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Search of human proteins with 22209009
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22209009 protein kinase CHK2 isoform b [Homo sapiens]
(514 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22209009 protein kinase CHK2 isoform b [Homo sapiens] 1033 0.0
gi|6005850 protein kinase CHK2 isoform a [Homo sapiens] 1018 0.0
gi|54112407 protein kinase CHK2 isoform c [Homo sapiens] 997 0.0
gi|4502553 calcium/calmodulin-dependent protein kinase I [Homo s... 167 2e-41
gi|14196445 calcium/calmodulin-dependent protein kinase IG [Homo... 166 6e-41
gi|9966875 calcium/calmodulin-dependent protein kinase ID isofor... 163 4e-40
gi|23943850 calcium/calmodulin-dependent protein kinase ID isofo... 163 4e-40
gi|4502557 calcium/calmodulin-dependent protein kinase IV [Homo ... 152 5e-37
gi|5031689 protein kinase D3 [Homo sapiens] 149 5e-36
gi|115529463 protein kinase D1 [Homo sapiens] 149 8e-36
gi|209364621 pregnancy upregulated non-ubiquitously expressed Ca... 145 1e-34
gi|209364619 pregnancy upregulated non-ubiquitously expressed Ca... 145 1e-34
gi|156713430 doublecortin-like kinase 2 isoform b [Homo sapiens] 144 1e-34
gi|156713428 doublecortin-like kinase 2 isoform a [Homo sapiens] 144 1e-34
gi|120659787 protein kinase D2 isoform B [Homo sapiens] 144 3e-34
gi|120659785 protein kinase D2 isoform A [Homo sapiens] 144 3e-34
gi|120659782 protein kinase D2 isoform A [Homo sapiens] 144 3e-34
gi|19923468 protein kinase D2 isoform A [Homo sapiens] 144 3e-34
gi|4758128 doublecortin-like kinase 1 [Homo sapiens] 139 5e-33
gi|5453882 phosphorylase kinase gamma subunit 1 [Homo sapiens] 137 3e-32
gi|212549756 calcium/calmodulin-dependent protein kinase II delt... 135 1e-31
gi|26667183 calcium/calmodulin-dependent protein kinase II delta... 135 1e-31
gi|212549753 calcium/calmodulin-dependent protein kinase II delt... 135 1e-31
gi|26667186 calcium/calmodulin-dependent protein kinase II delta... 135 1e-31
gi|26667189 calcium/calmodulin-dependent protein kinase II delta... 135 1e-31
gi|26667180 calcium/calmodulin-dependent protein kinase II delta... 135 1e-31
gi|26667199 calcium/calmodulin-dependent protein kinase II gamma... 133 4e-31
gi|26667191 calcium/calmodulin-dependent protein kinase II gamma... 133 4e-31
gi|26667211 calcium/calmodulin-dependent protein kinase II gamma... 133 4e-31
gi|26667203 calcium/calmodulin-dependent protein kinase II gamma... 133 4e-31
>gi|22209009 protein kinase CHK2 isoform b [Homo sapiens]
Length = 514
Score = 1033 bits (2671), Expect = 0.0
Identities = 514/514 (100%), Positives = 514/514 (100%)
Query: 1 MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL 60
MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL
Sbjct: 1 MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL 60
Query: 61 SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLECVNDNYWFGRDKS 120
SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLECVNDNYWFGRDKS
Sbjct: 61 SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLECVNDNYWFGRDKS 120
Query: 121 CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKR 180
CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKR
Sbjct: 121 CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKR 180
Query: 181 RPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFER 240
RPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFER
Sbjct: 181 RPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFER 240
Query: 241 KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIV 300
KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIV
Sbjct: 241 KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIV 300
Query: 301 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQITDFGHSKILGETSLMRTLCGTPT 360
LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQITDFGHSKILGETSLMRTLCGTPT
Sbjct: 301 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQITDFGHSKILGETSLMRTLCGTPT 360
Query: 361 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 420
YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP
Sbjct: 361 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 420
Query: 421 EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALP 480
EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALP
Sbjct: 421 EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALP 480
Query: 481 QVLAQPSTSRKRPREGEAEGAETTKRPAVCAAVL 514
QVLAQPSTSRKRPREGEAEGAETTKRPAVCAAVL
Sbjct: 481 QVLAQPSTSRKRPREGEAEGAETTKRPAVCAAVL 514
>gi|6005850 protein kinase CHK2 isoform a [Homo sapiens]
Length = 543
Score = 1018 bits (2631), Expect = 0.0
Identities = 514/543 (94%), Positives = 514/543 (94%), Gaps = 29/543 (5%)
Query: 1 MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL 60
MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL
Sbjct: 1 MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL 60
Query: 61 SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLECVNDNYWFGRDKS 120
SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLECVNDNYWFGRDKS
Sbjct: 61 SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLECVNDNYWFGRDKS 120
