
Sbjct: 118 D----DREQFYKIAKQI 130
>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
Length = 152
Score = 115 bits (289), Expect = 3e-26
Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 24/173 (13%)
Query: 7 TSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPI 66
T +++ LM + K LQE+P G E+++ W IFGP T +E G FK I+F
Sbjct: 3 TPARRRLMRDFKRLQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSE 61
Query: 67 DYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLS 126
+YP PPT RFL+KM+HPN+Y +G +C+ IL RW+PT +V +IL S
Sbjct: 62 EYPNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTS 108
Query: 127 VISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKD 179
+ SLL+EPN SPAN A+ ++++ +EY K+VSA ++ D
Sbjct: 109 IQSLLDEPNPNSPANSQAAQLYQE------NKREY----EKRVSAIVEQSWND 151
>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
Length = 152
Score = 115 bits (287), Expect = 4e-26
Identities = 65/173 (37%), Positives = 98/173 (56%), Gaps = 24/173 (13%)
Query: 7 TSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPI 66
T +++ LM + K LQE+P G E+++ W IFGP T +E G FK I+F
Sbjct: 3 TPARRRLMRDFKRLQEDPPAGVS-GAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTE 61
Query: 67 DYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLS 126
+YP PPT RF++KM+HPN+Y +G +C+ IL RW+PT +V +IL S
Sbjct: 62 EYPNKPPTVRFVSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTS 108
Query: 127 VISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKD 179
+ SLL+EPN SPAN A+ ++++ +EY K+VSA ++ +D
Sbjct: 109 IQSLLDEPNPNSPANSQAAQLYQE------NKREY----EKRVSAIVEQSWRD 151
>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
Length = 147
Score = 100 bits (250), Expect = 8e-22
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 14/139 (10%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K + EL LQ +P V + DL++W+ I GPP++ Y+GG F + FP DYP+
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPF 62
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F TK++HPNI NG +C+ IL +W+P V +LLS+ SL
Sbjct: 63 KPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMFR 149
L +PN P D + +++
Sbjct: 110 LCDPNPDDPLVPDIAQIYK 128
>gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo
sapiens]
Length = 179
Score = 97.4 bits (241), Expect = 9e-21
Identities = 60/162 (37%), Positives = 85/162 (52%), Gaps = 19/162 (11%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESD-LYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYP 69
K L EL +L +G I+ ESD L+ W I G T+YE +K ++FP YP
Sbjct: 33 KRLQQELMTLMMSGDKG--ISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYP 90
Query: 70 YSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVIS 129
Y+ PT +FLT +HPN+ G++C+ IL E+W+ +VRTILLS+ S
Sbjct: 91 YNAPTVKFLTPCYHPNVDTQGNICLDIL-------------KEKWSALYDVRTILLSIQS 137
Query: 130 LLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSA 171
LL EPN SP N A+ + W++ K E KQV++
Sbjct: 138 LLGEPNIDSPLNTHAAEL---WKNPTAFKKYLQETYSKQVTS 176
>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
sapiens]
Length = 149
Score = 97.1 bits (240), Expect = 1e-20
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 14/148 (9%)
Query: 6 MTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFP 65
M S++K L EL L +P V + D+++W+ I GP ++ Y+GG F I FP
Sbjct: 1 MLSNRKCLSKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFP 59
Query: 66 IDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILL 125
DYP+ PP F T+++HPNI NG +C+ IL +W+P + +LL
Sbjct: 60 TDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLL 106
Query: 126 SVISLLNEPNTFSPANVDASVMFRKWRD 153
S+ SLL +PN P + + +++ RD
Sbjct: 107 SICSLLCDPNPDDPLVPEIARIYKTDRD 134
>gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 95.1 bits (235), Expect = 5e-20
Identities = 54/143 (37%), Positives = 77/143 (53%), Gaps = 17/143 (11%)
Query: 30 ITLVDESD-LYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYE 88
I+ ESD L+ W I G T+YE +K ++FP YPY+ PT +FLT +HPN+
Sbjct: 11 ISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT 70
Query: 89 NGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMF 148
G++C+ IL E+W+ +VRTILLS+ SLL EPN SP N A+ +
Sbjct: 71 QGNICLDIL-------------KEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAEL- 116
Query: 149 RKWRDSKGKDKEYAEIIRKQVSA 171
W++ K E KQV++
Sbjct: 117 --WKNPTAFKKYLQETYSKQVTS 137
>gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 95.1 bits (235), Expect = 5e-20
Identities = 54/143 (37%), Positives = 77/143 (53%), Gaps = 17/143 (11%)
Query: 30 ITLVDESD-LYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYE 88
I+ ESD L+ W I G T+YE +K ++FP YPY+ PT +FLT +HPN+
Sbjct: 11 ISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT 70
Query: 89 NGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMF 148
G++C+ IL E+W+ +VRTILLS+ SLL EPN SP N A+ +