Query: 121 CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKR 180
CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKR
Sbjct: 121 CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKR 180
Query: 181 RPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFER 240
RPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFER
Sbjct: 181 RPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFER 240
Query: 241 KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIV 300
KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIV
Sbjct: 241 KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIV 300
Query: 301 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ------------------------ 336
LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ
Sbjct: 301 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 360
Query: 337 -----ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 391
ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC
Sbjct: 361 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 420
Query: 392 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 451
LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA
Sbjct: 421 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 480
Query: 452 LRHPWLQDEDMKRKFQDLLSEENESTALPQVLAQPSTSRKRPREGEAEGAETTKRPAVCA 511
LRHPWLQDEDMKRKFQDLLSEENESTALPQVLAQPSTSRKRPREGEAEGAETTKRPAVCA
Sbjct: 481 LRHPWLQDEDMKRKFQDLLSEENESTALPQVLAQPSTSRKRPREGEAEGAETTKRPAVCA 540
Query: 512 AVL 514
AVL
Sbjct: 541 AVL 543
>gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]
Length = 586
Score = 997 bits (2577), Expect = 0.0
Identities = 514/586 (87%), Positives = 514/586 (87%), Gaps = 72/586 (12%)
Query: 1 MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL 60
MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL
Sbjct: 1 MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL 60
Query: 61 SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLE------------- 107
SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLE
Sbjct: 61 SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLETESGHVTQSDLEL 120
Query: 108 ------------------------------CVNDNYWFGRDKSCEYCFDEPLLKRTDKYR 137
CVNDNYWFGRDKSCEYCFDEPLLKRTDKYR
Sbjct: 121 LLSSDPPASASQSAGIRGVRHHPRPVCSLKCVNDNYWFGRDKSCEYCFDEPLLKRTDKYR 180
Query: 138 TYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKRRPLNNNSEIALSLSRNK 197
TYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKRRPLNNNSEIALSLSRNK
Sbjct: 181 TYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKRRPLNNNSEIALSLSRNK 240
Query: 198 VFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFA 257
VFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFA
Sbjct: 241 VFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFA 300
Query: 258 IGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK 317
IGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK
Sbjct: 301 IGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK 360
Query: 318 RLKEATCKLYFYQMLLAVQ-----------------------------ITDFGHSKILGE 348
RLKEATCKLYFYQMLLAVQ ITDFGHSKILGE
Sbjct: 361 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 420
Query: 349 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 408
TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK
Sbjct: 421 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 480
Query: 409 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 468
DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD
Sbjct: 481 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 540
Query: 469 LLSEENESTALPQVLAQPSTSRKRPREGEAEGAETTKRPAVCAAVL 514
LLSEENESTALPQVLAQPSTSRKRPREGEAEGAETTKRPAVCAAVL
Sbjct: 541 LLSEENESTALPQVLAQPSTSRKRPREGEAEGAETTKRPAVCAAVL 586
>gi|4502553 calcium/calmodulin-dependent protein kinase I [Homo
sapiens]
Length = 370
Score = 167 bits (423), Expect = 2e-41
Identities = 101/289 (34%), Positives = 155/289 (53%), Gaps = 42/289 (14%)
Query: 216 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 275
+RD Y LG+GA EV LA +++T K VAIK I+K +E ++E EI
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL---EGKEG----SMENEIA 68
Query: 276 ILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 334
+L K+ HP I+ + + +++ + Y++++L+ GGELFD++V E +Q+L A
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 335 VQ-----------------------------ITDFGHSKILGETSLMRTLCGTPTYLAPE 365
V+ I+DFG SK+ S++ T CGTP Y+APE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 366 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 425
VL Y++AVDCWS+GVI +I L GYPPF + L +QI +Y F W +
Sbjct: 189 VLAQ---KPYSKAVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQILKAEYEFDSPYWDD 244
Query: 426 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ-DEDMKRKFQDLLSEE 473
+S+ A D ++ L+ DP+ RFT E+AL+HPW+ D + + +SE+
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQ 293
>gi|14196445 calcium/calmodulin-dependent protein kinase IG [Homo
sapiens]
Length = 476
Score = 166 bits (419), Expect = 6e-41
Identities = 108/284 (38%), Positives = 150/284 (52%), Gaps = 46/284 (16%)
Query: 207 DDQSVYPKA---LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE 263
DD S + K +R +I + LGSGA EV L +R T K A+K I K S
Sbjct: 7 DDCSSWKKQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK------SPAF 60
Query: 264 ADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEA 322
D +L E EI +LKK+ H I+ +++ +++ YY+V++L+ GGELFD+++ E
Sbjct: 61 RDSSL--ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK 118
Query: 323 TCKLYFYQMLLAVQ-----------------------------ITDFGHSKILGETSLMR 353
L Q+L AV+ ITDFG SK + + +M
Sbjct: 119 DASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMS 177
Query: 354 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 413
T CGTP Y+APEVL Y++AVDCWS+GVI +I L GYPPF E T+ L ++I
Sbjct: 178 TACGTPGYVAPEVLAQ---KPYSKAVDCWSIGVITYILLCGYPPFYEE-TESKLFEKIKE 233
Query: 414 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 457
G Y F W ++SE A D + LL DP R+T E+AL HPW+
Sbjct: 234 GYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 277
>gi|9966875 calcium/calmodulin-dependent protein kinase ID isoform 1
[Homo sapiens]
Length = 357
Score = 163 bits (412), Expect = 4e-40
Identities = 96/272 (35%), Positives = 146/272 (53%), Gaps = 41/272 (15%)
Query: 224 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 283
+TLG+GA EV LA E+ T K A+K I K+ +E+ ++E EI +L+K+ H
Sbjct: 27 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL---KGKES----SIENEIAVLRKIKHE 79
Query: 284 CIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV------- 335
I+ +++ +++ ++ Y+V++L+ GGELFD++V E Q+L AV
Sbjct: 80 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 139
Query: 336 ----------------------QITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 373
I+DFG SK+ G+ +M T CGTP Y+APEVL
Sbjct: 140 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQ---K 196
Query: 374 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL 433
Y++AVDCWS+GVI +I L GYPPF + L +QI +Y F W ++S+ A D
Sbjct: 197 PYSKAVDCWSIGVIAYILLCGYPPFYDENDS-KLFEQILKAEYEFDSPYWDDISDSAKDF 255
Query: 434 VKKLLVVDPKARFTTEEALRHPWLQDEDMKRK 465
++ L+ DP R+T E+A RHPW+ + K
Sbjct: 256 IRNLMEKDPNKRYTCEQAARHPWIAGDTALNK 287
>gi|23943850 calcium/calmodulin-dependent protein kinase ID isoform
2 [Homo sapiens]
Length = 385
Score = 163 bits (412), Expect = 4e-40
Identities = 96/272 (35%), Positives = 146/272 (53%), Gaps = 41/272 (15%)
Query: 224 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 283
+TLG+GA EV LA E+ T K A+K I K+ +E+ ++E EI +L+K+ H
Sbjct: 27 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL---KGKES----SIENEIAVLRKIKHE 79
Query: 284 CIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV------- 335
I+ +++ +++ ++ Y+V++L+ GGELFD++V E Q+L AV
Sbjct: 80 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 139
Query: 336 ----------------------QITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 373
I+DFG SK+ G+ +M T CGTP Y+APEVL
Sbjct: 140 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQ---K 196
Query: 374 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL 433
Y++AVDCWS+GVI +I L GYPPF + L +QI +Y F W ++S+ A D
Sbjct: 197 PYSKAVDCWSIGVIAYILLCGYPPFYDENDS-KLFEQILKAEYEFDSPYWDDISDSAKDF 255
Query: 434 VKKLLVVDPKARFTTEEALRHPWLQDEDMKRK 465
++ L+ DP R+T E+A RHPW+ + K
Sbjct: 256 IRNLMEKDPNKRYTCEQAARHPWIAGDTALNK 287
>gi|4502557 calcium/calmodulin-dependent protein kinase IV [Homo
sapiens]
Length = 473
Score = 152 bits (385), Expect = 5e-37
Identities = 108/330 (32%), Positives = 156/330 (47%), Gaps = 51/330 (15%)
Query: 215 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
AL D + + LG GA V ++ T K A+K++ K D + V TEI
Sbjct: 41 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT---------VDKKI-VRTEI 90
Query: 275 EILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 333
+L +L+HP IIK+K F+ + +VLEL+ GGELFD++V E Q+L
Sbjct: 91 GVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILE 150
Query: 334 AV-----------------------------QITDFGHSKILGETSLMRTLCGTPTYLAP 364
AV +I DFG SKI+ LM+T+CGTP Y AP
Sbjct: 151 AVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAP 210
Query: 365 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 424
E+L Y VD WS+G+I +I L G+ PF + R + +I + +Y FI W
Sbjct: 211 EILRG---CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWD 267
Query: 425 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD--------EDMKRKFQDLLSEENES 476
EVS A DLV+KL+V+DPK R TT +AL+HPW+ + ++K Q+ +
Sbjct: 268 EVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNARRKLK 327
Query: 477 TALPQVLAQPSTSRKRPREGEAEGAETTKR 506
A+ V+A G + + R
Sbjct: 328 AAVKAVVASSRLGSASSSHGSIQESHKASR 357
>gi|5031689 protein kinase D3 [Homo sapiens]
Length = 890
Score = 149 bits (377), Expect = 5e-36
Identities = 96/286 (33%), Positives = 152/286 (53%), Gaps = 51/286 (17%)
Query: 206 VDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD 265
VD +VY + + LGSG G V RKT + VAIK+I K +F +
Sbjct: 568 VDISTVY------QIFADEVLGSGQFGIVYGGKHRKTGRDVAIKVIDKMRFPTKQESQ-- 619
Query: 266 PALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNK--RLKEA 322
+ E+ IL+ L+HP I+ ++ F+ E ++V+E + G ++ + ++ ++ RL E
Sbjct: 620 ----LRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-DMLEMILSSEKSRLPER 674
Query: 323 TCKLYFYQMLLA-----------------------------VQITDFGHSKILGETSLMR 353
K Q+L+A V++ DFG ++I+GE S R