Sbjct: 71 QGNICLDIL-------------KEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAEL- 116
Query: 149 RKWRDSKGKDKEYAEIIRKQVSA 171
W++ K E KQV++
Sbjct: 117 --WKNPTAFKKYLQETYSKQVTS 137
>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
sapiens]
Length = 147
Score = 94.7 bits (234), Expect = 6e-20
Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 14/129 (10%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K + EL LQ +P V + DL++W+ I GP ++ Y+GG F I FP DYP+
Sbjct: 4 KRIQKELTDLQRDPPAQCSAGPVGD-DLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F TK++HPNI NG +C+ IL +W+P V +LLS+ SL
Sbjct: 63 KPPKVAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSL 109
Query: 131 LNEPNTFSP 139
L +PN P
Sbjct: 110 LCDPNPDDP 118
>gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo
sapiens]
Length = 154
Score = 93.2 bits (230), Expect = 2e-19
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Query: 8 SSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPID 67
++ + LM EL+ +++ ++ FR VDE++L W+ I P N Y+ G F+ I FP +
Sbjct: 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAE 60
Query: 68 YPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSV 127
YP+ PP F TK++HPNI E G VC+ + + +E W P ++ S+
Sbjct: 61 YPFKPPKITFKTKIYHPNIDEKGQVCLPV------------ISAENWKPATKTDQVIQSL 108
Query: 128 ISLLNEPNTFSPANVDASVMFRKWRDSKGKDKE 160
I+L+N+P P D + + K R K+ E
Sbjct: 109 IALVNDPQPEHPLRADLAEEYSKDRKKFCKNAE 141
>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
sapiens]
Length = 148
Score = 91.7 bits (226), Expect = 5e-19
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F I FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI NG +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMFRKWRD 153
L +PN P + + +++ RD
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRD 132
>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 91.7 bits (226), Expect = 5e-19
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F I FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI NG +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMFRKWRD 153
L +PN P + + +++ RD
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRD 132
>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 91.7 bits (226), Expect = 5e-19
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F I FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI NG +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMFRKWRD 153
L +PN P + + +++ RD
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRD 132
>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 91.7 bits (226), Expect = 5e-19
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F I FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI NG +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMFRKWRD 153
L +PN P + + +++ RD
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRD 132
>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 91.7 bits (226), Expect = 5e-19
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F I FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI NG +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMFRKWRD 153
L +PN P + + +++ RD
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRD 132
>gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 91.7 bits (226), Expect = 5e-19
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F I FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI NG +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMFRKWRD 153
L +PN P + + +++ RD
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRD 132
>gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 91.7 bits (226), Expect = 5e-19
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F I FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI NG +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMFRKWRD 153
L +PN P + + +++ RD
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRD 132
>gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 91.7 bits (226), Expect = 5e-19
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F I FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI NG +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMFRKWRD 153
L +PN P + + +++ RD
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRD 132
>gi|35494003 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 91.3 bits (225), Expect = 7e-19
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 37 DLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISI 96
+L NWE AI G T +EGG FK + F DYP SPP +F ++HPN+Y +G VC+SI
Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSI 96
Query: 97 LHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKG 156
L D W P ++ ILL + LLNEPN PA +A ++ + R
Sbjct: 97 LEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNR---- 141