Sbjct: 675 ITKFMVTQILVALRNLHFKNIVHCDLKPENVLLASAEPFPQVKLCDFGFARIIGEKSFRR 734
Query: 354 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 413
++ GTP YLAPEVL S GYNR++D WS+GVI+++ LSG PF+E + DQI +
Sbjct: 735 SVVGTPAYLAPEVLRS---KGYNRSLDMWSVGVIIYVSLSGTFPFNEDE---DINDQIQN 788
Query: 414 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 459
+ + P W E+S +A+DL+ LL V + R++ +++L HPWLQD
Sbjct: 789 AAFMYPPNPWREISGEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 834
>gi|115529463 protein kinase D1 [Homo sapiens]
Length = 912
Score = 149 bits (375), Expect = 8e-36
Identities = 101/317 (31%), Positives = 165/317 (52%), Gaps = 57/317 (17%)
Query: 175 VGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEV 234
VG G L+ + +++S+S ++ VD +VY + + LGSG G V
Sbjct: 550 VGTGTN--LHRDISVSISVSNCQI----QENVDISTVY------QIFPDEVLGSGQFGIV 597
Query: 235 KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 294
RKT + VAIKII K +F + + E+ IL+ L+HP ++ ++ F+
Sbjct: 598 YGGKHRKTGRDVAIKIIDKLRFPTKQESQ------LRNEVAILQNLHHPGVVNLECMFET 651
Query: 295 -EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLA----------------- 334
E ++V+E + G ++ + ++ ++ RL E K Q+L+A
Sbjct: 652 PERVFVVMEKLHG-DMLEMILSSEKGRLPEHITKFLITQILVALRHLHFKNIVHCDLKPE 710
Query: 335 ------------VQITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 382
V++ DFG ++I+GE S R++ GTP YLAPEVL + GYNR++D W
Sbjct: 711 NVLLASADPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRN---KGYNRSLDMW 767
Query: 383 SLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP 442
S+GVI+++ LSG PF+E + DQI + + + P W E+S +A+DL+ LL V
Sbjct: 768 SVGVIIYVSLSGTFPFNEDE---DIHDQIQNAAFMYPPNPWKEISHEAIDLINNLLQVKM 824
Query: 443 KARFTTEEALRHPWLQD 459
+ R++ ++ L HPWLQD
Sbjct: 825 RKRYSVDKTLSHPWLQD 841
>gi|209364621 pregnancy upregulated non-ubiquitously expressed CaM
kinase isoform b [Homo sapiens]
Length = 360
Score = 145 bits (365), Expect = 1e-34
Identities = 96/271 (35%), Positives = 141/271 (52%), Gaps = 42/271 (15%)
Query: 220 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 279
Y + + LGSGA EV LA ER + VA+K I K+ A AL VE EI +L++
Sbjct: 32 YEIRERLGSGAFSEVVLAQERGSAHLVALKCIPKK------ALRGKEAL-VENEIAVLRR 84
Query: 280 LNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV--- 335
++HP I+ +++ ++ + Y+ +EL+ GGELFD+++ E Q+L AV
Sbjct: 85 ISHPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYL 144
Query: 336 --------------------------QITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 369
++DFG SKI +++ T CGTP Y+APE+L
Sbjct: 145 HSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLSKIQA-GNMLGTACGTPGYVAPELLEQ 203
Query: 370 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 429
Y +AVD W+LGVI +I L GYPPF + + L QI Y F W ++SE
Sbjct: 204 ---KPYGKAVDVWALGVISYILLCGYPPFYD-ESDPELFSQILRASYEFDSPFWDDISES 259
Query: 430 ALDLVKKLLVVDPKARFTTEEALRHPWLQDE 460
A D ++ LL DP+ RFT ++ALRH W+ +
Sbjct: 260 AKDFIRHLLERDPQKRFTCQQALRHLWISGD 290
>gi|209364619 pregnancy upregulated non-ubiquitously expressed CaM
kinase isoform a [Homo sapiens]
Length = 426
Score = 145 bits (365), Expect = 1e-34
Identities = 96/271 (35%), Positives = 141/271 (52%), Gaps = 42/271 (15%)
Query: 220 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 279
Y + + LGSGA EV LA ER + VA+K I K+ A AL VE EI +L++
Sbjct: 98 YEIRERLGSGAFSEVVLAQERGSAHLVALKCIPKK------ALRGKEAL-VENEIAVLRR 150
Query: 280 LNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV--- 335
++HP I+ +++ ++ + Y+ +EL+ GGELFD+++ E Q+L AV
Sbjct: 151 ISHPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYL 210
Query: 336 --------------------------QITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 369
++DFG SKI +++ T CGTP Y+APE+L
Sbjct: 211 HSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLSKIQA-GNMLGTACGTPGYVAPELLEQ 269
Query: 370 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 429
Y +AVD W+LGVI +I L GYPPF + + L QI Y F W ++SE
Sbjct: 270 ---KPYGKAVDVWALGVISYILLCGYPPFYD-ESDPELFSQILRASYEFDSPFWDDISES 325
Query: 430 ALDLVKKLLVVDPKARFTTEEALRHPWLQDE 460
A D ++ LL DP+ RFT ++ALRH W+ +
Sbjct: 326 AKDFIRHLLERDPQKRFTCQQALRHLWISGD 356
>gi|156713430 doublecortin-like kinase 2 isoform b [Homo sapiens]
Length = 765
Score = 144 bits (364), Expect = 1e-34
Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 53/319 (16%)
Query: 216 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 275
L ++Y + K +G G VK +R T K+ A+KII K K G +E E+
Sbjct: 389 LLEKYKIGKVIGDGNFAVVKECIDRSTGKEFALKIIDKAK-CCGKEHL------IENEVS 441
Query: 276 ILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM--- 331
IL+++ HP II ++ A + ++V+EL++GG+LFD + + + E Y +
Sbjct: 442 ILRRVKHPNIIMLVEEMETATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANA 501
Query: 332 ------------------LLAVQITDFGHSKILGETSL-------MRTLCGTPTYLAPEV 366
LL + D S LG+ L + T+CGTPTY+APE+
Sbjct: 502 LRYLHGLSIVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVVEGPLYTVCGTPTYVAPEI 561
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKYNFIPEVWAE 425
+ G Y VD W+ GVI +I L G+PPF SE+ Q L DQI +GK F W
Sbjct: 562 IAETG---YGLKVDIWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDN 618
Query: 426 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE-------------DMKRKFQDLLSE 472
+++ A +L+ ++L V+ +AR T + L HPW+ D+ +K+ F + L +
Sbjct: 619 ITDSAKELISQMLQVNVEARCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPK 678
Query: 473 ENESTALPQVLAQPSTSRK 491
+N +T V+ + ++
Sbjct: 679 QNSTTTGVSVIMNTALDKE 697
>gi|156713428 doublecortin-like kinase 2 isoform a [Homo sapiens]
Length = 766
Score = 144 bits (364), Expect = 1e-34
Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 53/319 (16%)
Query: 216 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 275
L ++Y + K +G G VK +R T K+ A+KII K K G +E E+
Sbjct: 390 LLEKYKIGKVIGDGNFAVVKECIDRSTGKEFALKIIDKAK-CCGKEHL------IENEVS 442
Query: 276 ILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM--- 331
IL+++ HP II ++ A + ++V+EL++GG+LFD + + + E Y +
Sbjct: 443 ILRRVKHPNIIMLVEEMETATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANA 502
Query: 332 ------------------LLAVQITDFGHSKILGETSL-------MRTLCGTPTYLAPEV 366
LL + D S LG+ L + T+CGTPTY+APE+
Sbjct: 503 LRYLHGLSIVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVVEGPLYTVCGTPTYVAPEI 562
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKYNFIPEVWAE 425
+ G Y VD W+ GVI +I L G+PPF SE+ Q L DQI +GK F W
Sbjct: 563 IAETG---YGLKVDIWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDN 619
Query: 426 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE-------------DMKRKFQDLLSE 472
+++ A +L+ ++L V+ +AR T + L HPW+ D+ +K+ F + L +
Sbjct: 620 ITDSAKELISQMLQVNVEARCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPK 679
Query: 473 ENESTALPQVLAQPSTSRK 491
+N +T V+ + ++
Sbjct: 680 QNSTTTGVSVIMNTALDKE 698
>gi|120659787 protein kinase D2 isoform B [Homo sapiens]
Length = 721
Score = 144 bits (362), Expect = 3e-34
Identities = 93/308 (30%), Positives = 161/308 (52%), Gaps = 55/308 (17%)
Query: 184 NNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTC 243
+ + +++S+S +++ VD +VY + + LGSG G V RKT
Sbjct: 368 HRQASLSISVSNSQI----QENVDIATVY------QIFPDEVLGSGQFGVVYGGKHRKTG 417
Query: 244 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLE 302
+ VA+K+I K +F + + E+ IL+ L HP I+ ++ F+ E ++V+E
Sbjct: 418 RDVAVKVIDKLRFPTKQESQ------LRNEVAILQSLRHPGIVNLECMFETPEKVFVVME 471
Query: 303 LMEGGELFDKVVGNK--RLKEATCKLYFYQMLLA-------------------------- 334
+ G ++ + ++ ++ RL E K Q+L+A
Sbjct: 472 KLHG-DMLEMILSSEKGRLPERLTKFLITQILVALRHLHFKNIVHCDLKPENVLLASADP 530
Query: 335 ---VQITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 391
V++ DFG ++I+GE S R++ GTP YLAPEVL++ GYNR++D WS+GVI+++
Sbjct: 531 FPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLLN---QGYNRSLDMWSVGVIMYVS 587
Query: 392 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 451
LSG PF+E + DQI + + + W+ +S A+DL+ LL V + R++ +++
Sbjct: 588 LSGTFPFNEDE---DINDQIQNAAFMYPASPWSHISAGAIDLINNLLQVKMRKRYSVDKS 644
Query: 452 LRHPWLQD 459
L HPWLQ+
Sbjct: 645 LSHPWLQE 652
>gi|120659785 protein kinase D2 isoform A [Homo sapiens]
Length = 878
Score = 144 bits (362), Expect = 3e-34
Identities = 93/308 (30%), Positives = 161/308 (52%), Gaps = 55/308 (17%)
Query: 184 NNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTC 243
+ + +++S+S +++ VD +VY + + LGSG G V RKT
Sbjct: 525 HRQASLSISVSNSQI----QENVDIATVY------QIFPDEVLGSGQFGVVYGGKHRKTG 574
Query: 244 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLE 302
+ VA+K+I K +F + + E+ IL+ L HP I+ ++ F+ E ++V+E
Sbjct: 575 RDVAVKVIDKLRFPTKQESQ------LRNEVAILQSLRHPGIVNLECMFETPEKVFVVME 628
Query: 303 LMEGGELFDKVVGNK--RLKEATCKLYFYQMLLA-------------------------- 334
+ G ++ + ++ ++ RL E K Q+L+A
Sbjct: 629 KLHG-DMLEMILSSEKGRLPERLTKFLITQILVALRHLHFKNIVHCDLKPENVLLASADP 687
Query: 335 ---VQITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 391
V++ DFG ++I+GE S R++ GTP YLAPEVL++ GYNR++D WS+GVI+++
Sbjct: 688 FPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLLN---QGYNRSLDMWSVGVIMYVS 744
Query: 392 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 451
LSG PF+E + DQI + + + W+ +S A+DL+ LL V + R++ +++
Sbjct: 745 LSGTFPFNEDE---DINDQIQNAAFMYPASPWSHISAGAIDLINNLLQVKMRKRYSVDKS 801
Query: 452 LRHPWLQD 459
L HPWLQ+
Sbjct: 802 LSHPWLQE 809
>gi|120659782 protein kinase D2 isoform A [Homo sapiens]
Length = 878
Score = 144 bits (362), Expect = 3e-34
Identities = 93/308 (30%), Positives = 161/308 (52%), Gaps = 55/308 (17%)
Query: 184 NNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTC 243
+ + +++S+S +++ VD +VY + + LGSG G V RKT
Sbjct: 525 HRQASLSISVSNSQI----QENVDIATVY------QIFPDEVLGSGQFGVVYGGKHRKTG 574
Query: 244 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLE 302
+ VA+K+I K +F + + E+ IL+ L HP I+ ++ F+ E ++V+E
Sbjct: 575 RDVAVKVIDKLRFPTKQESQ------LRNEVAILQSLRHPGIVNLECMFETPEKVFVVME 628
Query: 303 LMEGGELFDKVVGNK--RLKEATCKLYFYQMLLA-------------------------- 334
+ G ++ + ++ ++ RL E K Q+L+A
Sbjct: 629 KLHG-DMLEMILSSEKGRLPERLTKFLITQILVALRHLHFKNIVHCDLKPENVLLASADP 687
Query: 335 ---VQITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 391
V++ DFG ++I+GE S R++ GTP YLAPEVL++ GYNR++D WS+GVI+++
Sbjct: 688 FPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLLN---QGYNRSLDMWSVGVIMYVS 744
Query: 392 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 451
LSG PF+E + DQI + + + W+ +S A+DL+ LL V + R++ +++