Query: 157 KDKEYAEIIRKQ 168
EY + +R Q
Sbjct: 142 --VEYEKRVRAQ 151
>gi|35493996 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 91.3 bits (225), Expect = 7e-19
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 37 DLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISI 96
+L NWE AI G T +EGG FK + F DYP SPP +F ++HPN+Y +G VC+SI
Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSI 96
Query: 97 LHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKG 156
L D W P ++ ILL + LLNEPN PA +A ++ + R
Sbjct: 97 LEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNR---- 141
Query: 157 KDKEYAEIIRKQ 168
EY + +R Q
Sbjct: 142 --VEYEKRVRAQ 151
>gi|35493987 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 91.3 bits (225), Expect = 7e-19
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 37 DLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISI 96
+L NWE AI G T +EGG FK + F DYP SPP +F ++HPN+Y +G VC+SI
Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSI 96
Query: 97 LHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKG 156
L D W P ++ ILL + LLNEPN PA +A ++ + R
Sbjct: 97 LEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNR---- 141
Query: 157 KDKEYAEIIRKQ 168
EY + +R Q
Sbjct: 142 --VEYEKRVRAQ 151
>gi|4507785 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 91.3 bits (225), Expect = 7e-19
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 37 DLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISI 96
+L NWE AI G T +EGG FK + F DYP SPP +F ++HPN+Y +G VC+SI
Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSI 96
Query: 97 LHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKG 156
L D W P ++ ILL + LLNEPN PA +A ++ + R
Sbjct: 97 LEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNR---- 141
Query: 157 KDKEYAEIIRKQ 168
EY + +R Q
Sbjct: 142 --VEYEKRVRAQ 151
>gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]
Length = 152
Score = 90.1 bits (222), Expect = 1e-18
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 17/157 (10%)
Query: 6 MTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFP 65
M + ++ E + L EPV G + DES+ + V I GP ++ +EGG FK + P
Sbjct: 1 MAGLPRRIIKETQRLLAEPVPGIKAE-PDESNARYFHVVIAGPQDSPFEGGTFKLELFLP 59
Query: 66 IDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILL 125
+YP + P RF+TK++HPN+ + G +C+ IL ++W+P +RT+LL
Sbjct: 60 EEYPMAAPKVRFMTKIYHPNVDKLGRICLDIL-------------KDKWSPALQIRTVLL 106
Query: 126 SVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYA 162
S+ +LL+ PN P D + +W+ ++ + E A
Sbjct: 107 SIQALLSAPNPDDPLANDVA---EQWKTNEAQAIETA 140
>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
sapiens]
Length = 147
Score = 90.1 bits (222), Expect = 1e-18
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F I FP DYP+
Sbjct: 4 KRIHKELNDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI NG +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMFRKWRD 153
L +PN P + + +++ R+
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRE 132
>gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]
Length = 197
Score = 89.0 bits (219), Expect = 3e-18
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 13 LMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSP 72
L EL L EP G D+ + + I G NT YE G FK + P YP+ P
Sbjct: 7 LKRELHMLATEPPPGITCWQ-DKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEP 65
Query: 73 PTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLN 132
P RFLT ++HPNI G +C+ +L P P W P+ N+ T+L S+ L++
Sbjct: 66 PQIRFLTPIYHPNIDSAGRICLDVLKLP---------PKGAWRPSLNIATVLTSIQLLMS 116
Query: 133 EPNTFSPANVDASVMF-----------RKWRDSKGKDKEYAE 163
EPN P D S F R+W + + K+ A+
Sbjct: 117 EPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQKQKAD 158
>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
sapiens]
Length = 118
Score = 87.0 bits (214), Expect = 1e-17
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 13/116 (11%)
Query: 38 LYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISIL 97
+++W+ I GP ++ Y+GG F I FP DYP+ PP F T+++HPNI NG +C+ IL
Sbjct: 1 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL 60
Query: 98 HPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRD 153
+W+P + +LLS+ SLL +PN P + + +++ R+
Sbjct: 61 R-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRE 103
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,298,548
Number of Sequences: 37866
Number of extensions: 506275
Number of successful extensions: 5088
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 2951
Number of HSP's gapped (non-prelim): 1306
length of query: 238
length of database: 18,247,518
effective HSP length: 99
effective length of query: 139
effective length of database: 14,498,784
effective search space: 2015330976
effective search space used: 2015330976
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.