Sbjct: 745 LSGTFPFNEDE---DINDQIQNAAFMYPASPWSHISAGAIDLINNLLQVKMRKRYSVDKS 801
Query: 452 LRHPWLQD 459
L HPWLQ+
Sbjct: 802 LSHPWLQE 809
>gi|19923468 protein kinase D2 isoform A [Homo sapiens]
Length = 878
Score = 144 bits (362), Expect = 3e-34
Identities = 93/308 (30%), Positives = 161/308 (52%), Gaps = 55/308 (17%)
Query: 184 NNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTC 243
+ + +++S+S +++ VD +VY + + LGSG G V RKT
Sbjct: 525 HRQASLSISVSNSQI----QENVDIATVY------QIFPDEVLGSGQFGVVYGGKHRKTG 574
Query: 244 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLE 302
+ VA+K+I K +F + + E+ IL+ L HP I+ ++ F+ E ++V+E
Sbjct: 575 RDVAVKVIDKLRFPTKQESQ------LRNEVAILQSLRHPGIVNLECMFETPEKVFVVME 628
Query: 303 LMEGGELFDKVVGNK--RLKEATCKLYFYQMLLA-------------------------- 334
+ G ++ + ++ ++ RL E K Q+L+A
Sbjct: 629 KLHG-DMLEMILSSEKGRLPERLTKFLITQILVALRHLHFKNIVHCDLKPENVLLASADP 687
Query: 335 ---VQITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 391
V++ DFG ++I+GE S R++ GTP YLAPEVL++ GYNR++D WS+GVI+++
Sbjct: 688 FPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLLN---QGYNRSLDMWSVGVIMYVS 744
Query: 392 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 451
LSG PF+E + DQI + + + W+ +S A+DL+ LL V + R++ +++
Sbjct: 745 LSGTFPFNEDE---DINDQIQNAAFMYPASPWSHISAGAIDLINNLLQVKMRKRYSVDKS 801
Query: 452 LRHPWLQD 459
L HPWLQ+
Sbjct: 802 LSHPWLQE 809
>gi|4758128 doublecortin-like kinase 1 [Homo sapiens]
Length = 729
Score = 139 bits (351), Expect = 5e-33
Identities = 88/280 (31%), Positives = 136/280 (48%), Gaps = 40/280 (14%)
Query: 213 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 272
P + + Y + +T+G G VK ER T ++ A+KII K K R + ++
Sbjct: 383 PATITERYKVGRTIGDGNFAVVKECVERSTAREYALKIIKKSK-----CRGKEHM--IQN 435
Query: 273 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 331
E+ IL+++ HP I+ + D + Y+V+EL++GG+LFD + + E Y +
Sbjct: 436 EVSILRRVKHPNIVLLIEEMDVPTELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNL 495
Query: 332 ---------------------LLAVQITDFGHSKILGETSL-------MRTLCGTPTYLA 363
LL + D S LG+ L + T+CGTPTY+A
Sbjct: 496 ASAIKYLHSLNIVHRDIKPENLLVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVA 555
Query: 364 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKYNFIPEV 422
PE++ G Y VD W+ GVI +I L G+PPF Q L DQI G+ +F
Sbjct: 556 PEIIAETG---YGLKVDIWAAGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPY 612
Query: 423 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM 462
W VS+ A +L+ +L+VD RF+ + L HPW+ D+ +
Sbjct: 613 WDNVSDSAKELITMMLLVDVDQRFSAVQVLEHPWVNDDGL 652
>gi|5453882 phosphorylase kinase gamma subunit 1 [Homo sapiens]
Length = 387
Score = 137 bits (344), Expect = 3e-32
Identities = 90/275 (32%), Positives = 142/275 (51%), Gaps = 37/275 (13%)
Query: 218 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKR---KFAIGSAREADPALNVETEI 274
+ Y + LG G V+ + T ++ A+K+I F+ RE A E+
Sbjct: 18 ENYEPKEILGRGVSSVVRRCIHKPTSQEYAVKVIDVTGGGSFSPEEVRELREA--TLKEV 75
Query: 275 EILKKLN-HPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGN------------KRLK 320
+IL+K++ HP II++K+ ++ ++ +V +LM+ GELFD + + L
Sbjct: 76 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKRGELFDYLTEKVTLSEKETRKIMRALL 135
Query: 321 EATCKLYFYQML--------------LAVQITDFGHSKILGETSLMRTLCGTPTYLAPEV 366
E C L+ ++ + +++TDFG S L +R +CGTP+YLAPE+
Sbjct: 136 EVICTLHKLNIVHRDLKPENILLDDNMNIKLTDFGFSCQLEPGERLREVCGTPSYLAPEI 195
Query: 367 L---VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 423
+ ++ GY + VD WS GVI++ L+G PPF HR Q+ + I SG Y F W
Sbjct: 196 IECSMNEDHPGYGKEVDMWSTGVIMYTLLAGSPPFW-HRKQMLMLRMIMSGNYQFGSPEW 254
Query: 424 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 458
+ S+ DLV + LVV P+ R+T EEAL HP+ Q
Sbjct: 255 DDYSDTVKDLVSRFLVVQPQNRYTAEEALAHPFFQ 289
>gi|212549756 calcium/calmodulin-dependent protein kinase II delta
isoform 4 [Homo sapiens]
Length = 489
Score = 135 bits (339), Expect = 1e-31
Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 218 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 277
DEY + + LG GA V+ + T ++ A KII+ +K SAR+ +E E I
Sbjct: 12 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQ---KLEREARIC 65
Query: 278 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 332
+ L HP I+++ + E + Y+V +L+ GGELF+ +V + EA Q+L
Sbjct: 66 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 125
Query: 333 -------------------------LAVQITDFGHS-KILGETSLMRTLCGTPTYLAPEV 366
AV++ DFG + ++ G+ GTP YL+PEV
Sbjct: 126 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 185
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 426
L Y + VD W+ GVIL+I L GYPPF + Q L QI +G Y+F W V
Sbjct: 186 L---RKDPYGKPVDMWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTV 241
Query: 427 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 457
+ +A DL+ K+L ++P R T EAL+HPW+
Sbjct: 242 TPEAKDLINKMLTINPAKRITASEALKHPWI 272
>gi|26667183 calcium/calmodulin-dependent protein kinase II delta
isoform 1 [Homo sapiens]
Length = 478
Score = 135 bits (339), Expect = 1e-31
Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 218 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 277
DEY + + LG GA V+ + T ++ A KII+ +K SAR+ +E E I
Sbjct: 12 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQ---KLEREARIC 65
Query: 278 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 332
+ L HP I+++ + E + Y+V +L+ GGELF+ +V + EA Q+L
Sbjct: 66 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 125
Query: 333 -------------------------LAVQITDFGHS-KILGETSLMRTLCGTPTYLAPEV 366
AV++ DFG + ++ G+ GTP YL+PEV
Sbjct: 126 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 185
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 426
L Y + VD W+ GVIL+I L GYPPF + Q L QI +G Y+F W V
Sbjct: 186 L---RKDPYGKPVDMWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTV 241
Query: 427 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 457
+ +A DL+ K+L ++P R T EAL+HPW+
Sbjct: 242 TPEAKDLINKMLTINPAKRITASEALKHPWI 272
>gi|212549753 calcium/calmodulin-dependent protein kinase II delta
isoform 5 [Homo sapiens]
Length = 492
Score = 135 bits (339), Expect = 1e-31
Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 218 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 277
DEY + + LG GA V+ + T ++ A KII+ +K SAR+ +E E I
Sbjct: 12 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQ---KLEREARIC 65
Query: 278 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 332
+ L HP I+++ + E + Y+V +L+ GGELF+ +V + EA Q+L
Sbjct: 66 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 125
Query: 333 -------------------------LAVQITDFGHS-KILGETSLMRTLCGTPTYLAPEV 366
AV++ DFG + ++ G+ GTP YL+PEV
Sbjct: 126 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 185
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 426
L Y + VD W+ GVIL+I L GYPPF + Q L QI +G Y+F W V
Sbjct: 186 L---RKDPYGKPVDMWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTV 241
Query: 427 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 457
+ +A DL+ K+L ++P R T EAL+HPW+
Sbjct: 242 TPEAKDLINKMLTINPAKRITASEALKHPWI 272
>gi|26667186 calcium/calmodulin-dependent protein kinase II delta
isoform 1 [Homo sapiens]
Length = 478
Score = 135 bits (339), Expect = 1e-31
Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 218 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 277
DEY + + LG GA V+ + T ++ A KII+ +K SAR+ +E E I
Sbjct: 12 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQ---KLEREARIC 65
Query: 278 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 332
+ L HP I+++ + E + Y+V +L+ GGELF+ +V + EA Q+L
Sbjct: 66 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 125
Query: 333 -------------------------LAVQITDFGHS-KILGETSLMRTLCGTPTYLAPEV 366
AV++ DFG + ++ G+ GTP YL+PEV
Sbjct: 126 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 185
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 426
L Y + VD W+ GVIL+I L GYPPF + Q L QI +G Y+F W V
Sbjct: 186 L---RKDPYGKPVDMWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTV 241
Query: 427 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 457
+ +A DL+ K+L ++P R T EAL+HPW+
Sbjct: 242 TPEAKDLINKMLTINPAKRITASEALKHPWI 272
>gi|26667189 calcium/calmodulin-dependent protein kinase II delta
isoform 2 [Homo sapiens]
Length = 478
Score = 135 bits (339), Expect = 1e-31
Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 218 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 277
DEY + + LG GA V+ + T ++ A KII+ +K SAR+ +E E I
Sbjct: 12 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQ---KLEREARIC 65
Query: 278 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 332
+ L HP I+++ + E + Y+V +L+ GGELF+ +V + EA Q+L
Sbjct: 66 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 125
Query: 333 -------------------------LAVQITDFGHS-KILGETSLMRTLCGTPTYLAPEV 366
AV++ DFG + ++ G+ GTP YL+PEV
Sbjct: 126 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 185
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 426
L Y + VD W+ GVIL+I L GYPPF + Q L QI +G Y+F W V
Sbjct: 186 L---RKDPYGKPVDMWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTV 241
Query: 427 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 457
+ +A DL+ K+L ++P R T EAL+HPW+
Sbjct: 242 TPEAKDLINKMLTINPAKRITASEALKHPWI 272
>gi|26667180 calcium/calmodulin-dependent protein kinase II delta
isoform 3 [Homo sapiens]
Length = 499
Score = 135 bits (339), Expect = 1e-31
Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 41/271 (15%)
Query: 218 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 277
DEY + + LG GA V+ + T ++ A KII+ +K SAR+ +E E I
Sbjct: 12 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQ---KLEREARIC 65
Query: 278 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 332
+ L HP I+++ + E + Y+V +L+ GGELF+ +V + EA Q+L
Sbjct: 66 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 125
Query: 333 -------------------------LAVQITDFGHS-KILGETSLMRTLCGTPTYLAPEV 366
AV++ DFG + ++ G+ GTP YL+PEV
Sbjct: 126 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 185
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 426
L Y + VD W+ GVIL+I L GYPPF + Q L QI +G Y+F W V
Sbjct: 186 L---RKDPYGKPVDMWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTV 241
Query: 427 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 457
+ +A DL+ K+L ++P R T EAL+HPW+
Sbjct: 242 TPEAKDLINKMLTINPAKRITASEALKHPWI 272
>gi|26667199 calcium/calmodulin-dependent protein kinase II gamma
isoform 3 [Homo sapiens]
Length = 518
Score = 133 bits (334), Expect = 4e-31
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 41/271 (15%)
Query: 218 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 277
D+Y + + LG GA V+ ++ + ++ A KII+ +K SAR+ +E E I
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKL---SARDHQ---KLEREARIC 65
Query: 278 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 332
+ L HP I+++ + E + Y+V +L+ GGELF+ +V + EA +Q+L
Sbjct: 66 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 125
Query: 333 -------------------------LAVQITDFGHS-KILGETSLMRTLCGTPTYLAPEV 366
AV++ DFG + ++ GE GTP YL+PEV
Sbjct: 126 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 185
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 426
L Y + VD W+ GVIL+I L GYPPF + Q L QI +G Y+F W V
Sbjct: 186 L---RKDPYGKPVDIWACGVILYILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSPEWDTV 241
Query: 427 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 457
+ +A +L+ ++L ++P R T ++AL+HPW+
Sbjct: 242 TPEAKNLINQMLTINPAKRITADQALKHPWV 272
>gi|26667191 calcium/calmodulin-dependent protein kinase II gamma
isoform 4 [Homo sapiens]
Length = 495
Score = 133 bits (334), Expect = 4e-31
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 41/271 (15%)
Query: 218 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 277
D+Y + + LG GA V+ ++ + ++ A KII+ +K SAR+ +E E I
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKL---SARDHQ---KLEREARIC 65
Query: 278 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 332
+ L HP I+++ + E + Y+V +L+ GGELF+ +V + EA +Q+L
Sbjct: 66 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 125
Query: 333 -------------------------LAVQITDFGHS-KILGETSLMRTLCGTPTYLAPEV 366
AV++ DFG + ++ GE GTP YL+PEV
Sbjct: 126 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 185
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 426
L Y + VD W+ GVIL+I L GYPPF + Q L QI +G Y+F W V
Sbjct: 186 L---RKDPYGKPVDIWACGVILYILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSPEWDTV 241
Query: 427 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 457
+ +A +L+ ++L ++P R T ++AL+HPW+
Sbjct: 242 TPEAKNLINQMLTINPAKRITADQALKHPWV 272
>gi|26667211 calcium/calmodulin-dependent protein kinase II gamma
isoform 6 [Homo sapiens]
Length = 504
Score = 133 bits (334), Expect = 4e-31
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 41/271 (15%)
Query: 218 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 277
D+Y + + LG GA V+ ++ + ++ A KII+ +K SAR+ +E E I
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKL---SARDHQ---KLEREARIC 65
Query: 278 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 332
+ L HP I+++ + E + Y+V +L+ GGELF+ +V + EA +Q+L
Sbjct: 66 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 125
Query: 333 -------------------------LAVQITDFGHS-KILGETSLMRTLCGTPTYLAPEV 366
AV++ DFG + ++ GE GTP YL+PEV
Sbjct: 126 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 185
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 426
L Y + VD W+ GVIL+I L GYPPF + Q L QI +G Y+F W V
Sbjct: 186 L---RKDPYGKPVDIWACGVILYILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSPEWDTV 241
Query: 427 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 457
+ +A +L+ ++L ++P R T ++AL+HPW+
Sbjct: 242 TPEAKNLINQMLTINPAKRITADQALKHPWV 272
>gi|26667203 calcium/calmodulin-dependent protein kinase II gamma
isoform 1 [Homo sapiens]
Length = 556
Score = 133 bits (334), Expect = 4e-31
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 41/271 (15%)
Query: 218 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 277
D+Y + + LG GA V+ ++ + ++ A KII+ +K SAR+ +E E I
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKL---SARDHQ---KLEREARIC 65
Query: 278 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 332
+ L HP I+++ + E + Y+V +L+ GGELF+ +V + EA +Q+L
Sbjct: 66 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 125
Query: 333 -------------------------LAVQITDFGHS-KILGETSLMRTLCGTPTYLAPEV 366
AV++ DFG + ++ GE GTP YL+PEV
Sbjct: 126 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 185
Query: 367 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 426
L Y + VD W+ GVIL+I L GYPPF + Q L QI +G Y+F W V
Sbjct: 186 L---RKDPYGKPVDIWACGVILYILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSPEWDTV 241
Query: 427 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 457
+ +A +L+ ++L ++P R T ++AL+HPW+
Sbjct: 242 TPEAKNLINQMLTINPAKRITADQALKHPWV 272
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,650,941
Number of Sequences: 37866
Number of extensions: 889330
Number of successful extensions: 7753
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 345
Number of HSP's that attempted gapping in prelim test: 4749
Number of HSP's gapped (non-prelim): 1767
length of query: 514
length of database: 18,247,518
effective HSP length: 107
effective length of query: 407
effective length of database: 14,195,856
effective search space: 5777713392
effective search space used: 5777713392
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.